Citrus Sinensis ID: 042288
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | 2.2.26 [Sep-21-2011] | |||||||
| O80437 | 501 | Glycerol-3-phosphate 2-O- | yes | no | 0.951 | 0.978 | 0.541 | 1e-153 | |
| Q5XF03 | 500 | Probable glycerol-3-phosp | no | no | 0.937 | 0.966 | 0.550 | 1e-145 | |
| Q9CAY3 | 502 | Glycerol-3-phosphate acyl | no | no | 0.910 | 0.934 | 0.541 | 1e-144 | |
| Q9LMM0 | 503 | Glycerol-3-phosphate 2-O- | no | no | 0.937 | 0.960 | 0.537 | 1e-143 | |
| Q9LHS7 | 500 | Glycerol-3-phosphate acyl | no | no | 0.902 | 0.93 | 0.533 | 1e-139 | |
| Q9SHJ5 | 585 | Glycerol-3-phosphate acyl | no | no | 0.904 | 0.796 | 0.460 | 1e-119 | |
| Q9FZ22 | 530 | Probable glycerol-3-phosp | no | no | 0.914 | 0.888 | 0.401 | 1e-96 | |
| Q9SYJ2 | 520 | Probable glycerol-3-phosp | no | no | 0.895 | 0.886 | 0.409 | 8e-95 | |
| P0CAV6 | 222 | Protein CicA OS=Caulobact | yes | no | 0.388 | 0.900 | 0.290 | 0.0004 | |
| B8GX15 | 222 | Protein CicA OS=Caulobact | yes | no | 0.388 | 0.900 | 0.290 | 0.0004 |
| >sp|O80437|GPAT6_ARATH Glycerol-3-phosphate 2-O-acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 540 bits (1391), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/495 (54%), Positives = 357/495 (72%), Gaps = 5/495 (1%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
F I KC R TV AD+DGTLL RS+FPY+ LVA E G +LR L+LL+ P
Sbjct: 9 RFEQISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVY 68
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
Y +SE+ I V +F TFAG+K+ +E V R+VLP+FY+ D+ P+TWR+F++ G+R +
Sbjct: 69 LTYLTISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYI 128
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGD 192
+TA+PRIMVE F+K FLG D V+GTE+ V K GR+TGF + PG+LVG+ K +++ G
Sbjct: 129 ITASPRIMVEPFVKTFLGVDKVLGTELEVSKSGRATGFTRKPGILVGQYKRDVVLREFGG 188
Query: 193 -DEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTP 251
++PD+GLGD KTD F+++CKE YMVP K +P+ ++KL PI+FH+GRLVQ+PTP
Sbjct: 189 LASDLPDLGLGDSKTDHDFMSICKEGYMVP-RTKCEPLPRNKLLSPIIFHEGRLVQRPTP 247
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQT 311
+ALLT LW+PVGF+L+ +R+ LP + Y + G+++ + G PPPP +
Sbjct: 248 LVALLTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKPGQPGH 307
Query: 312 GVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEK 371
L +C+HRT+LDP+ + ALGR I VTYS+S+ SELISPIK V LTR R DA+ I++
Sbjct: 308 --LLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKR 365
Query: 372 LLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431
LLE+GDLVICPEGTTCREPFLLRFSALFAELTD +VPVA++ + SMF+GTT RG+K +DP
Sbjct: 366 LLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDP 425
Query: 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491
++ FMNP P YE+TFL ++P ELTC GKS +VANYIQR++ +L +ECT+FTRKDKY
Sbjct: 426 YFAFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYA 485
Query: 492 ALAGNDGTVVEKPAK 506
LAG DG V K K
Sbjct: 486 MLAGTDGRVPVKKEK 500
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/492 (55%), Positives = 350/492 (71%), Gaps = 9/492 (1%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPL 71
S NFP I +C E D++ AD+DGTLL RSSFPYF LVA E G +LR L+LLL P
Sbjct: 7 SQNFPPITECRD--GEYDSIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPF 64
Query: 72 AGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
Y +VSES GI++LIF +FAG+K+ IE V+RAVLP+FY+ D+ +++ VF C R+
Sbjct: 65 VIISYLFVSESLGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRK 124
Query: 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVY--KGRSTGFVKSPGVLVGKNKAGALMKM 189
V+TANP +MVEAF+KD+LG D V+GTEI V R+TGFVK PGVLVG K A++K
Sbjct: 125 VVVTANPIVMVEAFVKDYLGGDKVLGTEIEVNPKTNRATGFVKKPGVLVGDLKRLAILKE 184
Query: 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKP 249
G+ E PD+GLGDR +D F++LCK+ YMV + +++L IVFHDGRL Q+P
Sbjct: 185 FGN--ESPDLGLGDRTSDHDFMSLCKKGYMVHATKSATTIPKERLKNRIVFHDGRLAQRP 242
Query: 250 TPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSG 309
TP A++T LW+P GF+L+ +R+ LP V Y + LG+ + I+G PPP S G
Sbjct: 243 TPLNAIITYLWLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPP--SPG 300
Query: 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMI 369
G L++ +HRT LDPI ++ ALGR I VTYS+SRLS ++SPI V LTRDRATDA+ +
Sbjct: 301 TLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANM 360
Query: 370 EKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGM 429
KLLEKGDLVICPEGTTCRE +LLRFSALFAEL+D +VPVAM+ + MF+GTT RG K
Sbjct: 361 RKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFW 420
Query: 430 DPFYFFMNPSPAYEVTFLNKLPYELTCS-AGKSSHDVANYIQRLIATSLSYECTSFTRKD 488
DP++FFMNP P+YE TFL++LP E+T + GK+ +VANY+Q++I L +ECT TRKD
Sbjct: 421 DPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKD 480
Query: 489 KYRALAGNDGTV 500
KY L GNDG V
Sbjct: 481 KYLLLGGNDGKV 492
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9CAY3|GPAT5_ARATH Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/482 (54%), Positives = 338/482 (70%), Gaps = 13/482 (2%)
Query: 25 GREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAG 84
G +VV++ +GT+L+ SF YF LVAFE G++R +LL L P+ L + ++A
Sbjct: 7 GTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAA 66
Query: 85 IRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEA 144
+++ IF G++ P IESVARAVLPKFY D+ +TWRVFSSC +R V+T PR+MVE
Sbjct: 67 LKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVER 126
Query: 145 FLKDFLGADMVIGTEICVYK-GRSTGFVKSPGV-LVGKNKAGALMKMLGDDEEMPDIGLG 202
F K+ L AD VIGTE+ V + G TG ++ V N+ L +G P +GLG
Sbjct: 127 FAKEHLRADEVIGTELIVNRFGFVTGLIRETDVDQSALNRVANLF--VG---RRPQLGLG 181
Query: 203 D--RKTDSLFLNLCKESYMVP-PNPKVDPVSQDKL-PKPIVFHDGRLVQKPTPFMALLTI 258
+ FL+LC+E P P Q +L P P++FHDGRLV++PTP AL+ +
Sbjct: 182 KPALTASTNFLSLCEEHIHAPIPENYNHGDQQLQLRPLPVIFHDGRLVKRPTPATALIIL 241
Query: 259 LWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICS 318
LWIP G +LA +R+ GA+LP+ Y G + +KG PP P ++G++GVLF+C+
Sbjct: 242 LWIPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPP--AAGKSGVLFVCT 299
Query: 319 HRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDL 378
HRTL+DP+ LS LGR IPAVTYS+SRLSE++SPI TVRLTR R DA+ I++ L KGDL
Sbjct: 300 HRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDL 359
Query: 379 VICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP 438
V+CPEGTTCREPFLLRFSALFAELTD +VPVAM+ R+ FH TTARGWKG+DP +FFMNP
Sbjct: 360 VVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNP 419
Query: 439 SPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDG 498
P YE+TFLN+LP E TCS+GKS HDVANY+QR++A +L +ECT+FTRKDKYR LAGNDG
Sbjct: 420 RPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479
Query: 499 TV 500
TV
Sbjct: 480 TV 481
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMM0|GPAT4_ARATH Glycerol-3-phosphate 2-O-acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/493 (53%), Positives = 344/493 (69%), Gaps = 10/493 (2%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPL 71
S +FP I +C S RE D++ AD+DGTLL RSSFPYF LVA E G + R L+LLL P+
Sbjct: 7 SRSFPPISECKS--REYDSIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPI 64
Query: 72 AGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
Y +VSES GI++LIF +FAG+K+ +IE V+RAVL +FY+ D+ +++ VF C +R
Sbjct: 65 VIIAYLFVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKR 124
Query: 132 -CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKG--RSTGFVKSPGVLVGKNKAGALMK 188
V+TANP +MVE F+KD+LG D V+GTEI V ++TGFVK PGVLVG K A++K
Sbjct: 125 KVVVTANPIVMVEPFVKDYLGGDKVLGTEIEVNPKTMKATGFVKKPGVLVGDLKRLAILK 184
Query: 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQK 248
GDD PD+GLGDR +D F+++CKE YMV V + L I+FHDGRLVQ+
Sbjct: 185 EFGDDS--PDLGLGDRTSDHDFMSICKEGYMVHETKSATTVPIESLKNRIIFHDGRLVQR 242
Query: 249 PTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSS 308
PTP AL+ LW+P GF+L+ R+ LP V Y + LG+ + I+G PPP
Sbjct: 243 PTPLNALIIYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPPSPGK 302
Query: 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASM 368
L++ +HRT LDPI ++ ALGR I VTYS+SRLS ++SPI V LTRDR DA+
Sbjct: 303 PGN--LYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAAR 360
Query: 369 IEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKG 428
+ +LLEKGDLVICPEGTTCREP+LLRFSALFAEL+D +VPVAM+ + MF+GTT RG K
Sbjct: 361 MRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKF 420
Query: 429 MDPFYFFMNPSPAYEVTFLNKLPYELTCS-AGKSSHDVANYIQRLIATSLSYECTSFTRK 487
DP++FFMNP P+YE TFL++LP E+T + GK+ +VANY+Q++I L +ECT TRK
Sbjct: 421 WDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRK 480
Query: 488 DKYRALAGNDGTV 500
DKY L GNDG V
Sbjct: 481 DKYLLLGGNDGKV 493
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LHS7|GPAT7_ARATH Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/476 (53%), Positives = 326/476 (68%), Gaps = 11/476 (2%)
Query: 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLI 89
+VV++++GTLL+ F YF LVAFE G++R LL L P+ L + ++++I
Sbjct: 10 SVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLMI 69
Query: 90 FATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDF 149
F AG+ IESVARAVLPKF+ D+ + WR F SC +R V+T PR+MVE F KD
Sbjct: 70 FVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKDH 129
Query: 150 LGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRK-TD 207
L AD VIGTEI V + G +TG ++ V ++ ++ + D P +GLG +D
Sbjct: 130 LSADEVIGTEIVVNRFGYATGLIQETNV--DQSVFNSVANLFVDRR--PQLGLGRHIISD 185
Query: 208 S-LFLNLCKESYMVPPNPKVDPVSQ--DKLPKPIVFHDGRLVQKPTPFMALLTILWIPVG 264
S FL+LC+E P + +Q P P++FHDGRLV+ PTP AL+ +LWIP G
Sbjct: 186 SPTFLSLCEEQVHAPVPSNYNGHNQRLHVQPLPVIFHDGRLVKLPTPATALIILLWIPFG 245
Query: 265 FLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLD 324
+LA +R+ G LLP+ + Y R +KG PP AQ ++G GVLF+C+HRTL+D
Sbjct: 246 IILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPP--AQATTGNPGVLFVCTHRTLMD 303
Query: 325 PIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEG 384
P+ LS LGR IPAVTYS+SRLSE++SPI T RLTR R DA MI+K L GDLV+ PEG
Sbjct: 304 PVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEG 363
Query: 385 TTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEV 444
TTCREPFLLRFSALFAELTD +VPVAM+ R+ FH TTARGWKG+DP +FFMNP P YEV
Sbjct: 364 TTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEV 423
Query: 445 TFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTV 500
TFLN+L E TCS+GKS +DVANY+QR++A +L +ECT+FTRKDKYR LAGNDGTV
Sbjct: 424 TFLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 479
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHJ5|GPAT1_ARATH Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/489 (46%), Positives = 321/489 (65%), Gaps = 23/489 (4%)
Query: 28 KDTVVADVDGTLLRGRSS------FPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSE 81
+DT D+DG LLR SS FPYF LVAFE G ++R +LLLL FL+ E
Sbjct: 103 RDTFFCDIDGVLLRQHSSKHFHTFFPYFMLVAFEGGSIIRAILLLLS---CSFLWTLQQE 159
Query: 82 SAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRI 140
+ +RVL F TF+G++V +++V+R+VLPKF+ +L+ + + +++ + V T+ P++
Sbjct: 160 TK-LRVLSFITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKVVFTSLPQV 218
Query: 141 MVEAFLKDFLGADMVIGTEICVYK--GRS--TGFVKSPGVLVGKNKAGALMKMLGDDEEM 196
+VE FL++ L AD VIGT++ K GR TG G V K+K+ D ++
Sbjct: 219 LVERFLREHLNADDVIGTKLQEIKVMGRKFYTGLASGSG-FVLKHKSAE--DYFFDSKKK 275
Query: 197 PDIGLGDRKT--DSLFLNLCKESYMVPPNP---KVDPVSQDKLPKPIVFHDGRLVQKPTP 251
P +G+G + D +F+++CKE+Y K + + +++ PKP++FHDGRL PTP
Sbjct: 276 PALGIGSSSSPQDHIFISICKEAYFWNEEESMSKNNALPRERYPKPLIFHDGRLAFLPTP 335
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQT 311
L +W+P+GFLLA R++ G LP + + GVR+ K + G +
Sbjct: 336 LATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGRPEKGNS 395
Query: 312 GVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEK 371
GVL++C+HRTLLDP+FL+T+LG+P+ AVTYSLS+ SE I+P+KTV L RDR D +++
Sbjct: 396 GVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQR 455
Query: 372 LLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431
LL KGDLV+CPEGTTCREP+LLRFS LFAELT+++VPVA+ R+SMF+GTTA G K +DP
Sbjct: 456 LLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKCLDP 515
Query: 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491
+F MNP P Y + L KLP E+TC+ GKSS +VAN+IQ +A L +ECT+ TR+DKY
Sbjct: 516 IFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLTRRDKYL 575
Query: 492 ALAGNDGTV 500
LAGN+G V
Sbjct: 576 VLAGNEGIV 584
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Involved in pollen development, by being required for tapetum differentiation and male fertility. In addition to the sporophytic effect, it also exerts a gametophytic effect on pollen performance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ22|GPAT2_ARATH Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 300/510 (58%), Gaps = 39/510 (7%)
Query: 19 DKCASIGREK------DTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLA 72
KC S G + T++ +V+G LL+ S FPYF +VAFE GGV+R L LL+L P
Sbjct: 35 QKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLLVLYPFI 94
Query: 73 GFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRC 132
+ Y G++ ++ +F G+K S V ++VLPK++ D+ E ++V G+R
Sbjct: 95 SLMSY----EMGLKTMVMLSFFGVKKESFR-VGKSVLPKYFLEDVGLEMFQVLKRGGKRV 149
Query: 133 VLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192
++ P++M++ FL+D+L ++V+G ++ + G G V+ KN A K++ +
Sbjct: 150 AVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIVEDK-----KNLEIAFDKVVQE 204
Query: 193 DEEMPDIGLGDR----------KTDSLFLNLCKESYMVPPNPKV--DPVSQDKLPKPIVF 240
+ +G G R SLF C+E Y V + K + QD+ PKP++F
Sbjct: 205 ER----LGSGRRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPQDQYPKPLIF 260
Query: 241 HDGRLVQKPTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTP 300
HDGRL KPTP L+ +W P +LA R+ G LP L G+ + +
Sbjct: 261 HDGRLAVKPTPLNTLVLFMWAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNN 320
Query: 301 PPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYSLSRLSELISPIKTVRLT 359
+ + G LF+C+HRTLLDP+++S AL + + AVTYSLSRLSEL++PIKTVRLT
Sbjct: 321 HNDLISADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLT 380
Query: 360 RDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFH 419
RDR D +EKLL +GDLV+CPEGTTCREP+LLRFS LF+E+ D +VPVA+ + ++ F+
Sbjct: 381 RDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFY 440
Query: 420 GTTARGWKGMDPFYFFMNPSPAYEVTFLNKL--PYELTCSA----GKSSHDVANYIQRLI 473
GTTA G K DP +F +NP P+Y V L+ + TC GK + +VAN++Q I
Sbjct: 441 GTTASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQHEI 500
Query: 474 ATSLSYECTSFTRKDKYRALAGNDGTVVEK 503
+L +ECT+ TR+DKY LAGN+G V +K
Sbjct: 501 GNALGFECTNLTRRDKYLILAGNNGVVKKK 530
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYJ2|GPAT3_ARATH Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 348 bits (892), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/486 (40%), Positives = 287/486 (59%), Gaps = 25/486 (5%)
Query: 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRV 87
+ T++ +V+G LL+ S FPYF LVAFE GGV+R LL +L PL + S G++V
Sbjct: 44 RHTLIFNVEGALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLISLM----SHEMGVKV 99
Query: 88 LIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTAN-PRIMVEAFL 146
++ +F G+K + RAVLPK++ D+ E + V G++ ++ + P++M+E FL
Sbjct: 100 MVMVSFFGIKKEGFRA-GRAVLPKYFLEDVGLEMFEVLKRGGKKIGVSDDLPQVMIEGFL 158
Query: 147 KDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD---IGLGD 203
+D+L D+V+G E+ V G G ++ K K + L E + IG+
Sbjct: 159 RDYLEIDVVVGREMKVVGGYYLG------IMEDKTKHDLVFDELVRKERLNTGRVIGITS 212
Query: 204 RKTD---SLFLNLCKESYMVPPNPKV--DPVSQDKLPKPIVFHDGRLVQKPTPFMALLTI 258
T LF C+E Y V + K + + + PKP++FHDGRL KPT L+
Sbjct: 213 FNTSLHRYLFSQFCQEIYFVKKSDKRSWQTLPRSQYPKPLIFHDGRLAIKPTLMNTLVLF 272
Query: 259 LWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGT-PPPPAQKSSGQTGVLFIC 317
+W P A R+ +P L G R+ + QK S + G LF+C
Sbjct: 273 MWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVC 332
Query: 318 SHRTLLDPIFLSTAL-GRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKG 376
+HRTLLDP++++ AL + I VTYSLSR+SE+++PIKTVRLTRDR +D +EKLL +G
Sbjct: 333 NHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEG 392
Query: 377 DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFM 436
DLV+CPEGTTCREP+LLRFS LF E++D +VPVA++ ++ F+GTTA G K +DP +F +
Sbjct: 393 DLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLL 452
Query: 437 NPSPAYEVTFLNKLPYELTCS--AGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALA 494
+P P Y + FL+ + TC GK +VAN +Q I +L +ECTS TRKDKY LA
Sbjct: 453 DPYPTYTIQFLDPVS-GATCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILA 511
Query: 495 GNDGTV 500
GN+G V
Sbjct: 512 GNNGVV 517
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P0CAV6|CICA_CAUCR Protein CicA OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=cicA PE=4 SV=1 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 27/227 (11%)
Query: 1 MAKPEELDYGDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVG--- 57
MAK + G S + P +G E V D DGTL + SF F + + G
Sbjct: 1 MAKRSWMAKGLSASRPM---TGEMGHEPLLVAFDFDGTLTV-KDSFNAF--LKWRAGPRW 54
Query: 58 --GVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATF-AGMKVPSIESVARAVLPKFYS 114
GVLRL L+ Y + ++ F G V IE+ ARA F
Sbjct: 55 SFGVLRLTPALIA-------YVFDRNRGKLKAAAVRQFLKGATVAQIENDARAFAEAFAP 107
Query: 115 GDLHPET---WRVFSSCGRRCVL-TANPRIMVEAFLKDFLGADMVIGTEI-CVYKGRSTG 169
L P+ WR + + G + V+ TA+P ++V F + LGAD++IGT + C GR G
Sbjct: 108 SLLRPDAVAVWRGWRAKGAKMVIVTASPDLIVAPFARG-LGADLLIGTRLRCSDDGRILG 166
Query: 170 FVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKE 216
+ K K L ++ G D + GD D+ L + E
Sbjct: 167 GLDGNNCRA-KEKVIRLREVFGPDVRLT-AAYGDTSGDTEMLAIADE 211
|
Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650) |
| >sp|B8GX15|CICA_CAUCN Protein CicA OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=cicA PE=4 SV=1 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 27/227 (11%)
Query: 1 MAKPEELDYGDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVG--- 57
MAK + G S + P +G E V D DGTL + SF F + + G
Sbjct: 1 MAKRSWMAKGLSASRPM---TGEMGHEPLLVAFDFDGTLTV-KDSFNAF--LKWRAGPRW 54
Query: 58 --GVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATF-AGMKVPSIESVARAVLPKFYS 114
GVLRL L+ Y + ++ F G V IE+ ARA F
Sbjct: 55 SFGVLRLTPALIA-------YVFDRNRGKLKAAAVRQFLKGATVAQIENDARAFAEAFAP 107
Query: 115 GDLHPET---WRVFSSCGRRCVL-TANPRIMVEAFLKDFLGADMVIGTEI-CVYKGRSTG 169
L P+ WR + + G + V+ TA+P ++V F + LGAD++IGT + C GR G
Sbjct: 108 SLLRPDAVAVWRGWRAKGAKMVIVTASPDLIVAPFARG-LGADLLIGTRLRCSDDGRILG 166
Query: 170 FVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKE 216
+ K K L ++ G D + GD D+ L + E
Sbjct: 167 GLDGNNCRA-KEKVIRLREVFGPDVRLT-AAYGDTSGDTEMLAIADE 211
|
Caulobacter crescentus (strain NA1000 / CB15N) (taxid: 565050) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | ||||||
| 224138190 | 501 | predicted protein [Populus trichocarpa] | 0.968 | 0.996 | 0.826 | 0.0 | |
| 225452611 | 510 | PREDICTED: glycerol-3-phosphate acyltran | 0.965 | 0.974 | 0.839 | 0.0 | |
| 224091505 | 501 | predicted protein [Populus trichocarpa] | 0.968 | 0.996 | 0.822 | 0.0 | |
| 255558288 | 504 | ER glycerol-phosphate acyltransferase [R | 0.968 | 0.990 | 0.812 | 0.0 | |
| 388894442 | 526 | required for arbuscular mycorrhization 2 | 0.970 | 0.950 | 0.788 | 0.0 | |
| 449459508 | 511 | PREDICTED: glycerol-3-phosphate 2-O-acyl | 0.963 | 0.970 | 0.803 | 0.0 | |
| 255552790 | 512 | ER glycerol-phosphate acyltransferase [R | 0.990 | 0.996 | 0.781 | 0.0 | |
| 357439161 | 568 | ER glycerol-phosphate acyltransferase [M | 0.970 | 0.880 | 0.788 | 0.0 | |
| 356577516 | 512 | PREDICTED: glycerol-3-phosphate acyltran | 0.970 | 0.976 | 0.788 | 0.0 | |
| 356533281 | 509 | PREDICTED: glycerol-3-phosphate acyltran | 0.970 | 0.982 | 0.786 | 0.0 |
| >gi|224138190|ref|XP_002322752.1| predicted protein [Populus trichocarpa] gi|222867382|gb|EEF04513.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/502 (82%), Positives = 462/502 (92%), Gaps = 3/502 (0%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
+FPT+DKCASIGREK TVVAD+DGTLLRGRSSFPYFAL+AFE GG+ RL+ LLL SPLAG
Sbjct: 3 SFPTVDKCASIGREKHTVVADMDGTLLRGRSSFPYFALLAFEAGGIFRLIFLLLASPLAG 62
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
LYY+VSESAGI+VLIFAT AGMKV IESVARAVLPKFYS DLH E+WRVFSSCG+RCV
Sbjct: 63 LLYYFVSESAGIKVLIFATCAGMKVSDIESVARAVLPKFYSSDLHSESWRVFSSCGKRCV 122
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPRIMVEAFLKDFLGAD+V+GTE+ YKGR+TGFV+SPGVLVGKNKA AL K G
Sbjct: 123 LTANPRIMVEAFLKDFLGADLVLGTEMSTYKGRATGFVQSPGVLVGKNKADALKKAFGMT 182
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
+ P+IGLGDR TD+ F+ LCKE Y+VPP P+V+ V+ DKLPKP++FHDGRLVQKPTP
Sbjct: 183 Q--PEIGLGDRHTDAPFMALCKEGYIVPPKPEVEAVTTDKLPKPVIFHDGRLVQKPTPLS 240
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGV 313
ALLTILWIP+GF+LACLR+AAG+LLPMP+VYYAFWALGVRV IKGTPPPPA+KS GQ+GV
Sbjct: 241 ALLTILWIPIGFILACLRIAAGSLLPMPMVYYAFWALGVRVIIKGTPPPPAKKSIGQSGV 300
Query: 314 LFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLL 373
LFICSHRTLLDPIFLSTALGRPIPAVTYS+SRLSE+ISPIKTVRL+RDRATDASMI+KLL
Sbjct: 301 LFICSHRTLLDPIFLSTALGRPIPAVTYSVSRLSEIISPIKTVRLSRDRATDASMIKKLL 360
Query: 374 EKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433
E+GDL ICPEGTTCREPFLLRFSALFAELTD++VPVA+ NRMSMFHGTTARGWKGMDPFY
Sbjct: 361 EEGDLAICPEGTTCREPFLLRFSALFAELTDQLVPVAVVNRMSMFHGTTARGWKGMDPFY 420
Query: 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRAL 493
FFMNPSPAYEVTFLN+LP ELTC+ GKSSH+VANYIQR+IA +LSYECTSFTR+DKYRAL
Sbjct: 421 FFMNPSPAYEVTFLNRLPQELTCTGGKSSHEVANYIQRVIAATLSYECTSFTRRDKYRAL 480
Query: 494 AGNDGTVVEKPAKLAANKIMGC 515
AGNDGTVVEK KL ANK+MGC
Sbjct: 481 AGNDGTVVEK-TKLQANKVMGC 501
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452611|ref|XP_002276032.1| PREDICTED: glycerol-3-phosphate acyltransferase 6 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/499 (83%), Positives = 457/499 (91%), Gaps = 2/499 (0%)
Query: 17 TIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLY 76
TID+C SIGREK+TVVAD+DGTLLRGRSSFPYFALVAFEVGG+ RLLLLLL SPLAG LY
Sbjct: 14 TIDQCTSIGREKETVVADMDGTLLRGRSSFPYFALVAFEVGGIFRLLLLLLCSPLAGVLY 73
Query: 77 YYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTA 136
Y++SE AGI+VLIFATF GMKV IESVARAVLPKFY+ DLHPE WRVFSSCG+RCVLTA
Sbjct: 74 YFISEPAGIQVLIFATFVGMKVSDIESVARAVLPKFYASDLHPEAWRVFSSCGKRCVLTA 133
Query: 137 NPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM 196
NPRIMVEAFLKDFLGADMV+GTE+ YKGR+TG V+ GVLVGK KA AL + +
Sbjct: 134 NPRIMVEAFLKDFLGADMVLGTEVDTYKGRATGLVRGGGVLVGKRKAEALRNAF-SETSL 192
Query: 197 PDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFMALL 256
P+IGLGDR+TD F++LCKESY+VP P+V+ VS DKLPKPIVFHDGRLVQKPTPFMALL
Sbjct: 193 PEIGLGDRETDYPFMSLCKESYIVPAKPEVEAVSHDKLPKPIVFHDGRLVQKPTPFMALL 252
Query: 257 TILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFI 316
TILWIPVGFLLACLR+AAGALLPMPLVYYAFWALGVRVYIKG PPPPA+KS GQ+GVLFI
Sbjct: 253 TILWIPVGFLLACLRIAAGALLPMPLVYYAFWALGVRVYIKGNPPPPAKKSIGQSGVLFI 312
Query: 317 CSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKG 376
CSHRTLLDPIFLS ALGRPIPAVTYSLSRLSE ISPIKTVRL+RDRATDA+MI+KLLE G
Sbjct: 313 CSHRTLLDPIFLSAALGRPIPAVTYSLSRLSEFISPIKTVRLSRDRATDAAMIKKLLEAG 372
Query: 377 DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFM 436
DL ICPEGTTCREPFLLRFSALF+ELTDE+VPVAM+NRM+MFHGTTARGWKGMDPFY+FM
Sbjct: 373 DLAICPEGTTCREPFLLRFSALFSELTDELVPVAMANRMTMFHGTTARGWKGMDPFYYFM 432
Query: 437 NPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGN 496
NPSPAYEV FLNKLP+ELTC AGKSSHDVANYIQR+IA SLSYECT+FTRKDKYRALAGN
Sbjct: 433 NPSPAYEVNFLNKLPHELTCGAGKSSHDVANYIQRMIAASLSYECTNFTRKDKYRALAGN 492
Query: 497 DGTVVEKPAKLAANKIMGC 515
DGTVVEKP K+ ANK+MGC
Sbjct: 493 DGTVVEKP-KVDANKVMGC 510
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091505|ref|XP_002309276.1| predicted protein [Populus trichocarpa] gi|222855252|gb|EEE92799.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/502 (82%), Positives = 458/502 (91%), Gaps = 3/502 (0%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
+FPT+DKCASIGREK +VVAD+DGTLLRGRSSFPYFAL+AFE GG+ RLL LLL SPLAG
Sbjct: 3 SFPTVDKCASIGREKHSVVADMDGTLLRGRSSFPYFALLAFEAGGIFRLLFLLLNSPLAG 62
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
LYY+VSESAGI+VLIFAT AGMK+ IESVARAVLPKFYS DLH E+WRVFSSCG+RCV
Sbjct: 63 LLYYFVSESAGIKVLIFATCAGMKLSDIESVARAVLPKFYSSDLHSESWRVFSSCGKRCV 122
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPRIMVEAFLKDFLGAD+V+GTEI YKGR+TGFV+SPGVLVGKNKA AL K G
Sbjct: 123 LTANPRIMVEAFLKDFLGADLVLGTEILTYKGRATGFVQSPGVLVGKNKADALKKAFGKT 182
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
+ P+IGLGDR TD+ F+ LCKE Y+VPP P+V+ V+ DKLPKP++FHDGRLVQKPTP
Sbjct: 183 Q--PEIGLGDRHTDAPFMALCKEGYIVPPKPEVEAVTTDKLPKPVIFHDGRLVQKPTPLS 240
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGV 313
ALL ILWIP+GF+LACLR+AAG+LLPMP+VYYAFWALGVRV IKGTPPPPA+KS GQ+GV
Sbjct: 241 ALLIILWIPIGFILACLRIAAGSLLPMPMVYYAFWALGVRVNIKGTPPPPAKKSIGQSGV 300
Query: 314 LFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLL 373
LF+CSHRTLLDPIFLSTALGRPIPAVTYSLSRLSE+ISPIKTVRL+RDRA DASMI+KLL
Sbjct: 301 LFVCSHRTLLDPIFLSTALGRPIPAVTYSLSRLSEIISPIKTVRLSRDRAADASMIKKLL 360
Query: 374 EKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433
E+GDL ICPE TTCREPFLLRFSALFAELTDE+VPVAM+NRMSMFHGTTARGWKGMDPFY
Sbjct: 361 EEGDLAICPERTTCREPFLLRFSALFAELTDELVPVAMANRMSMFHGTTARGWKGMDPFY 420
Query: 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRAL 493
FFMNPSPAYEVTFLNKLP ELT S GKSSH+VANYIQR+IA +LSYECTSFTR+DKYRAL
Sbjct: 421 FFMNPSPAYEVTFLNKLPLELTLSGGKSSHEVANYIQRVIAATLSYECTSFTRRDKYRAL 480
Query: 494 AGNDGTVVEKPAKLAANKIMGC 515
AGNDG VVEK K+ ANK+MGC
Sbjct: 481 AGNDGNVVEK-TKVQANKVMGC 501
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558288|ref|XP_002520171.1| ER glycerol-phosphate acyltransferase [Ricinus communis] gi|223540663|gb|EEF42226.1| ER glycerol-phosphate acyltransferase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/502 (81%), Positives = 455/502 (90%), Gaps = 3/502 (0%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
+FP + KCAS GREK TVVAD+DGTL GRSSFPYFAL+AFE GG+ RLL LLL SPLA
Sbjct: 6 SFPEVSKCASKGREKHTVVADMDGTLFIGRSSFPYFALIAFEAGGIFRLLFLLLASPLAA 65
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
LYY+VSESAGI+VLIFA+FAGMKV IESVARAVLPKFYS DLHPE+WRVFSSCG+RCV
Sbjct: 66 LLYYFVSESAGIQVLIFASFAGMKVSDIESVARAVLPKFYSSDLHPESWRVFSSCGKRCV 125
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPRIMVEAFLKDFLGAD+V GTEI YKGR+TGFV++PGVLVGKNKA AL K GD
Sbjct: 126 LTANPRIMVEAFLKDFLGADLVFGTEISTYKGRATGFVRTPGVLVGKNKANALKKAFGDA 185
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
P++GLGDR+TD+ F+ LCKE Y+VPP P+V V+ DKLPKPIVFHDGRLVQKPTP M
Sbjct: 186 R--PEVGLGDRRTDAPFMALCKEGYLVPPKPEVRAVTGDKLPKPIVFHDGRLVQKPTPLM 243
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGV 313
ALL ILWIP+GF+LACLR+AAG+LLPMP+VYYAF ALGVRV +KG PPPPA+KS+GQ+GV
Sbjct: 244 ALLIILWIPIGFILACLRIAAGSLLPMPMVYYAFLALGVRVTVKGNPPPPAKKSTGQSGV 303
Query: 314 LFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLL 373
LF+CSHRTLLDPIFLSTALGRPI AVTYS+SRLSE+ISPIKTVRL+RDRATDA+MI+KLL
Sbjct: 304 LFVCSHRTLLDPIFLSTALGRPIAAVTYSVSRLSEIISPIKTVRLSRDRATDAAMIKKLL 363
Query: 374 EKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433
+GDL ICPEGTTCREPFLLRFSALFAELTD++VPVAM NRMSMFHGTTARGWKGMDPFY
Sbjct: 364 VEGDLAICPEGTTCREPFLLRFSALFAELTDQIVPVAMVNRMSMFHGTTARGWKGMDPFY 423
Query: 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRAL 493
FFMNPSPAYEVTFL+KLP ELTCS+GKSSH+VANYIQR+IA +LSYECT FTRKDKYRAL
Sbjct: 424 FFMNPSPAYEVTFLSKLPQELTCSSGKSSHEVANYIQRVIAATLSYECTGFTRKDKYRAL 483
Query: 494 AGNDGTVVEKPAKLAANKIMGC 515
AGNDG+VVEKP KL ANK+MGC
Sbjct: 484 AGNDGSVVEKP-KLEANKVMGC 504
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388894442|gb|AFK81970.1| required for arbuscular mycorrhization 2 [Medicago truncatula] gi|388894446|gb|AFK81972.1| required for arbuscular mycorrhization 2 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/506 (78%), Positives = 447/506 (88%), Gaps = 6/506 (1%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPL 71
S FPT++KC SIGREK TVVAD+DGTLL GRSSFPYFAL+AFEVGGVLRLL+ LL SP+
Sbjct: 25 SSTFPTVNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALIAFEVGGVLRLLIYLLASPI 84
Query: 72 AGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
A LYY++SESAGI+VL+FA+ AGMK+ SIESVARAVLPKFYS DLHPETWRVFSSCG+R
Sbjct: 85 AAILYYFISESAGIQVLVFASMAGMKLSSIESVARAVLPKFYSSDLHPETWRVFSSCGKR 144
Query: 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191
CVLTANPRIMVE FLK+FLGADMV+GTEI YKGR+TG + PG+LVG KA L K G
Sbjct: 145 CVLTANPRIMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGDKKAQVLKKTFG 204
Query: 192 DDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTP 251
D E PDIGLGDR TD+ F+ LCKE Y+VP PKV V+ DKLPKPI+FHDGRLVQKPTP
Sbjct: 205 D--EKPDIGLGDRVTDAPFMALCKEGYIVPAKPKVTTVTSDKLPKPIIFHDGRLVQKPTP 262
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQ--KSSG 309
MALL ILWIP+GF LACLR+AAG+LLPM VY AF ALGVRV +KGTPPPP + K++
Sbjct: 263 LMALLIILWIPIGFPLACLRIAAGSLLPMKFVYCAFKALGVRVIVKGTPPPPVETSKTNH 322
Query: 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMI 369
Q+GVLFICSHRTLLDPIFLSTALGR IPAVTYS+SRLSE+ISPIKTVRL+RDRATDA+MI
Sbjct: 323 QSGVLFICSHRTLLDPIFLSTALGRAIPAVTYSVSRLSEIISPIKTVRLSRDRATDAAMI 382
Query: 370 EKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGM 429
+KLL++GDL ICPEGTTCREPFLLRFSALFAELTDE+VPVAM NRMSMFHGTTARGWKGM
Sbjct: 383 KKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGM 442
Query: 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDK 489
DPFYFFMNPSP YEVTFLNKLP ELTC +GK+SH+VANYIQR++A++LSYECTSFTR+DK
Sbjct: 443 DPFYFFMNPSPVYEVTFLNKLPKELTCGSGKTSHEVANYIQRVVASTLSYECTSFTRRDK 502
Query: 490 YRALAGNDGTVVEKPAKLAANKIMGC 515
YRALAGNDGTVVEK K ANK+MGC
Sbjct: 503 YRALAGNDGTVVEKTNK--ANKVMGC 526
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449459508|ref|XP_004147488.1| PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like [Cucumis sativus] gi|449515732|ref|XP_004164902.1| PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/503 (80%), Positives = 450/503 (89%), Gaps = 7/503 (1%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
FPTID+C+SIGREK TVVAD+DGTLL GRSSFPYFAL+AFE GGVLRLL LLL SP+AG
Sbjct: 15 TFPTIDRCSSIGREKHTVVADMDGTLLCGRSSFPYFALIAFEAGGVLRLLFLLLASPIAG 74
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
FLYY++SESAGIRVLIF+TFAGMKV IESVARAVLPKFY+ DLH ETWRVFSSCG+RCV
Sbjct: 75 FLYYFISESAGIRVLIFSTFAGMKVSDIESVARAVLPKFYAHDLHVETWRVFSSCGKRCV 134
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPRIMVE FLKDFLGADMVIGTEI R+TG ++SPG++VGKNKA A+ ++
Sbjct: 135 LTANPRIMVEPFLKDFLGADMVIGTEIHTIGQRATGLIQSPGIIVGKNKAKAVQQI---- 190
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
PDIG+GDR TD F+ LCKE Y+VP +V PV+ DKLPKPIVFHDGRLV KPTPFM
Sbjct: 191 -TQPDIGIGDRLTDYPFMKLCKEGYVVPAKHEVKPVTVDKLPKPIVFHDGRLVVKPTPFM 249
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGV 313
A L ILWIPVGF+LACLR+AAG+LLPMP+VYYAFWALGVRV I+GTPPPPA+KS+GQTGV
Sbjct: 250 AFLLILWIPVGFILACLRIAAGSLLPMPIVYYAFWALGVRVEIRGTPPPPAKKSTGQTGV 309
Query: 314 LFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLL 373
LFICSHRTLLDPIFLSTALGRPIPAVTYS+SRLSE+ISPIKTVRL+RDRA DA+MI+ LL
Sbjct: 310 LFICSHRTLLDPIFLSTALGRPIPAVTYSISRLSEIISPIKTVRLSRDRAADAAMIKNLL 369
Query: 374 EKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433
++GDL ICPEGTTCREPFLLRFSALFAELTDE+VPVAMSNRMSMFHGTTARGWKGMDPFY
Sbjct: 370 QEGDLAICPEGTTCREPFLLRFSALFAELTDEIVPVAMSNRMSMFHGTTARGWKGMDPFY 429
Query: 434 FFMNPSPAYEVTFLNKLPYELTCSAG-KSSHDVANYIQRLIATSLSYECTSFTRKDKYRA 492
FFMNPSP YEVTFLNKLPYELTC G KSSH+VANYIQR+IA +LSY+CT+FTRKDKYRA
Sbjct: 430 FFMNPSPVYEVTFLNKLPYELTCGGGEKSSHEVANYIQRMIAATLSYKCTNFTRKDKYRA 489
Query: 493 LAGNDGTVVEKPAKLAANKIMGC 515
LAGNDG V EK +K+ + KIMGC
Sbjct: 490 LAGNDGIVPEK-SKVQSTKIMGC 511
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552790|ref|XP_002517438.1| ER glycerol-phosphate acyltransferase [Ricinus communis] gi|223543449|gb|EEF44980.1| ER glycerol-phosphate acyltransferase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/513 (78%), Positives = 457/513 (89%), Gaps = 3/513 (0%)
Query: 1 MAKPEELDYGDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVL 60
MA P+E Y +FP I+KC S+GR+ DTVV D+DGTLL GRS FPYFALVA+E G+L
Sbjct: 1 MANPKE-TYAPFSSFPNIEKCTSVGRQNDTVVTDMDGTLLCGRSPFPYFALVAYEASGIL 59
Query: 61 RLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPE 120
RLL LLL SP+AG L Y++SESAGIRVL+FATFAGM+V IESVARAVLPKFYS DLHPE
Sbjct: 60 RLLFLLLGSPIAGILRYFISESAGIRVLVFATFAGMRVSDIESVARAVLPKFYSSDLHPE 119
Query: 121 TWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGK 180
TWRVFSSCG++CV+T NPRIMVEAFLK+F+GADMVIGTEI V+KGR+TGF++SPGVLVG+
Sbjct: 120 TWRVFSSCGKKCVITENPRIMVEAFLKEFVGADMVIGTEIVVHKGRATGFIRSPGVLVGQ 179
Query: 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVF 240
NKA AL KM D +P+IG+GDR+TD F+ LCKESY+VP N +V+PV KLPKPIVF
Sbjct: 180 NKADAL-KMAFYDAPVPNIGIGDRRTDRPFMKLCKESYIVPSNSQVEPVGPKKLPKPIVF 238
Query: 241 HDGRLVQKPTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTP 300
HDGRLVQKPT +AL T+LWIPVGF+LACLR+AAGALLPMPLVYYA WALGVR++IKGTP
Sbjct: 239 HDGRLVQKPTHLIALATLLWIPVGFILACLRLAAGALLPMPLVYYALWALGVRIHIKGTP 298
Query: 301 PPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTR 360
PPPA+KS+GQ GVLF+CSHRTLLDP+FLS ALGRPIPAVTYSLSRLSE ISPIKTVRLTR
Sbjct: 299 PPPAKKSTGQAGVLFVCSHRTLLDPVFLSIALGRPIPAVTYSLSRLSEFISPIKTVRLTR 358
Query: 361 DRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHG 420
DR TDA+MI++LL++GDLVICPEGTTCREPFLLRFSALFAELTDE+VPVAM+N+M+MFHG
Sbjct: 359 DRVTDANMIKELLQEGDLVICPEGTTCREPFLLRFSALFAELTDELVPVAMANKMTMFHG 418
Query: 421 TTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYE 480
TTARGWKGMDPFYF MNPSPAYEVTFLNKLPY LTC AGKSSH VANYIQR IA +LSY+
Sbjct: 419 TTARGWKGMDPFYFLMNPSPAYEVTFLNKLPYNLTCGAGKSSHSVANYIQRTIAATLSYQ 478
Query: 481 CTSFTRKDKYRALAGNDGTVVEKPAKLAANKIM 513
CTSFTRKDKYRALAGNDGTVVE+P K A +++M
Sbjct: 479 CTSFTRKDKYRALAGNDGTVVEEP-KQARDEVM 510
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357439161|ref|XP_003589857.1| ER glycerol-phosphate acyltransferase [Medicago truncatula] gi|355478905|gb|AES60108.1| ER glycerol-phosphate acyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/506 (78%), Positives = 447/506 (88%), Gaps = 6/506 (1%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPL 71
S FPT++KC SIGREK TVVAD+DGTLL GRSSFPYFAL+AFEVGGVLRLL+ LL SP+
Sbjct: 3 SSTFPTVNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALIAFEVGGVLRLLIYLLASPI 62
Query: 72 AGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
A LYY++SESAGI+VL+FA+ AGMK+ SIESVARAVLPKFYS DLHPETWRVFSSCG+R
Sbjct: 63 AAILYYFISESAGIQVLVFASMAGMKLSSIESVARAVLPKFYSSDLHPETWRVFSSCGKR 122
Query: 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191
CVLTANPRIMVE FLK+FLGADMV+GTEI YKGR+TG + PG+LVG KA L K G
Sbjct: 123 CVLTANPRIMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGDKKAQVLKKTFG 182
Query: 192 DDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTP 251
D E PDIGLGDR TD+ F+ LCKE Y+VP PKV V+ DKLPKPI+FHDGRLVQKPTP
Sbjct: 183 D--EKPDIGLGDRVTDAPFMALCKEGYIVPAKPKVTTVTSDKLPKPIIFHDGRLVQKPTP 240
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQ--KSSG 309
MALL ILWIP+GF LACLR+AAG+LLPM VY AF ALGVRV +KGTPPPP + K++
Sbjct: 241 LMALLIILWIPIGFPLACLRIAAGSLLPMKFVYCAFKALGVRVIVKGTPPPPVETSKTNH 300
Query: 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMI 369
Q+GVLFICSHRTLLDPIFLSTALGR IPAVTYS+SRLSE+ISPIKTVRL+RDRATDA+MI
Sbjct: 301 QSGVLFICSHRTLLDPIFLSTALGRAIPAVTYSVSRLSEIISPIKTVRLSRDRATDAAMI 360
Query: 370 EKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGM 429
+KLL++GDL ICPEGTTCREPFLLRFSALFAELTDE+VPVAM NRMSMFHGTTARGWKGM
Sbjct: 361 KKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGM 420
Query: 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDK 489
DPFYFFMNPSP YEVTFLNKLP ELTC +GK+SH+VANYIQR++A++LSYECTSFTR+DK
Sbjct: 421 DPFYFFMNPSPVYEVTFLNKLPKELTCGSGKTSHEVANYIQRVVASTLSYECTSFTRRDK 480
Query: 490 YRALAGNDGTVVEKPAKLAANKIMGC 515
YRALAGNDGTVVEK K ANK+MGC
Sbjct: 481 YRALAGNDGTVVEKTNK--ANKVMGC 504
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356577516|ref|XP_003556870.1| PREDICTED: glycerol-3-phosphate acyltransferase 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/510 (78%), Positives = 444/510 (87%), Gaps = 10/510 (1%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
FPT++KC SIGREK TVVAD+DGTLL GRSSFPYFALVAFE GG+LRLL +L SP+A
Sbjct: 5 TFPTVNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALVAFEAGGILRLLFYVLASPIAA 64
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
LYY++SESAGI+VLIFA+ AGMKV SIESVARAVLPKFY+GD+HPE+WRVFSSCG+RCV
Sbjct: 65 LLYYFISESAGIQVLIFASMAGMKVSSIESVARAVLPKFYAGDVHPESWRVFSSCGKRCV 124
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPR+MVE FLK+FLGADMV+GTEI YKGR+TG + PG+LVGK KA AL K G
Sbjct: 125 LTANPRVMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGKKKADALKKAFG-- 182
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
EE PDIGLGDR+TD+ F+ LCKE Y+VPP P+V VS DKLPKPI+FHDGRLVQKPTP +
Sbjct: 183 EEKPDIGLGDRQTDAPFMALCKEGYIVPPKPEVKSVSTDKLPKPIIFHDGRLVQKPTPLI 242
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSG---- 309
ALLTILW+P+ F LACLRMAAG+LLPM LVYYAFWALGVRV IKG PPP KS+
Sbjct: 243 ALLTILWMPIAFPLACLRMAAGSLLPMHLVYYAFWALGVRVIIKGNPPPKVTKSNPNPNP 302
Query: 310 ----QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATD 365
+GVLFICSHRTLLDPIFLS ALGRPIPAVTYS+SRLSE+ISPIKTVRL RDRA D
Sbjct: 303 NNNNDSGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEIISPIKTVRLNRDRAID 362
Query: 366 ASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARG 425
A+MI+KLL++GDL ICPEGTTCREPFLLRFSALFAELTDE+VPVAM NRMSMFHGTTARG
Sbjct: 363 AAMIKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 422
Query: 426 WKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFT 485
WKGMDPFYFFMNPSPAYEVTFLNKLP ELTC AGKSSHDVANYIQR+IA +LSYECT FT
Sbjct: 423 WKGMDPFYFFMNPSPAYEVTFLNKLPKELTCGAGKSSHDVANYIQRVIAATLSYECTGFT 482
Query: 486 RKDKYRALAGNDGTVVEKPAKLAANKIMGC 515
RKDKYRALAGNDG VVEK L ANK+MGC
Sbjct: 483 RKDKYRALAGNDGVVVEKGHILKANKVMGC 512
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533281|ref|XP_003535194.1| PREDICTED: glycerol-3-phosphate acyltransferase 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/507 (78%), Positives = 444/507 (87%), Gaps = 7/507 (1%)
Query: 14 NFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAG 73
FPT++KC SIGRE+ TVVAD+DGTLL GRSSFPYFALVAFE GGVLRLL +L SP+A
Sbjct: 5 TFPTVNKCTSIGREQHTVVADMDGTLLIGRSSFPYFALVAFEAGGVLRLLFYVLASPIAA 64
Query: 74 FLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCV 133
LYY++SESAGI+VLIFA+ AG+KV SIESVARAVLPKFY+GD+HPE+WRVFSSCG+RCV
Sbjct: 65 LLYYFISESAGIQVLIFASMAGIKVSSIESVARAVLPKFYAGDVHPESWRVFSSCGKRCV 124
Query: 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193
LTANPR+MVE FLK+FLGADMV+GTEI YKGR+TG V PG+LVGK KA AL K G
Sbjct: 125 LTANPRVMVEPFLKEFLGADMVLGTEIASYKGRATGLVCKPGILVGKKKANALKKAFG-- 182
Query: 194 EEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFM 253
EE PDIGLGDR+TD+ F+ LCKE Y+VPP +V VS DKLPKPI+FHDGRLVQKPTP +
Sbjct: 183 EEKPDIGLGDRQTDAPFMALCKEGYIVPPKLEVKSVSTDKLPKPIIFHDGRLVQKPTPLI 242
Query: 254 ALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQ--- 310
ALLTILWIP+ F LACLR+AAG+LLPM +VYYAFWALGV V IKGTPPP KS+
Sbjct: 243 ALLTILWIPIAFPLACLRIAAGSLLPMHMVYYAFWALGVHVIIKGTPPPKVTKSNPNPNN 302
Query: 311 --TGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASM 368
+GVLFICSHRTLLDPIFLS ALGRPIPAVTYS+SRLSE+ISPIKTVRL+RDRATDA+M
Sbjct: 303 NNSGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEIISPIKTVRLSRDRATDAAM 362
Query: 369 IEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKG 428
I+KLL++GDL ICPEGTTCREPFLLRFSALFAELTDE+VPVAM NRMSMFHGTTARGWKG
Sbjct: 363 IKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG 422
Query: 429 MDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKD 488
MDPFYFFMNPSP YEVTFLNKLP ELTC+ GKSSHDVANYIQR+IA +LSYECT FTRKD
Sbjct: 423 MDPFYFFMNPSPTYEVTFLNKLPKELTCAIGKSSHDVANYIQRVIAATLSYECTGFTRKD 482
Query: 489 KYRALAGNDGTVVEKPAKLAANKIMGC 515
KYRALAGNDG VVEK L ANK+MGC
Sbjct: 483 KYRALAGNDGVVVEKGHVLKANKVMGC 509
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | ||||||
| TAIR|locus:2042947 | 501 | GPAT6 "GLYCEROL-3-PHOSPHATE sn | 0.949 | 0.976 | 0.536 | 1.2e-143 | |
| TAIR|locus:2126101 | 500 | GPAT8 "GLYCEROL-3-PHOSPHATE sn | 0.937 | 0.966 | 0.538 | 4.7e-135 | |
| TAIR|locus:2025381 | 503 | GPAT4 "GLYCEROL-3-PHOSPHATE sn | 0.937 | 0.960 | 0.531 | 3e-133 | |
| TAIR|locus:2080687 | 502 | GPAT5 "GLYCEROL-3-PHOSPHATE sn | 0.908 | 0.932 | 0.536 | 2.5e-129 | |
| TAIR|locus:2152825 | 500 | GPAT7 "GLYCEROL-3-PHOSPHATE sn | 0.900 | 0.928 | 0.522 | 1.9e-124 | |
| TAIR|locus:2009225 | 585 | GPAT1 "GLYCEROL-3-PHOSPHATE sn | 0.904 | 0.796 | 0.441 | 7.2e-107 | |
| TAIR|locus:2204818 | 530 | GPAT2 "GLYCEROL-3-PHOSPHATE sn | 0.904 | 0.879 | 0.400 | 1.7e-89 | |
| TAIR|locus:2141410 | 520 | GPAT3 "GLYCEROL-3-PHOSPHATE sn | 0.899 | 0.890 | 0.398 | 3e-85 | |
| ZFIN|ZDB-GENE-030131-3375 | 423 | aup1 "ancient ubiquitous prote | 0.444 | 0.541 | 0.280 | 0.00037 |
| TAIR|locus:2042947 GPAT6 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
Identities = 265/494 (53%), Positives = 352/494 (71%)
Query: 15 FPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXXXXX 74
F I KC R TV AD+DGTLL RS+FPY+ LVA E G +
Sbjct: 10 FEQISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYL 69
Query: 75 XYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVL 134
Y +SE+ I V +F TFAG+K+ +E V R+VLP+FY+ D+ P+TWR+F++ G+R ++
Sbjct: 70 TYLTISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYII 129
Query: 135 TANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGD- 192
TA+PRIMVE F+K FLG D V+GTE+ V K GR+TGF + PG+LVG+ K +++ G
Sbjct: 130 TASPRIMVEPFVKTFLGVDKVLGTELEVSKSGRATGFTRKPGILVGQYKRDVVLREFGGL 189
Query: 193 DEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKPTPF 252
++PD+GLGD KTD F+++CKE YMVP K +P+ ++KL PI+FH+GRLVQ+PTP
Sbjct: 190 ASDLPDLGLGDSKTDHDFMSICKEGYMVP-RTKCEPLPRNKLLSPIIFHEGRLVQRPTPL 248
Query: 253 MALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTG 312
+ALLT LW+PVGF+L+ +R+ LP + Y + G+++ + G PPPP + GQ G
Sbjct: 249 VALLTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKP--GQPG 306
Query: 313 VLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKL 372
L +C+HRT+LDP+ + ALGR I VTYS+S+ SELISPIK V LTR R DA+ I++L
Sbjct: 307 HLLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRL 366
Query: 373 LEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432
LE+GDLVICPEGTTCREPFLLRFSALFAELTD +VPVA++ + SMF+GTT RG+K +DP+
Sbjct: 367 LEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPY 426
Query: 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRA 492
+ FMNP P YE+TFL ++P ELTC GKS +VANYIQR++ +L +ECT+FTRKDKY
Sbjct: 427 FAFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYAM 486
Query: 493 LAGNDGTVVEKPAK 506
LAG DG V K K
Sbjct: 487 LAGTDGRVPVKKEK 500
|
|
| TAIR|locus:2126101 GPAT8 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 265/492 (53%), Positives = 343/492 (69%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXX 71
S NFP I +C G E D++ AD+DGTLL RSSFPYF LVA E G +
Sbjct: 7 SQNFPPITECRD-G-EYDSIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPF 64
Query: 72 XXXXYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
Y +VSES GI++LIF +FAG+K+ IE V+RAVLP+FY+ D+ +++ VF C R+
Sbjct: 65 VIISYLFVSESLGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRK 124
Query: 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVYK--GRSTGFVKSPGVLVGKNKAGALMKM 189
V+TANP +MVEAF+KD+LG D V+GTEI V R+TGFVK PGVLVG K A++K
Sbjct: 125 VVVTANPIVMVEAFVKDYLGGDKVLGTEIEVNPKTNRATGFVKKPGVLVGDLKRLAILKE 184
Query: 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQKP 249
G+ E PD+GLGDR +D F++LCK+ YMV + +++L IVFHDGRL Q+P
Sbjct: 185 FGN--ESPDLGLGDRTSDHDFMSLCKKGYMVHATKSATTIPKERLKNRIVFHDGRLAQRP 242
Query: 250 TPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSG 309
TP A++T LW+P GF+L+ +R+ LP V Y + LG+ + I+G PPP S G
Sbjct: 243 TPLNAIITYLWLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPP--SPG 300
Query: 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMI 369
G L++ +HRT LDPI ++ ALGR I VTYS+SRLS ++SPI V LTRDRATDA+ +
Sbjct: 301 TLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANM 360
Query: 370 EKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGM 429
KLLEKGDLVICPEGTTCRE +LLRFSALFAEL+D +VPVAM+ + MF+GTT RG K
Sbjct: 361 RKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFW 420
Query: 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAG-KSSHDVANYIQRLIATSLSYECTSFTRKD 488
DP++FFMNP P+YE TFL++LP E+T + G K+ +VANY+Q++I L +ECT TRKD
Sbjct: 421 DPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKD 480
Query: 489 KYRALAGNDGTV 500
KY L GNDG V
Sbjct: 481 KYLLLGGNDGKV 492
|
|
| TAIR|locus:2025381 GPAT4 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
Identities = 262/493 (53%), Positives = 340/493 (68%)
Query: 12 SFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXX 71
S +FP I +C S RE D++ AD+DGTLL RSSFPYF LVA E G +
Sbjct: 7 SRSFPPISECKS--REYDSIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPI 64
Query: 72 XXXXYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRR 131
Y +VSES GI++LIF +FAG+K+ +IE V+RAVL +FY+ D+ +++ VF C +R
Sbjct: 65 VIIAYLFVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKR 124
Query: 132 -CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKG--RSTGFVKSPGVLVGKNKAGALMK 188
V+TANP +MVE F+KD+LG D V+GTEI V ++TGFVK PGVLVG K A++K
Sbjct: 125 KVVVTANPIVMVEPFVKDYLGGDKVLGTEIEVNPKTMKATGFVKKPGVLVGDLKRLAILK 184
Query: 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQK 248
GDD PD+GLGDR +D F+++CKE YMV V + L I+FHDGRLVQ+
Sbjct: 185 EFGDDS--PDLGLGDRTSDHDFMSICKEGYMVHETKSATTVPIESLKNRIIFHDGRLVQR 242
Query: 249 PTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSS 308
PTP AL+ LW+P GF+L+ R+ LP V Y + LG+ + I+G PPP S
Sbjct: 243 PTPLNALIIYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPP--SP 300
Query: 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASM 368
G+ G L++ +HRT LDPI ++ ALGR I VTYS+SRLS ++SPI V LTRDR DA+
Sbjct: 301 GKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAAR 360
Query: 369 IEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKG 428
+ +LLEKGDLVICPEGTTCREP+LLRFSALFAEL+D +VPVAM+ + MF+GTT RG K
Sbjct: 361 MRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKF 420
Query: 429 MDPFYFFMNPSPAYEVTFLNKLPYELTCSAG-KSSHDVANYIQRLIATSLSYECTSFTRK 487
DP++FFMNP P+YE TFL++LP E+T + G K+ +VANY+Q++I L +ECT TRK
Sbjct: 421 WDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRK 480
Query: 488 DKYRALAGNDGTV 500
DKY L GNDG V
Sbjct: 481 DKYLLLGGNDGKV 493
|
|
| TAIR|locus:2080687 GPAT5 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 259/483 (53%), Positives = 331/483 (68%)
Query: 25 GREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXXXXXXYYYVSESAG 84
G +VV++ +GT+L+ SF YF LVAFE G+ + ++A
Sbjct: 7 GTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAA 66
Query: 85 IRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEA 144
+++ IF G++ P IESVARAVLPKFY D+ +TWRVFSSC +R V+T PR+MVE
Sbjct: 67 LKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVER 126
Query: 145 FLKDFLGADMVIGTEICVYK-GRSTGFVKSPGV-LVGKNKAGALMKMLGDDEEMPDIGLG 202
F K+ L AD VIGTE+ V + G TG ++ V N+ L +G P +GLG
Sbjct: 127 FAKEHLRADEVIGTELIVNRFGFVTGLIRETDVDQSALNRVANLF--VG---RRPQLGLG 181
Query: 203 DRK-TDSL-FLNLCKESYMVP-PNPKVDPVSQDKL-PKPIVFHDGRLVQKPTPFMALLTI 258
T S FL+LC+E P P Q +L P P++FHDGRLV++PTP AL+ +
Sbjct: 182 KPALTASTNFLSLCEEHIHAPIPENYNHGDQQLQLRPLPVIFHDGRLVKRPTPATALIIL 241
Query: 259 LWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPP-PPAQKSSGQTGVLFIC 317
LWIP G +LA +R+ GA+LP+ Y G + +KG PP PPA +G++GVLF+C
Sbjct: 242 LWIPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPA---AGKSGVLFVC 298
Query: 318 SHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGD 377
+HRTL+DP+ LS LGR IPAVTYS+SRLSE++SPI TVRLTR R DA+ I++ L KGD
Sbjct: 299 THRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGD 358
Query: 378 LVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMN 437
LV+CPEGTTCREPFLLRFSALFAELTD +VPVAM+ R+ FH TTARGWKG+DP +FFMN
Sbjct: 359 LVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMN 418
Query: 438 PSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGND 497
P P YE+TFLN+LP E TCS+GKS HDVANY+QR++A +L +ECT+FTRKDKYR LAGND
Sbjct: 419 PRPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGND 478
Query: 498 GTV 500
GTV
Sbjct: 479 GTV 481
|
|
| TAIR|locus:2152825 GPAT7 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 249/477 (52%), Positives = 320/477 (67%)
Query: 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXXXXXXYYYVSESAGIRVLI 89
+VV++++GTLL+ F YF LVAFE G+ + ++++I
Sbjct: 10 SVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLMI 69
Query: 90 FATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDF 149
F AG+ IESVARAVLPKF+ D+ + WR F SC +R V+T PR+MVE F KD
Sbjct: 70 FVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKDH 129
Query: 150 LGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRK-TD 207
L AD VIGTEI V + G +TG ++ V ++ ++ + D P +GLG +D
Sbjct: 130 LSADEVIGTEIVVNRFGYATGLIQETNV--DQSVFNSVANLFVD--RRPQLGLGRHIISD 185
Query: 208 S-LFLNLCKESYMVPPNPKVDPVSQDKL---PKPIVFHDGRLVQKPTPFMALLTILWIPV 263
S FL+LC+E P + +Q +L P P++FHDGRLV+ PTP AL+ +LWIP
Sbjct: 186 SPTFLSLCEEQVHAPVPSNYNGHNQ-RLHVQPLPVIFHDGRLVKLPTPATALIILLWIPF 244
Query: 264 GFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLL 323
G +LA +R+ G LLP+ + Y R +KG PP AQ ++G GVLF+C+HRTL+
Sbjct: 245 GIILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPP--AQATTGNPGVLFVCTHRTLM 302
Query: 324 DPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPE 383
DP+ LS LGR IPAVTYS+SRLSE++SPI T RLTR R DA MI+K L GDLV+ PE
Sbjct: 303 DPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPE 362
Query: 384 GTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYE 443
GTTCREPFLLRFSALFAELTD +VPVAM+ R+ FH TTARGWKG+DP +FFMNP P YE
Sbjct: 363 GTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYE 422
Query: 444 VTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTV 500
VTFLN+L E TCS+GKS +DVANY+QR++A +L +ECT+FTRKDKYR LAGNDGTV
Sbjct: 423 VTFLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 479
|
|
| TAIR|locus:2009225 GPAT1 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 216/489 (44%), Positives = 313/489 (64%)
Query: 28 KDTVVADVDGTLLRGRSS------FPYFALVAFEVGGVXXXXXXXXXXXXXXXXYYYVSE 81
+DT D+DG LLR SS FPYF LVAFE G + + + +
Sbjct: 103 RDTFFCDIDGVLLRQHSSKHFHTFFPYFMLVAFEGGSIIRAILLLLSCSFL----WTLQQ 158
Query: 82 SAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRI 140
+RVL F TF+G++V +++V+R+VLPKF+ +L+ + + +++ + V T+ P++
Sbjct: 159 ETKLRVLSFITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKVVFTSLPQV 218
Query: 141 MVEAFLKDFLGADMVIGTEICVYK--GRS--TGFVKSPGVLVGKNKAGALMKMLGDDEEM 196
+VE FL++ L AD VIGT++ K GR TG G ++ K+K+ D ++
Sbjct: 219 LVERFLREHLNADDVIGTKLQEIKVMGRKFYTGLASGSGFVL-KHKSAE--DYFFDSKKK 275
Query: 197 PDIGLGDRKT--DSLFLNLCKESYMVPPNP---KVDPVSQDKLPKPIVFHDGRLVQKPTP 251
P +G+G + D +F+++CKE+Y K + + +++ PKP++FHDGRL PTP
Sbjct: 276 PALGIGSSSSPQDHIFISICKEAYFWNEEESMSKNNALPRERYPKPLIFHDGRLAFLPTP 335
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQT 311
L +W+P+GFLLA R++ G LP + + GVR+ K + G +
Sbjct: 336 LATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGRPEKGNS 395
Query: 312 GVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEK 371
GVL++C+HRTLLDP+FL+T+LG+P+ AVTYSLS+ SE I+P+KTV L RDR D +++
Sbjct: 396 GVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQR 455
Query: 372 LLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431
LL KGDLV+CPEGTTCREP+LLRFS LFAELT+++VPVA+ R+SMF+GTTA G K +DP
Sbjct: 456 LLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKCLDP 515
Query: 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491
+F MNP P Y + L KLP E+TC+ GKSS +VAN+IQ +A L +ECT+ TR+DKY
Sbjct: 516 IFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLTRRDKYL 575
Query: 492 ALAGNDGTV 500
LAGN+G V
Sbjct: 576 VLAGNEGIV 584
|
|
| TAIR|locus:2204818 GPAT2 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 195/487 (40%), Positives = 287/487 (58%)
Query: 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXXXXXXYYYVSESAGIRVLI 89
T++ +V+G LL+ S FPYF +VAFE GGV Y + G++ ++
Sbjct: 52 TLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLLVLYPFISLMSYEM----GLKTMV 107
Query: 90 FATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDF 149
+F G+K S V ++VLPK++ D+ E ++V G+R ++ P++M++ FL+D+
Sbjct: 108 MLSFFGVKKESFR-VGKSVLPKYFLEDVGLEMFQVLKRGGKRVAVSDLPQVMIDVFLRDY 166
Query: 150 LGADMVIGTEICVYKGRSTGFVKSPGVL-VGKNKAGALMKMLGDDEEMPDI-GLGDRKTD 207
L ++V+G ++ + G G V+ L + +K + LG + I
Sbjct: 167 LEIEVVVGRDMKMVGGYYLGIVEDKKNLEIAFDKV-VQEERLGSGRRLIGITSFNSPSHR 225
Query: 208 SLFLNLCKESYMVPPNPKVD--PVSQDKLPKPIVFHDGRLVQKPTPFMALLTILWIPVGF 265
SLF C+E Y V + K + QD+ PKP++FHDGRL KPTP L+ +W P
Sbjct: 226 SLFSQFCQEIYFVRNSDKKSWQTLPQDQYPKPLIFHDGRLAVKPTPLNTLVLFMWAPFAA 285
Query: 266 LLACLRMAAGALLPMPLV--YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLL 323
+LA R+ G LP L + AF G+ + + + + G LF+C+HRTLL
Sbjct: 286 VLAAARLVFGLNLPYSLANPFLAF--SGIHLTLTVNNHNDLISADRKRGCLFVCNHRTLL 343
Query: 324 DPIFLSTALGRP-IPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICP 382
DP+++S AL + + AVTYSLSRLSEL++PIKTVRLTRDR D +EKLL +GDLV+CP
Sbjct: 344 DPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCP 403
Query: 383 EGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAY 442
EGTTCREP+LLRFS LF+E+ D +VPVA+ + ++ F+GTTA G K DP +F +NP P+Y
Sbjct: 404 EGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFPSY 463
Query: 443 EVTFLNKLP--YELTCSA----GKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGN 496
V L+ + TC GK + +VAN++Q I +L +ECT+ TR+DKY LAGN
Sbjct: 464 TVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQHEIGNALGFECTNLTRRDKYLILAGN 523
Query: 497 DGTVVEK 503
+G V +K
Sbjct: 524 NGVVKKK 530
|
|
| TAIR|locus:2141410 GPAT3 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 195/489 (39%), Positives = 282/489 (57%)
Query: 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVXXXXXXXXXXXXXXXXYYYVSESAGIRV 87
+ T++ +V+G LL+ S FPYF LVAFE GGV +S G++V
Sbjct: 44 RHTLIFNVEGALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLISL----MSHEMGVKV 99
Query: 88 LIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTAN-PRIMVEAFL 146
++ +F G+K + RAVLPK++ D+ E + V G++ ++ + P++M+E FL
Sbjct: 100 MVMVSFFGIKKEGFRA-GRAVLPKYFLEDVGLEMFEVLKRGGKKIGVSDDLPQVMIEGFL 158
Query: 147 KDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD---IGLGD 203
+D+L D+V+G E+ V G G ++ K K + L E + IG+
Sbjct: 159 RDYLEIDVVVGREMKVVGGYYLGIMED------KTKHDLVFDELVRKERLNTGRVIGITS 212
Query: 204 RKTDS---LFLNLCKESYMVPPNPKVD--PVSQDKLPKPIVFHDGRLVQKPTPFMALLTI 258
T LF C+E Y V + K + + + PKP++FHDGRL KPT L+
Sbjct: 213 FNTSLHRYLFSQFCQEIYFVKKSDKRSWQTLPRSQYPKPLIFHDGRLAIKPTLMNTLVLF 272
Query: 259 LWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGT-PPPPAQKSSGQTGVLFIC 317
+W P A R+ +P L G R+ + QK S + G LF+C
Sbjct: 273 MWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVC 332
Query: 318 SHRTLLDPIFLSTALGRP-IPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKG 376
+HRTLLDP++++ AL + I VTYSLSR+SE+++PIKTVRLTRDR +D +EKLL +G
Sbjct: 333 NHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEG 392
Query: 377 DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFM 436
DLV+CPEGTTCREP+LLRFS LF E++D +VPVA++ ++ F+GTTA G K +DP +F +
Sbjct: 393 DLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLL 452
Query: 437 NPSPAYEVTFLNKLPYELTCSA--GKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALA 494
+P P Y + FL+ + TC GK +VAN +Q I +L +ECTS TRKDKY LA
Sbjct: 453 DPYPTYTIQFLDPVS-GATCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILA 511
Query: 495 GNDGTVVEK 503
GN+G VV+K
Sbjct: 512 GNNG-VVKK 519
|
|
| ZFIN|ZDB-GENE-030131-3375 aup1 "ancient ubiquitous protein 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 71/253 (28%), Positives = 106/253 (41%)
Query: 252 FMALLTILWIPVGFLLACLRMAAGA---LLPMPLVYYAFWALGVRVYIKGTPPPPAQKSS 308
F+ LL +L+ PVGF L LR+ G L+ L VR+ Q S
Sbjct: 20 FILLLLLLYAPVGFCLMLLRIFIGVHVFLVSCALPDSIVRRFIVRIMCSVLGLHVQQNSP 79
Query: 309 ---GQTGVLFICSHRTLLDP--IFLSTALGRPI---PAVTYSLSR-LSELISPIKT-VRL 358
+T L++C+H T D I L T+ P+ P +R EL + + L
Sbjct: 80 RLRDKTTRLYVCNHVTHFDHNIINLLTSCNTPLLEGPVGFLCWARGFMELGQGVGSRTEL 139
Query: 359 TRDRATDASMIEKLLEKGDLVICPE-GTTCREPFLLRFSALFAELTDEVVPVAMS-NRMS 416
T S + L L++ PE TT LL+FS+ ++D + PVA+ R
Sbjct: 140 TETLHRYCSSPDTL----PLLLFPEEDTTNGRTGLLKFSSWPFSVSDSIQPVALLVKRPF 195
Query: 417 MFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATS 476
+ T W + FF+ P Y V +L L E G++ + A+ +Q L+AT
Sbjct: 196 IAVSTPESSWLTELLWTFFV-PFTVYHVRWLPPLSKE----DGETHQEFASKVQGLLATE 250
Query: 477 LSYECTSFTRKDK 489
L T T+ DK
Sbjct: 251 LGVISTQITKADK 263
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 515 499 0.00084 119 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 615 (65 KB)
Total size of DFA: 278 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.42u 0.11s 42.53t Elapsed: 00:00:02
Total cpu time: 42.42u 0.11s 42.53t Elapsed: 00:00:02
Start: Mon May 20 23:44:55 2013 End: Mon May 20 23:44:57 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O80437 | GPAT6_ARATH | 2, ., 3, ., 1, ., 1, 5 | 0.5414 | 0.9514 | 0.9780 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 515 | |||
| PLN02177 | 497 | PLN02177, PLN02177, glycerol-3-phosphate acyltrans | 0.0 | |
| PLN02499 | 498 | PLN02499, PLN02499, glycerol-3-phosphate acyltrans | 0.0 | |
| PLN02588 | 525 | PLN02588, PLN02588, glycerol-3-phosphate acyltrans | 1e-124 | |
| cd06551 | 187 | cd06551, LPLAT, Lysophospholipid acyltransferases | 6e-24 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-13 | |
| cd07989 | 184 | cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr | 4e-13 | |
| smart00563 | 118 | smart00563, PlsC, Phosphate acyltransferases | 3e-12 | |
| pfam01553 | 131 | pfam01553, Acyltransferase, Acyltransferase | 3e-10 | |
| TIGR01490 | 202 | TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfami | 1e-09 | |
| COG0204 | 255 | COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl | 5e-08 | |
| cd07991 | 211 | cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt | 7e-08 | |
| TIGR01488 | 177 | TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf | 0.004 |
| >gnl|CDD|215118 PLN02177, PLN02177, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 651 bits (1680), Expect = 0.0
Identities = 295/498 (59%), Positives = 379/498 (76%), Gaps = 6/498 (1%)
Query: 10 GDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLS 69
G S F I KC+S GR TV AD+DGTLL RS+FPY+ LVA E G +LR L+LLL
Sbjct: 4 GASRRFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSV 63
Query: 70 PLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG 129
P F Y ++SES I+ +F FAG+K+ IE V+R+VLPKFY+ D+HPETWRVF+S G
Sbjct: 64 PFVYFTYLFISESLAIKTFVFIAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFG 123
Query: 130 RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMK 188
+R ++TA+PRIMVE F+K FLGAD V+GTE+ V K GR+TGF+K PGVLVG +K A++K
Sbjct: 124 KRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK 183
Query: 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLVQK 248
GD +PD+GLGDR+TD F+++CKE YMVP K +P+ ++KL P++FH+GRLVQ+
Sbjct: 184 EFGDA--LPDLGLGDRETDHDFMSICKEGYMVP-RTKCEPLPRNKLLSPVIFHEGRLVQR 240
Query: 249 PTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSS 308
PTP +ALLT LW+P+GF+L+ LR+ LP + Y + LG+R+ +KG PPPP +K
Sbjct: 241 PTPLVALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPKK-- 298
Query: 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASM 368
GQ GVLF+C+HRT+LDP+ + ALGR I VTYS+S+ SELISPIK V L+R+R DA+
Sbjct: 299 GQPGVLFVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALSREREKDAAN 358
Query: 369 IEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKG 428
I++LLE+GDLVICPEGTTCREPFLLRFSALFAELTD +VPVA++ + SMFHGTT RG+K
Sbjct: 359 IKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFHGTTVRGYKL 418
Query: 429 MDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKD 488
+DP++ FMNP P YE+TFLN+LP ELTC GKS +VANYIQR++A +L +ECT+ TRKD
Sbjct: 419 LDPYFVFMNPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTRKD 478
Query: 489 KYRALAGNDGTVVEKPAK 506
KY LAG DG V K K
Sbjct: 479 KYAILAGTDGRVPSKKEK 496
|
Length = 497 |
| >gnl|CDD|178115 PLN02499, PLN02499, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 613 bits (1582), Expect = 0.0
Identities = 269/486 (55%), Positives = 340/486 (69%), Gaps = 9/486 (1%)
Query: 22 ASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSE 81
G +VV++++GTLL+ F YF LVAFE G++R LLL L P+ L
Sbjct: 2 EQSGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMG 61
Query: 82 SAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIM 141
A ++++IF AG+ IESVARAVLPKFY D+ E W+VFSSC +R V+T PR+M
Sbjct: 62 DAALKLMIFVATAGVHESEIESVARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVM 121
Query: 142 VEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIG 200
VE F K+ L AD VIG+E+ V + G +TGF++ G V ++ A + + D+ P +G
Sbjct: 122 VERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVDER--PQLG 177
Query: 201 LGDRKTDSLFLNLCKESYMVP--PNPKVDPVSQDKLPKPIVFHDGRLVQKPTPFMALLTI 258
LG S FL+LCKE P N D Q P P++FHDGRLV++PTP ALL +
Sbjct: 178 LGRISASSSFLSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLIL 237
Query: 259 LWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICS 318
LWIP+G +LA +R+ G +LPM + Y G +V +KG PPPPA S G +GVLF+C+
Sbjct: 238 LWIPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPA--SGGNSGVLFVCT 295
Query: 319 HRTLLDPIFLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDL 378
HRTL+DP+ LST LGR IPAVTYS+SRLSE++SPI TVRLTR R DA I++ L +GDL
Sbjct: 296 HRTLMDPVVLSTVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDL 355
Query: 379 VICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP 438
V+CPEGTTCREPFLLRFSALFAELTD +VPVAM+ R+ FH TTARGWKG+DP +FFMNP
Sbjct: 356 VVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNP 415
Query: 439 SPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDG 498
P YEVTFLN+LP E TCS+GKS HDVANY+QR++A +L +ECT+FTRKDKYR LAGNDG
Sbjct: 416 RPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 475
Query: 499 TVVEKP 504
TV
Sbjct: 476 TVSYLS 481
|
Length = 498 |
| >gnl|CDD|215320 PLN02588, PLN02588, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-124
Identities = 201/508 (39%), Positives = 295/508 (58%), Gaps = 34/508 (6%)
Query: 16 PTIDKCASIGREKD------TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLS 69
KC S G + T++ +V+G LL+ S FPYF +VAFE GGV+R L L +L
Sbjct: 32 QKYQKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLY 91
Query: 70 PLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG 129
P + Y G++ ++ +F G+K S +AVLPK++ D+ E ++V G
Sbjct: 92 PFISLMSY----EMGLKTMVMLSFFGVKKESFR-AGKAVLPKYFLEDVGLEMFQVLKRGG 146
Query: 130 RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189
+R ++ P++M++ FL+D+L ++V+G ++ + G G ++ K K
Sbjct: 147 KRVGVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMED------KKKHELAFDK 200
Query: 190 LGDDEEMPD---IGLGDRKTD---SLFLNLCKESYMVPPNPKVD--PVSQDKLPKPIVFH 241
+ +E + IG+ + SLF C+E Y V + K + +D+ PKP++FH
Sbjct: 201 VVQEERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFH 260
Query: 242 DGRLVQKPTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPP 301
DGRL KPTP L+ +W P LA R+ G LP L G+ + +
Sbjct: 261 DGRLAIKPTPLNTLVLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDL 320
Query: 302 PPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP-IPAVTYSLSRLSELISPIKTVRLTR 360
+ + + G LF+C+HRTLLDP+++S AL + I AVTYSLSRLSEL++PIKTVRLTR
Sbjct: 321 ISSDR---KKGCLFVCNHRTLLDPLYISYALRKKNIKAVTYSLSRLSELLAPIKTVRLTR 377
Query: 361 DRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHG 420
DR D +EKLL +GDLV+CPEGTTCREP+LLRFS LF+E+ D +VPVA+ + ++ F+G
Sbjct: 378 DRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYG 437
Query: 421 TTARGWKGMDPFYFFMNPSPAYEVTFLNKL--PYELTC---SAGKSSHDVANYIQRLIAT 475
TTA G K DP +F +NP P+Y V L+ + TC GK +VAN++Q I
Sbjct: 438 TTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGN 497
Query: 476 SLSYECTSFTRKDKYRALAGNDGTVVEK 503
+L +ECT+ TR+DKY LAGN+G V +K
Sbjct: 498 ALGFECTNLTRRDKYLILAGNNGVVKKK 525
|
Length = 525 |
| >gnl|CDD|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 6e-24
Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 39/201 (19%)
Query: 290 LGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-PIPAVTYSLSRLS- 347
VR+ +KG PPPP G VLF+ +H + D + L L R V +
Sbjct: 10 GFVRLEVKGPPPPP-----GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELL 64
Query: 348 ---ELISPIKTVRLTRDRATDAS-----MIEKLLEKG-DLVICPEGTTCREP-FLLRFSA 397
+ + + RD A+ + L + G + I PEGT R L+F
Sbjct: 65 ERYPFFTRLGAFSVDRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKP 124
Query: 398 LFAELTDE----VVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYE 453
A L ++ +VPVA+ +F + + P PY
Sbjct: 125 GVAHLAEKAGVPIVPVALRYTFELFEQF--------PEIFVRIGPPI----------PYA 166
Query: 454 LTCSAGKSSHDVANYIQRLIA 474
T + + ++AN + RL+
Sbjct: 167 ETALGEELAAELANRLTRLLD 187
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and Tafazzin (the protein product of the Barth syndrome (TAZ) gene). Length = 187 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 2e-13
Identities = 56/224 (25%), Positives = 82/224 (36%), Gaps = 22/224 (9%)
Query: 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGI 85
R K V D+DGTL+ A A VL + A ES +
Sbjct: 3 RMKKLAVFDLDGTLINA-ELIDELARGAGVGEEVLAIT------ERAMRGELDFEESLRL 55
Query: 86 RVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVL-TANPRIMVEA 144
RV A G+ V +E V L G E + G + V+ + +VE
Sbjct: 56 RV---ALLKGLPVEVLEEVREEFLR-LTPGA--EELVAALKAAGAKVVIISGGFTFLVEP 109
Query: 145 FLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD--IGLG 202
+ + LG D V+ E+ + G+ TG V P + G+ KA AL ++ + + + G
Sbjct: 110 -IAERLGIDYVVANELEIDDGKLTGRVVGP-ICDGEGKAKALRELAAELGIPLEETVAYG 167
Query: 203 DRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLV 246
D D L V P PK+ + I D R V
Sbjct: 168 DSANDLPMLEAAGLPIAVNPKPKL----RALADVRIWPIDLRAV 207
|
Length = 212 |
| >gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 4e-13
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 30/197 (15%)
Query: 287 FWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS---- 342
LGVRV ++G P + V+ + +H++ LDP+ L AL RPI V
Sbjct: 5 LRLLGVRVRVEGLENLPPKG-----PVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFK 59
Query: 343 ---LSRLSELISPIKTVRLTRDRATDA-SMIEKLLEKGD-LVICPEGTTCREPFLLRF-- 395
L L L+ I R A +A + L++G+ +VI PEGT R+ LL F
Sbjct: 60 IPFLGWLLRLLGAIPIDRGNGRSAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKS 119
Query: 396 -SALFAELTD-EVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYE 453
+ A+ +VPVA+S W + P V +P E
Sbjct: 120 GAFRLAKEAGVPIVPVAISG-----------TWGSLPKGKKLPRPGRV-TVRIGEPIPPE 167
Query: 454 LTCSAGKSSHDVANYIQ 470
A + ++ ++
Sbjct: 168 GLELAEEDRKELREKVR 184
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184 |
| >gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 3e-12
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 313 VLFICSHRTLLDPIFLSTALGRPIPAVTYSLSR-------LSELISPIKTVRLTRDRATD 365
L + +H++ LDP+ LS L R + V + + L L+ + + + R
Sbjct: 1 ALVVANHQSFLDPLVLSALLPRKLGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRSNGRK 60
Query: 366 ASM-----IEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDE----VVPVAMSN 413
A +E L E L+I PEGT R LL F A L E +VPVA+
Sbjct: 61 ARAALREAVELLKEGEWLLIFPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. Length = 118 |
| >gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 3e-10
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 312 GVLFICSHRTLLDPIFLSTALGRPIPAVTYSLSR-------LSELISPIKTVRLTRDRAT 364
+ + +H++ LDP+ LS L + + + L L+ + + + R A
Sbjct: 15 PAIVVANHQSYLDPLLLSLLLPKRGRPLVFVAKDELLNLPLLGWLMRLLGCIFIDRKNAK 74
Query: 365 DA----SMIEKLLEKGDLV-ICPEGTTCREPFLLRFSA----LFAELTDEVVPVAMS 412
DA + +LL +G+LV I PEGT R LL F L E +VPVA+S
Sbjct: 75 DAANTLEYLVELLREGELVLIFPEGTRSRGGELLPFKKGAFRLAREAGVPIVPVAIS 131
|
This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene. Length = 131 |
| >gnl|CDD|233436 TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 1e-09
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 34 DVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATF 93
D DGTL + F + +A + L L +L+ FL + A R
Sbjct: 5 DFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDAL 64
Query: 94 AGMKVPSIESVARAVLPKFYSGDLHPET---WRVFSSCGRRCVL-TANPRIMVEAFLKDF 149
AG+ + ++ + + L+PE R + G VL +A+ I+V+ +
Sbjct: 65 AGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR-I 123
Query: 150 LGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLG-DDEEMPDI-GLGDRKT 206
LG D IGT + + G TG + G+ K AL ++L + ++ D GD +
Sbjct: 124 LGIDNAIGTRLEESEDGIYTGNIDGN-NCKGEGKVHALAELLAEEQIDLKDSYAYGDSIS 182
Query: 207 DSLFLNLCKESYMVPPNPK 225
D L+L Y+V P+ K
Sbjct: 183 DLPLLSLVGHPYVVNPDKK 201
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in This model possess PSPase activity. OMNI|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog [Unknown function, Enzymes of unknown specificity]. Length = 202 |
| >gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 5e-08
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 31/223 (13%)
Query: 252 FMALLTILWIPVGFLLACLRMAAGALLPMPLVY--------YAFWALGVRVYIKGTPPPP 303
+ALL IL I L L + A L P++ G+RV ++G P
Sbjct: 2 RLALLLILVILFLLLPLPLALIALFRLRRPVLRRWLRFLVLLLLLLFGLRVEVEGLENLP 61
Query: 304 AQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIP---AVTYSLSR---LSELISPIKTVR 357
L + +H++ LDP+ LS AL R P L + L L+ + +
Sbjct: 62 KGG-----PALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLGAIP 116
Query: 358 LTRDRATDASM---IEKLLEKGD-LVICPEGT-TCREPFLLRF---SALFAELTDE-VVP 408
+ R+ D ++ + +L G LVI PEGT + LL F +A A +VP
Sbjct: 117 VDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVP 176
Query: 409 VAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLP 451
VA+ +F + + A L +L
Sbjct: 177 VAIVGAEELF---PSLKKGKVKVRIGPPIDISALPEPLLPELA 216
|
Length = 255 |
| >gnl|CDD|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 7e-08
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 40/229 (17%)
Query: 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL--------- 332
++ +AF + + G P PP + + + +H + +DP+ L + L
Sbjct: 3 VLLFAFG--FYVIKVHGKPDPP------EAPRIIVANHTSFIDPLILFSDLFPSIVAKKE 54
Query: 333 GRPIPAVTYSLSRL-------SELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGT 385
+P + L L SE K V ++RATD ++I PEGT
Sbjct: 55 LGKLPFIGTILRALGCIFVDRSEPKDRKKVVEEIKERATD-------PNWPPILIFPEGT 107
Query: 386 TCREPFLLRFSALFAELTDEVV-PVAMS-NRMSMFHGTTARGWKGMDPFYFFMNPSPAY- 442
T L+ F A V PVA+ + + G+ + + + PA
Sbjct: 108 TTNGKALIMFK-KGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYLFRLLT-QPANV 165
Query: 443 -EVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKY 490
EV FL Y + G+ + AN ++ ++A L T +T +DK
Sbjct: 166 LEVEFLP--VYTPS-EEGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211 |
| >gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 37/188 (19%), Positives = 57/188 (30%), Gaps = 30/188 (15%)
Query: 31 VVADVDGTLLRGRSSFPY---FALVAFEVGGVLRLLLLLLLSPLAGFL----YYYVSESA 83
+ D DGTL R S EV + RL +S + S S
Sbjct: 2 AIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSE 61
Query: 84 GIRVLIFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVL-TANPRIMV 142
+ A + ++ AR E G V+ + V
Sbjct: 62 EVAKEFLA-----RQVALRPGAR-------------ELISWLKERGIDTVIVSGGFDFFV 103
Query: 143 EAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD--I 199
E + LG D V + G TG ++ G+ K L ++L + + I
Sbjct: 104 EPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKII 162
Query: 200 GLGDRKTD 207
+GD D
Sbjct: 163 AVGDSVND 170
|
This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 100.0 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 100.0 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 100.0 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 100.0 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 100.0 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 100.0 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 100.0 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.97 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.97 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.97 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.96 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.95 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.94 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.93 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.91 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.9 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.9 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.9 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.89 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.89 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.88 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.86 | |
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.86 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.86 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.86 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.83 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.82 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.82 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.81 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.81 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.81 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.79 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.79 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.79 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.76 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.76 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.76 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.73 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.72 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.7 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.68 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.67 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.64 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.64 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.64 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.58 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.56 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 99.54 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.5 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.49 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.48 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.39 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.23 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.22 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 99.09 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.9 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.87 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 98.77 | |
| KOG2898 | 354 | consensus Predicted phosphate acyltransferase, con | 98.77 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.74 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.74 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.71 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.7 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.68 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.55 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 98.54 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.48 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.46 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.41 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.37 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 98.36 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.36 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 98.35 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.35 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 98.33 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.33 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.32 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 98.29 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.23 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.23 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.21 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 98.21 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.21 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 98.18 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 98.18 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.16 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 98.14 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.14 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.14 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 98.1 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 98.09 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.08 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.07 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.04 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 98.0 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.98 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 97.97 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.96 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 97.94 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.93 | |
| PLN02940 | 382 | riboflavin kinase | 97.87 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.78 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.77 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.77 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 97.75 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.74 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 97.73 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 97.72 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 97.71 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.68 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.67 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.64 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.63 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.61 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.57 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.56 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.55 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 97.5 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.5 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.47 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 97.45 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.38 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.34 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.32 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.29 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 97.11 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.09 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.08 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 97.03 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 97.01 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 97.0 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.99 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 96.89 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 96.89 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.86 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.83 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.8 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 96.79 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 96.78 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.78 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 96.74 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.68 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.62 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.61 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.61 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.58 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.57 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.56 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.55 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.54 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.52 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.47 | |
| PLN02887 | 580 | hydrolase family protein | 96.46 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 96.41 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.4 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.39 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 96.35 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.32 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.31 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 96.3 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.16 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 96.12 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.01 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 95.88 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.85 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.83 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.82 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.73 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 95.71 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.65 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 95.63 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 95.59 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 95.57 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.49 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 95.48 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 95.45 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 95.37 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.3 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 95.16 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.14 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.09 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 95.08 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 95.03 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.03 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.0 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.92 | |
| PLN02811 | 220 | hydrolase | 94.85 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.62 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 94.44 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.38 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.36 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.26 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 93.99 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 93.85 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 93.62 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 93.35 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 92.38 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 92.27 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 91.09 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 90.97 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.86 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 90.24 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 90.22 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 90.11 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 88.87 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 88.08 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 88.02 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 87.46 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 87.19 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 86.88 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 85.58 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 84.99 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 84.87 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 84.7 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.62 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 84.33 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 84.24 | |
| PLN02423 | 245 | phosphomannomutase | 84.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 83.22 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 83.15 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 82.94 | |
| PLN02423 | 245 | phosphomannomutase | 81.91 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 81.91 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 81.81 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 81.69 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 81.63 | |
| PRK06769 | 173 | hypothetical protein; Validated | 81.19 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 80.87 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 80.63 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 80.25 |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-94 Score=757.64 Aligned_cols=492 Identities=59% Similarity=1.063 Sum_probs=445.6
Q ss_pred CCCCCCCCCccccccCCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHH
Q 042288 9 YGDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVL 88 (515)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 88 (515)
.|-|-.||+|++|+.+.++..+++|||||||++++|+|.+|++++.+.+++.+.+..+..+|.+...+....++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l 82 (497)
T PLN02177 3 MGASRRFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTF 82 (497)
T ss_pred ccccCCCCccccCCcccccccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHH
Confidence 36788899999999999999999999999999999999999988887778888887777677776654334455557788
Q ss_pred HHHHHcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEE-eCcee
Q 042288 89 IFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICV-YKGRS 167 (515)
Q Consensus 89 ~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~-~~G~~ 167 (515)
+...|+|++++++++++++|+++++...++++++++++++|+++|||||++.+|+||++++||+|+|+||++++ .||++
T Consensus 83 ~~~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~~~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~ 162 (497)
T PLN02177 83 VFIAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRA 162 (497)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEE
Confidence 88899999999999999999999888889999999999999889999999999999998668999999999999 59999
Q ss_pred eeEEecCC-ccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceEEccCccc
Q 042288 168 TGFVKSPG-VLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLV 246 (515)
Q Consensus 168 tG~i~~~~-~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~~ 246 (515)
||++.|+| | +|++|++++++.++. ....+|||||.+|+|||++|+++++||+++ ++.+.+++.--|++|||||++
T Consensus 163 TG~i~g~~~c-~Ge~Kv~rl~~~~g~--~~~~~aYgDS~sD~plL~~a~e~y~V~~~~-~~~~~~~~~~~~~~fhdgrl~ 238 (497)
T PLN02177 163 TGFMKKPGVL-VGDHKRDAVLKEFGD--ALPDLGLGDRETDHDFMSICKEGYMVPRTK-CEPLPRNKLLSPVIFHEGRLV 238 (497)
T ss_pred eeeecCCCCC-ccHHHHHHHHHHhCC--CCceEEEECCccHHHHHHhCCccEEeCCCC-CCcCCcccCCCceeeeCCccc
Confidence 99999985 6 999999999988774 234599999999999999999999999966 999998667778999999999
Q ss_pred CCcchhhHHHHhhhHHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHH
Q 042288 247 QKPTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPI 326 (515)
Q Consensus 247 ~~p~~~~~l~~~l~~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~ 326 (515)
++|++.++|++++|+|+|++++++|+++++.+|.+|++.+++++|++++|+|.+|+|.. ..++|+|+||||+|++|++
T Consensus 239 ~~p~~~~~l~~~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~~--~~~~~~l~v~NHqS~lD~~ 316 (497)
T PLN02177 239 QRPTPLVALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPK--KGQPGVLFVCNHRTVLDPV 316 (497)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCcc--cCCCCeEEEECCCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999998721 0147999999999999999
Q ss_pred HHHHhcCCCccEEEecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcE
Q 042288 327 FLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEV 406 (515)
Q Consensus 327 ~l~~~~~~~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pV 406 (515)
++...+++++.++++++..++++++.++++++||++.++..++++.+++|+++|||||||++++.+++||+||+++.+||
T Consensus 317 ~l~~al~~~~~~v~~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~lvIFPEGTrs~~~~l~~Fk~~fa~l~~pI 396 (497)
T PLN02177 317 VTAVALGRKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRI 396 (497)
T ss_pred HHHHHcCCCeEEEeehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCCEEECcCcCCCCCCCcchHHHHHHHHCCcE
Confidence 99999998889999887778999999999999999877767788889999999999999999999999999998888999
Q ss_pred EEEEEEcCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCH
Q 042288 407 VPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTR 486 (515)
Q Consensus 407 vPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~ 486 (515)
|||+|.++..++.+++..+|+++|++|++++|.+.++|+||+|+++++.+..+++..|+|++||+.|++.|++++|.+|+
T Consensus 397 VPVAI~~~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq~~i~~~lg~~~t~~tr 476 (497)
T PLN02177 397 VPVAINTKQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTR 476 (497)
T ss_pred EEEEEEcccccccccccccceecchhhhhcCCCceEEEEECCCCChhhcccCCCCHHHHHHHHHHHHHHhhCceeccccH
Confidence 99999998888898888999999999999999999999999999998654468999999999999999999999999999
Q ss_pred HHHHHHHccCCCccccchhh
Q 042288 487 KDKYRALAGNDGTVVEKPAK 506 (515)
Q Consensus 487 ~d~~~~~~~~~~~~~~~~~~ 506 (515)
+|||+.||||||+|..++-|
T Consensus 477 ~dk~~~l~gn~g~v~~~~~~ 496 (497)
T PLN02177 477 KDKYAILAGTDGRVPSKKEK 496 (497)
T ss_pred HHHHHHhcCCCccccCCCCC
Confidence 99999999999999877643
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-86 Score=682.17 Aligned_cols=486 Identities=55% Similarity=0.947 Sum_probs=441.1
Q ss_pred CCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHH
Q 042288 24 IGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIES 103 (515)
Q Consensus 24 ~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~ 103 (515)
+++++..++|||||||+.+.|+|++|++.+.+.++..+.+.++..+|.+++++.....+.++|.++...|+|++++++++
T Consensus 4 ~~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~v~f~Gl~~~die~ 83 (498)
T PLN02499 4 SGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIFVATAGVHESEIES 83 (498)
T ss_pred CCcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHHHHhCCCCHHHHHH
Confidence 45677889999999999988889999987778788888888888899998875433344558889999999999999999
Q ss_pred HHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeC-ceeeeEEecCCccccccH
Q 042288 104 VARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~-G~~tG~i~~~~~~~g~~K 182 (515)
.++.++++++.+.+++++++.+++.|+++||||||+.+||||+++|||+|.|+||++++.+ |++||.+.|.|| ++.|
T Consensus 84 vaRavlpkf~~~dv~~e~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~--~ek~ 161 (498)
T PLN02499 84 VARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDV--DQSV 161 (498)
T ss_pred HHHHHhhHHHHhhCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCcc--HHHH
Confidence 9999999999999999999999998888999999999999999999999999999999985 999999999887 6666
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCC--CCCCcccccCCCCceEEccCcccCCcchhhHHHHhhh
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN--PKVDPVSQDKLPKPIVFHDGRLVQKPTPFMALLTILW 260 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~--~~l~~~A~~~~~W~i~f~~~r~~~~p~~~~~l~~~l~ 260 (515)
++++++.++. ..+++++||+.+|.+++..|+.-++++.. +.++.+.++++--|++|||||++++|++.++|++++|
T Consensus 162 ~~rl~~~~g~--~~~~vg~~~~~~~~~f~~~ck~~~~~~~~~~~~~~~~~~~~~~~p~ifhdgrl~~~ptp~~~l~~~~w 239 (498)
T PLN02499 162 ANRVANLFVD--ERPQLGLGRISASSSFLSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILLW 239 (498)
T ss_pred HHHHHHHhCc--cCceecccCCcccchhhhhCceEEecCcccccccccCccccCCCCeEEeCCcccCCCCHHHHHHHHHH
Confidence 9999999886 46789999999999999999977776643 3455555544445889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEE
Q 042288 261 IPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVT 340 (515)
Q Consensus 261 ~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~ 340 (515)
+|+|++++++|++.+..+|.|....+..++|++++|+|.||+|.. ..++|+|+||||+|++|++++..++++++.+++
T Consensus 240 ~P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~--~~~~gvL~v~NH~S~lDp~~l~~al~R~v~~va 317 (498)
T PLN02499 240 IPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPAS--GGNSGVLFVCTHRTLMDPVVLSTVLGRSIPAVT 317 (498)
T ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCc--CCCCCEEEEeCCCCcccHHHHHHHcCCceeehH
Confidence 999999999999999999999888899999999999999999831 012699999999999999999999999999999
Q ss_pred ecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccC
Q 042288 341 YSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHG 420 (515)
Q Consensus 341 k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~ 420 (515)
+.++.++++++.+++++++|++..+.+++++.|++|.++|||||||++++.|++|++|++++.+|||||+|....+++++
T Consensus 318 y~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~~~~f~g 397 (498)
T PLN02499 318 YSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHA 397 (498)
T ss_pred hhHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCCEEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEeccceEEE
Confidence 88899999999999999999987777889999999999999999999999999999999998899999999999999999
Q ss_pred cccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHccCCCcc
Q 042288 421 TTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTV 500 (515)
Q Consensus 421 ~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~~~~~~~ 500 (515)
++++||+++|++|++++|.+.++|+||++++.+..++.+++..|+|+.||+.|+++||+++|++|++|||++||||||+|
T Consensus 398 tta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~lagndg~v 477 (498)
T PLN02499 398 TTARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 477 (498)
T ss_pred EcCCCCchhhhhhheecCCceEEEEEcCCCChhhccCCCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHhcCCCccc
Confidence 99899999999999999999999999999999877666899999999999999999999999999999999999999999
Q ss_pred ccchhhhhhccccCC
Q 042288 501 VEKPAKLAANKIMGC 515 (515)
Q Consensus 501 ~~~~~~~~~~~~~~~ 515 (515)
..++-+-.++|+|||
T Consensus 478 ~~~~~~~~~~~~~~~ 492 (498)
T PLN02499 478 SYLSFLDQLKKVVST 492 (498)
T ss_pred cCccchhHHHhhhhc
Confidence 999988888999998
|
|
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-75 Score=601.25 Aligned_cols=465 Identities=42% Similarity=0.767 Sum_probs=412.7
Q ss_pred CCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHH
Q 042288 24 IGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIES 103 (515)
Q Consensus 24 ~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~ 103 (515)
+..+...+++|+||||+.+.|+|++|+..+++.++++|.+.++..+|.+++. +++.+++.++...|.|+.+++++
T Consensus 46 ~~~~~~t~v~d~~g~Ll~s~s~FpyfmlvA~Eag~~lR~l~Ll~~~P~~~~~----~~~~~~~~m~~v~f~Gl~~~~~~- 120 (525)
T PLN02588 46 QDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLYPFISLM----SYEMGLKTMVMLSFFGVKKESFR- 120 (525)
T ss_pred cccccceEEEecccceeccCCCCcceeeeeeccccHHHHHHHHHHhHHHHHh----ccchhhHHhHHHhhcCCcHHHhh-
Confidence 4556778999999999999999999999889999999999999999999864 35566888889999999999888
Q ss_pred HHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHH
Q 042288 104 VARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKA 183 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~ 183 (515)
+++..+++++.+.+.+|+++..+.-|++++||+.|..+||+++++|||+|.|+|||+++..|++||.+.+. .|.
T Consensus 121 v~ravLPkf~~~dv~~e~~~v~~~~~~~~vv~~~PrvMve~Flkeyl~~d~V~g~El~~~~g~~tG~~~~~------~~~ 194 (525)
T PLN02588 121 AGKAVLPKYFLEDVGLEMFQVLKRGGKRVGVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMEDK------KKH 194 (525)
T ss_pred hHHhhccHHHHhhcCHHHHHHHhhcCcEEEEecCCHHHHHHHHHHhcCcceEeeeeEEEeeeEEEEEEccc------chH
Confidence 99999999999999999999887777889999999999999999999999999999999999999999753 344
Q ss_pred HHHHH-HhcCC--CCCceEEEeCC---cCcHHHHhccccceeeCCCCC--CCcccccCCCCceEEccCcccCCcchhhHH
Q 042288 184 GALMK-MLGDD--EEMPDIGLGDR---KTDSLFLNLCKESYMVPPNPK--VDPVSQDKLPKPIVFHDGRLVQKPTPFMAL 255 (515)
Q Consensus 184 ~~l~~-~~~~~--~~~~~~aygDS---~~DlpmL~~a~~~~~Vnp~~~--l~~~A~~~~~W~i~f~~~r~~~~p~~~~~l 255 (515)
....+ .++.. +.+.++++||+ .+|.+....|++.++|+++++ ++.+.+++.--|++|||||++++|++.++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~~~~~~~~~~p~~~~~~pliFHDGRL~~rPtp~~~l 274 (525)
T PLN02588 195 ELAFDKVVQEERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGRLAIKPTPLNTL 274 (525)
T ss_pred HHHHHHHhcccCcccccceeecccCcccccchhHHhCcceEEeChhhccccccCCcccCCCceeEeCCcccCCCChHHHH
Confidence 44443 45442 11238899998 899999999999999999776 888888667778999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC-C
Q 042288 256 LTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG-R 334 (515)
Q Consensus 256 ~~~l~~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~-~ 334 (515)
++++|+|+|++++++|+++++.+|.+++..++.++|++++++|....+. ..++|+|+||||+|++|++++...++ +
T Consensus 275 ~~~~wlP~g~~La~~R~~~~~~lP~~~~~~~~~~~Gvrl~v~g~~p~~~---~~~~gvI~V~NH~S~LDPi~L~~Al~rr 351 (525)
T PLN02588 275 VLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISS---DRKKGCLFVCNHRTLLDPLYISYALRKK 351 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHcCcEEEEEeCCCCCC---CCCCCEEEEECCcchhhHHHHHHHcccC
Confidence 9999999999999999999999999999999999999999996543321 03579999999999999999999886 5
Q ss_pred CccEEEecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcC
Q 042288 335 PIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNR 414 (515)
Q Consensus 335 ~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~ 414 (515)
++.++.+++++++++++.+++++|||++.++.+++++.+++|.++|||||||++++.|++||+|++++..|||||+|+++
T Consensus 352 ~I~~mtFsip~lg~lL~~i~ti~VdRdr~~D~~aI~~LLk~GdlVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~~ 431 (525)
T PLN02588 352 NIKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSH 431 (525)
T ss_pred cceEEEEEhHHHHHHHHhcCceeecCCCcchHHHHHHHHhCCCEEEccCccccCCCcccChhhhHHHhcCceeeEEEEEe
Confidence 58888888999999999999999999987777888888999988999999999999999999998877899999999999
Q ss_pred ccCccCcccCCCccCCccccccCCCCeEEEEEeccccC--ccccC---CCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 042288 415 MSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPY--ELTCS---AGKSSHDVANYIQRLIATSLSYECTSFTRKDK 489 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~--~~~~~---~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~ 489 (515)
..++.++++.||+++|++|++++|.+.++|+|||+++. +..++ .+++..|+|++||..|++.||+++|.+|++||
T Consensus 432 ~~~f~gtt~~g~k~~D~~~fl~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~dk 511 (525)
T PLN02588 432 VTFFYGTTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRDK 511 (525)
T ss_pred ccccceeecCCCcccceeEEEecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhhh
Confidence 88999988899999999999999999999999999986 32333 26888999999999999999999999999999
Q ss_pred HHHHccCCCcccc
Q 042288 490 YRALAGNDGTVVE 502 (515)
Q Consensus 490 ~~~~~~~~~~~~~ 502 (515)
|+.||||||+|+.
T Consensus 512 Y~~LaGndG~v~~ 524 (525)
T PLN02588 512 YLILAGNNGVVKK 524 (525)
T ss_pred hheecCCCcccCC
Confidence 9999999999853
|
|
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=279.25 Aligned_cols=182 Identities=16% Similarity=0.225 Sum_probs=153.5
Q ss_pred ccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcC
Q 042288 278 LPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPI 353 (515)
Q Consensus 278 ~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~ 353 (515)
...+|...+.+.+|+|++++|.|+++ +++|+|+||||||.||++.|+..+|..+..++|+ +|++||.+.+.
T Consensus 61 ~a~~~~~~~~y~~g~r~ev~g~E~L~-----~~~p~ViVsNHQS~LDil~m~~i~p~~cvviaKr~L~yvp~~gl~m~L~ 135 (276)
T KOG2848|consen 61 IAKLWFHSMKYLLGLRFEVRGEENLP-----KSKPAVIVSNHQSSLDILGMGSIWPKNCVVIAKRSLFYVPIFGLAMYLS 135 (276)
T ss_pred HHHHHHHHHhhhcceEEEEechhhCC-----ccCCeEEEecchhHHHHHHHHhhcCCceEEEEeeeeeecchHHHHHHHc
Confidence 33457777888999999999999999 6789999999999999999999999999999998 79999999999
Q ss_pred CeeEEecCChhh----HHHHHHHHHcC--CeEEecCCeeeCCCccccccch-h---hccCCcEEEEEEEcCccCccCccc
Q 042288 354 KTVRLTRDRATD----ASMIEKLLEKG--DLVICPEGTTCREPFLLRFSAL-F---AELTDEVVPVAMSNRMSMFHGTTA 423 (515)
Q Consensus 354 ~~i~idR~~~~~----~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~G-f---~~~~~pVvPV~i~~~~~~~~~~~~ 423 (515)
|++||||.++++ ++++.+.++++ ++++||||||+.++.|+|||+| | .++++||+||+++.+........
T Consensus 136 gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~~~~- 214 (276)
T KOG2848|consen 136 GVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYSTKE- 214 (276)
T ss_pred CceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEecccccccCcc-
Confidence 999999998866 56667777766 8999999999999999999999 5 78899999999999654332111
Q ss_pred CCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcC
Q 042288 424 RGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 424 ~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~ 478 (515)
..++.|. +.|++||||+++.. ...+..++++++|+.|.+.+.
T Consensus 215 ----------k~f~sG~-v~V~vL~pI~Tegl--T~ddv~~L~~~~R~~M~~~~~ 256 (276)
T KOG2848|consen 215 ----------KVFNSGN-VIVRVLPPIPTEGL--TKDDVDVLSDECRSAMLETFK 256 (276)
T ss_pred ----------ceeecce-EEEEEcCCCCccCC--CcccHHHHHHHHHHHHHHHHH
Confidence 3456677 99999999999832 134456899999999998654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=273.26 Aligned_cols=193 Identities=20% Similarity=0.284 Sum_probs=148.2
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcc----cCcccHHHHHHHHHHHcCCCHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYY----YVSESAGIRVLIFATFAGMKVPSIE 102 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----l~~~~~~~~~~~~~~~~G~~~~~l~ 102 (515)
+.++|+|||||||+++||...|+.+. .+ +.....+..++..+ .+.++. ...+. .++.+++.+++|+++++++
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~-~~-~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~g~~~~~l~ 79 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFL-LR-HLPLNALLVIPLLP-IIAIALLIGGRAARW-PMSLLLWACTFGHREAHLQ 79 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHH-HH-HhHHHHHHHHHHHH-HHHHhhcccccccch-hhHHHHHHHHcCCCHHHHH
Confidence 67999999999999999977676543 32 11112222111111 111211 11222 2456778899999999999
Q ss_pred HHHHHHhchhhcC-CCcHHHHHHH----HhCC-CEEEEecCcHHHHHHHHHhhcCC---cEEEeceEEEeCceeeeEEec
Q 042288 103 SVARAVLPKFYSG-DLHPETWRVF----SSCG-RRCVLTANPRIMVEAFLKDFLGA---DMVIGTEICVYKGRSTGFVKS 173 (515)
Q Consensus 103 ~~~~~~~~~~~~~-~~~~~~~~~l----~~~G-~~vivSaS~~~~v~~ia~~~lGi---d~vigt~l~~~~G~~tG~i~~ 173 (515)
+++++|.+.+... .++|.+.+.+ +++| .++|||||++.+++++++. +|+ +++|||++++++| |++.|
T Consensus 80 ~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i~t~le~~~g---g~~~g 155 (210)
T TIGR01545 80 DLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLIASQIERGNG---GWVLP 155 (210)
T ss_pred HHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEEEEEeEEeCC---ceEcC
Confidence 9999998776554 5788888855 2479 5577999999999999986 554 8999999999877 88999
Q ss_pred CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcc
Q 042288 174 PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPV 229 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 229 (515)
+|| +|++|+++|+++++. +...++|||||.||+|||+.|++|++||||++|+++
T Consensus 156 ~~c-~g~~Kv~rl~~~~~~-~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~~ 209 (210)
T TIGR01545 156 LRC-LGHEKVAQLEQKIGS-PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQL 209 (210)
T ss_pred ccC-CChHHHHHHHHHhCC-ChhheEEecCCcccHHHHHhCCCcEEECcchHhccc
Confidence 999 999999999999974 234578999999999999999999999999999975
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=270.27 Aligned_cols=196 Identities=22% Similarity=0.327 Sum_probs=157.2
Q ss_pred HHHhHh-cceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEE
Q 042288 284 YYAFWA-LGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 284 ~~l~~~-~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
|.++++ .|++++++|.+++| ++|+|+||||+|++|++++.+. .+..+++|+ +|++|+++...|+++|
T Consensus 2 r~~~~~~~~~~~~v~g~~~~p------~~~~iiv~NH~S~~D~~~l~~~--~~~~fv~k~el~~~p~~g~~~~~~g~i~v 73 (211)
T cd07991 2 RVLLFAFGFYVIKVHGKPDPP------EAPRIIVANHTSFIDPLILFSD--LFPSIVAKKELGKLPFIGTILRALGCIFV 73 (211)
T ss_pred eEEEEEEEEEEEEEECCCCCC------CCCeEEEECCCcHHHHHHHhhh--cCcEEEEehhhccCcHHHHHHHhCCceEE
Confidence 344555 67999999999996 5799999999999999999987 466889987 7999999999999999
Q ss_pred ecCChhh----HHHHHHHHH--cC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccC-ccCcccCCCcc-C
Q 042288 359 TRDRATD----ASMIEKLLE--KG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSM-FHGTTARGWKG-M 429 (515)
Q Consensus 359 dR~~~~~----~~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~-~~~~~~~~~~~-~ 429 (515)
||+++++ ++.+.+.++ +| +|+||||||||+++.+++||+|++++++|||||+|+|.... +......++.. .
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~ 153 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLM 153 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHHH
Confidence 9988643 566777777 46 99999999999999999999998889999999999995431 11111011111 1
Q ss_pred CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 042288 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKY 490 (515)
Q Consensus 430 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~ 490 (515)
+.++.+..+...++|+|||||+++ . ++++++++++++|+.|++.++.++|++|.+||+
T Consensus 154 ~l~~~l~~~~~~v~v~~l~pi~~~-~--~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~~ 211 (211)
T cd07991 154 YLFRLLTQPANVLEVEFLPVYTPS-E--EGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211 (211)
T ss_pred HHHHHhCCcceEEEEEECCCcccc-c--CCCCHHHHHHHHHHHHHHhcCCCccCCCCcccC
Confidence 223334455566999999999983 1 378999999999999999999999999999984
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=262.71 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=145.2
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeE
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVR 357 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~ 357 (515)
+.+.+++++|++++++|.|++| .++|+|+||||+|++|++++...++++..+++|+ +|++||+++..|+++
T Consensus 41 ~~~~~~~~~g~~v~v~g~e~~p-----~~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~~g~i~ 115 (245)
T PRK15018 41 MFGRLAPLFGLKVECRKPADAE-----SYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLL 115 (245)
T ss_pred HHHHHHHHcCeEEEEEccCCCC-----CCCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHhCCCeE
Confidence 4455667899999999999998 5789999999999999999988777777899997 799999999999999
Q ss_pred EecCChhh----HHHHHHHHHc-C-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCc
Q 042288 358 LTRDRATD----ASMIEKLLEK-G-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWK 427 (515)
Q Consensus 358 idR~~~~~----~~~~~~~l~~-G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~ 427 (515)
|||+++++ ++++.+.+++ | +++||||||||.++.+.+||+|+ .++++||+||+|.++...+..
T Consensus 116 VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~~------- 188 (245)
T PRK15018 116 IDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINL------- 188 (245)
T ss_pred EeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECccccccc-------
Confidence 99988654 5566667765 6 89999999999999999999994 678999999999996432211
Q ss_pred cCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 428 GMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 428 ~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
..+++++ ++|+++|||+++++ +..+.+++++++++.|++.+
T Consensus 189 ------~~~~~g~-i~v~~~~PI~~~~~--~~~~~~~l~~~v~~~i~~~~ 229 (245)
T PRK15018 189 ------NRLHNGL-VIVEMLPPIDVSQY--GKDQVRELAAHCRSIMEQKI 229 (245)
T ss_pred ------CCccCee-EEEEEcCCCcCCCC--ChhhHHHHHHHHHHHHHHHH
Confidence 1234666 99999999999754 23567899999999999865
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=249.57 Aligned_cols=193 Identities=20% Similarity=0.287 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhc-ccCccc----HHHHHHHHHHHcCCCHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLY-YYVSES----AGIRVLIFATFAGMKVPSI 101 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~~~----~~~~~~~~~~~~G~~~~~l 101 (515)
++++++|||||||+.+++...|+.....+ .. ..... ..+.....+ .+.... .....+++..+.|++.+++
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~-~g-~~~~~---~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRR-QP-LNLLL---VLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHh-cc-hhhHH---HhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 67899999999999888755554333122 11 11111 111111111 121111 1112345556679999999
Q ss_pred HHHHHHHhchhhc-CCCcHHHHHHH----HhCC-CEEEEecCcHHHHHHHHHhhcC---CcEEEeceEEEeCceeeeEEe
Q 042288 102 ESVARAVLPKFYS-GDLHPETWRVF----SSCG-RRCVLTANPRIMVEAFLKDFLG---ADMVIGTEICVYKGRSTGFVK 172 (515)
Q Consensus 102 ~~~~~~~~~~~~~-~~~~~~~~~~l----~~~G-~~vivSaS~~~~v~~ia~~~lG---id~vigt~l~~~~G~~tG~i~ 172 (515)
+++.++|.+.+.. -..+|.+.+.+ +++| .++|||+|++.+++++++. +| ++++|||++++ ++||++.
T Consensus 80 ~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~~~~~i~t~l~~---~~tg~~~ 155 (211)
T PRK11590 80 QALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLPRVNLIASQMQR---RYGGWVL 155 (211)
T ss_pred HHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccccCceEEEEEEE---EEccEEC
Confidence 9999998654322 13477777755 3468 5677999999999999998 99 58999999987 7999999
Q ss_pred cCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 173 SPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 173 ~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
|+|| +|++|+++|++|++. +...++|||||.||+|||+.|++|++|||+++|++++
T Consensus 156 g~~c-~g~~K~~~l~~~~~~-~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~~~ 211 (211)
T PRK11590 156 TLRC-LGHEKVAQLERKIGT-PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQLE 211 (211)
T ss_pred CccC-CChHHHHHHHHHhCC-CcceEEEecCCcccHHHHHhCCCCEEECccHHhhccC
Confidence 9999 999999999999974 2445799999999999999999999999999998753
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-31 Score=250.06 Aligned_cols=194 Identities=24% Similarity=0.289 Sum_probs=150.5
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVA 105 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~ 105 (515)
+.+++++|||||||++ .+++.++... .+........ ....+.....-+ ...+....+++|++.++++++.
T Consensus 3 ~~~~L~vFD~D~TLi~-~~~~~~~~~~-~g~~~~v~~~-------t~~~~~~~~~~~-~~~~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-AELIDELARG-AGVGEEVLAI-------TERAMRGELDFE-ESLRLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh-HHHHHHHHHH-hCCHHHHHHH-------HHHHhcccccHH-HHHHHHHHHhCCCCHHHHHHHH
Confidence 4578999999999999 3334444322 2111111111 111111111111 1223456789999999999999
Q ss_pred HHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCcccccc
Q 042288 106 RAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKN 181 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~ 181 (515)
+++ ..++|. .+++|+++| +++|||||++++++|++++ ||+|+++|++++.+||.+||++.++.| .+++
T Consensus 73 ~~~------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~-~~~~ 144 (212)
T COG0560 73 EEF------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPIC-DGEG 144 (212)
T ss_pred Hhc------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeec-Ccch
Confidence 987 224554 455888999 5678999999999999999 999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCce
Q 042288 182 KAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPI 238 (515)
Q Consensus 182 K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i 238 (515)
|+++|++++...+.. .++|||||.||+|||+.|++|+++||++++++.|. .++|++
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~-~~~~~~ 202 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALAD-VRIWPI 202 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHH-HhcChh
Confidence 999999998875443 58999999999999999999999999999999999 999987
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=239.63 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=149.6
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHh
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVL 109 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~ 109 (515)
+|+|||||||++++|++.|+.....+..................+..+........++....+++|++.+++++++++++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 80 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV 80 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 48999999999999988887654332111111111111111122111111222224455667899999999999999999
Q ss_pred chhhcCCCcHHHHHH---HHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEE-eCceeeeEEecCCccccccHHH
Q 042288 110 PKFYSGDLHPETWRV---FSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICV-YKGRSTGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 110 ~~~~~~~~~~~~~~~---l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~-~~G~~tG~i~~~~~~~g~~K~~ 184 (515)
++.+...+++++.+. ++++| .++|+|+|++.++++++++ +|+++++|+++.+ +||.+||++.+++| .|++|++
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~~~~~g~~~g~~~~~~~-~g~~K~~ 158 (202)
T TIGR01490 81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLEESEDGIYTGNIDGNNC-KGEGKVH 158 (202)
T ss_pred HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceEEcCCCEEeCCccCCCC-CChHHHH
Confidence 987778888888775 45789 6678999999999999998 9999999999998 68999999999888 9999999
Q ss_pred HHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 185 ALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 185 ~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
+++++++..+.. .+++||||.+|+||++.|+++++|||+++|
T Consensus 159 ~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l 202 (202)
T TIGR01490 159 ALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL 202 (202)
T ss_pred HHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence 999998764322 479999999999999999999999999876
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=255.47 Aligned_cols=196 Identities=16% Similarity=0.233 Sum_probs=147.4
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccch-hhhhhcCCee
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRL-SELISPIKTV 356 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~-g~~~~~~~~i 356 (515)
+++.++..++..++++|.++.+ ++|+|+||||+|++|++++.+..+ ..+++|+ .+++ +++++..|++
T Consensus 140 ~~~~~~~~~~~~i~v~G~e~~~------~~~~IiVaNH~S~lDi~vL~s~~p--~~~v~kk~~~~~~~~~~~~~~~~g~I 211 (376)
T PLN02833 140 ICSAFVASWTGVIKYHGPRPSR------RPKQVFVANHTSMIDFIVLEQMTP--FAVIMQKHPGWVGFLQNTILESVGCI 211 (376)
T ss_pred HHHHHHHHhEEEEEEECCcCCC------CCCEEEEECCCChHHHHHHHhhcC--ceEEEEehhhhhHHHHHHHHHHcCcE
Confidence 3444455556678899988765 568999999999999999998764 3566775 2333 3677889999
Q ss_pred EEecCChhhH----HHHHHHHH--cC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccC--CCc
Q 042288 357 RLTRDRATDA----SMIEKLLE--KG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTAR--GWK 427 (515)
Q Consensus 357 ~idR~~~~~~----~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~--~~~ 427 (515)
+|||++.++. +.+++.++ +| +++||||||||+++.+++||+|++++++|||||+|+|.... .+..+. ...
T Consensus 212 ~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~-~~~fW~s~~~s 290 (376)
T PLN02833 212 WFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIF-VDAFWNSRKQS 290 (376)
T ss_pred EecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcc-cccccCCCCcc
Confidence 9999876553 34555555 57 99999999999999999999998899999999999986432 111010 011
Q ss_pred cC-CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 042288 428 GM-DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKY 490 (515)
Q Consensus 428 ~~-~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~ 490 (515)
+. +.++.+..+...++|+||||++++ ++++++++++++|+.|++.+|+...++...-||
T Consensus 291 ~~~~l~~ll~~~~~~v~V~~LpPi~~~----~~e~~~efA~rv~~~Ia~~lgi~~~~wdg~lk~ 350 (376)
T PLN02833 291 FTMHLLRLMTSWAVVCDVWYLEPQTLR----PGETPIEFAERVRDMIAKRAGLKKVPWDGYLKY 350 (376)
T ss_pred HHHhHHHHhCCCceEEEEEECCCcCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCceee
Confidence 11 223344556677999999999876 378999999999999999999999887655544
|
|
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=229.94 Aligned_cols=167 Identities=22% Similarity=0.310 Sum_probs=137.9
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
.++++++++|.+++|. .++|+|+||||+|++|++++.. ..+++.+++|+ +|++|+++...|+++|||++.+
T Consensus 32 ~~~~~~~v~g~e~lp~----~~~p~iiv~NH~S~~D~~~l~~-~~~~~~~v~k~~l~~~P~~g~~~~~~~~i~v~R~~~~ 106 (214)
T PLN02901 32 SPFYKIEVEGLENLPS----PDEPAVYVSNHQSFLDIYTLFH-LGRPFKFISKTSIFLIPIIGWAMYMTGHIPLKRMDRR 106 (214)
T ss_pred hcceeEEEECCccCCC----CCCcEEEEECCCCchHHHHHhh-cCCceEEEEEHHhhhccHHHHHHHHCCcEEEecCCcH
Confidence 4689999999999982 2579999999999999998865 45677899987 7999999999999999998764
Q ss_pred h----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCcc-CccCcccCCCccCCcccc
Q 042288 365 D----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMS-MFHGTTARGWKGMDPFYF 434 (515)
Q Consensus 365 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~-~~~~~~~~~~~~~~~~~~ 434 (515)
+ ++.+.+.|++| +++|||||||+.++.+.+|++|+ .+.++||+||++.|... ++.+. ++
T Consensus 107 ~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~-----------~~ 175 (214)
T PLN02901 107 SQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIMPNGK-----------EG 175 (214)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhCcCCC-----------cc
Confidence 3 56788899999 99999999999889999999994 45799999999998433 33322 12
Q ss_pred ccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 042288 435 FMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSY 479 (515)
Q Consensus 435 ~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~ 479 (515)
..+++. ++|++++||+++ +.+++++++++.|++.++.
T Consensus 176 ~~~~~~-i~v~~~~pi~~~-------~~~~l~~~~~~~i~~~~~~ 212 (214)
T PLN02901 176 ILNPGS-VKVVIHPPIEGS-------DADELCNEARKVIAESLVQ 212 (214)
T ss_pred cccCCe-EEEEECCCcCCC-------CHHHHHHHHHHHHHHHhhh
Confidence 345666 999999999864 5789999999999987653
|
|
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=228.36 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=120.2
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec----ccchhhhhhcCCeeEEecCCh---------hh----HHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS----LSRLSELISPIKTVRLTRDRA---------TD----ASM 368 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~----~~~~g~~~~~~~~i~idR~~~---------~~----~~~ 368 (515)
++|+|++|||+|++|++++...++. ++.+++|+ +|++||++...|+|+|+|++. +. .+.
T Consensus 128 ~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~ 207 (355)
T PTZ00261 128 RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQA 207 (355)
T ss_pred CCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHHH
Confidence 4689999999999999999998873 56889997 799999999999999998532 11 234
Q ss_pred HHHHHHcC-CeEEecCCeeeCCC-ccccccch-h---hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeE
Q 042288 369 IEKLLEKG-DLVICPEGTTCREP-FLLRFSAL-F---AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAY 442 (515)
Q Consensus 369 ~~~~l~~G-~l~IFPEGTrs~~~-~l~~Fk~G-f---~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 442 (515)
+.+.|++| +++||||||||.++ .+++||+| | .+.++||+|+++.|+...|.... +....|++ +
T Consensus 208 ~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP~g~----------~l~~~pg~-I 276 (355)
T PTZ00261 208 IDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWPWWM----------MIGGLPAD-M 276 (355)
T ss_pred HHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCCCCC----------ccCCCCce-E
Confidence 45789999 99999999999864 59999999 4 57899999999999654443220 11224666 9
Q ss_pred EEEEec-cccCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 042288 443 EVTFLN-KLPYELTCSAGKSSHDVANYIQRLIATSLSY 479 (515)
Q Consensus 443 ~V~~l~-pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~ 479 (515)
+|+|++ ||+++ +.+.+++++.+++.|++..+.
T Consensus 277 ~V~iG~~PI~~~-----~~~~~eL~~~lr~lmqe~~~~ 309 (355)
T PTZ00261 277 HIRIGAYPIDYD-----RDSSKDVAVGLQQRMQKVRDE 309 (355)
T ss_pred EEEECCCCCCCC-----CCCHHHHHHHHHHHHHHHHHH
Confidence 999999 99986 567777777777666665443
|
|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=208.44 Aligned_cols=151 Identities=21% Similarity=0.297 Sum_probs=127.5
Q ss_pred HHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCC-CCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCe
Q 042288 281 PLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHR-TLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKT 355 (515)
Q Consensus 281 ~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~-S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~ 355 (515)
+|++.++++++.+++|+|.|++| .++|+|++|||+ |++|++++....++++.+++++ .|++++++..+|+
T Consensus 3 ~~~~~~~~~~~~~v~v~G~e~lp-----~~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~~~~~g~ 77 (203)
T cd07992 3 LLSRVILRIYFRRITVVGRENVP-----KDGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWLLESFGA 77 (203)
T ss_pred EehhehhhhEeeeeEEECCccCC-----CCCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHHHHHcCc
Confidence 36788888999999999999998 678999999999 6899999998888888999987 5889999999999
Q ss_pred eEEecCCh------------hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh---h-------ccCCcEEEEEEE
Q 042288 356 VRLTRDRA------------TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF---A-------ELTDEVVPVAMS 412 (515)
Q Consensus 356 i~idR~~~------------~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf---~-------~~~~pVvPV~i~ 412 (515)
++|+|++. ..++.+.+.|++| +++|||||||+.++.+.+||+|+ + ..++||+||+|.
T Consensus 78 ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~ 157 (203)
T cd07992 78 IPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLN 157 (203)
T ss_pred eEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEE
Confidence 99999753 2356788899999 99999999999889999999994 2 268999999999
Q ss_pred cCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccc
Q 042288 413 NRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
|.... .+..+++|.|++||.+++.
T Consensus 158 ~~~~~-------------------~~~~~i~i~~g~pi~~~~~ 181 (203)
T cd07992 158 YEDKS-------------------RFRSRVLVEFGKPISVSAF 181 (203)
T ss_pred eCCCC-------------------CCCCeEEEEECCCcccccc
Confidence 85321 1123499999999988754
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=198.81 Aligned_cols=132 Identities=18% Similarity=0.182 Sum_probs=108.1
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh---cCCCccEEEec----ccchhhhhhcCCee
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA---LGRPIPAVTYS----LSRLSELISPIKTV 356 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~---~~~~~~~v~k~----~~~~g~~~~~~~~i 356 (515)
+.+++++|++++ |. +|. .++|+|+||||+|++|++++... .++++.+++|+ +|+ |++++..|++
T Consensus 2 ~~~~~~~g~~~~--g~--~p~----~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~-g~~~~~~g~i 72 (163)
T cd07988 2 RLLLRLSGWRIE--GE--PPN----KPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPL-GPFMRWLGGI 72 (163)
T ss_pred ceEEEecCEEEE--eE--cCC----CCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcH-HHHHHHcCCE
Confidence 456778898865 43 341 24799999999999999998765 46778999997 688 9999999999
Q ss_pred EEecCChhh-HHHHHHHHHcC---CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCcc
Q 042288 357 RLTRDRATD-ASMIEKLLEKG---DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKG 428 (515)
Q Consensus 357 ~idR~~~~~-~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~ 428 (515)
+|||++... ++.+.+.+++| +++|||||||+.. .+||+|+ .++++||+||+|++..
T Consensus 73 ~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~~------------- 136 (163)
T cd07988 73 PVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYKR------------- 136 (163)
T ss_pred EeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecCc-------------
Confidence 999987644 77888888865 6999999999985 4899994 6789999999998741
Q ss_pred CCccccccCCCCeEEEEEeccccCc
Q 042288 429 MDPFYFFMNPSPAYEVTFLNKLPYE 453 (515)
Q Consensus 429 ~~~~~~~~~p~~~v~V~~l~pi~~~ 453 (515)
.+|+|+|||+++
T Consensus 137 -------------~~v~~g~pi~~~ 148 (163)
T cd07988 137 -------------KTVGIGPLFEPS 148 (163)
T ss_pred -------------EEEEECCcCcCC
Confidence 478999999986
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=204.72 Aligned_cols=152 Identities=28% Similarity=0.393 Sum_probs=125.2
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC--ccEEEec----ccchhhhhhcCCe
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP--IPAVTYS----LSRLSELISPIKT 355 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~--~~~v~k~----~~~~g~~~~~~~~ 355 (515)
+.+.+++.++.+++|+|.|++| .++|+|+||||+|++|++++....+.. +.+++|+ +|++|+++...|+
T Consensus 40 ~~~~~~~~~~~r~~v~G~e~lp-----~~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~~~~~~~ 114 (255)
T COG0204 40 LVLLLLLLFGLRVEVEGLENLP-----KGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLGA 114 (255)
T ss_pred HHHHHHHHhCceEEEEeeecCC-----CCCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHHHHHcCe
Confidence 4567778899999999999998 568999999999999999999988776 7899997 7899999999999
Q ss_pred eEEecCChhh--HHHHHHHHHc-C-CeEEecCCeeeCC-Cccccccchh----hccCCcEEEEEEEcCccCccCcccCCC
Q 042288 356 VRLTRDRATD--ASMIEKLLEK-G-DLVICPEGTTCRE-PFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGW 426 (515)
Q Consensus 356 i~idR~~~~~--~~~~~~~l~~-G-~l~IFPEGTrs~~-~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~ 426 (515)
+++||+++.. +....+.+++ | .++|||||||+++ ..+.+||.|+ .++++||+||++.|....+..
T Consensus 115 i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~------ 188 (255)
T COG0204 115 IPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPS------ 188 (255)
T ss_pred eEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccC------
Confidence 9999998753 4455555555 6 9999999999986 4599999994 567899999999996543221
Q ss_pred ccCCccccccCCCCeEEEEEeccccCcc
Q 042288 427 KGMDPFYFFMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 427 ~~~~~~~~~~~p~~~v~V~~l~pi~~~~ 454 (515)
..+.. +.+++++|+....
T Consensus 189 ---------~~~~~-~~~~~~~pi~~~~ 206 (255)
T COG0204 189 ---------LKKGK-VKVRIGPPIDISA 206 (255)
T ss_pred ---------CCcee-EEEEecCCcCccc
Confidence 11122 8899999998774
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-23 Score=230.52 Aligned_cols=187 Identities=17% Similarity=0.128 Sum_probs=141.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhhHH
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATDAS 367 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~~~ 367 (515)
++++++|.+++| .++|+|+||||+|++|++++..+++++..+++|+ +|+++++++..|+++|||++...++
T Consensus 14 ~~~~v~g~~~~~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~~~~~ 88 (718)
T PRK08043 14 YRVRVTGDTQAL-----KGERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKPMAIK 88 (718)
T ss_pred EEEEEEccccCC-----CCCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCHHHHH
Confidence 366688999998 5789999999999999999999998777788886 6889999999999999999988888
Q ss_pred HHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeE
Q 042288 368 MIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAY 442 (515)
Q Consensus 368 ~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 442 (515)
++.+.+++| +|+|||||||+.++.+.+||+|+ .++++|||||+|.+......... .... ...... .+
T Consensus 89 ~~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~~~------~~~~-~~~~~~-~i 160 (718)
T PRK08043 89 HLVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRL------KGLV-KRRLFP-QI 160 (718)
T ss_pred HHHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCccccc------CCcc-ccccCC-ce
Confidence 899999999 99999999999999999999993 56899999999998543211110 0000 011122 38
Q ss_pred EEEEeccccCcccc--CCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 042288 443 EVTFLNKLPYELTC--SAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491 (515)
Q Consensus 443 ~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~ 491 (515)
+|+|++|++..... .+.++.+.+++.+++.|.+.+....-..|..|...
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~ 211 (718)
T PRK08043 161 TLHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMAVRPRETLYEALL 211 (718)
T ss_pred EEEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 99999997542110 01223557888999999988776554445555443
|
|
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=199.96 Aligned_cols=168 Identities=17% Similarity=0.213 Sum_probs=120.1
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCC-CCcHHHHHHhc---CCCccEEEec----ccchhhhhhcCCeeEEecCCh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRT-LLDPIFLSTAL---GRPIPAVTYS----LSRLSELISPIKTVRLTRDRA 363 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S-~lD~~~l~~~~---~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~ 363 (515)
++++++|.|++| .++|+|+||||+| ++|++++.+++ +.++.+++|+ +|+++++ .++|||.+.
T Consensus 8 ~~v~v~G~e~lp-----~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~p~l~~~-----~i~v~r~~~ 77 (210)
T cd07986 8 LEVDVSGLENIP-----KDGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKIPELRDL-----FIPVDPLEG 77 (210)
T ss_pred EEEecCchhcCC-----CCCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhCcchHhh-----EEeccCCCC
Confidence 388899999998 6789999999987 59999987654 4567888887 3555554 588988754
Q ss_pred h--------hHHHHHHHHHcC-CeEEecCCeeeCCCc------cccccchh----hccCCcEEEEEEEcCccC-ccCccc
Q 042288 364 T--------DASMIEKLLEKG-DLVICPEGTTCREPF------LLRFSALF----AELTDEVVPVAMSNRMSM-FHGTTA 423 (515)
Q Consensus 364 ~--------~~~~~~~~l~~G-~l~IFPEGTrs~~~~------l~~Fk~Gf----~~~~~pVvPV~i~~~~~~-~~~~~~ 423 (515)
+ .++.+.+.|++| +++|||||||+..+. +.+||+|+ .++++||+||+|.+.... +....
T Consensus 78 ~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~- 156 (210)
T cd07986 78 RAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAG- 156 (210)
T ss_pred cchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHH-
Confidence 2 267788899999 999999999997543 68999995 567999999999984321 11000
Q ss_pred CCCccCC---ccc--cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHH
Q 042288 424 RGWKGMD---PFY--FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRL 472 (515)
Q Consensus 424 ~~~~~~~---~~~--~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ 472 (515)
..|.-.. ..+ +...+++ ++|+|++||+++++. ..++.+++++.+|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-v~v~~g~pI~~~~~~-~~~~~~~l~~~~~~~ 208 (210)
T cd07986 157 LIHPTLRTLLLPRELLNKRGKT-IRIRVGRPIPPEELA-RFEDAEELADFLRLH 208 (210)
T ss_pred ccCHHHHHHHHHHHHHHhCCCE-EEEEeCCcCCHHHHh-cCCCHHHHHHHHHHh
Confidence 0000000 001 1223445 999999999987542 246789999999874
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=238.73 Aligned_cols=175 Identities=15% Similarity=0.124 Sum_probs=135.0
Q ss_pred cceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh
Q 042288 290 LGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 290 ~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
..++++++|.||+|. .++|+|+||||+|++|++++...+|+++.+++|+ +|+++++++..|+++|||+++..
T Consensus 437 ~~~~~~~~g~~~~~~----~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~ 512 (1140)
T PRK06814 437 AFYRVEVKGLENLQK----AGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNPMA 512 (1140)
T ss_pred HeEEEEEeCCccccc----cCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCChHH
Confidence 468999999999982 2357999999999999999999999888999998 68899999999999999999888
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCC
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSP 440 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 440 (515)
++.+.+.+++| +++|||||||+.++.+.+||+|+ .++++||+||+|.+....+.... .+.+ ....++
T Consensus 513 ~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~~------~~~~-~~~~~~- 584 (1140)
T PRK06814 513 TRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSRL------KNQV-RRKWFP- 584 (1140)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCccccccccc------CCCc-ccccCC-
Confidence 88889999999 99999999999999999999994 56899999999998543211100 0000 111223
Q ss_pred eEEEEEeccccCcccc--CCCCCHHHHHHHHHHHHHHH
Q 042288 441 AYEVTFLNKLPYELTC--SAGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 441 ~v~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~ia~~ 476 (515)
+++|+++|||.+++.. ...+.++.+.+.+++.|.+.
T Consensus 585 ~~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~ 622 (1140)
T PRK06814 585 KVTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDM 622 (1140)
T ss_pred ceEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 4999999999876431 01223345555566655543
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=236.94 Aligned_cols=170 Identities=22% Similarity=0.298 Sum_probs=134.0
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
.++.+++++|.|++| .++|+|++|||+|++|++++...+++++.+++|+ +|+++++++..|+|+|||++.+
T Consensus 424 ~~~~~~~v~g~e~lp-----~~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~ 498 (1146)
T PRK08633 424 HTRYRLRVEGRENIP-----AKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGGSK 498 (1146)
T ss_pred HceEEEEEECCcCCC-----CCCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCChH
Confidence 456788999999998 6789999999999999999999999888999997 6889999999999999998865
Q ss_pred h-HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcC-ccCccCcccCCCccCCccccccC
Q 042288 365 D-ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNR-MSMFHGTTARGWKGMDPFYFFMN 437 (515)
Q Consensus 365 ~-~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~-~~~~~~~~~~~~~~~~~~~~~~~ 437 (515)
+ ++.+.+.+++| +++|||||||+.++.+.+||+|+ .++++|||||+|.+. ...+.... ..++ ..+....
T Consensus 499 ~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~~~~~-~~~~---~~~~~~~ 574 (1146)
T PRK08633 499 ESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIFSRAS-GKFL---WRWPTRI 574 (1146)
T ss_pred HHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEeccccccccccc-cccc---ccccCCC
Confidence 5 78888999999 99999999999999999999995 578999999999983 22211110 0000 0011223
Q ss_pred CCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHH
Q 042288 438 PSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIA 474 (515)
Q Consensus 438 p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia 474 (515)
+++ ++|+|++||+++ ...+++.+.+++...
T Consensus 575 ~~~-v~v~~~~pi~~~------~~~~~~~~~~~~l~~ 604 (1146)
T PRK08633 575 PYP-VTVAFGKPMPAH------STAHEVKQAVFELSF 604 (1146)
T ss_pred Cce-EEEEECCCcCcc------cCHHHHHHHHHHHHH
Confidence 444 999999999875 345666666655443
|
|
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-22 Score=199.27 Aligned_cols=123 Identities=20% Similarity=0.179 Sum_probs=102.1
Q ss_pred HHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHH-----HhcC-CCccEEEec----ccchhhhh
Q 042288 281 PLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLS-----TALG-RPIPAVTYS----LSRLSELI 350 (515)
Q Consensus 281 ~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~-----~~~~-~~~~~v~k~----~~~~g~~~ 350 (515)
++.+.....+|++++++|.|++| .++++|+++||+|.+|+.++. ..++ +++.+++|+ +|++++++
T Consensus 76 ~i~~~~~~~~~~~v~v~g~e~l~-----~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g~~~ 150 (315)
T PLN02783 76 FICKYACAYFPVRLHVEDEEAFD-----PNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLRHIW 150 (315)
T ss_pred HHHHHHHHhcCeEEEEEchhhCC-----CCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHHHHH
Confidence 35566666899999999999998 688999999999999988742 2355 577888887 79999999
Q ss_pred hcCCeeEEecCChhhHHHHHHHHHcC-CeEEecCCeee-----CC--Cccccccchh----hccCCcEEEEEEEcC
Q 042288 351 SPIKTVRLTRDRATDASMIEKLLEKG-DLVICPEGTTC-----RE--PFLLRFSALF----AELTDEVVPVAMSNR 414 (515)
Q Consensus 351 ~~~~~i~idR~~~~~~~~~~~~l~~G-~l~IFPEGTrs-----~~--~~l~~Fk~Gf----~~~~~pVvPV~i~~~ 414 (515)
..+|.+++||++ +.+.|++| +++|||||||+ .+ ..+++||+|| .++|+||+||++.+.
T Consensus 151 ~~~G~ipv~R~~------~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~ 220 (315)
T PLN02783 151 TWLGLDPASRKN------FTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQ 220 (315)
T ss_pred HHcCCeEEcHHH------HHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECc
Confidence 999999999974 56788899 99999999983 22 3356899995 678999999999994
|
|
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-22 Score=191.78 Aligned_cols=144 Identities=23% Similarity=0.279 Sum_probs=105.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC---CCccEEEec----ccchhhhhhcCCeeEEecCChhh------H-HHHHHHHHc
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG---RPIPAVTYS----LSRLSELISPIKTVRLTRDRATD------A-SMIEKLLEK 375 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~------~-~~~~~~l~~ 375 (515)
++|+|+||||+|++|++++...++ .++.+++++ +|++|++++.+|+++|+|++... + +.+.+.+++
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~ 100 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKN 100 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhC
Confidence 479999999999999999988753 356777765 67899999999999999986421 2 345678899
Q ss_pred C-CeEEecCCeeeCCCccccccchh----hcc-------CCcEEEEEEEcCccCccCccc----CC-C-c-----c-CCc
Q 042288 376 G-DLVICPEGTTCREPFLLRFSALF----AEL-------TDEVVPVAMSNRMSMFHGTTA----RG-W-K-----G-MDP 431 (515)
Q Consensus 376 G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~-------~~pVvPV~i~~~~~~~~~~~~----~~-~-~-----~-~~~ 431 (515)
| +++||||||||+++.+.+||+|+ .++ ++|||||+|.|.... .+... .+ . . . ...
T Consensus 101 g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 179 (205)
T cd07993 101 GQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVL-EEELYAEELLGPPKPKESLSGLLGA 179 (205)
T ss_pred CceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCccc-chHHHHHHHcCCCCCCccHHHHHHH
Confidence 9 99999999999999999999994 233 899999999995421 11100 01 0 0 0 011
Q ss_pred cccccCCCCeEEEEEeccccCcc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~ 454 (515)
+..+..+..+++|+|++||+.++
T Consensus 180 ~~~l~~~~g~v~v~~~~Pi~~~~ 202 (205)
T cd07993 180 SKILRENFGRIRVDFGEPISLRE 202 (205)
T ss_pred HHHhhccCCeEEEECCCCcCHHH
Confidence 11234444449999999998763
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.7e-22 Score=189.12 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=123.3
Q ss_pred eEE-EEcCCCCCCCCCCCCCCcEEEEeCCCCCC-cHHHHHHh-----cCCCccEEEec----ccchhhhhhcCCeeEEec
Q 042288 292 VRV-YIKGTPPPPAQKSSGQTGVLFICSHRTLL-DPIFLSTA-----LGRPIPAVTYS----LSRLSELISPIKTVRLTR 360 (515)
Q Consensus 292 vrv-~v~G~e~~p~~~~~~~~~~IiVaNH~S~l-D~~~l~~~-----~~~~~~~v~k~----~~~~g~~~~~~~~i~idR 360 (515)
.++ +|+|.|++| .++|+|+++||+|++ |++++... .++++.+++++ +|++++++..+|+++++|
T Consensus 5 ~~~~~v~g~e~lp-----~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r 79 (212)
T cd07987 5 FRVYEVRGLENIP-----DEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSR 79 (212)
T ss_pred eeeEEEeccccCC-----CCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCcccCH
Confidence 355 899999998 678999999999999 99999876 23556788765 577899999999999887
Q ss_pred CChhhHHHHHHHHHcC-CeEEecCCeeeCC-------Cccccccchh----hccCCcEEEEEEEcCccC-ccCcccCCCc
Q 042288 361 DRATDASMIEKLLEKG-DLVICPEGTTCRE-------PFLLRFSALF----AELTDEVVPVAMSNRMSM-FHGTTARGWK 427 (515)
Q Consensus 361 ~~~~~~~~~~~~l~~G-~l~IFPEGTrs~~-------~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~-~~~~~~~~~~ 427 (515)
+ .+.+.|++| +++|||||||+.. ..+.+||+|| .++++||+||++.|.... +......+..
T Consensus 80 ~------~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~ 153 (212)
T cd07987 80 E------NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPV 153 (212)
T ss_pred H------HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCCCc
Confidence 4 467788899 9999999999732 2388999995 668999999999995433 2211100000
Q ss_pred cCCccccccCCC-CeEEEEEeccccCccccC---CCCCHHHHHHHHHHHHHHHc
Q 042288 428 GMDPFYFFMNPS-PAYEVTFLNKLPYELTCS---AGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 428 ~~~~~~~~~~p~-~~v~V~~l~pi~~~~~~~---~~~~~~~la~~v~~~ia~~l 477 (515)
.....|.+..|. ..++|.|++||....... +.++.+++.+++++.|++.+
T Consensus 154 ~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 154 GKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred eeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 111122233332 249999999998753210 12344567777777666653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=188.79 Aligned_cols=124 Identities=15% Similarity=0.075 Sum_probs=99.2
Q ss_pred hHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEec----ccchhhhhhcCCeeEEe
Q 042288 287 FWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTYS----LSRLSELISPIKTVRLT 359 (515)
Q Consensus 287 ~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~g~~~~~~~~i~id 359 (515)
.++.|++++|+|.|+++ .++++|+||||||++|++++.+++++. +.+++|+ +|++|+.+..+|.++++
T Consensus 68 ~~~~g~k~~V~G~e~l~-----~~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~ifi~ 142 (301)
T PRK14014 68 RLLPRTQWDVEGLEGLS-----KKGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDFPFMK 142 (301)
T ss_pred HHhCCcEEEEEcCCCCC-----CCCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCCeEEe
Confidence 34789999999999997 678999999999999999999888653 4688987 79999999999999999
Q ss_pred cCChhh-----------H---HHHHHHHHc-C-CeEEecCCeeeCC----------Cccccccch-h---hcc----CCc
Q 042288 360 RDRATD-----------A---SMIEKLLEK-G-DLVICPEGTTCRE----------PFLLRFSAL-F---AEL----TDE 405 (515)
Q Consensus 360 R~~~~~-----------~---~~~~~~l~~-G-~l~IFPEGTrs~~----------~~l~~Fk~G-f---~~~----~~p 405 (515)
|++++. . +++.+.+++ | +++|||||||+.. +.+++||+| | .++ -.+
T Consensus 143 R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~ 222 (301)
T PRK14014 143 RYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDG 222 (301)
T ss_pred ccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCE
Confidence 976422 2 223333444 5 8999999999633 378999999 5 233 269
Q ss_pred EEEEEEEcCc
Q 042288 406 VVPVAMSNRM 415 (515)
Q Consensus 406 VvPV~i~~~~ 415 (515)
|+||+|.|..
T Consensus 223 I~dvti~y~~ 232 (301)
T PRK14014 223 LLDVTIVYPD 232 (301)
T ss_pred EEEEEEEeCC
Confidence 9999999954
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-21 Score=183.50 Aligned_cols=175 Identities=14% Similarity=0.110 Sum_probs=125.7
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHH-HHHHHHHcCCCHHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIR-VLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~~G~~~~~l~~~~~ 106 (515)
|++|+||+||||+++ .|..++. +.+. . ... ..........+. .+ +....-..|++.++++++.+
T Consensus 1 ~~la~FDlD~TLi~~--~w~~~~~---~~g~-~-~~~-------~~~~~~~~~~~~-~~~r~~ll~~~g~~~~~i~~~~~ 65 (203)
T TIGR02137 1 MEIACLDLEGVLVPE--IWIAFAE---KTGI-D-ALK-------ATTRDIPDYDVL-MKQRLRILDEHGLKLGDIQEVIA 65 (203)
T ss_pred CeEEEEeCCcccHHH--HHHHHHH---HcCC-c-HHH-------HHhcCCcCHHHH-HHHHHHHHHHCCCCHHHHHHHHH
Confidence 689999999999985 3554432 1121 1 110 000111111221 22 22111235999999987655
Q ss_pred HHhchhhcCCCcHH---HHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeC-ceeeeEEecCCccccccH
Q 042288 107 AVLPKFYSGDLHPE---TWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 107 ~~~~~~~~~~~~~~---~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~-G~~tG~i~~~~~~~g~~K 182 (515)
.. .++|. .++.|+++|.++|||++++.++++++++ +|+++++|+++++++ |.+||... + .+++|
T Consensus 66 ~i-------~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~---~-~~~~K 133 (203)
T TIGR02137 66 TL-------KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQL---R-QKDPK 133 (203)
T ss_pred hC-------CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeee---c-CcchH
Confidence 42 13444 4556677777788999999999999998 999999999999988 99999764 3 57789
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
...++++... ...+++||||.||+||++.|+.++++++++.+++.|.
T Consensus 134 ~~~l~~l~~~--~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~ 180 (203)
T TIGR02137 134 RQSVIAFKSL--YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 180 (203)
T ss_pred HHHHHHHHhh--CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCC
Confidence 9999888433 3468999999999999999999999999999998876
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=164.43 Aligned_cols=117 Identities=24% Similarity=0.399 Sum_probs=103.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh-
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD- 365 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~- 365 (515)
|++++++|.+++| +++|+|+++||+|++|.+++...+++++.++++. .|++++++...|+++|+|++..+
T Consensus 1 ~~~~~v~g~~~lp-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~ 75 (130)
T TIGR00530 1 GLKVEVVGPENLP-----AKSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAI 75 (130)
T ss_pred CcEEEEECcccCC-----CCCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHH
Confidence 6899999999998 6789999999999999999988887778888886 68899999999999999987433
Q ss_pred ---HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEE
Q 042288 366 ---ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMS 412 (515)
Q Consensus 366 ---~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~ 412 (515)
++.+.+.+++| +++|||||+++.++.+.+|++|+ .++++||+||.++
T Consensus 76 ~~~~~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~~ 130 (130)
T TIGR00530 76 ATALKAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVLS 130 (130)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEeC
Confidence 56778889999 99999999999889999999994 5679999999874
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-20 Score=173.47 Aligned_cols=171 Identities=11% Similarity=0.098 Sum_probs=124.1
Q ss_pred CCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec-----------ccchhhhhhcCCeeEEecCC-----
Q 042288 299 TPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS-----------LSRLSELISPIKTVRLTRDR----- 362 (515)
Q Consensus 299 ~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~-----------~~~~g~~~~~~~~i~idR~~----- 362 (515)
.|++| .++++|++|||+|++|++++..+++++..+++++ .|++++++...|.++|+|++
T Consensus 15 ~e~ip-----~~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~ 89 (235)
T cd07985 15 EEQLA-----QGHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDP 89 (235)
T ss_pred HHhcc-----CCCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccc
Confidence 47787 6789999999999999999999998776666665 36678888899999999976
Q ss_pred -----------hhhHHHHHHHHHcC-C-eEEecCCeeeCCCccccccch-h------------hccCCc--EEEEEEEcC
Q 042288 363 -----------ATDASMIEKLLEKG-D-LVICPEGTTCREPFLLRFSAL-F------------AELTDE--VVPVAMSNR 414 (515)
Q Consensus 363 -----------~~~~~~~~~~l~~G-~-l~IFPEGTrs~~~~l~~Fk~G-f------------~~~~~p--VvPV~i~~~ 414 (515)
.++++.+.+.|++| . ++|||||||++.+...+.++| | ..+++| |+|++|.++
T Consensus 90 P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~~y 169 (235)
T cd07985 90 PELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALLTY 169 (235)
T ss_pred hhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEEee
Confidence 12367788889998 5 789999999964444555554 2 457899 999999988
Q ss_pred ccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccC----CCCCHHHHHHHHHHHHHHHcC
Q 042288 415 MSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCS----AGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~----~~~~~~~la~~v~~~ia~~l~ 478 (515)
+.++.+.+.-- ...+. ...++. .+.|.+++||+.++... +.+..+++++.+.+.|.+.++
T Consensus 170 di~Ppp~~v~~-~ige~--r~~~f~-~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 170 DIMPPPKQVEK-EIGEK--RAVAFT-GVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred cccCCCccccc-ccccc--cccccc-ceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 77776552100 00000 012223 49999999998875411 124466799999888887654
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=166.59 Aligned_cols=162 Identities=26% Similarity=0.376 Sum_probs=129.3
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc----CCCccEEEecccc-hhhhhhcCCeeEEecCCh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL----GRPIPAVTYSLSR-LSELISPIKTVRLTRDRA 363 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~----~~~~~~v~k~~~~-~g~~~~~~~~i~idR~~~ 363 (515)
+.+++++++|.+++| .++|+|+++||+|++|.+++...+ .+++.+++++... ..++++..|.++++|.+.
T Consensus 9 ~~~~~~~~~g~~~~p-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~i~r~~~ 83 (187)
T cd06551 9 FGFVRLEVKGPPPPP-----GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFTRLGAFSVDRDSP 83 (187)
T ss_pred cceEEEEEeccccCC-----CCCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHhhcCeEEecCCCh
Confidence 368999999999998 678999999999999999998876 3567778876332 566777779999999764
Q ss_pred ----hhHHHHHHHHHc-C-CeEEecCCeeeCCC-ccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 364 ----TDASMIEKLLEK-G-DLVICPEGTTCREP-FLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 364 ----~~~~~~~~~l~~-G-~l~IFPEGTrs~~~-~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
..++.+.+.+++ | .++||||||++... .+.+|++|+ .+.++||+||++.+....+
T Consensus 84 ~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~-------------- 149 (187)
T cd06551 84 RSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF-------------- 149 (187)
T ss_pred hhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc--------------
Confidence 337888899999 8 89999999999776 889999995 4568999999999864321
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
.+...++|.+++||..++ ..+.+++++.+.+.|.+.+
T Consensus 150 ----~~~~~~~i~~~~pi~~~~----~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 ----EQFPEIFVRIGPPIPYAE----TALGEELAAELANRLTRLL 186 (187)
T ss_pred ----CCCCcEEEEECCCccccc----cccHHHHHHHHHHHHHHhc
Confidence 122349999999999873 4556778888877777654
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-19 Score=180.22 Aligned_cols=188 Identities=19% Similarity=0.223 Sum_probs=137.1
Q ss_pred CCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 25 GREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
.+..++++|||||||+..++ +..+... .+.+.....+. ..+..+.+...+ .+++. ...++|.+++.++++
T Consensus 107 ~~~~~LvvfDmDGTLI~~e~-i~eia~~-~g~~~~v~~it------~~~m~Geldf~e-sl~~r-v~~l~g~~~~il~~v 176 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIEC-IDEIAKL-AGTGEEVAEVT------ERAMRGELDFEA-SLRQR-VATLKGADANILQQV 176 (322)
T ss_pred ccCCCEEEEECCCCCcchHH-HHHHHHH-hCCchHHHHHH------HHHHcCCcCHHH-HHHHH-HHHhCCCCHHHHHHH
Confidence 35689999999999998655 4444332 22122222211 111112222222 13332 346789887777665
Q ss_pred HHHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccc
Q 042288 105 ARAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++. + ++|. .++.++++| +++|+|+++..+++++.++ +|+++++++.+++.+|++||.+.+..+ .++
T Consensus 177 ~~~l-~------l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv-~~k 247 (322)
T PRK11133 177 RENL-P------LMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIV-DAQ 247 (322)
T ss_pred HHhC-C------CChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccC-Ccc
Confidence 4331 1 3444 456778899 6788999999999999998 999999999999999999999998755 788
Q ss_pred cHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 181 NKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.|.+.+++++...+. ..++++|||.||++|++.||.++++|+++++++.|.
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad 300 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQ 300 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 999999988765432 358999999999999999999999999999999887
|
|
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.4e-20 Score=201.70 Aligned_cols=183 Identities=16% Similarity=0.106 Sum_probs=123.7
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec---ccchhhhhhcCCeeEEecCCh
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS---LSRLSELISPIKTVRLTRDRA 363 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~---~~~~g~~~~~~~~i~idR~~~ 363 (515)
++.+.+.+.+++.... .++|+|+|+||+|++|++++..++.+ +..++++. .|++|++++..|++||+|+..
T Consensus 249 ~v~v~~~~~~~lr~~~--~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L~~~~lG~llr~~Ga~fIrR~~~ 326 (783)
T PRK03355 249 EIDYDEYELAALRALL--EEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINLSFGPMGPIMRRSGMIFIRRNIG 326 (783)
T ss_pred cceeCHHHHHHHHhcc--CCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHhccHHHHHHHHHcCcEEecCCCC
Confidence 6677777655543100 46799999999999999999887753 34555665 678999999999999999763
Q ss_pred h--h----HHHHHHH-HHcC-CeEEecCCeeeCCCccccccchh-----------hccCCcEEEEEEEcCccCccCccc-
Q 042288 364 T--D----ASMIEKL-LEKG-DLVICPEGTTCREPFLLRFSALF-----------AELTDEVVPVAMSNRMSMFHGTTA- 423 (515)
Q Consensus 364 ~--~----~~~~~~~-l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-----------~~~~~pVvPV~i~~~~~~~~~~~~- 423 (515)
. . ++...+. +++| ++.+|||||||+++.+++||.|. ...++|||||+|.|.+.+-.+...
T Consensus 327 ~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~~~y~~ 406 (783)
T PRK03355 327 DDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEIGEYAA 406 (783)
T ss_pred chHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecccccchhHHH
Confidence 2 2 3333444 4578 99999999999999999999993 136899999999986544322211
Q ss_pred --CC-CccCCcccccc--------CCCCeEEEEEeccccCccccCCC---------CC---HHHHHHHHHHHHHH
Q 042288 424 --RG-WKGMDPFYFFM--------NPSPAYEVTFLNKLPYELTCSAG---------KS---SHDVANYIQRLIAT 475 (515)
Q Consensus 424 --~~-~~~~~~~~~~~--------~p~~~v~V~~l~pi~~~~~~~~~---------~~---~~~la~~v~~~ia~ 475 (515)
.| -+..+.+++++ .....+.|+|++||+.+++.... .+ .+.++.+|...|.+
T Consensus 407 e~~G~~k~~esl~~~~~~~~~l~~~~~G~i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~ 481 (783)
T PRK03355 407 EARGGEKTPEGLRWLYNYIKAQGERNYGKIYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQ 481 (783)
T ss_pred HhcCCCcccccHHHHHHHHHHhccCCceeEEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHh
Confidence 12 12222222111 22234999999999988753211 01 23466666666655
|
|
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=170.18 Aligned_cols=172 Identities=14% Similarity=0.187 Sum_probs=123.8
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec---ccchhhhhhcCCeeEEecCCh-
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS---LSRLSELISPIKTVRLTRDRA- 363 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~---~~~~g~~~~~~~~i~idR~~~- 363 (515)
+.++.+++++|.|+++..- ..++|+|+++||+|.+|++++... +.++.+++++ .+++++++...|.++|+|++.
T Consensus 4 ~~~~~~~~v~g~e~l~~~~-~~~~~~I~~~~H~s~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~~i~r~~~~ 81 (189)
T cd07983 4 LYLTLRWRVIGDESADALI-AQGEPVILAFWHGRLLLMPYLFRR-RKRIAALISRSKDGEIIARVLERLGIRVVRGSSSR 81 (189)
T ss_pred eeEeEeEEEeCchhhhhhc-cCCCCEEEEEeCchHHHhHHHhcc-CCCeEEEEecCcCHHHHHHHHHHhCCCEEEcCCCC
Confidence 3578899999999986100 025799999999999999998765 5677778776 577888899999999998643
Q ss_pred ---hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccc
Q 042288 364 ---TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFF 435 (515)
Q Consensus 364 ---~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 435 (515)
+.++.+.+.|++| +++|||||||+. ..+|++|+ .++++||+||++.+...+..+. |.. +.+
T Consensus 82 ~~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~~~----~~~----~~~ 150 (189)
T cd07983 82 GGAAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRLKS----WDR----FII 150 (189)
T ss_pred cHHHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEeccC----ccc----ccc
Confidence 3377888899999 999999999864 35799993 5689999999998853322211 100 012
Q ss_pred cCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 436 MNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 436 ~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
..+..+++|.|++||++++ ..+ ++..+++.+.+.+.+
T Consensus 151 p~~~~~~~v~~~~pi~~~~----~~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 151 PKPFSRVVIVFGEPIHVPP----DAD-EEELEEYRLELEAAL 187 (189)
T ss_pred CCCCcceEEEEeCCEeeCC----CCC-HHHHHHHHHHHHHHh
Confidence 2342349999999998762 334 555566666665554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.6e-21 Score=168.43 Aligned_cols=115 Identities=30% Similarity=0.427 Sum_probs=64.8
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC----CCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG----RPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
+++|+|.|++| +++|+|++|||+|++|.+++..++. +.+.+++++ .|.+++++...|+++++|++..
T Consensus 1 ~v~v~g~e~l~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~ 75 (132)
T PF01553_consen 1 KVEVEGLENLP-----KGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRK 75 (132)
T ss_dssp -----HHHHHH-----TT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHH
T ss_pred CCccCccccCC-----CCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeeccc
Confidence 57899999998 6789999999999999999998883 235677776 5889999999999999994433
Q ss_pred h----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEE
Q 042288 365 D----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMS 412 (515)
Q Consensus 365 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~ 412 (515)
. ++.+.+.+++| .++||||||+++...+.+|++|+ .++++||+||+|+
T Consensus 76 ~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 76 KNRKALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred ccchhHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 2 67778889998 99999999999998889999994 5569999999985
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-19 Score=188.78 Aligned_cols=173 Identities=21% Similarity=0.220 Sum_probs=123.6
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARA 107 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 107 (515)
....+||+||||+++|+.++++....+ +.+...+. .|..... ....+|+.+.. ..+++.+.+.
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~--~~p~~~~~----l~~~~~~-----g~a~lK~~~a~-~~~~d~~~lp----- 72 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLR--RNPLALLR----LPLWLLR-----GKAALKRRLAR-RVDLDVATLP----- 72 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHH--hChHHHHH----HHHHHHh-----cHHHHHHHHHh-hcCCChhhCC-----
Confidence 457899999999999998888765443 23333221 1111111 11224443332 2233332221
Q ss_pred HhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEeceEEEeCceeeeEEecCCccccccH
Q 042288 108 VLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIGTEICVYKGRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 108 ~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vigt~l~~~~G~~tG~i~~~~~~~g~~K 182 (515)
++|++.+ .++++| .++|+|+|++.++++++++ +|+ |.++|++.. .|| ++++|
T Consensus 73 ---------~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGlFd~Vigsd~~------------~~~-kg~~K 129 (479)
T PRK08238 73 ---------YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGLFDGVFASDGT------------TNL-KGAAK 129 (479)
T ss_pred ---------CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCEEEeCCCc------------ccc-CCchH
Confidence 4455554 566899 5577999999999999997 995 999999742 256 88999
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-EccCc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHDGR 244 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~r 244 (515)
++++++++++ .+ ...+|||.+|+|+++.|++|++|||++++++.|+ ++||++. |....
T Consensus 130 ~~~l~~~l~~--~~-~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~-~~~~~~~~~~~~~ 188 (479)
T PRK08238 130 AAALVEAFGE--RG-FDYAGNSAADLPVWAAARRAIVVGASPGVARAAR-ALGPVERVFPPRP 188 (479)
T ss_pred HHHHHHHhCc--cC-eeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHH-HcCCcceecCCCc
Confidence 9999999875 23 3457999999999999999999999999999999 9999997 75433
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=161.98 Aligned_cols=171 Identities=20% Similarity=0.184 Sum_probs=115.6
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHh
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVL 109 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~ 109 (515)
+++|||||||+..+|.+.++..+. +.......+. ..+..+.+...+. ++ .....+++...+++. ++++
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~-~~~~~~~~~~------~~~~~g~i~~~~~-~~-~~~~~~~~~~~~~~~---~~~~ 68 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLL-GTNDEVIELT------RLAPSGRISFEDA-LG-RRLALLHRSRSEEVA---KEFL 68 (177)
T ss_pred CEEecCccccccchhhHHHHHHHh-CChHHHHHHH------HHHHCCCCCHHHH-HH-HHHHHhCCCCHHHHH---HHHH
Confidence 489999999999998776665432 2111111111 1222222222221 22 234567888765444 3344
Q ss_pred chhhcC-CCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEEec-CCccccccHHHH
Q 042288 110 PKFYSG-DLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFVKS-PGVLVGKNKAGA 185 (515)
Q Consensus 110 ~~~~~~-~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i~~-~~~~~g~~K~~~ 185 (515)
.+.+.. .-..+.++.++++| .++|+|+|++.+++++++. +|+++++++++.++ ||.+||+..+ +++ .+.+|.+.
T Consensus 69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~K~~~ 146 (177)
T TIGR01488 69 ARQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNP-EGECKGKV 146 (177)
T ss_pred HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccC-CcchHHHH
Confidence 333221 12234555677899 5678999999999999998 99999999999995 8999998766 455 89999999
Q ss_pred HHHHhcCCCC--CceEEEeCCcCcHHHHhcc
Q 042288 186 LMKMLGDDEE--MPDIGLGDRKTDSLFLNLC 214 (515)
Q Consensus 186 l~~~~~~~~~--~~~~aygDS~~DlpmL~~a 214 (515)
++++..+.+. ..+++||||.+|+||++.|
T Consensus 147 l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 147 LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9998765322 3478999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-18 Score=191.03 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=110.9
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEe-c---ccchhhhhhcCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTY-S---LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k-~---~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
.++|.|.|+++... ..+.|+|+|+||+|++|++++..++.+. ...++. . .|++|++++..|++||+|+....
T Consensus 275 ~v~V~g~E~l~~~~-~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~~p~~g~llr~~GaffIrR~~~~~ 353 (799)
T TIGR03703 275 GINVNNADRVRKLA-QKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 353 (799)
T ss_pred ceEEechhhccccc-CCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhccHHHHHHHHHCCceEeecCCCcc
Confidence 46678999997200 0134999999999999999998776432 233433 3 68899999999999999976432
Q ss_pred ------H-HHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hc-------cCCcEEEEEEEcCccCccCcc---c
Q 042288 366 ------A-SMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AE-------LTDEVVPVAMSNRMSMFHGTT---A 423 (515)
Q Consensus 366 ------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~-------~~~pVvPV~i~~~~~~~~~~~---~ 423 (515)
+ +.+.+.+++| ++.||||||||++|.+++||.|+ .+ .+++||||+|.|...+..... .
T Consensus 354 ~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv~E~~~y~~El 433 (799)
T TIGR03703 354 KLYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHVMEVATYLKEL 433 (799)
T ss_pred hhHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccccchhHHHHHh
Confidence 2 2345667889 99999999999999999999993 22 269999999988643321110 0
Q ss_pred CCC-ccCCcc-------ccccCCCCeEEEEEeccccCccc
Q 042288 424 RGW-KGMDPF-------YFFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 424 ~~~-~~~~~~-------~~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.|. +..+.+ ..+.+.|. +.|.|++||+..++
T Consensus 434 ~G~~K~kEsl~~~l~~~~~l~~~G~-i~V~FGePIsl~~~ 472 (799)
T TIGR03703 434 RGKRKEKESVFGVLKTLRKLRNFGQ-GYVNFGEPINLNDY 472 (799)
T ss_pred cCCCccccCHHHHHHHHhccCCCce-EEEEeCCCccHHHH
Confidence 111 111111 11233455 99999999987654
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-18 Score=191.00 Aligned_cols=161 Identities=17% Similarity=0.200 Sum_probs=112.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEec----ccchhhhhhcCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTYS----LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
.++|.|.|+++... ..+.|+|+|+||+|++|++++..++.+. +.++++. .|++|++++..|++||+|+....
T Consensus 285 ~i~V~g~e~L~~~~-~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~ 363 (818)
T PRK04974 285 GINVHNAERVRQLA-QDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 363 (818)
T ss_pred ceEEcchhhhhhcc-cCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhcchHHHHHHHHCCceEeeCCCCch
Confidence 46688999997100 0234899999999999999998776543 4566665 68899999999999999986432
Q ss_pred -H-----H-HHHHHHHcC-CeEEecCCeeeCCCccccccch-h---hc-------cCCcEEEEEEEcCccCccCcc---c
Q 042288 366 -A-----S-MIEKLLEKG-DLVICPEGTTCREPFLLRFSAL-F---AE-------LTDEVVPVAMSNRMSMFHGTT---A 423 (515)
Q Consensus 366 -~-----~-~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G-f---~~-------~~~pVvPV~i~~~~~~~~~~~---~ 423 (515)
+ . .+.+.+++| ++.||||||||++|.+++||.| + .+ ..++||||+|.|...+..+.. .
T Consensus 364 ~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv~E~~~y~~el 443 (818)
T PRK04974 364 KLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHVMEVGTYAKEL 443 (818)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccchhhhHHHHHHh
Confidence 1 2 234567889 9999999999999999999999 3 22 247999999988543221110 0
Q ss_pred CCC-ccCCcccc-------ccCCCCeEEEEEeccccCccc
Q 042288 424 RGW-KGMDPFYF-------FMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 424 ~~~-~~~~~~~~-------~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.|. +..+.+|. ..+.|. +.|.|++||+..++
T Consensus 444 ~G~~K~kEsl~~il~~i~~~~~~G~-v~V~FGePisl~~~ 482 (818)
T PRK04974 444 RGAPKEKESLFQVLRGIRKLRNFGQ-GYVNFGEPIPLNDY 482 (818)
T ss_pred cCCCCcCcCHHHHHHHHhhcCCCce-EEEEeCCCccHHHH
Confidence 111 11122221 113355 99999999976553
|
|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=158.68 Aligned_cols=149 Identities=29% Similarity=0.391 Sum_probs=121.1
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCCh-
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRA- 363 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~- 363 (515)
.++.+++++|.++++ .++|+|+++||.|++|.+++......+..++++. .+++++++...|.++++|...
T Consensus 7 ~~~~~v~v~~~~~~~-----~~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 81 (184)
T cd07989 7 LLGVRVRVEGLENLP-----PKGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGR 81 (184)
T ss_pred eeceEEEEEccccCC-----CCCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEecCCch
Confidence 368899999999987 5789999999999999988877665567778775 488899999999999998763
Q ss_pred ---hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccc
Q 042288 364 ---TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFF 435 (515)
Q Consensus 364 ---~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 435 (515)
..++++.+.+++| .+++||||+++.++...+|+.|+ .+.++||+||.+.+....+... ..
T Consensus 82 ~~~~~~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~~------------~~ 149 (184)
T cd07989 82 SAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPKG------------KK 149 (184)
T ss_pred hHHHHHHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcCC------------CC
Confidence 3477888899999 89999999999888899999994 4579999999999954322111 23
Q ss_pred cCCCCeEEEEEeccccCcc
Q 042288 436 MNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 436 ~~p~~~v~V~~l~pi~~~~ 454 (515)
..+...++|++++||.+++
T Consensus 150 ~~~~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 150 LPRPGRVTVRIGEPIPPEG 168 (184)
T ss_pred cCCCCcEEEEEcCCcChhh
Confidence 3455569999999999875
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.4e-17 Score=155.02 Aligned_cols=189 Identities=19% Similarity=0.249 Sum_probs=127.9
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
..++++|||||||+++++ +..+... .+.......+ . ..+..+.+.... ..++ ....+.+.+.+.++++.+
T Consensus 13 ~~k~iiFD~DGTL~~~~~-~~~l~~~-~g~~~~~~~~-----~-~~~~~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 82 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAET-IDEIAKI-AGVEEEVSEI-----T-ERAMRGELDFKA-SLRE-RVALLKGLPVELLKEVRE 82 (219)
T ss_pred cCCEEEEeCcccCCCchH-HHHHHHH-hCCHHHHHHH-----H-HHHHcCCCCHHH-HHHH-HHHHhCCCCHHHHHHHHh
Confidence 457999999999999865 3333221 1100011111 0 111111121111 1222 233467877776665544
Q ss_pred HHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHH
Q 042288 107 AVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGA 185 (515)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~ 185 (515)
... +.+ -..+.++.++++| .++|+|++...+++++++. +|+++++++++.+++|.++|.+.++.+ .+..|.+.
T Consensus 83 ~~~---~~~-g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~~ 156 (219)
T TIGR00338 83 NLP---LTE-GAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIV-DASYKGKT 156 (219)
T ss_pred cCC---cCC-CHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCccc-CCcccHHH
Confidence 321 111 1245566777899 6678999999999999998 999999999999999999999888765 56668888
Q ss_pred HHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 186 LMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 186 l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
++.++...+. ..++++|||.+|+++++.|+.++++|+++.++..|.
T Consensus 157 ~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 8876654322 347899999999999999999999999998887765
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=151.86 Aligned_cols=185 Identities=18% Similarity=0.182 Sum_probs=115.9
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCC----CHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGM----KVPSIES 103 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~----~~~~l~~ 103 (515)
.++++|||||||+++++.+.++... .+......... ..+..+.+...+. . ......+.+. ..+++++
T Consensus 4 ~k~viFD~DGTLid~~~~~~~~~~~-~~~~~~~~~~~------~~~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 74 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMSSWEYLHRR-LETCGLAKKNA------ELFFSGRISYEEW-A-RLDASLWKRRSGRLRREEVEE 74 (201)
T ss_pred ceEEEEeCCCCCcCCccHHHHHHHH-hCchHHHHHHH------HHHHcCCCCHHHH-H-HHHHHHHhhcccCCCHHHHHH
Confidence 5789999999999988766555321 22111111110 1121222222221 1 1112334443 4555554
Q ss_pred HHHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEEecCCccc
Q 042288 104 VARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFVKSPGVLV 178 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i~~~~~~~ 178 (515)
..++. .++| +.++.++++| .++|+|++++.+++++++. +|++.++++.+..+ +|..++..... + .
T Consensus 75 ~~~~~-------~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~-~-~ 144 (201)
T TIGR01491 75 IFKEI-------SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVR-V-T 144 (201)
T ss_pred HHHhC-------CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeE-E-c
Confidence 33322 2444 4556777899 5678999999999999998 99999999998775 56666542110 1 1
Q ss_pred cccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
...|.+.++.+....+ ...+++||||.+|+++++.|+.++++||+++++++|+
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 2345555554433211 2347999999999999999999999999999999997
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.7e-17 Score=165.15 Aligned_cols=119 Identities=21% Similarity=0.172 Sum_probs=95.9
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC-----CCccEEEec----ccchhhhhhcCCeeEE
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG-----RPIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~-----~~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
++.|+++++.| |+++ .++++|++|||+|++|.+++.+... ..+.+++|+ +|++||.+...|.|++
T Consensus 75 ~~~gvkv~v~G-e~l~-----~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v 148 (374)
T PLN02510 75 KINKTKVVFSG-DKVP-----PEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIPV 148 (374)
T ss_pred HhcCeEEEEEe-ecCC-----CCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCeee
Confidence 35899999999 7776 4689999999999999999875431 246789987 7999999999999999
Q ss_pred ecCChh---hHHHHHHHHHcC----CeEEecCCeeeCCCccccccchhhccCCcEEEEEEE
Q 042288 359 TRDRAT---DASMIEKLLEKG----DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMS 412 (515)
Q Consensus 359 dR~~~~---~~~~~~~~l~~G----~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~ 412 (515)
+|+... .++++.+.++++ .++|||||||+..+....++..+.+.++||+.-++.
T Consensus 149 ~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 149 ERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred eCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEc
Confidence 998653 366677777764 589999999997776666776677888888877774
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.3e-16 Score=144.50 Aligned_cols=116 Identities=26% Similarity=0.409 Sum_probs=85.5
Q ss_pred HHHcCCCHHHHHHHHHHHhchh-hcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEe
Q 042288 91 ATFAGMKVPSIESVARAVLPKF-YSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVY 163 (515)
Q Consensus 91 ~~~~G~~~~~l~~~~~~~~~~~-~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~ 163 (515)
..+.+++.++++.+.+. ..++ +.+.+.+ +.++.++++| .++|||||++.+++++++. +|++. ++||++ .+
T Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~v~~~~~-~~ 140 (192)
T PF12710_consen 64 ERLRGLSERYLEEIAKD-IEQYKLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDNVIGNEL-FD 140 (192)
T ss_dssp HHHHTHHHHHHHHHHHH-HHHHHHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGGEEEEEE-EC
T ss_pred HHHHHHHHHHHHHHHHh-hcccccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEEEEEee-ee
Confidence 66788888888877765 3221 0111113 3444567889 6678999999999999998 99987 999999 54
Q ss_pred -C-ceeeeEEecCCccccccHHHHHHHH---hc-CCCCCceEEEeCCcCcHHHHh
Q 042288 164 -K-GRSTGFVKSPGVLVGKNKAGALMKM---LG-DDEEMPDIGLGDRKTDSLFLN 212 (515)
Q Consensus 164 -~-G~~tG~i~~~~~~~g~~K~~~l~~~---~~-~~~~~~~~aygDS~~DlpmL~ 212 (515)
+ +..+|++.+.++ | +|+++++++ .. ..+...+++||||.+|+|||+
T Consensus 141 ~~~~~~~~~~~~~~~--~-~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 141 NGGGIFTGRITGSNC--G-GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp TTCCEEEEEEEEEEE--S-HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cccceeeeeECCCCC--C-cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 3 567888887644 5 899999998 22 212456899999999999986
|
|
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-17 Score=152.72 Aligned_cols=102 Identities=25% Similarity=0.177 Sum_probs=82.9
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC-----CccEEEec----ccchhhhhhcCCeeEEe
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-----PIPAVTYS----LSRLSELISPIKTVRLT 359 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~g~~~~~~~~i~id 359 (515)
+.|++++++|.++.+ .++++|++|||+|++|.+++.+++.+ .+.+++|+ +|++|+++...+.++++
T Consensus 7 ~~g~~i~v~G~~~~~-----~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~ 81 (193)
T cd07990 7 LSGVKVVVYGDEPKL-----PKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFLK 81 (193)
T ss_pred ecCeEEEEEecCccC-----CCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEEE
Confidence 479999999999985 46799999999999999999888753 45788886 68899999999999999
Q ss_pred cCChhh---HHHHHHHHHc---C-CeEEecCCeeeCCCccccc
Q 042288 360 RDRATD---ASMIEKLLEK---G-DLVICPEGTTCREPFLLRF 395 (515)
Q Consensus 360 R~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l~~F 395 (515)
|+..++ +++..+.+++ | +++|||||||+..+.+.++
T Consensus 82 R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~ 124 (193)
T cd07990 82 RKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERS 124 (193)
T ss_pred CChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHH
Confidence 986544 4444455554 6 8999999999987766544
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.5e-16 Score=159.21 Aligned_cols=103 Identities=24% Similarity=0.173 Sum_probs=80.6
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC-----CccEEEec----ccchhhhhhcCCeeEE
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-----PIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
+.+|+++++.|.+..... ..++++|++|||+|++|.+++....++ ...+++|+ +|++||.+...|.|++
T Consensus 63 ~~~Gvkv~V~gd~~~~~~--~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~IfI 140 (376)
T PLN02380 63 WWAGVKVQLYADEETFEL--MGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVFL 140 (376)
T ss_pred HcCCeEEEEEecchhhcc--CCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEEe
Confidence 578999999997664200 013579999999999999998776543 25778887 7999999999999999
Q ss_pred ecCChhh---HHHHHHHHHc---C-CeEEecCCeeeCCCcc
Q 042288 359 TRDRATD---ASMIEKLLEK---G-DLVICPEGTTCREPFL 392 (515)
Q Consensus 359 dR~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l 392 (515)
||+...+ ++...+.+++ | .++|||||||...+.+
T Consensus 141 dR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~ 181 (376)
T PLN02380 141 ERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKL 181 (376)
T ss_pred cCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchhh
Confidence 9987655 4555667776 5 7999999999976654
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.2e-16 Score=171.21 Aligned_cols=146 Identities=15% Similarity=0.136 Sum_probs=104.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC----CCccEEEec----ccchhhhhhcCCeeEEecCChhh--H----HH-HHHHHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG----RPIPAVTYS----LSRLSELISPIKTVRLTRDRATD--A----SM-IEKLLE 374 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~--~----~~-~~~~l~ 374 (515)
+.|+|+++||.|++|++++..++. ++..++++. .|++|++++..|++||+|+.+.+ . ++ +.+.++
T Consensus 628 ~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk 707 (1108)
T PTZ00374 628 RVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVL 707 (1108)
T ss_pred CCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 459999999999999999977764 233566665 68999999999999999987642 2 22 245678
Q ss_pred cC-CeEEecCCeeeCCCccccccchh----hcc---------CCcEEEEEEEcCccCccCcc---cCCC-ccCC-ccc--
Q 042288 375 KG-DLVICPEGTTCREPFLLRFSALF----AEL---------TDEVVPVAMSNRMSMFHGTT---ARGW-KGMD-PFY-- 433 (515)
Q Consensus 375 ~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~---------~~pVvPV~i~~~~~~~~~~~---~~~~-~~~~-~~~-- 433 (515)
+| ++.+|||||||+++.++++|.|. .++ +++||||+|.|....-.... ..|- +..+ ..+
T Consensus 708 ~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl~~ll 787 (1108)
T PTZ00374 708 RRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENPGNLL 787 (1108)
T ss_pred CCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCHHHHH
Confidence 89 99999999999999999999993 222 78999999999643211110 0111 1111 111
Q ss_pred ----cccCCCCeEEEEEeccccCccc
Q 042288 434 ----FFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 434 ----~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.+.++.-++.|.|++|++..++
T Consensus 788 k~ir~L~~~~GrV~V~FGEPISLrey 813 (1108)
T PTZ00374 788 RARSLLKRRHGKIHVHIGEPVSLRSF 813 (1108)
T ss_pred HHHHHHhccCceEEEECCCCccHHHH
Confidence 1223334599999999987765
|
|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.3e-16 Score=132.82 Aligned_cols=101 Identities=31% Similarity=0.423 Sum_probs=85.5
Q ss_pred EEEEeCCCCCCcHHHHHHhcCC---CccEEEec----ccchhhhhhcCCeeEEecCChhh----HHHHHHHHHcC-CeEE
Q 042288 313 VLFICSHRTLLDPIFLSTALGR---PIPAVTYS----LSRLSELISPIKTVRLTRDRATD----ASMIEKLLEKG-DLVI 380 (515)
Q Consensus 313 ~IiVaNH~S~lD~~~l~~~~~~---~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~----~~~~~~~l~~G-~l~I 380 (515)
+|++|||+|++|.+++...+++ +..++++. .|++++++...|.++++|..... ++++.+.+++| +++|
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999998865 46777765 68889999999999999977522 55566677788 8999
Q ss_pred ecCCeeeCCCccccccchh----hccCCcEEEEEEEc
Q 042288 381 CPEGTTCREPFLLRFSALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 381 FPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~ 413 (515)
||||++++...+.+|++|+ .+.++||+||++.|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 9999999888899999994 55689999999987
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3e-14 Score=137.02 Aligned_cols=182 Identities=14% Similarity=0.053 Sum_probs=114.6
Q ss_pred EEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHhc
Q 042288 31 VVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLP 110 (515)
Q Consensus 31 avFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~~ 110 (515)
++|||||||+..|+...++..+. +.....+. ..+..+.+ ..++.+...+++++....++ ..+++.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~---~~~~~~~~------~~~~~g~~-----~~~e~~~~~~~~~~~~~~~~-~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFA---PPEWEALK------DGVLSKTL-----SIQEGVGRMFGLLPSSLKEE-ITSFVL 66 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhC---cHHHHHHH------HHHHcCCc-----cHHHHHHHHHhhCCCchHHH-HHHHHH
Confidence 79999999999888443332221 11111111 11111111 13333455566665444332 233332
Q ss_pred hhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcC-CcEEEeceEEEeCceeeeEEec-------CCccc
Q 042288 111 KFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLG-ADMVIGTEICVYKGRSTGFVKS-------PGVLV 178 (515)
Q Consensus 111 ~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lG-id~vigt~l~~~~G~~tG~i~~-------~~~~~ 178 (515)
+. ..++| +++++++++| .++|+|+|++.+++++++. ++ .+.++|+++.+.++.+++.... .+|
T Consensus 67 ~~--~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~c-- 141 (214)
T TIGR03333 67 ET--AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQC-- 141 (214)
T ss_pred hc--CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCC--
Confidence 21 23455 5666778889 6678999999999999997 64 5788999999887777765542 234
Q ss_pred cccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCce
Q 042288 179 GKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPI 238 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i 238 (515)
|..|..+++++... ...++++|||.+|+++++.|+..++-+ .|..+.+ +++=+.
T Consensus 142 g~~K~~~l~~~~~~--~~~~i~iGDg~~D~~~a~~Ad~~~ar~---~l~~~~~-~~~~~~ 195 (214)
T TIGR03333 142 GCCKPSLIRKLSEP--NDYHIVIGDSVTDVEAAKQSDLCFARD---YLLNECE-ELGLNH 195 (214)
T ss_pred CCCHHHHHHHHhhc--CCcEEEEeCCHHHHHHHHhCCeeEehH---HHHHHHH-HcCCCc
Confidence 67799999987654 455788999999999999999865544 2333444 444443
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.8e-14 Score=134.51 Aligned_cols=160 Identities=18% Similarity=0.185 Sum_probs=120.4
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
+++++|.|+++..- ..++|+|+++||+|++|.+...... +.++..+.++ .+.+++++. ..|..+|+|+ ..
T Consensus 3 ~~~i~~~e~l~~~~-~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~g~~~i~~~--~~ 79 (192)
T cd07984 3 RVEREGLEHLEAAL-AKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPLKNPLLDRLITRGRERFGARLIPRG--GG 79 (192)
T ss_pred eeEecCHHHHHHHH-HcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHHHHhcCCeeEcCC--ch
Confidence 56788888875100 0257999999999999998776665 5667778776 566777665 3578889887 46
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCC-cccc-------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREP-FLLR-------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~-~l~~-------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
++.+.+.|++| .++|||||+++..+ ...+ |+.|+ ..+++||+|+.+.+..
T Consensus 80 ~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------------- 142 (192)
T cd07984 80 LRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------------- 142 (192)
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------------
Confidence 77888999999 99999999998654 4444 58883 4579999999997642
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
++. ++|+|++|+++. ...+.+++++++.+.+++.......
T Consensus 143 -----~~~-~~i~~~~~i~~~----~~~~~~~~~~~~~~~lE~~i~~~P~ 182 (192)
T cd07984 143 -----GGG-YRIEFEPPLENP----PSEDVEEDTQRLNDALEAAIREHPE 182 (192)
T ss_pred -----CCC-EEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHhCch
Confidence 123 899999999876 2577889999998888887654443
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.8e-15 Score=157.58 Aligned_cols=186 Identities=15% Similarity=0.092 Sum_probs=122.8
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec---ccchhhhhhcCCeeEEecC
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS---LSRLSELISPIKTVRLTRD 361 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~---~~~~g~~~~~~~~i~idR~ 361 (515)
++.+++...+.+.+... ..+.|.|+++||.|++|.+++..+++. +..+++-. .|.+|.+++..|.+|+-|+
T Consensus 95 ~Y~v~v~~~~~~~lr~~--~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRs 172 (621)
T PRK11915 95 AYDVLVDEDQITQLRKL--DRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQ 172 (621)
T ss_pred HHeEEeCHHHHHHHHHh--ccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccC
Confidence 34555665665554210 046799999999999999999876532 12233322 6778999999999999887
Q ss_pred Chhh------H-HHHHHHHHcC-CeEEecCCeeeCCCccccccchh-h----------ccCCcEEEEEEEcCccCccCcc
Q 042288 362 RATD------A-SMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF-A----------ELTDEVVPVAMSNRMSMFHGTT 422 (515)
Q Consensus 362 ~~~~------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-~----------~~~~pVvPV~i~~~~~~~~~~~ 422 (515)
.... + +-+...+++| ++.+|||||||++|.+++=|-|. . ..+++||||+|.|.+.+-....
T Consensus 173 f~~~~LY~~vl~eYi~~ll~~G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y 252 (621)
T PRK11915 173 TKDIPVYRFVLRAYAAQLVQNHVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAM 252 (621)
T ss_pred CCCchHHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHH
Confidence 6543 2 4456678889 99999999999999999988883 1 3578999999999754322110
Q ss_pred ---c-CCCccCCcc-c------cccCCCCeEEEEEeccccCccccCC--------CCCHHHHHHHHHHHHHHH
Q 042288 423 ---A-RGWKGMDPF-Y------FFMNPSPAYEVTFLNKLPYELTCSA--------GKSSHDVANYIQRLIATS 476 (515)
Q Consensus 423 ---~-~~~~~~~~~-~------~~~~p~~~v~V~~l~pi~~~~~~~~--------~~~~~~la~~v~~~ia~~ 476 (515)
. ++-+-.+.+ | .+.++.-.+.|.|++|++..++..+ +...+.++.+|...|.+.
T Consensus 253 ~~El~G~~K~~Esl~~l~~~~~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~ 325 (621)
T PRK11915 253 TTEAYGAVKRPEDLRFLVRLARQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRA 325 (621)
T ss_pred HHHhcCCCCCccHHHHHHHHHHHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhc
Confidence 0 111111111 1 1222334599999999988765211 123456777777666654
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=131.90 Aligned_cols=188 Identities=14% Similarity=0.076 Sum_probs=115.2
Q ss_pred eEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 042288 29 DTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAV 108 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~ 108 (515)
.+++|||||||++.++.. .+... ..... ...+ ...+..+.+..++. ++.+ ...+.+...+++.+...
T Consensus 4 ~~vifDfDgTi~~~d~~~-~~~~~-~~~~~-~~~i------~~~~~~g~~~~~~~-~~~~-~~~l~~~~~~~~~~~~~-- 70 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-AIMKK-FAPPE-WEEL------KDDILSQELSIQEG-VGQM-FQLLPSNLKEEIIQFLL-- 70 (219)
T ss_pred cEEEEcCCCCCCcchhhH-HHHHH-hCHHH-HHHH------HHHHHhCCcCHHHH-HHHH-HHhCCCCchHHHHHHHH--
Confidence 489999999999988754 22111 11001 1111 01111122222221 3222 23344433344443222
Q ss_pred hchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCcc-----
Q 042288 109 LPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVL----- 177 (515)
Q Consensus 109 ~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~----- 177 (515)
.+ -.++| +.+++++++| .++|||+++..+++++.+. + + +.++|++..+.++.++.....+ |.
T Consensus 71 -~~---~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p-~~~~~~~ 143 (219)
T PRK09552 71 -ET---AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHP-CDEHCQN 143 (219)
T ss_pred -hC---CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCC-ccccccc
Confidence 11 12444 5666778899 6678999999999999998 6 5 4688998887666555433322 10
Q ss_pred -ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-Ecc
Q 042288 178 -VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHD 242 (515)
Q Consensus 178 -~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~ 242 (515)
.|..|.+.++++... ...++++|||.+|+++.+.|+..++. ..|...++ +++|+.+ |++
T Consensus 144 ~~~~~K~~~l~~~~~~--~~~~i~iGDs~~Di~aa~~Ag~~~a~---~~l~~~~~-~~~~~~~~~~~ 204 (219)
T PRK09552 144 HCGCCKPSLIRKLSDT--NDFHIVIGDSITDLEAAKQADKVFAR---DFLITKCE-ELGIPYTPFET 204 (219)
T ss_pred cCCCchHHHHHHhccC--CCCEEEEeCCHHHHHHHHHCCcceeH---HHHHHHHH-HcCCCccccCC
Confidence 145699988886544 45689999999999999999997662 25556777 8999976 654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.3e-13 Score=128.48 Aligned_cols=176 Identities=17% Similarity=0.155 Sum_probs=109.2
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
.+++++|||||||++.++ +...... .+......... ..+..+.+...+. ++..+ ..+. .+.+++++..+
T Consensus 11 ~~k~viFDfDGTL~~~~~-~~~~~~~-~g~~~~~~~~~------~~~~~g~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~ 79 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEG-IDELAEF-CGAGEAVAEWT------AKAMGGSVPFEEA-LAARL-SLFK-PSLSQVEEFLE 79 (224)
T ss_pred cCCEEEEeCCCcccchHH-HHHHHHH-cCChHHHHHHH------HHHHCCCCCHHHH-HHHHH-HHcC-CCHHHHHHHHH
Confidence 468999999999999766 3333211 11111111110 1121222322221 22222 2232 24455544333
Q ss_pred HHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEe-CceeeeEEecC-Cccc
Q 042288 107 AVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVY-KGRSTGFVKSP-GVLV 178 (515)
Q Consensus 107 ~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~-~G~~tG~i~~~-~~~~ 178 (515)
+. ...++|. .+++++++| ..+|+|++++.+++++++. +|++ +++++.+.+. +|.++|..... .| .
T Consensus 80 ~~-----~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~ 152 (224)
T PLN02954 80 KR-----PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTS-R 152 (224)
T ss_pred Hc-----cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCccc-C
Confidence 31 2235555 445677899 5678999999999999998 9996 6999998885 78888865432 24 5
Q ss_pred cccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 179 GKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+..|.+.++.+....+...++++|||.+|+.+.+.++..+.+
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~ 194 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFI 194 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEE
Confidence 677998888876653334588899999999997776666555
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-13 Score=123.06 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=116.3
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcc-cCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYY-YVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
++..+++||+|-|+++ +.....+..++ +..+-.... ...++.. +..++ ++++. ..+++|..++-.+
T Consensus 14 ~~~~aVcFDvDSTvi~-eEgIdelA~~~-G~~~~Va~~-------T~rAMng~~~F~e-aL~~R-l~llqp~~~qv~~-- 80 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ-EEGIDELAAYC-GVGEAVAEV-------TRRAMNGEADFQE-ALAAR-LSLLQPLQVQVEQ-- 80 (227)
T ss_pred HhcCeEEEecCcchhH-HhhHHHHHHHh-CchHHHHHH-------HHHHhCCCCcHHH-HHHHH-HHHhcccHHHHHH--
Confidence 4578999999999999 45577776543 212212221 3333442 23233 24433 3477886544333
Q ss_pred HHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEe-Cceeee-EEecCCc
Q 042288 105 ARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVY-KGRSTG-FVKSPGV 176 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~-~G~~tG-~i~~~~~ 176 (515)
+..+. ++.+.| +....|+++| +++++||++..+++|++.+ ||++. ++++.++++ +|+++| ...+|-.
T Consensus 81 ---~v~~~-k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pts 155 (227)
T KOG1615|consen 81 ---FVIKQ-KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTS 155 (227)
T ss_pred ---HHhcC-CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccc
Confidence 33221 233444 4555788999 7889999999999999998 99987 999999996 899988 6777654
Q ss_pred cccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhc
Q 042288 177 LVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNL 213 (515)
Q Consensus 177 ~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~ 213 (515)
.+.+|.+.|+...+..+...+..+||+.+|+++..-
T Consensus 156 -dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 156 -DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred -cCCccHHHHHHHHhCCChheeEEecCCccccccCCc
Confidence 788999999987664322346889999999998876
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.5e-12 Score=118.81 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=89.5
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEE
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFV 171 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i 171 (515)
-.|++.++++++.+..-. .+.+ .+.++.++++..++|+|+++..+++++.++ +|++.++++.+.+. +|.++|..
T Consensus 52 ~~~~~~~~i~~~~~~~~~---~pg~-~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~ 126 (205)
T PRK13582 52 EHGLGLADIQEVIATLDP---LPGA-VEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD 126 (205)
T ss_pred HcCCCHHHHHHHHHhCCC---CCCH-HHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc
Confidence 347888888765554321 1111 345556666645577999999999999998 99998999988885 67777754
Q ss_pred ecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 172 KSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 172 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
. . .++.|...++++-.. ...++++|||.+|+++.+.++.++.++++..+
T Consensus 127 ~---~-~p~~k~~~l~~~~~~--~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~ 175 (205)
T PRK13582 127 L---R-QPDGKRQAVKALKSL--GYRVIAAGDSYNDTTMLGEADAGILFRPPANV 175 (205)
T ss_pred c---c-ccchHHHHHHHHHHh--CCeEEEEeCCHHHHHHHHhCCCCEEECCCHHH
Confidence 2 1 345687777765433 35688999999999999999999998886543
|
|
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-11 Score=115.40 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEe-------------cccchhhhhhcCCeeEEecCCh---hhHHHHHHH
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTY-------------SLSRLSELISPIKTVRLTRDRA---TDASMIEKL 372 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k-------------~~~~~g~~~~~~~~i~idR~~~---~~~~~~~~~ 372 (515)
++.|.|-||||+|.+|-+.+.++++.+..+-.+ ..++...+++...|+++.|+.. +.++.+.+.
T Consensus 67 ~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFslGkclPi~RG~GvYQ~gmd~~i~k 146 (286)
T KOG2847|consen 67 PNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFSLGKCLPIVRGEGVYQKGMDFAIEK 146 (286)
T ss_pred CCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHhcCceEeeeccCccccccHHHHHHh
Confidence 578999999999999988877776533222111 1477788888889999999765 348888999
Q ss_pred HHcC-CeEEecCCeee-CCCccccccchh--hccCCcE----EEEEEEc-CccCccCcccCCCccCCccccccCCCCeEE
Q 042288 373 LEKG-DLVICPEGTTC-REPFLLRFSALF--AELTDEV----VPVAMSN-RMSMFHGTTARGWKGMDPFYFFMNPSPAYE 443 (515)
Q Consensus 373 l~~G-~l~IFPEGTrs-~~~~l~~Fk~Gf--~~~~~pV----vPV~i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 443 (515)
|..| -+.|||||..+ .+..+++||-|. .-+.+|. +|+.-.+ .+.+|.+-. ...+++.+++
T Consensus 147 Ln~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~~p-----------~vp~~Gk~vt 215 (286)
T KOG2847|consen 147 LNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEAPP-----------YVPRFGKTVT 215 (286)
T ss_pred cCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHhCccCCC-----------ccCCCCCEEE
Confidence 9999 89999999998 778899999995 2333443 4555555 333444310 4567788899
Q ss_pred EEEeccccCccc
Q 042288 444 VTFLNKLPYELT 455 (515)
Q Consensus 444 V~~l~pi~~~~~ 455 (515)
|.+++|++.++.
T Consensus 216 V~IG~P~~~~d~ 227 (286)
T KOG2847|consen 216 VTIGDPINFDDV 227 (286)
T ss_pred EEeCCCcchhHH
Confidence 999999987643
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.9e-10 Score=104.76 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=84.1
Q ss_pred cCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Ccee
Q 042288 94 AGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRS 167 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~ 167 (515)
.+.+.+++.+..++. + +.+. ..+.++.++++| ..+|+|++....++++.+. +|+ +.+++++..++ +|++
T Consensus 57 ~~~~~~~~~~~~~~~-~--l~~g-~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~ 131 (188)
T TIGR01489 57 SGLKEDEILEVLKSA-P--IDPG-FKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRH 131 (188)
T ss_pred cCCCHHHHHHHHHhC-C--CCcc-HHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcE
Confidence 466777777655441 1 1111 234555677888 6678999999999999997 885 47899988886 6888
Q ss_pred eeEEec----CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 168 TGFVKS----PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 168 tG~i~~----~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
++.... ..+..|..|.+.++++.... ...++++|||.+|+++.+.|+..++
T Consensus 132 ~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~-~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 132 IVWPHHCHGCCSCPCGCCKGKVIHKLSEPK-YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred EEecCCCCccCcCCCCCCHHHHHHHHHhhc-CceEEEECCCcchhchHhcCCcccc
Confidence 876543 11125667988888876542 2457899999999999998876654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.4e-11 Score=114.14 Aligned_cols=180 Identities=10% Similarity=-0.073 Sum_probs=125.7
Q ss_pred cEEEEeCCCCCCcHHHHHHhcCC--CccEEEecccchhhhhhcCCeeEEecCChhhHHHHHH-----HHHcC---CeEEe
Q 042288 312 GVLFICSHRTLLDPIFLSTALGR--PIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEK-----LLEKG---DLVIC 381 (515)
Q Consensus 312 ~~IiVaNH~S~lD~~~l~~~~~~--~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~-----~l~~G---~l~IF 381 (515)
+.-..+.|.|..|-.++-+.... .+....+++|.++........+++.|....+++...+ .++.| +|++|
T Consensus 8 ~~~~s~p~ss~~d~~~~~s~s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~ 87 (412)
T KOG4666|consen 8 LNSNSNPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLL 87 (412)
T ss_pred ccccCCCCccccccchhhhcccHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeee
Confidence 43444558888886665443210 1122334588899988888899998887766544333 23445 79999
Q ss_pred cCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccCCCccCCccccccCC-CCeEEEEEeccccCccccCCCC
Q 042288 382 PEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP-SPAYEVTFLNKLPYELTCSAGK 460 (515)
Q Consensus 382 PEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~v~V~~l~pi~~~~~~~~~~ 460 (515)
||||++ .+.-|++|.+-.++|+|||.++|....-.-+-|.+..+....|+.++. ...+.+.|.+...|++. ++.
T Consensus 88 ~~~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~e--e~~ 162 (412)
T KOG4666|consen 88 YYLICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD--SDM 162 (412)
T ss_pred eccceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChh--hhc
Confidence 999999 888999999999999999999995432211101111123344544332 34589999988777642 356
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHc-cC
Q 042288 461 SSHDVANYIQRLIATSLSYECTSFTRKDKYRALA-GN 496 (515)
Q Consensus 461 ~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~-~~ 496 (515)
++.-.+..++..|+++++++.|++|.+|...+++ |+
T Consensus 163 d~~~~at~v~~~maealg~~vtd~t~edc~l~vs~gq 199 (412)
T KOG4666|consen 163 DSNPKTTSTEINMAEALGTEVTDRTGEDCSLHVSYGQ 199 (412)
T ss_pred CCcccchhHHHHHHHhhCCCCCCCchHHHHHHHhhcc
Confidence 6778999999999999999999999999999886 54
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=101.14 Aligned_cols=120 Identities=14% Similarity=0.110 Sum_probs=88.5
Q ss_pred HHHHcCC--CHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEE
Q 042288 90 FATFAGM--KVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICV 162 (515)
Q Consensus 90 ~~~~~G~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~ 162 (515)
..++.|. +.++++++.++.--. +.+ -..+.++.++++| .++|+|||+...+++++++ +|++ +++++++.+
T Consensus 98 ~~l~~~~~~~~e~i~~~v~~~~l~-l~p-G~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f 174 (277)
T TIGR01544 98 HGLLVQQAFPKAKIKEIVAESDVM-LKD-GYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDF 174 (277)
T ss_pred HHHHhcCCCCHHHHHHHHhhcCCc-cCc-CHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEE
Confidence 4456665 999999877632111 111 3357777888999 7788999999999999998 8984 899999999
Q ss_pred e-CceeeeEEecCCccccccHHHHHHH----HhcC-CCCCceEEEeCCcCcHHHHhcc
Q 042288 163 Y-KGRSTGFVKSPGVLVGKNKAGALMK----MLGD-DEEMPDIGLGDRKTDSLFLNLC 214 (515)
Q Consensus 163 ~-~G~~tG~i~~~~~~~g~~K~~~l~~----~~~~-~~~~~~~aygDS~~DlpmL~~a 214 (515)
+ ||.+|| ..+|.+ ...+|.+.+.+ .++. .+...+++.|||.+|++|-.-+
T Consensus 175 ~~dGvltG-~~~P~i-~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 175 DEDGVLKG-FKGPLI-HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred CCCCeEeC-CCCCcc-cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 4 899999 466654 67788875543 3331 1124478999999999998766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.7e-08 Score=93.85 Aligned_cols=166 Identities=18% Similarity=0.206 Sum_probs=96.5
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHH-HHHHHHHH-HcCCCHHHHHHHHHH
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAG-IRVLIFAT-FAGMKVPSIESVARA 107 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~~~~~~~~-~~G~~~~~l~~~~~~ 107 (515)
+++||||+||++.||- .++... +....+...+.. .++ ...+.. +.+++..+ -.|.+.+++.+..+.
T Consensus 2 LvvfDFD~TIvd~dsd-~~v~~~-l~~~~~~~~l~~--~~~--------~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ 69 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-DWVIEL-LPPEELPEELRE--SYP--------KGGWTEYMDRVLQLLHEQGVTPEDIRDALRS 69 (234)
T ss_pred EEEEeCCCCccCCccH-HHHHHh-cCCcccHHHHHH--hcc--------ccchHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 7999999999999884 454322 221222122211 010 012222 22222222 348999999886665
Q ss_pred HhchhhcCCCcHHHHHHHH--hCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Cceee-eEEecCCcc-
Q 042288 108 VLPKFYSGDLHPETWRVFS--SCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRST-GFVKSPGVL- 177 (515)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~--~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~t-G~i~~~~~~- 177 (515)
. + +.+.+ .++++.+. +.| .++|+|-|.+++++.+.+. .|+ +.|++++..++ +|+++ .....+.|.
T Consensus 70 i-p--~~pgm-~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 70 I-P--IDPGM-KELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred C-C--CCccH-HHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence 4 3 11111 34444552 357 6678999999999999997 886 46789998886 67765 222222231
Q ss_pred --ccccHHHHHHHHhcCC---C--CCceEEEeCCcCcHHHHh
Q 042288 178 --VGKNKAGALMKMLGDD---E--EMPDIGLGDRKTDSLFLN 212 (515)
Q Consensus 178 --~g~~K~~~l~~~~~~~---~--~~~~~aygDS~~DlpmL~ 212 (515)
.+-=|-..|+++...+ + ....++.||+.||..-..
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 1113666777665541 2 123677899999986544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.1e-08 Score=102.19 Aligned_cols=78 Identities=26% Similarity=0.275 Sum_probs=61.0
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCC-----ccEEEec----ccchhhhhhcCCeeEEecCChhh---HHHHHHHHHcC
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRP-----IPAVTYS----LSRLSELISPIKTVRLTRDRATD---ASMIEKLLEKG 376 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~-----~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~---~~~~~~~l~~G 376 (515)
.+.++|++|||+|..|-+.+.....+. ...+.|+ +|.+||.+...|-||++|+-..+ +.+..+.+++-
T Consensus 69 ~~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~ 148 (346)
T KOG1505|consen 69 GKERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDS 148 (346)
T ss_pred CCCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccC
Confidence 367899999999999999988665432 2345555 79999999999999999986655 55566666653
Q ss_pred ----CeEEecCCee
Q 042288 377 ----DLVICPEGTT 386 (515)
Q Consensus 377 ----~l~IFPEGTr 386 (515)
.+++||||||
T Consensus 149 ~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 149 PDPYWLLLFPEGTR 162 (346)
T ss_pred CCceEEEEecCCCc
Confidence 6999999994
|
|
| >KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.3e-08 Score=102.69 Aligned_cols=207 Identities=15% Similarity=0.108 Sum_probs=130.7
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccch----hhhhhcCCeeE
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRL----SELISPIKTVR 357 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~----g~~~~~~~~i~ 357 (515)
+.+-+.+-.+++..+.++.+ ..+.+-|+||.|.+|.+++... +...+... -+.+ ..+......+.
T Consensus 116 ~llsra~~~~i~~~~~~~~~------~~g~i~v~nh~Sp~d~~vls~~---~~~~~v~q~~~~~v~viq~~~~~~s~~~~ 186 (354)
T KOG2898|consen 116 RLLSRAKSLRISFHDELLLF------PEGGICVANHFSPWDVLVLSVD---NCYALVGQVHGGLVGVIQLALSRASLHFW 186 (354)
T ss_pred hHHHHHhhhhhcccChhhcC------CCCCCceecccCceeEEEeccc---cchheeeecccceEEEeeehhhhhchhhh
Confidence 44445555666677766665 2346899999999999888764 22333332 1221 22233345555
Q ss_pred EecCChhh----HHHHHHHHHcC---CeEEecCCeeeCCCcccccc-chhhccCCcEEEEEEEcCccCccCc-ccCCCcc
Q 042288 358 LTRDRATD----ASMIEKLLEKG---DLVICPEGTTCREPFLLRFS-ALFAELTDEVVPVAMSNRMSMFHGT-TARGWKG 428 (515)
Q Consensus 358 idR~~~~~----~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk-~Gf~~~~~pVvPV~i~~~~~~~~~~-~~~~~~~ 428 (515)
..|....+ .++..++..++ ++++|||||..++..+..|+ +|-++.+..|.|++|+|.......- .......
T Consensus 187 f~~~e~~d~~~~~~~~~e~~~~~~~~~ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~f~~s~~~s~ 266 (354)
T KOG2898|consen 187 FERLEFTDRQVVAKRLAEHVWNERKEPILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDAFWNSPELSF 266 (354)
T ss_pred hhcchhhhhHhhhhhhhHHHhcCCCCcEEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCccccccccCCccccH
Confidence 56655444 24455555554 79999999999999999999 7888999999999999964421110 0000000
Q ss_pred CCccccccC-CCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHccCCCccccchhh
Q 042288 429 MDPFYFFMN-PSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTVVEKPAK 506 (515)
Q Consensus 429 ~~~~~~~~~-p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~~~~~~~~~~~~~ 506 (515)
...++.+.. ......+.+++|+... ++++.-++++++.+.++...+.....+...-| ++.-.++-++++-+
T Consensus 267 ~~~l~~~~ts~~~v~~i~~l~~~~r~----~~et~t~~a~~v~~~ig~~~gl~~~~~dg~lk---~~~~~~~~v~~~~~ 338 (354)
T KOG2898|consen 267 TRYLLELMTSWAIVCDIWYLPPMRRD----NDETATQFANRVKSLIGKSAGLKDLEWDGLLK---RAKKSKKLVSEQLT 338 (354)
T ss_pred HHHHHHHHhhhheeeeeeecccEEee----cccchhHHHHHHHHHHHHhhCCcccCcCCcee---ccCCCCcccccccc
Confidence 001111222 2233678999999887 58999999999999999999888776555544 44444444444433
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.5e-07 Score=85.18 Aligned_cols=170 Identities=17% Similarity=0.168 Sum_probs=98.8
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHc--CCCHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFA--GMKVPSIESVA 105 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--G~~~~~l~~~~ 105 (515)
+.+++-|||||++-.|+ ..++..- .+.+.+ ..+ ....+ +.....+..+.++|. +.+.+|+-+
T Consensus 3 k~vi~sDFDGTITl~Ds-~~~itdt-f~~~e~-k~l-------~~~vl----s~tiS~rd~~g~mf~~i~~s~~Eile-- 66 (220)
T COG4359 3 KPVIFSDFDGTITLNDS-NDYITDT-FGPGEW-KAL-------KDGVL----SKTISFRDGFGRMFGSIHSSLEEILE-- 66 (220)
T ss_pred ceEEEecCCCceEecch-hHHHHhc-cCchHH-HHH-------HHHHh----hCceeHHHHHHHHHHhcCCCHHHHHH--
Confidence 34678899999999877 5555421 111221 111 00111 111123333444443 445555443
Q ss_pred HHHhchhh-cCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceE-----EEe-Cceee--eEEecCC
Q 042288 106 RAVLPKFY-SGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEI-----CVY-KGRST--GFVKSPG 175 (515)
Q Consensus 106 ~~~~~~~~-~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l-----~~~-~G~~t--G~i~~~~ 175 (515)
++.+.+ .+--..+.++|+++++ ..+|||++.++++.|+.+.+.|-+.+-+.++ .+. ||.-. +.-+ +
T Consensus 67 --~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~d--s 142 (220)
T COG4359 67 --FLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDD--S 142 (220)
T ss_pred --HHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCc--c
Confidence 333221 1223467888999988 7788999999999999998555554444444 343 33221 1111 2
Q ss_pred ccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 176 VLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 176 ~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
. +|-.|...++++... .+..+..|||.+|+.--..++.-++-
T Consensus 143 ~-fG~dK~~vI~~l~e~--~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 143 Q-FGHDKSSVIHELSEP--NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred c-cCCCcchhHHHhhcC--CceEEEecCCcccccHhhhhhhHhhH
Confidence 2 788899999988665 33345569999999877766665543
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=90.18 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=64.1
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|.+.+ .++++| ..+|+|++....++++.++ +|+++.+..-+.. ...+ .+..+.+.++.++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~-------~~~~----~~Kp~~~~~~~~~~ 159 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASA-------EKLP----YSKPHPEVYLNCAA 159 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEc-------ccCC----CCCCCHHHHHHHHH
Confidence 35566555 566889 5678999999999999998 9986555432211 1000 12223445555554
Q ss_pred CCCC--CceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 192 DDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 192 ~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
..+. ..++++|||.+|++.-+.||.+.+.-+++
T Consensus 160 ~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 160 KLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred HcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence 4322 33789999999999999999877665544
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.71 E-value=4e-08 Score=85.73 Aligned_cols=95 Identities=24% Similarity=0.266 Sum_probs=56.6
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeC-ceeeeEEecCCccccc---cHHHHHHHHh
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYK-GRSTGFVKSPGVLVGK---NKAGALMKML 190 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~-G~~tG~i~~~~~~~g~---~K~~~l~~~~ 190 (515)
+.++.++++| .++|+|++....++.++++ +|+ +.++++...... +.-.+......+..+. ++.+.+.+.+
T Consensus 31 ~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (139)
T cd01427 31 EALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLL 109 (139)
T ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHc
Confidence 4445667788 5678999999999999998 886 556655533210 0000101100111223 3334444444
Q ss_pred cCCCCCceEEEeCCcCcHHHHhcccc
Q 042288 191 GDDEEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 191 ~~~~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
+.. ...++++|||.+|+++++.++.
T Consensus 110 ~~~-~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 110 GVD-PEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence 431 3457899999999999998543
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.2e-08 Score=91.41 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHhchh---hc--CCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCce
Q 042288 96 MKVPSIESVARAVLPKF---YS--GDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGR 166 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~---~~--~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~ 166 (515)
.+.++++++.+.+...+ +. ..++|.+.+ .++++| .++|+|++....++.+.++ +|+...+..-
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~------- 131 (213)
T TIGR01449 60 PDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVL------- 131 (213)
T ss_pred cChHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEE-------
Confidence 45555555555444322 11 235665554 566789 6678999999999999998 8975332111
Q ss_pred eeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 167 STGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+++. ....+.-+.+.+...+...+ ...++++|||.+|+.+.+.+|-+.+
T Consensus 132 ~~~~----~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 132 IGGD----SLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred EecC----CCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 1110 00011123344444443322 2347889999999999999998766
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2e-07 Score=89.82 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCHHHHHHHHHHHhchhh-----cCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCc
Q 042288 95 GMKVPSIESVARAVLPKFY-----SGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKG 165 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~-----~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G 165 (515)
..+.++++++.+++...+. ....+|++. +.++++| .++|+|++....++++.+. +|++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~------- 138 (226)
T PRK13222 67 EPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSV------- 138 (226)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccE-------
Confidence 4666777766665543221 133555554 4666788 5678999999999999998 887543211
Q ss_pred eeeeEEecCCccccccH--HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 166 RSTGFVKSPGVLVGKNK--AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 166 ~~tG~i~~~~~~~g~~K--~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+++ .. .+..| .+.++..+...+ ...++++|||.+|+.+.+.+|-..+
T Consensus 139 ~~~~-----~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 139 VIGG-----DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred EEcC-----CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 1111 01 12222 333444433321 2447889999999999999998543
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.4e-07 Score=88.18 Aligned_cols=112 Identities=15% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhchhh----cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCce
Q 042288 95 GMKVPSIESVARAVLPKFY----SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGR 166 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~ 166 (515)
+.+.+..+++.+.|.+.+. ...++|.+.+ .++++| ..+|+|+++...++++.++ +|++..+.. +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~-i------ 147 (272)
T PRK13223 76 GVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRW-I------ 147 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeE-E------
Confidence 3455555555444433221 1234565555 566788 5678999999999999997 887543221 1
Q ss_pred eeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccce
Q 042288 167 STGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+++...+ .+.-+.+.++..+...+ ...++++||+.+|+.+.+.+|-..
T Consensus 148 ~~~d~~~----~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 148 IGGDTLP----QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EecCCCC----CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence 1111000 11123333333333221 245789999999999999998753
|
|
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.5e-07 Score=100.55 Aligned_cols=173 Identities=17% Similarity=0.184 Sum_probs=113.2
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEE---ecccchhhhhhcCCeeEEecCChhh-------HHHHHHHHH
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGR----PIPAVT---YSLSRLSELISPIKTVRLTRDRATD-------ASMIEKLLE 374 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~---k~~~~~g~~~~~~~~i~idR~~~~~-------~~~~~~~l~ 374 (515)
...+.|+|.-|.|++|.+++..++-. |.+..+ -+.+.+|++++..|++||.|+-+.. .+-..+...
T Consensus 294 ~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~ 373 (810)
T COG2937 294 DGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFS 373 (810)
T ss_pred cCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHh
Confidence 35689999999999999999887621 112122 2268889999999999999975533 233455667
Q ss_pred cC-CeEEecCCeeeCCCccccccchh----hc-------cCCcEEEEEEEcCccCccCccc---CC-CccCCccccc---
Q 042288 375 KG-DLVICPEGTTCREPFLLRFSALF----AE-------LTDEVVPVAMSNRMSMFHGTTA---RG-WKGMDPFYFF--- 435 (515)
Q Consensus 375 ~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~-------~~~pVvPV~i~~~~~~~~~~~~---~~-~~~~~~~~~~--- 435 (515)
+| ++--|=||+||+.|.|++-|.|. .+ -.+-+|||.|-|...+-.++.+ +| -+-.+.+|++
T Consensus 374 rgysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v~Ev~tYa~ElrGa~K~kE~~~~l~r~ 453 (810)
T COG2937 374 RGYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHVHEVGTYAKELRGATKEKESLRWLLRV 453 (810)
T ss_pred CCcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhHhhHHHHHHHhcCCcCCcccHHHHHHH
Confidence 89 99999999999999999999994 11 1367789999996443222211 12 1222222222
Q ss_pred -c----CCCCeEEEEEeccccCccccC-------CC-----------CCHHHHHHHHHHHHHHHcCCCc
Q 042288 436 -M----NPSPAYEVTFLNKLPYELTCS-------AG-----------KSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 436 -~----~p~~~v~V~~l~pi~~~~~~~-------~~-----------~~~~~la~~v~~~ia~~l~~~~ 481 (515)
. +...++.|.|++||+...+-+ ++ .+...++.+|+..|.++-.+.+
T Consensus 454 i~aqk~Rn~Gq~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna 522 (810)
T COG2937 454 IKAQKLRNLGQGYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNA 522 (810)
T ss_pred HHHHhhhhcCcEEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCH
Confidence 1 112348999999998654421 01 1234577777777766555443
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-06 Score=81.13 Aligned_cols=179 Identities=17% Similarity=0.199 Sum_probs=99.7
Q ss_pred ccCCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHH-HHcCCCHHH
Q 042288 22 ASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFA-TFAGMKVPS 100 (515)
Q Consensus 22 ~~~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~G~~~~~ 100 (515)
+.++....+++||||.||++.||- .|.... .........+. ..+|.-. ..+. +.+++.. -=.|.++++
T Consensus 7 s~~~~~ril~~FDFD~TIid~dSD-~wVv~~-lp~~~l~~qL~--~t~p~~~------Wne~-M~rv~k~Lheqgv~~~~ 75 (256)
T KOG3120|consen 7 SASSSPRILLVFDFDRTIIDQDSD-NWVVDE-LPTTDLFNQLR--DTYPKGF------WNEL-MDRVFKELHEQGVRIAE 75 (256)
T ss_pred ccccCCcEEEEEecCceeecCCcc-hHHHHh-cccchhHHHHH--Hhcccch------HHHH-HHHHHHHHHHcCCCHHH
Confidence 444446789999999999999883 454321 21112112221 1122100 0111 1122211 156899999
Q ss_pred HHHHHHHHhchhhcCCCcHHHHHHH---HhCC--CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-CceeeeE
Q 042288 101 IESVARAVLPKFYSGDLHPETWRVF---SSCG--RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRSTGF 170 (515)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~~~~~l---~~~G--~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~tG~ 170 (515)
+++..+.. + +.|.+++.+ ++.| ..+|||-+..++++.+.+. +|+ +.++.+.-.++ +|+++=+
T Consensus 76 ik~~~r~i-P------~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~ 147 (256)
T KOG3120|consen 76 IKQVLRSI-P------IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVR 147 (256)
T ss_pred HHHHHhcC-C------CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEee
Confidence 99866664 4 346666644 4688 4577999999999999997 896 45666666665 6776532
Q ss_pred EecC--Ccc---ccccHHHHHHHHhc---CCCC-C-ceEEEeCCcCcH-HHHhcccccee
Q 042288 171 VKSP--GVL---VGKNKAGALMKMLG---DDEE-M-PDIGLGDRKTDS-LFLNLCKESYM 219 (515)
Q Consensus 171 i~~~--~~~---~g~~K~~~l~~~~~---~~~~-~-~~~aygDS~~Dl-pmL~~a~~~~~ 219 (515)
--.. .|. ..-=|-..+.++.. +++. + ..++.||+.||+ |++.....=|+
T Consensus 148 pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~a 207 (256)
T KOG3120|consen 148 PYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVA 207 (256)
T ss_pred cCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCcee
Confidence 1111 121 11113333333322 1222 2 346679999996 66665555443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.6e-07 Score=87.64 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=57.6
Q ss_pred CEEEEecCcHHHHHHHHHhhcCCcEEEeceEE-Ee---C-c--eeeeEEecCCccc---cccHHHHHHH---HhcCCC-C
Q 042288 130 RRCVLTANPRIMVEAFLKDFLGADMVIGTEIC-VY---K-G--RSTGFVKSPGVLV---GKNKAGALMK---MLGDDE-E 195 (515)
Q Consensus 130 ~~vivSaS~~~~v~~ia~~~lGid~vigt~l~-~~---~-G--~~tG~i~~~~~~~---g~~K~~~l~~---~~~~~~-~ 195 (515)
..++-+++.+.+.+.+ ++ .|+.-+-|.+.- +- + + .+||.+..... . +..|.++++. .+.... .
T Consensus 150 Ep~~w~~~~~~~~~~~-~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~-~~~~~~dKg~A~~~L~~~y~~~~~~ 226 (302)
T PRK12702 150 EIFSYSGDPARLREAF-AQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLA-AEPNSLPGEQAVQLLLDCYQRHLGP 226 (302)
T ss_pred cceEecCCHHHHHHHH-HH-cCCeEEecCceEEecccccccccccccccccccc-cccCCCCHHHHHHHHHHHHHhccCC
Confidence 4566799988774444 44 788766666643 11 1 1 24565433211 2 4466665544 444321 1
Q ss_pred CceEEEeCCcCcHHHHhccccceee-CCCC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV-PPNP 224 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V-np~~ 224 (515)
-.++|.|||.||+|||+.|+.+|+| +|+.
T Consensus 227 ~~tiaLGDspND~~mLe~~D~~vvi~~~~~ 256 (302)
T PRK12702 227 IKALGIGCSPPDLAFLRWSEQKVVLPSPIA 256 (302)
T ss_pred ceEEEecCChhhHHHHHhCCeeEEecCCCC
Confidence 2478999999999999999999999 3444
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.3e-06 Score=79.77 Aligned_cols=112 Identities=14% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHhchh---h---cCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEE
Q 042288 95 GMKVPSIESVARAVLPKF---Y---SGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICV 162 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~---~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~ 162 (515)
|.+.++++++.++|...+ + ...++|.+. +.++++| ...|+|++....++.+.+. +|++ ..+-. +
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~-i-- 135 (220)
T TIGR03351 60 GADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDVDA-V-- 135 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccCCE-E--
Confidence 666666665555444322 1 124555555 4667789 5678999999999999997 8864 32211 1
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCCC---CceEEEeCCcCcHHHHhccccce
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE---MPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~---~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+++.-.+ .+.-+.+.+...+...+. ..++.+|||.+|+..-+.+|-++
T Consensus 136 ----~~~~~~~----~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 136 ----VCPSDVA----AGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ----EcCCcCC----CCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 1100000 111133344443333222 34788999999999999999987
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.3e-06 Score=81.20 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=55.2
Q ss_pred CcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|. +++.++++| ...|+|.+....++.+.++ +|++..+.. .+. +.-.+.- .| ..+-...+.+.++.
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~--i~~-~~~~~~~-KP----~p~~~~~~~~~l~~ 166 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRCAV--LIG-GDTLAER-KP----HPLPLLVAAERIGV 166 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhcccE--EEe-cCcCCCC-CC----CHHHHHHHHHHhCC
Confidence 4554 445677899 5578999999888888887 887543211 110 0000000 00 11122333333443
Q ss_pred CCCCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
. ...++++|||.+|+.+-+.+|-..+
T Consensus 167 ~-p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 167 A-PTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred C-hhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 1 2447899999999999999998754
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-05 Score=76.24 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=54.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| .++|+|.++...++...++ +|+ |.+++++-. |.- .| ..+--+.+.+.++..
T Consensus 99 ~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~-------~~~-KP----~~~~~~~~~~~~~~~- 164 (198)
T TIGR01428 99 AGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAV-------RAY-KP----APQVYQLALEALGVP- 164 (198)
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhc-------CCC-CC----CHHHHHHHHHHhCCC-
Confidence 4455677889 5678999999999999998 886 444444310 100 00 011112222333331
Q ss_pred CCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
...++.+|||.+|+..-+.+|-..+ |++
T Consensus 165 p~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 165 PDEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 2447889999999999888887643 454
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.1e-06 Score=79.09 Aligned_cols=91 Identities=19% Similarity=0.119 Sum_probs=56.1
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+. +.++++| ...|+|++....++.+.+. +|++..+-.-+..++ .+ .+.-|.+.++..+..
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-------~~----~~Kp~p~~~~~~~~~ 150 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDD-------VE----HAKPDPEPVLKALEL 150 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCc-------CC----CCCCCcHHHHHHHHH
Confidence 445544 4667889 5678999999999999998 897543322111110 00 111123333333322
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-..+
T Consensus 151 ~~~~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 151 LGAKPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 11 2347889999999999999998765
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.3e-06 Score=76.35 Aligned_cols=109 Identities=11% Similarity=0.113 Sum_probs=61.7
Q ss_pred CCCHHHHHHHHHH---Hhchhhc---CCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceE
Q 042288 95 GMKVPSIESVARA---VLPKFYS---GDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEI 160 (515)
Q Consensus 95 G~~~~~l~~~~~~---~~~~~~~---~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l 160 (515)
+.+.++++++.+. ++.+.+. ..++|.+.+ .++++| .++|+|++ ..++.+.+. +|++ .++++.-
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~ 137 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADE 137 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhh
Confidence 5677777666543 3333221 346666555 566788 56778888 557888887 8864 4444321
Q ss_pred EEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 161 CVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 161 ~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
. +. ..| ..+-...+.+.++.. ...++.+|||.+|+..-+.+|-..+
T Consensus 138 ~-------~~-~kp----~~~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 138 V-------KE-GKP----HPETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred C-------CC-CCC----ChHHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 0 00 011 111122233333321 2347889999999999888876543
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.4e-06 Score=79.48 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=58.6
Q ss_pred CCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccH--HHHHH
Q 042288 116 DLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALM 187 (515)
Q Consensus 116 ~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~ 187 (515)
.++|++ ++.++++| .++|+||.....++.++++ +|++. +.+-.. + ..+.| .+.++
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~~~~v~a~~~------------~----kP~~k~~~~~i~ 189 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIFDSIVFARVI------------G----KPEPKIFLRIIK 189 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSCSEEEEESHE------------T----TTHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccccccccccccc------------c----cccchhHHHHHH
Confidence 455554 45677899 6788999999999999998 99942 333211 1 34567 77777
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhccc
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~ 215 (515)
++--. ...+.++||+.||.+|++.||
T Consensus 190 ~l~~~--~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVK--PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCT--GGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcC--CCEEEEEccCHHHHHHHHhCc
Confidence 74322 346888999999999999886
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=89.57 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=98.6
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC---CCccEEEec----ccchhhhhhcCCeeEEecCC------hhh-H------HHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG---RPIPAVTYS----LSRLSELISPIKTVRLTRDR------ATD-A------SMI 369 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~g~~~~~~~~i~idR~~------~~~-~------~~~ 369 (515)
+-|.|+++=|.|.+|-+++.-++- -....+|.- +|.|||+++.+|.+||.|.- +++ + --+
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi 236 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYI 236 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHH
Confidence 358999999999999998876552 122445442 89999999999999997731 122 1 235
Q ss_pred HHHHHcC-CeEEecCCeeeCCCccccccchh-------hc----cCCcEEEEEEEcCccC---ccCcccCCCccCCcccc
Q 042288 370 EKLLEKG-DLVICPEGTTCREPFLLRFSALF-------AE----LTDEVVPVAMSNRMSM---FHGTTARGWKGMDPFYF 434 (515)
Q Consensus 370 ~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-------~~----~~~pVvPV~i~~~~~~---~~~~~~~~~~~~~~~~~ 434 (515)
.+.|++| ++=+|-|||||+.|.-.--|.|. ++ .++=++||.+.|.+.. +.+.+.+--+..+.+|.
T Consensus 237 ~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRiveG~f~~EQ~G~pK~~ES~~~ 316 (715)
T KOG3729|consen 237 EQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRVVEGIFLHEQMGIPKVRESVLG 316 (715)
T ss_pred HHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHHhhhhhhHHhcCCCCccHHHHH
Confidence 6789999 99999999999888777778883 22 2467999999996532 11111111112223332
Q ss_pred --------ccCCCCeEEEEEeccccCcc
Q 042288 435 --------FMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 435 --------~~~p~~~v~V~~l~pi~~~~ 454 (515)
+.+.+..++|.|..|++..+
T Consensus 317 v~rGi~~~L~kNYG~vR~DF~~P~Sl~E 344 (715)
T KOG3729|consen 317 VFRGIFSGLSKNYGVVRMDFGRPISLTE 344 (715)
T ss_pred HHHHHHHHHhhcCCeEEEecCCCccHHH
Confidence 22334459999999998764
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.5e-05 Score=76.67 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=55.0
Q ss_pred CcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
++|++ ++.++++| .++|+|.+....++...+. +|++..+-. .+++.-.+ .+.-+.+.++..+..
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~-------i~~~~~~~----~~KP~~~~~~~~~~~ 162 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDA-------VITSEEEG----VEKPHPKIFYAALKR 162 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccE-------EEEeccCC----CCCCCHHHHHHHHHH
Confidence 45554 45667788 5678999988888888887 887532211 11111111 111122333333332
Q ss_pred CC--CCceEEEeCCc-CcHHHHhccccce-eeCC
Q 042288 193 DE--EMPDIGLGDRK-TDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 193 ~~--~~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 222 (515)
.+ ...++.+|||. +|+..-+.+|-.. .|+.
T Consensus 163 ~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 163 LGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred cCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 21 23478899997 8999999998654 4543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=3e-06 Score=85.74 Aligned_cols=163 Identities=13% Similarity=0.130 Sum_probs=100.6
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHH-hcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLST-ALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~-~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
+++++|.|+++..- ..++|+|++++|.+++|...... ....++..+++. .+.+-.++. ..|.-.++. ...
T Consensus 96 ~v~i~g~e~l~~a~-~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~~n~~~~~~~~~~R~~~g~~~i~~--~~~ 172 (298)
T PRK08419 96 KVTFINEENLLDAL-KKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLLKSAPINEMISKRREQFGIELIDK--KGA 172 (298)
T ss_pred cEEEECHHHHHHHH-HcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCCCChHHHHHHHHHHHHcCCeeEEC--ccH
Confidence 67889999875210 03679999999999999986543 333467778776 455544433 234444432 335
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccc-------cccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLL-------RFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~-------~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
+..+.+.|++| .++++|....+ .++... .+..|. ...++||+||.+....
T Consensus 173 ~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~----------------- 235 (298)
T PRK08419 173 MKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD----------------- 235 (298)
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC-----------------
Confidence 77888999999 89999955543 333333 446662 5579999999995321
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..++|++.||++.++.....++..+.++++-+.+++......
T Consensus 236 ------~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P 278 (298)
T PRK08419 236 ------YSHFTITFFPPIRSKITDDAEADILEATQAQASACEEMIRKKP 278 (298)
T ss_pred ------CCeEEEEEcCCccCCCCCChHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1127888899997543210112234455555555555444333
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.4e-05 Score=74.65 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=50.3
Q ss_pred HHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--
Q 042288 121 TWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE-- 194 (515)
Q Consensus 121 ~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~-- 194 (515)
.++.++++....|+|+++...++...++ +|++ .+++++-. + ...-+.+.+...+...+
T Consensus 95 ~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-------~--------~~KP~p~~~~~~~~~~~~~ 158 (188)
T PRK10725 95 VVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDV-------Q--------HHKPAPDTFLRCAQLMGVQ 158 (188)
T ss_pred HHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhc-------c--------CCCCChHHHHHHHHHcCCC
Confidence 3334443335678999999999999998 8864 44443310 0 11123333444333321
Q ss_pred CCceEEEeCCcCcHHHHhcccccee
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.+|||.+|+.--+.+|-.++
T Consensus 159 ~~~~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 159 PTQCVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred HHHeEEEeccHhhHHHHHHCCCEEE
Confidence 2337889999999999888887654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-05 Score=78.70 Aligned_cols=88 Identities=20% Similarity=0.242 Sum_probs=56.8
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+.+ .++++| ...|+|++....++.+.+. +|+...+-. + +++. . . ..|.+.+...+..
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~~-v------i~~~----~--~-~~k~~~~~~~l~~ 207 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFSV-V------QAGT----P--I-LSKRRALSQLVAR 207 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheEE-E------EecC----C--C-CCCHHHHHHHHHH
Confidence 4565554 666789 6678999999999999998 897543321 1 1111 0 1 1244444444332
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-..+
T Consensus 208 ~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 208 EGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred hCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 11 2347889999999999999988754
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.7e-05 Score=76.71 Aligned_cols=107 Identities=14% Similarity=0.053 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHhch---hhc--CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-----EEEeceEEE
Q 042288 97 KVPSIESVARAVLPK---FYS--GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-----MVIGTEICV 162 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~---~~~--~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-----~vigt~l~~ 162 (515)
+.++++++.++|... .+. ..++|.+. +.++++| ...|+|+++...++.+.++ +|++ .+++++-
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~-- 151 (253)
T TIGR01422 75 TEADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDD-- 151 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEcccc--
Confidence 455666555555321 111 23455544 4667889 6678999999999999887 7753 3333321
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCC---CCceEEEeCCcCcHHHHhcccccee
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ .+.-+.+.+...+...+ ...++.+|||.+|+..=+.+|-..+
T Consensus 152 ---------~~----~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i 198 (253)
T TIGR01422 152 ---------VP----AGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTV 198 (253)
T ss_pred ---------CC----CCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEE
Confidence 00 01112223332222211 2347889999999999999986554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-05 Score=77.66 Aligned_cols=92 Identities=21% Similarity=0.184 Sum_probs=56.5
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCce
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD 198 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~ 198 (515)
+++++++++| ...|+|.-++..++.+++. +|++..+......++. ....|+ ..-+..+.+.++.. ....
T Consensus 96 e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~----~~~KP~----P~~l~~~~~~~~~~-~~~~ 165 (220)
T COG0546 96 ELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDV----PPPKPD----PEPLLLLLEKLGLD-PEEA 165 (220)
T ss_pred HHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCC----CCCCcC----HHHHHHHHHHhCCC-hhhe
Confidence 4455777899 6678999999999999998 9976433322211000 000011 12222333444442 1246
Q ss_pred EEEeCCcCcHHHHhccccc-eeeC
Q 042288 199 IGLGDRKTDSLFLNLCKES-YMVP 221 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~-~~Vn 221 (515)
+.+|||.+|+.+=+.|+-+ +.|.
T Consensus 166 l~VGDs~~Di~aA~~Ag~~~v~v~ 189 (220)
T COG0546 166 LMVGDSLNDILAAKAAGVPAVGVT 189 (220)
T ss_pred EEECCCHHHHHHHHHcCCCEEEEE
Confidence 8899999999999999955 4343
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=78.50 Aligned_cols=84 Identities=12% Similarity=0.042 Sum_probs=56.1
Q ss_pred cHHHHHHHHhCC-CEEEEecC----cHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 118 HPETWRVFSSCG-RRCVLTAN----PRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 118 ~~~~~~~l~~~G-~~vivSaS----~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
..+++++|+++| .+.+||+. .+..++.+.+. +|+++.+. . .++|...+. ...+|..++ ..
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~--~-----i~~~d~~~~---~Kp~~~~~l----~~ 183 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNP--V-----IFAGDKPGQ---YQYTKTQWI----QD 183 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchhee--E-----EECCCCCCC---CCCCHHHHH----Hh
Confidence 457777889999 56789998 88899999997 99975431 1 122222111 112343333 22
Q ss_pred CCCCceEEEeCCcCcHHHHhccccce
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
...+++||||.+|+.--+.|+...
T Consensus 184 --~~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 184 --KNIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred --CCCeEEEeCCHHHHHHHHHCCCCE
Confidence 344788999999999888888774
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-05 Score=76.17 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=56.9
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
++|++.+ .++++| ..+|+|++....++...+. +|++..+-.-+..++ +..+.-|.+.+++.+..
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~-----------~~~~KP~~~~~~~~~~~ 143 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDE-----------VPRPKPAPDIVREALRL 143 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCc-----------CCCCCCChHHHHHHHHH
Confidence 4555554 666889 6778999999999999887 897533321111000 00112234444444333
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-+.+
T Consensus 144 ~~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 144 LDVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred cCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 22 2347889999999999999998764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.2e-05 Score=72.81 Aligned_cols=90 Identities=16% Similarity=0.071 Sum_probs=55.2
Q ss_pred CCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 116 DLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.++|++.+ .++++..++|+|++....+++..+. +|+ |.++++.-. + + ..-+.+.++.
T Consensus 97 ~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-----------~--~--~KP~~~~~~~ 160 (224)
T TIGR02254 97 QLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDA-----------G--I--QKPDKEIFNY 160 (224)
T ss_pred eeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCcc-----------C--C--CCCCHHHHHH
Confidence 46676665 4455534577999999999999998 886 444443210 0 0 0112222222
Q ss_pred ---Hh-cCCCCCceEEEeCCc-CcHHHHhccccce-eeCC
Q 042288 189 ---ML-GDDEEMPDIGLGDRK-TDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 189 ---~~-~~~~~~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 222 (515)
.+ +.. ...++.+|||. +|+..-+.+|-.. .++.
T Consensus 161 ~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 161 ALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 23 321 34478899998 7999999988754 4554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.5e-05 Score=85.54 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=58.2
Q ss_pred CCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|.+. ++++++| ...|+|++....++.+.+. +|++..+..-+..++ . .+..|..-+...+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~-----------v-~~~~kP~~~~~al~ 396 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQ-----------I-NSLNKSDLVKSILN 396 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCC-----------C-CCCCCcHHHHHHHH
Confidence 3555544 4677889 6678999999999999997 897543322111111 0 11123344444443
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
..+...++++|||.+|+..-+.||-..+
T Consensus 397 ~l~~~~~v~VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 397 KYDIKEAAVVGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred hcCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence 3223458899999999999999997543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.9e-05 Score=74.76 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=54.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHH---HHhc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLG 191 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~ 191 (515)
++++.++++| ...|+|++....++...++ +|++ .+++.+-. + .+.-+.+.+. +.++
T Consensus 115 e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~-----------~----~~KP~p~~~~~a~~~~~ 178 (248)
T PLN02770 115 KLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSEC-----------E----HAKPHPDPYLKALEVLK 178 (248)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcC-----------C----CCCCChHHHHHHHHHhC
Confidence 4445677899 6688999999999999998 8864 34443310 0 1111222222 2333
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.. ...++.+|||.+|+..-+.+|-.++
T Consensus 179 ~~-~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 179 VS-KDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred CC-hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 21 2447889999999999999998865
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=98.14 E-value=3e-05 Score=73.36 Aligned_cols=83 Identities=19% Similarity=0.179 Sum_probs=49.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP 197 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~ 197 (515)
.++++.++++| ...|+|+++...++.+.+. +|++..+-.-+..++. +. .|. .+.-...+++ ++.. ...
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~---~~--KP~---p~~~~~~~~~-~~~~-~~~ 180 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDC---PP--KPN---PEPLILAAKA-LGVE-ACH 180 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCC---CC--CcC---HHHHHHHHHH-hCcC-ccc
Confidence 57778888899 6788999999999999998 9976544211111110 00 111 1111112222 3321 245
Q ss_pred eEEEeCCcCcHHHHh
Q 042288 198 DIGLGDRKTDSLFLN 212 (515)
Q Consensus 198 ~~aygDS~~DlpmL~ 212 (515)
++.+|||.+|+..-+
T Consensus 181 ~i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 181 AAMVGDTVDDIITGR 195 (197)
T ss_pred EEEEeCCHHHHHHHH
Confidence 788999999987543
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.2e-05 Score=75.76 Aligned_cols=87 Identities=17% Similarity=0.180 Sum_probs=55.5
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|.+.+ .++++| ..+|+|++....++.+.+. +|++ .+++++- +..+.-+.+.+..
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d---------------~~~~KP~Pe~~~~ 173 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAED---------------VYRGKPDPEMFMY 173 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEeccc---------------CCCCCCCHHHHHH
Confidence 4555554 566789 6678999999999999997 8864 3444321 1011112333333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+...+ ...++++|||.+|+..-+.+|-.++
T Consensus 174 a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 174 AAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred HHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 333221 2347889999999999999988653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.14 E-value=5e-06 Score=92.11 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=77.5
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| +++++||.....++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~a-----------------~~-~PedK~~~v~~l 504 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFIA-----------------EA-TPEDKIALIRQE 504 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEEc-----------------CC-CHHHHHHHHHHH
Confidence 4456666555 677899 6778999999999999999 99987654 24 678899999998
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
..+ ......+||+.||.|+|+.|+.++++++.....+-|.
T Consensus 505 q~~--g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa 544 (675)
T TIGR01497 505 QAE--GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA 544 (675)
T ss_pred HHc--CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 654 3457778999999999999999999997655554443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=98.10 E-value=3e-05 Score=72.18 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=49.7
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
..+|.+.+ .++++| ...|+|.+.. ...+.++ +|++ .++++.- .+ ...-+.+.++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAE-----------IK----KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhh-----------cC----CCCCChHHHH
Confidence 45666555 566789 5677887643 3566776 8854 3333220 00 1112334444
Q ss_pred HHhcCCCC--CceEEEeCCcCcHHHHhcccccee
Q 042288 188 KMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 188 ~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
..+...+. ..++.+|||.+|+..-+.+|-..+
T Consensus 149 ~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 149 AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence 44333222 337889999999999888887643
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.4e-06 Score=82.62 Aligned_cols=164 Identities=12% Similarity=0.102 Sum_probs=94.1
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCC-------CccEEEec----ccchhhhh--hcCCeeEEec---CCh---------
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGR-------PIPAVTYS----LSRLSELI--SPIKTVRLTR---DRA--------- 363 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~-------~~~~v~k~----~~~~g~~~--~~~~~i~idR---~~~--------- 363 (515)
.+.++|++|||||-.|+-++..++.. .+.+|+-. -|+..+|- +-+=||+..+ +.+
T Consensus 199 ~g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~ 278 (426)
T PLN02349 199 QGHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKA 278 (426)
T ss_pred cCCCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHH
Confidence 34689999999999999988776532 23555542 24433321 1223555433 111
Q ss_pred --hhHHHHHHHHHcC--CeEEecCCeeeCCCc-cc-----cccchh--------hccCC--cEEEEEEEcCccCccCccc
Q 042288 364 --TDASMIEKLLEKG--DLVICPEGTTCREPF-LL-----RFSALF--------AELTD--EVVPVAMSNRMSMFHGTTA 423 (515)
Q Consensus 364 --~~~~~~~~~l~~G--~l~IFPEGTrs~~~~-l~-----~Fk~Gf--------~~~~~--pVvPV~i~~~~~~~~~~~~ 423 (515)
++++.++..|++| .++|||||||++... -. ||-+-. ..+++ -+.|.++..+..+|...+.
T Consensus 279 N~kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~~yDImPPP~~V 358 (426)
T PLN02349 279 NTRTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAMLSYDIMPPPPQV 358 (426)
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHHhCccCCCcccc
Confidence 1255666778886 689999999996544 33 344331 22454 5889999998888765522
Q ss_pred CCCccCCccccccCCCCeEEEEEeccccCccccC----CCCCHHHHHHHHHHHHHHH
Q 042288 424 RGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCS----AGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 424 ~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~----~~~~~~~la~~v~~~ia~~ 476 (515)
- -...+.-.-.+. -+-+.++|-|+.++... ..+.++++++.+...+.+.
T Consensus 359 E-keIGE~R~v~F~---gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~ 411 (426)
T PLN02349 359 E-KEIGERRLVGFT---GVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQ 411 (426)
T ss_pred c-cccCceeeeeee---cceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 1 000111111122 26677888887654321 1233466777776665543
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.4e-05 Score=81.03 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|.+.+ .++++| ...|+|+++...++.+.+. +|+ |.+++++-. + .+.-+.+.+..
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv-----------~----~~KP~Peifl~ 280 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDV-----------Y----RGKPDPEMFIY 280 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcC-----------C----CCCCCHHHHHH
Confidence 4555554 566789 6788999999999999998 886 445443311 0 11112233333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 281 A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 281 AAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 322211 3447889999999999998887655
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=7.7e-05 Score=71.76 Aligned_cols=89 Identities=18% Similarity=0.150 Sum_probs=52.2
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEeCceeeeEEecCCccccccHHHHHH--
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM-- 187 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~-- 187 (515)
++|.+. +.++++| ...|+|.+....++...+. +|+. .+++.+- + + ...-+.+.+.
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~~~~~i~~~~~----------~-~----~~KP~p~~~~~~ 147 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLPAPEVFVTAER----------V-K----RGKPEPDAYLLG 147 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCCCccEEEEHHH----------h-c----CCCCCcHHHHHH
Confidence 455544 4667899 6788998877777766665 6653 2222210 0 0 0001112222
Q ss_pred -HHhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 188 -KMLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 188 -~~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
+.++.. ...++.+|||..|+..-+.+|-. +.|+.
T Consensus 148 ~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 148 AQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred HHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 223321 34478899999999999999864 55654
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00012 Score=72.65 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHhchh---hc--CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-----cEEEeceEEE
Q 042288 97 KVPSIESVARAVLPKF---YS--GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-----DMVIGTEICV 162 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~---~~--~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-----d~vigt~l~~ 162 (515)
+.++++++.++|...+ +. ...+|. +++.++++| ...|+|+++...++.+.+. +|+ |.+++++-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~-- 153 (267)
T PRK13478 77 TEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDD-- 153 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCc--
Confidence 4455555544443221 11 234554 445677889 6678999999998888876 554 33333221
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCC---CCceEEEeCCcCcHHHHhcccccee
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ .+.-+.+.+...+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 154 ---------~~----~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i 200 (267)
T PRK13478 154 ---------VP----AGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTV 200 (267)
T ss_pred ---------CC----CCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEE
Confidence 00 11112233333333222 2347889999999999999987654
|
|
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.6e-06 Score=83.74 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=106.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc---CCCccEEEec-----ccchhhhhhcCCeeEEecCC
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL---GRPIPAVTYS-----LSRLSELISPIKTVRLTRDR 362 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~---~~~~~~v~k~-----~~~~g~~~~~~~~i~idR~~ 362 (515)
|+.|.-.+..++.. +..+.|+|+.+.|.||+|.++|..++ .-++..+|.- ...+|.+++..|++|..|+-
T Consensus 132 g~yVNe~~~~~vr~--~~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsF 209 (685)
T KOG3730|consen 132 GFYVNEASMANVRK--DMGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSF 209 (685)
T ss_pred ceeECHHHHHHHHH--HhccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeecc
Confidence 66665555555531 12466999999999999999887654 2234445442 56789999999999999976
Q ss_pred hhh-------HHHHHHHHHcC--CeEEecCCeeeCCCccccccchh--------hc---cCCcEEEEEEEcCccC-----
Q 042288 363 ATD-------ASMIEKLLEKG--DLVICPEGTTCREPFLLRFSALF--------AE---LTDEVVPVAMSNRMSM----- 417 (515)
Q Consensus 363 ~~~-------~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~Gf--------~~---~~~pVvPV~i~~~~~~----- 417 (515)
..+ .+-+...+.++ .+=.|-|||||+...-+.-|-|. +. -++-||||.+.|.+.+
T Consensus 210 g~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~YdkILEE~Ly 289 (685)
T KOG3730|consen 210 GNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDKILEEQLY 289 (685)
T ss_pred CCceehHHHHHHHHHHHHhcCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHHHHHHHHH
Confidence 544 35566677888 78999999999887766667773 22 2468999999996432
Q ss_pred -------ccCccc-CCCccCCccccc-cCCCCeEEEEEeccccCccc
Q 042288 418 -------FHGTTA-RGWKGMDPFYFF-MNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 418 -------~~~~~~-~~~~~~~~~~~~-~~p~~~v~V~~l~pi~~~~~ 455 (515)
|+.... .|. ......+ -+-|. +.+.|++||+..++
T Consensus 290 vYELLGvPKPKEST~gl--lKArkil~e~fGs-~fl~FGePISvr~~ 333 (685)
T KOG3730|consen 290 VYELLGVPKPKESTKGL--LKARKILDERFGS-MFLDFGEPISVREF 333 (685)
T ss_pred HHHHhCCCCcccchhHH--HHHHHHHHhhcCc-EEEecCCCccHHHH
Confidence 222210 110 0000011 12345 89999999987765
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00026 Score=68.56 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=52.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccH--HHHHH---HH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALM---KM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~---~~ 189 (515)
+.++.++++| ...|+|.+....++...+. +|+ |.+++++-. +..| .+.+. +.
T Consensus 100 e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~-----------------~~~KP~p~~~~~~~~~ 161 (224)
T PRK14988 100 PFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTF-----------------GYPKEDQRLWQAVAEH 161 (224)
T ss_pred HHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeC-----------------CCCCCCHHHHHHHHHH
Confidence 4445677899 5678999988888888886 885 455554411 1112 22222 33
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
++.. ...++++|||.+|+..=+.+|-..
T Consensus 162 ~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 162 TGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred cCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 3321 234788999999999988998864
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.6e-05 Score=70.99 Aligned_cols=83 Identities=20% Similarity=0.131 Sum_probs=63.6
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.|+++| .+.|+|+.+...++.++++ +|++..+... ..|.+.+++++...+ ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~~--------------------~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQGQ--------------------SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEecc--------------------cchHHHHHHHHHHcCCCHHH
Confidence 677888899 5678999999999999998 9998654210 136666666655422 234
Q ss_pred eEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
++++|||.+|++|++.++.++++++..
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v~~~~ 121 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAVADAH 121 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCCcC
Confidence 788999999999999999999997653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.96 E-value=9.7e-05 Score=69.74 Aligned_cols=113 Identities=4% Similarity=-0.129 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHhchhhc--CCCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeE
Q 042288 96 MKVPSIESVARAVLPKFYS--GDLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGF 170 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~~~--~~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~ 170 (515)
.+.++++++.+.|..+.+. -..+|.+.+ .+++++..+++|++.........+. +|++..+-.-. +..+++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f---~~i~~~~ 127 (197)
T PHA02597 52 CDQELAKKLIEKYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAF---SEVLMCG 127 (197)
T ss_pred ccHHHHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcc---cEEEEec
Confidence 3555566655555432211 124565555 5555666566676655444444454 66542221100 0111111
Q ss_pred EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcc--cccee
Q 042288 171 VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLC--KESYM 219 (515)
Q Consensus 171 i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a--~~~~~ 219 (515)
. ...|.+.+...+...+...++++|||.+|+.--+.+ |-.++
T Consensus 128 ~-------~~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 128 H-------DESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred c-------CcccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 1 122555555544442223467899999998877776 66544
|
2 hypothetical protein; Provisional |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0001 Score=70.96 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHhchhh--cCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEec
Q 042288 97 KVPSIESVARAVLPKFY--SGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKS 173 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~ 173 (515)
+.+++.+..++.+...+ ....+|.+.+.++.-+ .+.|+|++....++...++ +|++..+-..+ +++.-.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v------~~~~~~~ 139 (221)
T PRK10563 67 AKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKL------FSGYDIQ 139 (221)
T ss_pred CHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceE------eeHHhcC
Confidence 45666554443332221 1245677877777767 6788999999999988887 88743222111 1111001
Q ss_pred CCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhcccccee
Q 042288 174 PGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...-+.+.+...+...+. ..++.+|||.+|+.-=+.+|-+++
T Consensus 140 ----~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 ----RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred ----CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 011123344433333222 337889999999998888887765
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00022 Score=67.57 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHhchhh---cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCc
Q 042288 97 KVPSIESVARAVLPKFY---SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKG 165 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G 165 (515)
+.+++.+..++++..+. .-.++|++.+ .++++| .++|+|.+...+ +...+. +|+ |.++++.-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~-~~l~~~fd~i~~s~~----- 155 (203)
T TIGR02252 83 DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA-LGLLEYFDFVVTSYE----- 155 (203)
T ss_pred CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH-CCcHHhcceEEeecc-----
Confidence 34566666666554321 1134555555 566789 567789887654 677776 886 34443321
Q ss_pred eeeeEEecCCccccccH--HHHHHH---HhcCCCCCceEEEeCCc-CcHHHHhccccc
Q 042288 166 RSTGFVKSPGVLVGKNK--AGALMK---MLGDDEEMPDIGLGDRK-TDSLFLNLCKES 217 (515)
Q Consensus 166 ~~tG~i~~~~~~~g~~K--~~~l~~---~~~~~~~~~~~aygDS~-~DlpmL~~a~~~ 217 (515)
.+..| .+.++. .++.. ...++.+|||. +|+..=+.+|-.
T Consensus 156 ------------~~~~KP~~~~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 ------------VGAEKPDPKIFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred ------------cCCCCCCHHHHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence 11112 122232 33321 23478899997 899888777754
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.93 E-value=9.4e-05 Score=68.48 Aligned_cols=88 Identities=17% Similarity=0.089 Sum_probs=51.0
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
.++|.+.+ .++++| .++|+|+++... +.+.++ +|+ |.+++++- .+ ..--..+-.+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~-----------~~-~~KP~~~~~~~~~ 150 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGD-----------VG-RGKPDPDIYLLAL 150 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCC-----------CC-CCCCCHHHHHHHH
Confidence 35566555 566789 567899998887 767666 786 44444321 01 0000011122333
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+.++.. ...++.+|||..|+..-+.+|-..
T Consensus 151 ~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 151 KKLGLK-PEECLFVDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred HHcCCC-cceEEEEcCCHHHHHHHHHcCCEE
Confidence 333331 345788999999998888777643
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00013 Score=76.26 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=52.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| ...|+|++....++...++++|+ |.+++++-. + .+.-+.+.+...+...+
T Consensus 100 elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v-----------~----~~KP~p~~~~~a~~~lg 164 (382)
T PLN02940 100 RLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV-----------E----KGKPSPDIFLEAAKRLN 164 (382)
T ss_pred HHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc-----------C----CCCCCHHHHHHHHHHcC
Confidence 3445667889 67889999988888777622675 555554410 0 11112233333333211
Q ss_pred --CCceEEEeCCcCcHHHHhcccccee
Q 042288 195 --EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 195 --~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.+|||.+|+..-+.+|-..+
T Consensus 165 v~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 165 VEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred CChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 2447889999999999998887654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00039 Score=76.34 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=36.4
Q ss_pred cccHHHHHHHHhcCCC--CCceEEE--eCCcCcHHHHhccccceeeC-CCCCCCcc
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGL--GDRKTDSLFLNLCKESYMVP-PNPKVDPV 229 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~ay--gDS~~DlpmL~~a~~~~~Vn-p~~~l~~~ 229 (515)
|..|..+|+.++...+ .....++ |||.||++||+.|+.++++. |+.+.-.+
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~~~~~l 666 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGNKWHKM 666 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCCCCCcc
Confidence 4568887777654422 1234555 99999999999999999994 66655444
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00043 Score=62.95 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeee
Q 042288 98 VPSIESVARAVLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTG 169 (515)
Q Consensus 98 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG 169 (515)
.+++.+...++... -....+|++.+ .++++| .++++|.+....++...++ +|+ |.++++.-
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~--------- 128 (176)
T PF13419_consen 60 PEEIQELFREYNLE-SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDD--------- 128 (176)
T ss_dssp HHHHHHHHHHHHHH-GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGG---------
T ss_pred HHHHHHHhhhhhhh-hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccch---------
Confidence 55666655555211 12334555554 566688 5677999999999999998 885 45555431
Q ss_pred EEecCCccccccHH--HHHH---HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 170 FVKSPGVLVGKNKA--GALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 170 ~i~~~~~~~g~~K~--~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.+..|. ..++ +.++.. ...++.+|||..|+..-+.+|-..
T Consensus 129 --------~~~~Kp~~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 129 --------VGSRKPDPDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp --------SSSSTTSHHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred --------hhhhhhHHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence 111222 3333 333331 244788999999999888777543
|
... |
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00043 Score=64.35 Aligned_cols=148 Identities=14% Similarity=0.180 Sum_probs=92.9
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec---ccchhhhhhcCCeeEE----ecCChhhHHHHHHHHHcC-CeEE
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS---LSRLSELISPIKTVRL----TRDRATDASMIEKLLEKG-DLVI 380 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~---~~~~g~~~~~~~~i~i----dR~~~~~~~~~~~~l~~G-~l~I 380 (515)
..+|+|+..=|-=.+=.+.+.--. +.+..+... -.+...++..+|..-| +++...++..+.+.|++| ++.|
T Consensus 44 ~~~p~I~afWHg~l~l~p~~~~~~-~~~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~i 122 (214)
T COG2121 44 NEKPGIVAFWHGQLALGPFAFPKG-KKIYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAI 122 (214)
T ss_pred ccCCeEEEEeccccccchhhccCC-CcEEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEE
Confidence 467999999887443222222111 223333222 2334445555665544 333334477889999999 9999
Q ss_pred ecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCcccc
Q 042288 381 CPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTC 456 (515)
Q Consensus 381 FPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~ 456 (515)
-|+|-+..- .+-..|. ...++||+||.+.+++ .+.-.+ |.-+ -+..|..++++.+++|+..+
T Consensus 123 tpDgPkGp~---~~~~~Gii~LA~~sg~pi~pv~~~~sr-~~~lKs---WDk~----~IP~PFgk~~i~~gePi~~~--- 188 (214)
T COG2121 123 TPDGPKGPV---HKIGDGIIALAQKSGVPIIPVGVATSR-CWRLKT---WDKT----IIPLPFGKIKIVLGEPIEVD--- 188 (214)
T ss_pred cCCCCCCCc---eeccchhhHhhHhcCCCeEEEEEeeee-eeeecc---cccc----cccCccceeEEEecCceeec---
Confidence 999977543 3345773 4568999999999986 443331 2211 35667777999999999887
Q ss_pred CCCCCHHHHHHHHHHH
Q 042288 457 SAGKSSHDVANYIQRL 472 (515)
Q Consensus 457 ~~~~~~~~la~~v~~~ 472 (515)
.+++.+++.++.++.
T Consensus 189 -~D~~~~~l~~~~~~~ 203 (214)
T COG2121 189 -ADKDKEELEEKRQEV 203 (214)
T ss_pred -ccccHHHHHHHHHHH
Confidence 367777776665543
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0012 Score=61.46 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhC-CCEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeee
Q 042288 95 GMKVPSIESVARAVLPKFYSGDLHPETWRVFSSC-GRRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTG 169 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG 169 (515)
+.+.+++.+..++..... .-..++.+.+.++.- +..+|+|.++...++.+.+. +|+ |.+++++-.
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~-------- 133 (184)
T TIGR01993 64 EIDADEYLRYVHGRLPYE-KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTA-------- 133 (184)
T ss_pred CCCHHHHHHHHhccCCHH-hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecc--------
Confidence 455555554433321111 123567777877753 46788999999999999998 887 444444311
Q ss_pred EEecCCccccccHHHHHH---HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 170 FVKSPGVLVGKNKAGALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 170 ~i~~~~~~~g~~K~~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+..+....-+.+.++ +.++.. ...++.+|||..|+..=+.+|-..
T Consensus 134 ---~~~~~~~KP~p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 ---NPDYLLPKPSPQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ---cCccCCCCCCHHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 100000011222333 333431 234788999999988877777654
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00047 Score=69.74 Aligned_cols=157 Identities=14% Similarity=0.128 Sum_probs=100.8
Q ss_pred EEEE--cCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccch-hhhh---hcCCeeEE--ecC
Q 042288 293 RVYI--KGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRL-SELI---SPIKTVRL--TRD 361 (515)
Q Consensus 293 rv~v--~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~-g~~~---~~~~~i~i--dR~ 361 (515)
++++ +|.|++...- ..++|+|+++.|.+++|....... .+.++..+.+. .+.+ ..+. ...|.-.+ +++
T Consensus 89 ~v~i~~~g~e~l~~a~-~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 167 (298)
T PRK07920 89 RVRVSIEGLEHLDAAL-AAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERLKPESLYERFVAYRESLGFEVLPLTGG 167 (298)
T ss_pred hhhhccCCHHHHHHHH-hcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEeccCCHHHHHHHHHHHHhcCCEEEecCCC
Confidence 5667 8888875210 035799999999999999764333 34567778775 2322 2221 23453344 322
Q ss_pred ChhhHHHHHHHHHcC-CeEEecCCeeeCCCcccc-------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccC
Q 042288 362 RATDASMIEKLLEKG-DLVICPEGTTCREPFLLR-------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGM 429 (515)
Q Consensus 362 ~~~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~-------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~ 429 (515)
....+..+.+.|++| .+.+.|..+...++...+ +.+|. ...++||+|+.+....
T Consensus 168 ~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~-------------- 233 (298)
T PRK07920 168 ERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEG-------------- 233 (298)
T ss_pred CchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeC--------------
Confidence 234678899999999 899999998764444334 44552 4578999999986531
Q ss_pred CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcC
Q 042288 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 430 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~ 478 (515)
.. ++|++.||++.. ..++..+.++++.+.+++...
T Consensus 234 ---------~~-y~v~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir 268 (298)
T PRK07920 234 ---------DG-WGFRVHPPLDVP----SAEDVAAMTQALADAFAANIA 268 (298)
T ss_pred ---------Ce-EEEEEeCCCCCC----chhHHHHHHHHHHHHHHHHHH
Confidence 11 678888998754 134556666666666666543
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0003 Score=64.96 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=46.1
Q ss_pred CcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH--HH---HHH
Q 042288 117 LHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--AG---ALM 187 (515)
Q Consensus 117 ~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~---~l~ 187 (515)
.+|.+.+.++ .+.|+|.+...+++...++ +|+. .+++++- + +..| .+ .+.
T Consensus 91 ~~~g~~~~L~---~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~-~----------------~~~KP~p~~f~~~~ 149 (175)
T TIGR01493 91 PWPDSAAALA---RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDT-V----------------RAYKPDPVVYELVF 149 (175)
T ss_pred CCCchHHHHH---HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhh-c----------------CCCCCCHHHHHHHH
Confidence 6788888887 3667899999999999997 8864 3444331 1 1112 12 222
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHH
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFL 211 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL 211 (515)
+.++.. ...++.+|||..|+.--
T Consensus 150 ~~~~~~-p~~~l~vgD~~~Di~~A 172 (175)
T TIGR01493 150 DTVGLP-PDRVLMVAAHQWDLIGA 172 (175)
T ss_pred HHHCCC-HHHeEeEecChhhHHHH
Confidence 233331 24478899999998643
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.1e-05 Score=82.34 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=69.7
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| .++|+|+..+..++.++++ +|++ +++ ++ ..++|.+.++++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-~~~-----------------~~-~p~~K~~~v~~l 462 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-VRA-----------------EV-LPDDKAALIKEL 462 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-EEc-----------------cC-ChHHHHHHHHHH
Confidence 4556776554 677899 6678999999999999998 9996 221 12 456799988887
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
..+ ...+.++||+.||.|+++.|+.+++++...
T Consensus 463 ~~~--~~~v~~VGDg~nD~~al~~A~vgia~g~g~ 495 (562)
T TIGR01511 463 QEK--GRVVAMVGDGINDAPALAQADVGIAIGAGT 495 (562)
T ss_pred HHc--CCEEEEEeCCCccHHHHhhCCEEEEeCCcC
Confidence 654 456788999999999999999999888543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0016 Score=61.69 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=50.0
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC----CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|++.+ .++++| ..+|+|.++...++.+...+.+ +|.++++.-. + .+.-+.+..+.
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-----------~----~~KP~p~~~~~ 149 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDL-----------G----MRKPEARIYQH 149 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEeccc-----------C----CCCCCHHHHHH
Confidence 5676666 556789 6678999988777655433123 3555554311 1 11112333333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhccccce
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.+...+ ...++.+|||..|+.--+.+|-..
T Consensus 150 ~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 150 VLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 332221 234788999999988777777644
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00089 Score=67.31 Aligned_cols=93 Identities=15% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccH--HHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALMKM 189 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~~~ 189 (515)
.++|.+.+ .++++| ...|+|++....++.+.+. ++.+.... .+.+ +++.. .+..| .+.+...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~-~~~~----v~~~~------~~~~KP~p~~~~~a 211 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQ-GLDV----FAGDD------VPKKKPDPDIYNLA 211 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccC-ceEE----Eeccc------cCCCCCCHHHHHHH
Confidence 35666665 456789 6788999999988888776 43211110 0110 11111 12223 2233332
Q ss_pred hcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 190 LGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 190 ~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+...+ ...++.+|||.+|+..-+.+|-.++.
T Consensus 212 ~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~ 244 (286)
T PLN02779 212 AETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIV 244 (286)
T ss_pred HHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence 22211 23478899999999999999977654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00012 Score=84.49 Aligned_cols=90 Identities=21% Similarity=0.243 Sum_probs=70.8
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| .++++|+..+..++.++++ +|++++++. + ..++|.+.++++
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~-----------------~-~p~~K~~~i~~l 708 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAG-----------------V-LPDGKAEAIKRL 708 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeC-----------------C-CHHHHHHHHHHH
Confidence 4456666555 667899 5677999999999999998 999865541 2 355799999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
... ...++++||+.||.|+|+.|+.+++.+...
T Consensus 709 ~~~--~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 709 QSQ--GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred hhc--CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 543 345788999999999999999999998644
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00011 Score=68.80 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=62.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--Cc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~ 197 (515)
+++.++++| .++|+|+.+...+++++++ +|+++++. + ++.|...++.++...+. ..
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---------------g-----~~~k~~~l~~~~~~~gl~~~e 114 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---------------G-----QSNKLIAFSDLLEKLAIAPEQ 114 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---------------C-----CCcHHHHHHHHHHHhCCCHHH
Confidence 455666789 5678999999999999998 99876532 1 12477777777665332 34
Q ss_pred eEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
++++|||.+|+++++.++.+++++...
T Consensus 115 v~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 115 VAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCChh
Confidence 788999999999999999999886533
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00042 Score=65.22 Aligned_cols=183 Identities=17% Similarity=0.164 Sum_probs=106.1
Q ss_pred EEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhc---cc-CcccHHHHHHH-HHHHcCCCHHHHHHHH
Q 042288 31 VVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLY---YY-VSESAGIRVLI-FATFAGMKVPSIESVA 105 (515)
Q Consensus 31 avFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~l-~~~~~~~~~~~-~~~~~G~~~~~l~~~~ 105 (515)
.+||++|-+...|-.+...... +.+++ +.+..+..+ -.++.+ +- +.....++-.. ...-.|.+.++++++.
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~-~pngr--rfF~~~Sey-DD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~s 78 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAV-FPNGR--RFFSNLSEY-DDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRIS 78 (315)
T ss_pred ccccCCCCCccchhHHHHHHHH-cCCHH--HHHHhhhhh-hhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHH
Confidence 6899999999987766555433 22222 222221122 111111 10 11111233221 2345799999999888
Q ss_pred HHHhchhhcCCCcHHHHHHHHhCC---CEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEeC-----c-e--------
Q 042288 106 RAVLPKFYSGDLHPETWRVFSSCG---RRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVYK-----G-R-------- 166 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~G---~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~~-----G-~-------- 166 (515)
+.-+. +-|.+-+.++..+ ..+|+|.|...+++.+|.. +|+ .++-||++..++ + +
T Consensus 79 E~sa~------lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~ 151 (315)
T COG4030 79 ELSAK------LVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGVPRGELHGTEVDLDSIAVPEEEREELLSIID 151 (315)
T ss_pred Hhhcc------cCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCCCccccccccccCccccCChHHHHHHHHhcC
Confidence 77544 4466777666544 3488999999999999997 998 478899887652 1 1
Q ss_pred ----eeeE------------E---------ecCCccccccHHHHHHHHhcCCCCCce-EEEeCCcCcHHHHhccc----c
Q 042288 167 ----STGF------------V---------KSPGVLVGKNKAGALMKMLGDDEEMPD-IGLGDRKTDSLFLNLCK----E 216 (515)
Q Consensus 167 ----~tG~------------i---------~~~~~~~g~~K~~~l~~~~~~~~~~~~-~aygDS~~DlpmL~~a~----~ 216 (515)
+.|. + ++-...-|.+|++-++.....++...+ ...|||.+|..||+.+. .
T Consensus 152 ~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGgl 231 (315)
T COG4030 152 VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGL 231 (315)
T ss_pred ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCce
Confidence 0111 0 010111344566666666555433333 66799999999999763 4
Q ss_pred ceeeCCCC
Q 042288 217 SYMVPPNP 224 (515)
Q Consensus 217 ~~~Vnp~~ 224 (515)
+++.|-+.
T Consensus 232 AvaFNGNe 239 (315)
T COG4030 232 AVAFNGNE 239 (315)
T ss_pred EEEecCCc
Confidence 45555444
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0037 Score=60.06 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=53.7
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+.+ .++ +| .+.|+|.+....++...++ +|+ |.+++++-. + + ..-+.+.+..
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~-----------~--~--~KP~p~~~~~ 158 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQV-----------G--V--AKPDVAIFDY 158 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECcc-----------C--C--CCCCHHHHHH
Confidence 4555554 555 57 5678999998888888887 886 444443310 0 0 1112223333
Q ss_pred HhcCCC---CCceEEEeCCc-CcHHHHhccccc-eeeCC
Q 042288 189 MLGDDE---EMPDIGLGDRK-TDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 189 ~~~~~~---~~~~~aygDS~-~DlpmL~~a~~~-~~Vnp 222 (515)
.+...+ ...++.+|||. +|+..=+.+|-. +.++.
T Consensus 159 ~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 159 ALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred HHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 322221 23478899998 799999998876 45554
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00062 Score=61.40 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=47.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhc-C--CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFL-G--ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~l-G--id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
.++++.++++| ...|+|++....++.+.+. + + ++.+++.+ .+ .+.-+.+.+...+...+
T Consensus 70 ~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~l~~~f~~i~~~~---------------~~-~~Kp~~~~~~~~~~~~~ 132 (154)
T TIGR01549 70 ADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-HLGDYFDLILGSD---------------EF-GAKPEPEIFLAALESLG 132 (154)
T ss_pred HHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-HHHhcCcEEEecC---------------CC-CCCcCHHHHHHHHHHcC
Confidence 45566777889 5678999999999888886 4 1 22233221 11 11112333433333211
Q ss_pred C-CceEEEeCCcCcHHHHhccc
Q 042288 195 E-MPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 195 ~-~~~~aygDS~~DlpmL~~a~ 215 (515)
. ..++.+|||.+|+..-+.+|
T Consensus 133 ~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 133 LPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCEEEEeCCHHHHHHHHHcc
Confidence 1 25788999999988766553
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00014 Score=67.13 Aligned_cols=90 Identities=16% Similarity=0.116 Sum_probs=66.2
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--Cc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~ 197 (515)
++..++++| ...|+|+.....++.+++. +|+.+++... . .|.+.++.++...+. ..
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-------------k-------pkp~~~~~~~~~l~~~~~e 100 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-------------K-------KKTEPYAQMLEEMNISDAE 100 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-------------C-------CCHHHHHHHHHHcCcCHHH
Confidence 455677789 5678999999999999998 9997555310 1 244555555444222 34
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
++++|||.+|++|++.++.++++. ..+.++..|.
T Consensus 101 v~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~ 135 (169)
T TIGR02726 101 VCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAA 135 (169)
T ss_pred EEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCC
Confidence 788999999999999999999985 5667777765
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00021 Score=79.68 Aligned_cols=95 Identities=21% Similarity=0.288 Sum_probs=77.1
Q ss_pred hcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 113 YSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 113 ~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
+.+.+++++.+ .||++| +++++||=.+.-++.+|++ ||||++.+- + ..++|++.+++
T Consensus 534 ~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ae-----------------l-lPedK~~~V~~ 594 (713)
T COG2217 534 LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAE-----------------L-LPEDKAEIVRE 594 (713)
T ss_pred EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhecc-----------------C-CcHHHHHHHHH
Confidence 45677777665 677899 7677999999999999999 999977762 3 57889999999
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
+-.+ .......||+.||-|-|..|+-+++++-......
T Consensus 595 l~~~--g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~ 632 (713)
T COG2217 595 LQAE--GRKVAMVGDGINDAPALAAADVGIAMGSGTDVAI 632 (713)
T ss_pred HHhc--CCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHH
Confidence 8754 3456778999999999999999999987444443
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0018 Score=62.31 Aligned_cols=93 Identities=24% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCcHHHHHHHHhCC-C--EEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH-HHHH
Q 042288 116 DLHPETWRVFSSCG-R--RCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA-GALM 187 (515)
Q Consensus 116 ~~~~~~~~~l~~~G-~--~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~-~~l~ 187 (515)
..++++++.+++.+ + .+|+|=+.....+...++ +|+ |.++.+.-. | ...|. .+. +.+.
T Consensus 99 ~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~-------g-~~KP~-----~~~f~~~~ 164 (229)
T COG1011 99 PDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDV-------G-VAKPD-----PEIFEYAL 164 (229)
T ss_pred ccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEeccc-------c-cCCCC-----cHHHHHHH
Confidence 46788998888644 4 577999888888888888 885 555554421 1 11111 111 1233
Q ss_pred HHhcCCCCCceEEEeCC-cCcHHHHhcccc-ceeeCCC
Q 042288 188 KMLGDDEEMPDIGLGDR-KTDSLFLNLCKE-SYMVPPN 223 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS-~~DlpmL~~a~~-~~~Vnp~ 223 (515)
+.++.. ...++.+||| .||+.--+.+|- .+.+|..
T Consensus 165 ~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 165 EKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred HHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence 334431 2447889999 577444444443 4455543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00026 Score=78.81 Aligned_cols=97 Identities=11% Similarity=0.136 Sum_probs=76.1
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .+|+.| +++++||-...-++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v~A-----------------~~-~PedK~~iV~~l 503 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFLA-----------------EA-TPEDKLALIRQE 503 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEEEc-----------------cC-CHHHHHHHHHHH
Confidence 4456666555 677899 6777999999999999999 99987544 24 688999999997
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.+ .......||+.||-|.|+.|+-+++.+......+-|.
T Consensus 504 Q~~--G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA 543 (679)
T PRK01122 504 QAE--GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAG 543 (679)
T ss_pred HHc--CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 654 3445567999999999999999999995545555444
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0016 Score=76.74 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=54.5
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-----EEEeceEEEeCceeeeEEecCCccccccH--HHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGA 185 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~ 185 (515)
.+|.+.+ +++++| ..+|+|.+....++...+. +|++ .+++.+- .+..| .+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~-----------------~~~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADA-----------------FENLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcc-----------------cccCCCCHHH
Confidence 4566555 667899 6788999999999999887 8863 3333221 11112 233
Q ss_pred HHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 186 LMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 186 l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+...+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 333222211 3447889999999999999887544
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00016 Score=79.12 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=68.8
Q ss_pred cCCCcHHHHH---HHHhCCC-E-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCGR-R-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G~-~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++|++.+ .++++|. . +|+|+.++..++.++++ +|++++++ .+ ..++|.+.+++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~-----------------~~-~p~~K~~~i~~ 420 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHA-----------------EL-LPEDKLEIVKE 420 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhh-----------------cc-CcHHHHHHHHH
Confidence 3446666555 6778896 4 67999999999999998 99986543 12 45679998888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+..+ ...+.++||+.||.|+++.|+.++.+..
T Consensus 421 l~~~--~~~v~~vGDg~nD~~al~~A~vgia~g~ 452 (536)
T TIGR01512 421 LREK--YGPVAMVGDGINDAPALAAADVGIAMGA 452 (536)
T ss_pred HHhc--CCEEEEEeCCHHHHHHHHhCCEEEEeCC
Confidence 7554 4567889999999999999999999873
|
. |
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0016 Score=65.78 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=107.3
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC-ccEEEec--ccchhhhhhc----CCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP-IPAVTYS--LSRLSELISP----IKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~-~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~ 365 (515)
+++++|.|++...-+ .++|+|+++-|...+|..........+ +..+.+. .|.+-+++.. .|.-.+++.. ..
T Consensus 106 ~~~v~g~e~l~e~l~-~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~np~ld~~i~~~R~r~~~~~~~~~~-~~ 183 (308)
T COG1560 106 RVEVEGLEHLEEALA-NGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPKNPLLDWLITRGRERFGGRLLPRKG-EG 183 (308)
T ss_pred eeeecCHHHHHHHHH-cCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCCCHHHHHHHHHHHHhcCCcccCCCc-hh
Confidence 688999999752111 457999999999999998876654333 3566665 6776665542 3333444433 56
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCCc-ccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREPF-LLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~~-l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
++.+.+.|++| .+++-|+=..+.+.. -.||= +|. ...+++|+|+......
T Consensus 184 ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~----------------- 246 (308)
T COG1560 184 IRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNP----------------- 246 (308)
T ss_pred HHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeC-----------------
Confidence 88899999999 889999988886655 34441 221 3468999999877631
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
++..+++++.||..-. ...|.++.++++-+.|++......
T Consensus 247 -----~g~~y~l~i~p~~~~~----~~~D~~~~a~~mn~~~E~~I~~~P 286 (308)
T COG1560 247 -----DGSGYTLHIHPPMTDD----PSEDVEADAQRMNDFVEKWIRAHP 286 (308)
T ss_pred -----CCCeEEEEEeccccCC----CCCCHHHHHHHHHHHHHHHHHcCh
Confidence 1234889999876544 256666766666666665443333
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00048 Score=75.80 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=68.9
Q ss_pred cCCCcHHHHH---HHHhCC-CE-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RR-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++|++.+ .++++| .. +|+|+.+...++.++++ +|++++++. + ..++|.+.+++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~-----------------~-~p~~K~~~v~~ 442 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAE-----------------L-LPEDKLAIVKE 442 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeecc-----------------C-CHHHHHHHHHH
Confidence 3456776655 666788 64 67999999999999998 999865541 2 45679888888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+... ...+.++||+.||.|+++.|+-+++++.
T Consensus 443 l~~~--~~~v~~vGDg~nD~~al~~A~vgia~g~ 474 (556)
T TIGR01525 443 LQEE--GGVVAMVGDGINDAPALAAADVGIAMGA 474 (556)
T ss_pred HHHc--CCEEEEEECChhHHHHHhhCCEeEEeCC
Confidence 7654 3467889999999999999998888874
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0007 Score=75.37 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=75.2
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .+|+.| +++++||-...-++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A-----------------~~-~PedK~~iV~~l 499 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVA-----------------EC-KPEDKINVIREE 499 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEc-----------------CC-CHHHHHHHHHHH
Confidence 4456776655 677899 6777999999999999999 99987554 24 678999999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.+ .......||+.||-|-|+.|+-+++++......+-|.
T Consensus 500 Q~~--G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA 539 (673)
T PRK14010 500 QAK--GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAA 539 (673)
T ss_pred HhC--CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhC
Confidence 654 3334456999999999999999999995444554444
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0025 Score=62.13 Aligned_cols=82 Identities=15% Similarity=0.044 Sum_probs=54.6
Q ss_pred HHHHHHHHhCC-CEEEEec----CcHHHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 119 PETWRVFSSCG-RRCVLTA----NPRIMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSa----S~~~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.+.++.|+++| .+++||+ ..+..++.+.+. +|+ +..+- + .++|.. . ....|...+++
T Consensus 120 ~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~--v-----il~gd~----~-~K~~K~~~l~~--- 183 (237)
T PRK11009 120 RQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNP--V-----IFAGDK----P-GQYTKTQWLKK--- 183 (237)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCccccee--E-----EEcCCC----C-CCCCHHHHHHh---
Confidence 34555677899 5677998 467889999987 898 64331 1 122211 1 23457665542
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.||||.+|+..-+.||-..+
T Consensus 184 ---~~i~I~IGDs~~Di~aA~~AGi~~I 208 (237)
T PRK11009 184 ---KNIRIFYGDSDNDITAAREAGARGI 208 (237)
T ss_pred ---cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence 2347889999999999888887754
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.015 Score=56.68 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=21.7
Q ss_pred CceEEEeCC-cCcHHHHhccccc-eeeCCCC
Q 042288 196 MPDIGLGDR-KTDSLFLNLCKES-YMVPPNP 224 (515)
Q Consensus 196 ~~~~aygDS-~~DlpmL~~a~~~-~~Vnp~~ 224 (515)
..++.+||| ..|+.-=+.+|-. +.|++..
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~ 211 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPEN 211 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence 347889999 5999998888854 4466643
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0051 Score=60.44 Aligned_cols=48 Identities=21% Similarity=0.183 Sum_probs=34.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCC-CCC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPP-NPK 225 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~ 225 (515)
.+.+|-.+++-+....+ ...+++.|||-||++||..+..+++|.+ +++
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 46678888777665432 2347889999999999999999999964 455
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0013 Score=75.91 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=74.2
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEe-Cceeee-----EEecCCccccccH
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVY-KGRSTG-----FVKSPGVLVGKNK 182 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~-~G~~tG-----~i~~~~~~~g~~K 182 (515)
..+++ +++.++++| +++++||-...-++.+|++ +|++ .+.|.+++.- +..+.. .+-. .+ .-++|
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~-~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDANDFLLGADIEELSDEELARELRKYHIFA-RL-TPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-EC-CHHHH
Confidence 34554 445677899 6677999999999999999 9995 2333333211 111110 1111 13 56889
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.+-++.+-.. .+.....||+.||.|.|+.|+-+++++......+-|.
T Consensus 592 ~~iV~~lq~~--G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 592 SRIIGLLKKA--GHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred HHHHHHHHhC--CCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 9988887544 3445667999999999999999999995444544443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00031 Score=69.58 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=44.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++|+|||.||++||+.|+.++++ |.++++++.|.
T Consensus 187 ~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 187 GGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 577899999988765433 2379999999999999999999998 56778888763
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=57.02 Aligned_cols=94 Identities=17% Similarity=0.118 Sum_probs=57.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCce
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD 198 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~ 198 (515)
+.++.++++| ..+++|+|+...++.+.+. +|+.+.+..-+.-+ ....| .|+ .+-=..+.++ ++- ....|
T Consensus 93 ~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~-dv~~~---KP~---Pd~yL~Aa~~-Lgv-~P~~C 162 (221)
T COG0637 93 ELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTAD-DVARG---KPA---PDIYLLAAER-LGV-DPEEC 162 (221)
T ss_pred HHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHH-HHhcC---CCC---CHHHHHHHHH-cCC-ChHHe
Confidence 4555777888 5677899999999999988 88643333221110 00111 111 1111223333 222 13558
Q ss_pred EEEeCCcCcHHHHhccccceeeCCC
Q 042288 199 IGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
+++-||.+.+.--+.||-.++.-++
T Consensus 163 vviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 163 VVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEEecchhHHHHHHHCCCEEEEecC
Confidence 9999999999999999988876554
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00032 Score=69.59 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=44.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|..+|+.++...+. ..++|+|||.||++||+.|++++++ |..+++++.|.
T Consensus 193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 249 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ 249 (270)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence 577899999988765433 2479999999999999999999999 56777888776
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.012 Score=55.88 Aligned_cols=22 Identities=9% Similarity=-0.194 Sum_probs=17.6
Q ss_pred ceEEEeCCcCcHHHHhccccce
Q 042288 197 PDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 197 ~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.++.+||+..|+..=+.+|-..
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEE
Confidence 3677899999999888777654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0065 Score=61.26 Aligned_cols=163 Identities=13% Similarity=0.151 Sum_probs=104.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhh----hcCCeeEEecCCh
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELI----SPIKTVRLTRDRA 363 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~----~~~~~i~idR~~~ 363 (515)
..+++++|.|++...- ..++|+|+++-|...+|....... ...++..+.+. .+.+-.++ ...|.-.+++++.
T Consensus 102 ~~~~~~~g~e~l~~a~-~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 180 (295)
T PF03279_consen 102 KKRVEIEGEEHLEAAL-AEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQKNPYIDRLLNKLRERFGIELIPKGEG 180 (295)
T ss_pred ceEEEEECHHHHHHHH-hcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCCccHhHHHHHHHHHHhcCCeEecchhh
Confidence 3478899998875111 146799999999999998654332 33455555554 34444333 2345555665533
Q ss_pred hhHHHHHHHHHcC-CeEEecCCeeeCC-Cccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCC
Q 042288 364 TDASMIEKLLEKG-DLVICPEGTTCRE-PFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMD 430 (515)
Q Consensus 364 ~~~~~~~~~l~~G-~l~IFPEGTrs~~-~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~ 430 (515)
+..+.+.|++| .+++.+....... +.-.+| ..|. ...++||+||.......
T Consensus 181 --~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~-------------- 244 (295)
T PF03279_consen 181 --IRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD-------------- 244 (295)
T ss_pred --HHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC--------------
Confidence 77888999999 8889888755433 333344 3341 45789999999876421
Q ss_pred ccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 431 PFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 431 ~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.||++... .++.+++++.+-+.+++.......
T Consensus 245 --------~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~lE~~Ir~~P~ 284 (295)
T PF03279_consen 245 --------GSHYRIEIEPPLDFPS----SEDIEELTQRYNDRLEEWIREHPE 284 (295)
T ss_pred --------CCEEEEEEeecccCCc----cchHHHHHHHHHHHHHHHHHcChH
Confidence 1137888889987762 446677777777777765544443
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.00051 Score=68.02 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.5
Q ss_pred ccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|..+|+.++...+.. .++|+|||.||++||+.|+++|++ |.++.++.+|.
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 6778988888876643332 479999999999999999999998 56677877775
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0079 Score=67.26 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=78.6
Q ss_pred hcCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 113 YSGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 113 ~~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
+.+..+|++- +.|++.| +++++||-.+.-++.+|++ +|+|.|+|.- ..++|.+.+|+
T Consensus 720 l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VGi~~V~aev------------------~P~~K~~~Ik~ 780 (951)
T KOG0207|consen 720 LEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VGIDNVYAEV------------------LPEQKAEKIKE 780 (951)
T ss_pred eccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hCcceEEecc------------------CchhhHHHHHH
Confidence 3556676654 5788999 6778999999999999999 9999888732 45678888888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
+..+ .....-.||+.||-|=|..|+-.++++....++.-|.
T Consensus 781 lq~~--~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaA 821 (951)
T KOG0207|consen 781 IQKN--GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAA 821 (951)
T ss_pred HHhc--CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhC
Confidence 8765 3556678999999999999999999998865655444
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0045 Score=54.39 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=24.8
Q ss_pred HHHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcC
Q 042288 119 PETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLG 151 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lG 151 (515)
.++++.++++| ..+|+|++ ...++..+.+. +|
T Consensus 35 ~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~ 68 (128)
T TIGR01681 35 RDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FE 68 (128)
T ss_pred HHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-cc
Confidence 35566777889 56789999 88888888886 66
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0018 Score=62.03 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=56.7
Q ss_pred EecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHH
Q 042288 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFL 211 (515)
Q Consensus 134 vSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL 211 (515)
++......++.+.+. .|+..+.+ +.. -.+.. .|..|...++..+...+.. ..+++|||.||++||
T Consensus 113 ~~~~~~~~~~~~l~~-~~~~~~~~-------~~~-~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 113 REGKDVDEVREIIKE-RGLNLVDS-------GFA-IHIMK----KGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF 179 (215)
T ss_pred cCCccHHHHHHHHHh-CCeEEEec-------Cce-EEEec----CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 455555566666676 66553221 111 12221 4667888888876643322 378999999999999
Q ss_pred hccccceee-CCCCCCCcccc
Q 042288 212 NLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 212 ~~a~~~~~V-np~~~l~~~A~ 231 (515)
+.++.++++ |..++++++|.
T Consensus 180 ~~ag~~vam~na~~~~k~~A~ 200 (215)
T TIGR01487 180 RVVGFKVAVANADDQLKEIAD 200 (215)
T ss_pred HhCCCeEEcCCccHHHHHhCC
Confidence 999999998 56777887775
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0031 Score=62.44 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=41.7
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad 252 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARAD 252 (272)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCC
Confidence 466799888888765432 2479999999999999999999988 55666765554
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.00051 Score=68.35 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=44.3
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++|+|||.||++||+.|+.++++ |..+++++.|.
T Consensus 185 ~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~ 241 (272)
T PRK15126 185 VGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELP 241 (272)
T ss_pred CCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCC
Confidence 567899999988766433 2479999999999999999999998 56777887765
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0046 Score=70.28 Aligned_cols=88 Identities=17% Similarity=0.264 Sum_probs=68.4
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.+++++.+ .+++.| .++++||.....++.++++ +|++. .+ ++ ..++|.+.++++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~-~~-----------------~~-~p~~K~~~v~~l 625 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDF-RA-----------------GL-LPEDKVKAVTEL 625 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCe-ec-----------------CC-CHHHHHHHHHHH
Confidence 4566776665 667899 6678999999999999998 99972 11 13 466899999887
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
-. .+.+...||+.||.|+|+.|+-++++....
T Consensus 626 ~~---~~~v~mvGDgiNDapAl~~A~vgia~g~~~ 657 (741)
T PRK11033 626 NQ---HAPLAMVGDGINDAPAMKAASIGIAMGSGT 657 (741)
T ss_pred hc---CCCEEEEECCHHhHHHHHhCCeeEEecCCC
Confidence 53 245677899999999999999999987443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0031 Score=60.62 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=57.2
Q ss_pred EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHH
Q 042288 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSL 209 (515)
Q Consensus 132 vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~Dlp 209 (515)
.+.+......++.+.++ ++.+.... ..+ ..-.+.. .+..|...|+..+...+. ..++++|||.||++
T Consensus 111 ~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~-~~~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~ 179 (225)
T TIGR01482 111 KMRYGIDVDTVREIIKE-LGLNLVAV-----DSG-FDIHILP----QGVNKGVAVKKLKEKLGIKPGETLVCGDSENDID 179 (225)
T ss_pred EEeecCCHHHHHHHHHh-cCceEEEe-----cCC-cEEEEee----CCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHH
Confidence 34333344456667776 77542111 111 1223332 456788888877654322 34789999999999
Q ss_pred HHhccccceee-CCCCCCCcccc
Q 042288 210 FLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 210 mL~~a~~~~~V-np~~~l~~~A~ 231 (515)
||+.++.++++ |.+++++..|.
T Consensus 180 m~~~ag~~vam~Na~~~~k~~A~ 202 (225)
T TIGR01482 180 LFEVPGFGVAVANAQPELKEWAD 202 (225)
T ss_pred HHHhcCceEEcCChhHHHHHhcC
Confidence 99999999998 56777887775
|
catalyze the same reaction as SPP. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0039 Score=55.74 Aligned_cols=90 Identities=20% Similarity=0.208 Sum_probs=67.1
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc--
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP-- 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~-- 197 (515)
+++.+.+.| .+.|+||=....|+.=++. ||+++++= --.+|..++++++.+.+..+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q--------------------G~~dK~~a~~~L~~~~~l~~e~ 101 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ--------------------GISDKLAAFEELLKKLNLDPEE 101 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee--------------------chHhHHHHHHHHHHHhCCCHHH
Confidence 455666778 7789999999999999998 99986431 11358888777766533322
Q ss_pred eEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
+.+.||..+|+|+++.++-++++.. ++.++..|.
T Consensus 102 ~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~ 136 (170)
T COG1778 102 VAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRAD 136 (170)
T ss_pred hhhhcCccccHHHHHHcCCcccccccCHHHHHhhH
Confidence 4556999999999999999999964 666666554
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.00066 Score=65.73 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=42.1
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
.+..|...++.++...+ ...++++|||.||++||+.+++++++. ..+.++++|.
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 45578888888764322 245799999999999999999999995 4667888776
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0047 Score=71.98 Aligned_cols=105 Identities=18% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeee------------------EEec
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTG------------------FVKS 173 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG------------------~i~~ 173 (515)
..+++ +++.++++| +++++||-....+..+|++ +|+.. .+-.+.+-.++| .+-.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~---~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~a 612 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS---PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFS 612 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC---CCccccceeeeHHHHhhCCHHHHHHhhhcCeEEE
Confidence 34554 455777899 6778999998999999998 99841 000000001111 1111
Q ss_pred CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 174 PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
.+ ..++|.+.++.+- .. .+.+.+.||+.||.|||+.|+.+++++......+
T Consensus 613 -r~-~P~~K~~iV~~lq-~~-g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak 663 (917)
T TIGR01116 613 -RV-EPSHKSELVELLQ-EQ-GEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663 (917)
T ss_pred -ec-CHHHHHHHHHHHH-hc-CCeEEEecCCcchHHHHHhCCeeEECCCCcHHHH
Confidence 12 4567877777553 32 2344558999999999999999999974434433
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.013 Score=68.13 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=67.0
Q ss_pred CCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-----EEeceEEEeCc-eee-----eEEecCCccccc
Q 042288 116 DLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-----VIGTEICVYKG-RST-----GFVKSPGVLVGK 180 (515)
Q Consensus 116 ~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-----vigt~l~~~~G-~~t-----G~i~~~~~~~g~ 180 (515)
.+++++. +.++++| +++++||-...-++.+|++ +|++. +-|.+++--++ .+. -.+-. .+ ..+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~-~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RA-SPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-EC-CHH
Confidence 4565554 4677899 6778999999999999999 99852 11222211000 000 01111 12 567
Q ss_pred cHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+|.+.++.+-.. .+.....||+.||.|+|+.|+-+++.+
T Consensus 605 ~K~~iv~~lq~~--g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 605 HKMKIVKALQKR--GDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHC--CCEEEEECCCcccHHHHHhCCeeEecC
Confidence 898888876543 344666899999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0058 Score=70.94 Aligned_cols=112 Identities=18% Similarity=0.151 Sum_probs=73.0
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--E-EEeceEEEe-Cceeee-----EEecCCcccccc
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--M-VIGTEICVY-KGRSTG-----FVKSPGVLVGKN 181 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~-vigt~l~~~-~G~~tG-----~i~~~~~~~g~~ 181 (515)
+.+++++. +.++++| +++++||-...-++.+|++ +|++ . +-|.+++.- +..+.. .+-. .+ .-++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~-sPe~ 625 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KL-TPLQ 625 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-Ee-CHHH
Confidence 34555544 5677899 6677999999999999999 9995 1 223333210 000000 0111 13 5678
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 182 KAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 182 K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
|.+-++.+-.. .+.....||+.||.|.|+.|+-+++++-.....+-|.
T Consensus 626 K~~iV~~Lq~~--G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (903)
T PRK15122 626 KSRVLKALQAN--GHTVGFLGDGINDAPALRDADVGISVDSGADIAKESA 673 (903)
T ss_pred HHHHHHHHHhC--CCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhc
Confidence 99998887654 3445557999999999999999999984444444333
|
|
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.025 Score=56.95 Aligned_cols=157 Identities=11% Similarity=0.152 Sum_probs=92.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHH-HhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLS-TALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~-~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~ 364 (515)
-+++++|.|++... .++|+|+++-|...+|..... +....++..+.+. .|.+-.++. ..|.-.+.. +..
T Consensus 98 ~~v~~~g~e~l~~~---~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~-~~~ 173 (290)
T PRK06628 98 RRIEIIGIENIKKL---EGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKANNPYVNKLVNESRAGDKLRLIPK-GPE 173 (290)
T ss_pred CeEEEeCHHHHHHh---cCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHhcCCceecC-CCc
Confidence 36788998887521 367999999999999987643 3232356666665 566655543 234334431 223
Q ss_pred hHHHHHHHHHcC-CeEEecCCeeeCCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
.+..+.+.|++| .+.+.|.=.. .++...+| -+|. ...++||+|+.+.....
T Consensus 174 ~~r~l~k~Lk~g~~v~il~Dq~~-~~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~~---------------- 236 (290)
T PRK06628 174 GSRALVRAIKESESIVMLVDQKM-NDGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTKG---------------- 236 (290)
T ss_pred hHHHHHHHHHcCCeEEEEecccC-CCCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECCC----------------
Confidence 477888999999 7888865442 12223344 2331 45689999998765310
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHH
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~ 476 (515)
+ .+++++.||++.....+..++..+.++.+-+.+++.
T Consensus 237 ------~-~~~i~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~ 273 (290)
T PRK06628 237 ------S-YFKVIVHPQLKFEQTGDNKADCYNIMLNINQMLGEW 273 (290)
T ss_pred ------C-eEEEEEcCCCCCCCCCChhhhHHHHHHHHHHHHHHH
Confidence 1 267888888865422111233334444444444443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0068 Score=70.33 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=70.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEe-Cceeee-----EEecCCccccccHHHHHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVY-KGRSTG-----FVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~-~G~~tG-----~i~~~~~~~g~~K~~~l~~~ 189 (515)
++++.+++.| +++++||-...-++.+|++ +|++ -+-|.+++.- +..+.. .+-. .+ ..++|.+.++.+
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~-sPe~K~~IV~~L 633 (902)
T PRK10517 557 PALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RL-TPMHKERIVTLL 633 (902)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-Ec-CHHHHHHHHHHH
Confidence 3445677899 6677999999999999999 9995 2223333210 000000 0111 13 567899999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.. .+.....||+.||.|.|+.|+-+++++-.....+-|.
T Consensus 634 q~~--G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 634 KRE--GHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred HHC--CCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 554 3445557999999999999999999984334444333
|
|
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.015 Score=59.04 Aligned_cols=160 Identities=9% Similarity=0.080 Sum_probs=94.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEec--ccchhhhhhc----CCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYS--LSRLSELISP----IKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~ 364 (515)
-+++++|.|++...- ..++|+|+++-|.+.+|........ ..++..+.+. .+.+..++.. .|.-.+.. +..
T Consensus 115 ~~~~~~g~e~l~~a~-a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~-~~~ 192 (308)
T PRK06553 115 GRVEVRGIEIFERLR-DDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPPNNPYAARKVLEARRTTMGGLVPS-GAG 192 (308)
T ss_pred CeeEecCHHHHHHHH-hcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHHHHcCCCcccC-CCh
Confidence 467788887764110 0367999999999999998654333 3466777775 5666555432 23223321 223
Q ss_pred hHHHHHHHHHcC-CeEEecCCeeeCCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
.+..+.+.|++| .+.+.|.-.-+ ++.-.+| -+|. ...++||+|+.+....
T Consensus 193 ~~r~l~r~Lk~g~~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~----------------- 254 (308)
T PRK06553 193 AAFALAGVLERGGHVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP----------------- 254 (308)
T ss_pred HHHHHHHHHHcCCeEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC-----------------
Confidence 477888999999 88888654432 2333344 2331 4568999999875531
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
.+. ++|++.||++.....+...+.++.++++-+.+++..
T Consensus 255 -----~g~-y~i~~~~~~~~~~~~~~~~d~~~~t~~~n~~lE~~I 293 (308)
T PRK06553 255 -----GGR-FRLELTERVELPRDADGQIDVQATMQALTDVVEGWV 293 (308)
T ss_pred -----CCe-EEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHH
Confidence 122 788888998754211112344455555555555443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0017 Score=64.66 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=36.6
Q ss_pred ccccHHHHHHHHhcCCCC-----CceEEEeCCcCcHHHHhccccceeeC
Q 042288 178 VGKNKAGALMKMLGDDEE-----MPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~-----~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.|..|..+|+.++...+. ..++|+|||.||++||+.|+.+|+++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 567899988887664333 34799999999999999999999996
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0078 Score=68.65 Aligned_cols=108 Identities=13% Similarity=0.022 Sum_probs=71.6
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EE-eceEEEeCce----eee----------EEecC
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VI-GTEICVYKGR----STG----------FVKSP 174 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vi-gt~l~~~~G~----~tG----------~i~~~ 174 (515)
+..+|++. +.+++.| +++++||-...-++.+|++ +|++. ++ +.++. +|. ++. .+-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~vfA- 516 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLL--KGDNRDDLPSGELGEMVEDADGFA- 516 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhc--CCcchhhCCHHHHHHHHHhCCEEE-
Confidence 34555544 5677899 6677999999999999999 99963 22 11111 110 000 0111
Q ss_pred CccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcc
Q 042288 175 GVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPV 229 (515)
Q Consensus 175 ~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 229 (515)
.+ ..++|.+.++++-.. .+.....||+.||.|-|+.|+-+++++-.....+-
T Consensus 517 r~-~Pe~K~~iV~~lq~~--G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAke 568 (755)
T TIGR01647 517 EV-FPEHKYEIVEILQKR--GHLVGMTGDGVNDAPALKKADVGIAVAGATDAARS 568 (755)
T ss_pred ec-CHHHHHHHHHHHHhc--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHH
Confidence 13 567899999887543 34455579999999999999999999843334433
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0087 Score=70.01 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=71.5
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEE-eceEEEe-Cceee-----eEEecCCccccc
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVI-GTEICVY-KGRST-----GFVKSPGVLVGK 180 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vi-gt~l~~~-~G~~t-----G~i~~~~~~~g~ 180 (515)
.++++ +++.++++| +++++||-...-++.+|++ +|+. .++ |.+++.- +..+. -.+-. .+ ..+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~-sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RS-SPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-EC-CHH
Confidence 44544 455777899 6677999999999999999 9984 111 2222100 00000 01111 13 678
Q ss_pred cHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
+|.+-++.+-.. .+.....||+.||.|+|+.|+-+++++ -.....+-|
T Consensus 656 ~K~~iV~~lq~~--g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~a 704 (941)
T TIGR01517 656 DKQLLVLMLKDM--GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEA 704 (941)
T ss_pred HHHHHHHHHHHC--CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHh
Confidence 899988887554 345666899999999999999999997 333444333
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0015 Score=71.54 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=44.9
Q ss_pred ccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+.. .++|+|||.||++||+.|+.+|++ |.++++++.|.
T Consensus 504 ~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad 560 (580)
T PLN02887 504 PGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVAD 560 (580)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCC
Confidence 5668999999887764332 479999999999999999999998 56778888776
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0092 Score=64.68 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=37.7
Q ss_pred hhhcCCeeEEecCChhh----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEc
Q 042288 349 LISPIKTVRLTRDRATD----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSN 413 (515)
Q Consensus 349 ~~~~~~~i~idR~~~~~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~ 413 (515)
++...|.+.|+++.-.. ++.+.+.|++| +++| +.|-.....-.+|..-+.+.++|+.=+.+..
T Consensus 389 l~~~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~~~~R~~~i~lAk~~gv~v~~i~~~~ 456 (526)
T TIGR01663 389 FFQPAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPDAASRAKFLQCARAAGIPCRCFLFNA 456 (526)
T ss_pred HHHHcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCCHHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 34445778887765433 45677789999 8877 4444333333444444456778877555544
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.006 Score=71.84 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=69.4
Q ss_pred CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEE-eCceeeeEEec--------------
Q 042288 115 GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICV-YKGRSTGFVKS-------------- 173 (515)
Q Consensus 115 ~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~-~~G~~tG~i~~-------------- 173 (515)
+.++++ +++.++++| +++++||-...-+..+|++ +|+. ..+.+.-+. ++..+||....
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 344554 555777899 6778999999999999999 9983 222111110 01233442110
Q ss_pred ---CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 174 ---PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 174 ---~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
..+ ..++|.+.++.+-.. ...+.+.||+.||.|+|+.|+-+++++
T Consensus 724 ~V~ar~-sP~~K~~iV~~lq~~--g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 724 LVIARC-APQTKVKMIEALHRR--KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred eEEEec-CHHHHHHHHHHHHhc--CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 123 567898888877544 345667899999999999999999985
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.042 Score=55.45 Aligned_cols=160 Identities=11% Similarity=0.107 Sum_probs=99.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHH--hcCCCccEEEec--ccchhhhhhc----CCeeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLST--ALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~--~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~ 364 (515)
+++++|.+++... .++|+|+++=|.+.+|...... ....++..+.+. .|.+-.++.. .|.-.+.+ ..
T Consensus 94 ~~~~~g~~~~~~~---~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~--~~ 168 (293)
T PRK06946 94 LVQVDSAIDLTDP---DGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTPMSNPLLDAIAKAARGRFGAEMVSR--AD 168 (293)
T ss_pred eEEEECHHHHHhc---CCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeCCCCHHHHHHHHHHHHhcCCCccCC--Cc
Confidence 6788888776521 4679999999999999987542 223456667775 5666555432 34444522 33
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.++.+.+.|++| .+.+-|.=..+ .++...+| -+|. ...++||+|+.+.-...
T Consensus 169 ~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~~--------------- 233 (293)
T PRK06946 169 SARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLPD--------------- 233 (293)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeCC---------------
Confidence 477889999999 77777665433 33344455 2231 45689999997654210
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
+..+++++.||++.. +..+.++.++.+-+.+++.......+
T Consensus 234 -------~~~~~~~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir~~PeQ 274 (293)
T PRK06946 234 -------YKGYRLRVFKPWENY----PTGDDDLDARRMNAFLEEQIRLMPEQ 274 (293)
T ss_pred -------CCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcHh
Confidence 112667788888764 24556666666666666655444433
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.018 Score=49.95 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=58.9
Q ss_pred HHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc
Q 042288 120 ETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP 197 (515)
Q Consensus 120 ~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~ 197 (515)
+.++.+++.=+++|.||--.-.+..+|+. .|++ ++.+ + . ..+.|.+-++++-+. .+.
T Consensus 37 e~iqeL~d~V~i~IASgDr~gsl~~lae~-~gi~~~rv~a---------------~--a-~~e~K~~ii~eLkk~--~~k 95 (152)
T COG4087 37 ETIQELHDMVDIYIASGDRKGSLVQLAEF-VGIPVERVFA---------------G--A-DPEMKAKIIRELKKR--YEK 95 (152)
T ss_pred HHHHHHHHhheEEEecCCcchHHHHHHHH-cCCceeeeec---------------c--c-CHHHHHHHHHHhcCC--CcE
Confidence 34444444436677899888889999997 8875 2222 1 1 456788888876543 456
Q ss_pred eEEEeCCcCcHHHHhccccceeeC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+++.||+.||.++|+.|+.++++=
T Consensus 96 ~vmVGnGaND~laLr~ADlGI~ti 119 (152)
T COG4087 96 VVMVGNGANDILALREADLGICTI 119 (152)
T ss_pred EEEecCCcchHHHhhhcccceEEe
Confidence 899999999999999999999864
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=54.51 Aligned_cols=84 Identities=20% Similarity=0.273 Sum_probs=48.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHH------------HHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRI------------MVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNKA 183 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~------------~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K~ 183 (515)
.++++.++++| ..+|+|..+.. .++.+.+. +|++. ++++. ++ .+ ..-+.
T Consensus 48 ~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~~~ii~~~----~~---------~~--~KP~p 111 (166)
T TIGR01664 48 PAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPIQVLAATH----AG---------LY--RKPMT 111 (166)
T ss_pred HHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCEEEEEecC----CC---------CC--CCCcc
Confidence 45677788899 56778887653 46778887 88752 22221 00 01 11112
Q ss_pred HHHHHHhcCCC----CCceEEEeCCc--------CcHHHHhccccce
Q 042288 184 GALMKMLGDDE----EMPDIGLGDRK--------TDSLFLNLCKESY 218 (515)
Q Consensus 184 ~~l~~~~~~~~----~~~~~aygDS~--------~DlpmL~~a~~~~ 218 (515)
+.++..+...+ ...++.+||+. +|+..-+.+|-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 112 GMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred HHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 23333322211 24478899986 5888877777654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.003 Score=58.59 Aligned_cols=92 Identities=10% Similarity=0.057 Sum_probs=49.9
Q ss_pred HHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcCCcEEEeceEEE---eCceeeeEEecCCccccccHHH-HHHHHhcCC
Q 042288 120 ETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLGADMVIGTEICV---YKGRSTGFVKSPGVLVGKNKAG-ALMKMLGDD 193 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lGid~vigt~l~~---~~G~~tG~i~~~~~~~g~~K~~-~l~~~~~~~ 193 (515)
++++.++++| .+.|+|.+ ...+++.+.+. +|++.. |.+... -+..+++.- .+..|.. .+.+.+++.
T Consensus 52 elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~-~~~~~~~~~Fd~iv~~~~------~~~~kp~~~i~~~~~~~ 123 (174)
T TIGR01685 52 DVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYA-GKTVPMHSLFDDRIEIYK------PNKAKQLEMILQKVNKV 123 (174)
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCC-CCcccHHHhceeeeeccC------CchHHHHHHHHHHhhhc
Confidence 4556777899 56789988 88899999887 886410 100000 011222111 1112222 222222211
Q ss_pred -----CCCceEEEeCCcCcHHHHhcccccee
Q 042288 194 -----EEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 194 -----~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
....++++|||..|+.--..++-.++
T Consensus 124 ~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 124 DPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred ccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 12347889999999877666665543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0018 Score=62.51 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=42.9
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++||+.++.++++ |.++++++.|.
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~ 210 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAAD 210 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcc
Confidence 455788888887665332 2479999999999999999999999 67777887665
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0023 Score=63.00 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=43.4
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++||+.++.++++ |+++.+++.|.
T Consensus 185 ~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~ 241 (256)
T TIGR00099 185 KGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALAD 241 (256)
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCC
Confidence 566799999988765432 3479999999999999999999998 66777776665
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0049 Score=60.79 Aligned_cols=52 Identities=23% Similarity=0.315 Sum_probs=36.9
Q ss_pred ccccHHHHHHHHhcCCC----CCceEEEeCCcCcHHHHhccccceeeCCC----CCCCcc
Q 042288 178 VGKNKAGALMKMLGDDE----EMPDIGLGDRKTDSLFLNLCKESYMVPPN----PKVDPV 229 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~----~~~~~aygDS~~DlpmL~~a~~~~~Vnp~----~~l~~~ 229 (515)
.+..|..+++.++...+ ....+|+|||.||++||+.++.+++++.. ++++..
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~ 232 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPG 232 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCcc
Confidence 34456666555543322 23479999999999999999999998543 357665
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0051 Score=59.06 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=33.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.|..|...++..+...+ ...++++|||.||++||+.|+.+++|.
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~~ 221 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVIK 221 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEeC
Confidence 45567777777655432 234799999999999999999999973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0062 Score=58.97 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=33.8
Q ss_pred cccHHHHHHHHhcCCC----CCceEEEeCCcCcHHHHhccccceeeC
Q 042288 179 GKNKAGALMKMLGDDE----EMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~----~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+..|..+++.++...+ ...++|+|||.||++||+.|+.+|+|.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 5578888877754432 124799999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.078 Score=53.89 Aligned_cols=162 Identities=15% Similarity=0.149 Sum_probs=100.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|...+.++ .
T Consensus 108 ~~v~i~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 183 (309)
T PRK06860 108 RWTEVEGLEHIREVQ-AQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRPNDNPLYDWLQTWGRLRSNKSMLDRK---D 183 (309)
T ss_pred CeEEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHHhhcCCcCcCcc---c
Confidence 367888988764110 14679999999999999976543333356666665 555554443 2343444332 3
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccccc--------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRF--------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
+..+.+.|++| .+++-|.-.-. .++...+| -+|. ...++||+|+.+.-...
T Consensus 184 ~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~~--------------- 248 (309)
T PRK06860 184 LKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKPD--------------- 248 (309)
T ss_pred HHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeCC---------------
Confidence 67788899999 77777554432 22233333 3331 45689999999865321
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
+..++|++.||++.. ...+..+.++.+.+.+++.......+
T Consensus 249 -------~~~~~i~~~~~~~~~----~~~d~~~~t~~~n~~lE~~Ir~~PeQ 289 (309)
T PRK06860 249 -------GKGYELIILPPEDSP----PLDDAEATAAWMNKVVEKCILMAPEQ 289 (309)
T ss_pred -------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCchH
Confidence 113778888888754 24666777777777777765544444
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.011 Score=62.12 Aligned_cols=117 Identities=12% Similarity=0.144 Sum_probs=89.3
Q ss_pred HcCCCHHHHHHHHHHHhch-----------------hhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC
Q 042288 93 FAGMKVPSIESVARAVLPK-----------------FYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG 151 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG 151 (515)
-.|.-.+++++.+++.... ++++.+.|...| ++|+-| +++.+||-...-+..++.+ -|
T Consensus 407 ~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AG 485 (681)
T COG2216 407 RGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AG 485 (681)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hC
Confidence 3477888999988877531 133445555555 577899 7788999999999999999 99
Q ss_pred CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 152 ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 152 id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
+|+.++ .| ..|.|.+.+++...+ .....-.||+.||-|-|..|+..++.|-..+-++-|
T Consensus 486 VDdfiA-----------------ea-tPEdK~~~I~~eQ~~--grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEA 544 (681)
T COG2216 486 VDDFIA-----------------EA-TPEDKLALIRQEQAE--GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEA 544 (681)
T ss_pred chhhhh-----------------cC-ChHHHHHHHHHHHhc--CcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHh
Confidence 997666 26 788999999987665 233444699999999999999999999766544433
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0045 Score=60.18 Aligned_cols=54 Identities=17% Similarity=0.076 Sum_probs=43.1
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.++...+. ..++++|||.||++||+.++.++++ |.+++++++|.
T Consensus 156 ~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 156 LRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 466788888877654322 2478999999999999999999999 56778888776
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.077 Score=52.61 Aligned_cols=74 Identities=16% Similarity=0.039 Sum_probs=42.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHH---HHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVE---AFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~---~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~ 195 (515)
++++.++++| .+++||+......+ ...+. +|++.+.-..+..++ .+..|..+.+..... .
T Consensus 125 e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~-------------~~~~K~~rr~~I~~~--y 188 (266)
T TIGR01533 125 DFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKK-------------DKSSKESRRQKVQKD--Y 188 (266)
T ss_pred HHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCC-------------CCCCcHHHHHHHHhc--C
Confidence 4445566889 66779997644433 55566 787532111121111 122466666655443 4
Q ss_pred CceEEEeCCcCcHH
Q 042288 196 MPDIGLGDRKTDSL 209 (515)
Q Consensus 196 ~~~~aygDS~~Dlp 209 (515)
.....+||..+|+.
T Consensus 189 ~Ivl~vGD~~~Df~ 202 (266)
T TIGR01533 189 EIVLLFGDNLLDFD 202 (266)
T ss_pred CEEEEECCCHHHhh
Confidence 45677899999985
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.1 Score=52.90 Aligned_cols=163 Identities=13% Similarity=0.111 Sum_probs=98.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|++...- ..++|+|+++=|...++..........+...+.+. .+.+-.++. ..|.-.+.++ .
T Consensus 102 ~~v~i~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~l~~~~R~~~g~~~i~~~---~ 177 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQ-KQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRPHNNPLFDWIQTRGRLRSNKAMIDRK---D 177 (303)
T ss_pred CcEEEECHHHHHHHH-hcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHHhcCCcccCcc---c
Confidence 467888988764110 14679999999999999986443332355556554 455544432 2232334332 2
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCcccc--------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLR--------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~--------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
...+.+.|++| .+.|-+.-.-+ .++...+ +-.|. ...++||+|+.+.-...
T Consensus 178 ~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~~--------------- 242 (303)
T TIGR02207 178 LRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNED--------------- 242 (303)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeCC---------------
Confidence 67788999999 77777653322 1222333 33452 45689999999865311
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSF 484 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~ 484 (515)
+..++|++.||++.. .+.+..+.++.+-+.+++.......++
T Consensus 243 -------~~~~~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P~QW 284 (303)
T TIGR02207 243 -------GSGYRLKIDPPLDDF----PGDDEIAAAARMNKIVEKMIMRAPEQY 284 (303)
T ss_pred -------CCeEEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHH
Confidence 113778888888653 245666777777677776655444443
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.034 Score=65.44 Aligned_cols=112 Identities=14% Similarity=0.035 Sum_probs=69.0
Q ss_pred CCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-E-E-----EeceEEE-------eC---ceeeeEEec
Q 042288 115 GDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-M-V-----IGTEICV-------YK---GRSTGFVKS 173 (515)
Q Consensus 115 ~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~-v-----igt~l~~-------~~---G~~tG~i~~ 173 (515)
+..++++ ++.++++| +++++||=...-+..++++ +|+- . - +..++.. .+ -.+||.-..
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 3455554 55677899 6677999999999999999 9971 0 0 0000000 00 122322110
Q ss_pred -------------------CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC-CCCCCccc
Q 042288 174 -------------------PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVS 230 (515)
Q Consensus 174 -------------------~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A 230 (515)
..+ .-++|.+-++.+-.. .+.+.+.||+.||.|||+.|+.+++++- .....+-|
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~-sPeqK~~IV~~lq~~--g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~a 719 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFART-SPQQKLIIVEGCQRQ--GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEEC-CHHHHHHHHHHHHHC--CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHh
Confidence 011 456788877776443 3456678999999999999999999863 33333433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.032 Score=60.66 Aligned_cols=83 Identities=19% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHh
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~ 190 (515)
+.+++++. +.++++| .++++||-...-+..++++ +|+. ..+ ..++|.+.++++.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi~--------------------~~~-~p~~K~~~v~~l~ 403 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGIF--------------------ARV-TPEEKAALVEALQ 403 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCce--------------------ecc-CHHHHHHHHHHHH
Confidence 45666554 4677889 6677999999999999998 8860 123 6788999998875
Q ss_pred cCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 191 GDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 191 ~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.. .......||+.||.|+|+.|+-.++++
T Consensus 404 ~~--g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 404 KK--GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HC--CCEEEEECCChhhHHHHHhCCCccccc
Confidence 44 345677899999999999999999887
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.0057 Score=64.69 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=41.5
Q ss_pred ccccHHHHHHHHhcCC---C--CCceEEEeCCcCcHHHHhccc-cceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDD---E--EMPDIGLGDRKTDSLFLNLCK-ESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~---~--~~~~~aygDS~~DlpmL~~a~-~~~~V-np~~~l~~~A 230 (515)
.|..|..+|+.++... + ...++|+|||.||++||+.++ .+|++ |.++++++.|
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a 231 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY 231 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence 5667888888776543 2 234799999999999999999 79998 5777788654
|
|
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.13 Score=52.33 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=98.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhhh----cCCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~ 364 (515)
-+++++|.|.+...- ..++|+|+++=|...++....... .+.++..+.+. .+.+-.++. ..|.-.+. ...
T Consensus 113 ~~~~~~g~e~l~~a~-~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~--~~~ 189 (314)
T PRK08943 113 RRVEWHGLEILEEAR-ANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQRNPLFDWLWNRVRRRFGGRLHA--RED 189 (314)
T ss_pred CeEEEECHHHHHHHH-hCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCCCCHHHHHHHHHHHhhcCCeeec--Cch
Confidence 367888988764110 146799999999999997654433 23566777775 455555443 23333343 234
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.+..+.+.|++| .+++-|.-..+ +++...+|- +|. ...++||+|+.+.-.. .
T Consensus 190 ~~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~---~------------ 254 (314)
T PRK08943 190 GIKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNG---K------------ 254 (314)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeC---C------------
Confidence 477889999999 78888665543 333344542 231 4568999999874321 0
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..++|++.||++.. ...+..+.++++-+.+++......
T Consensus 255 -------~~~~~i~~~~~~~~~----~~~d~~~~t~~~~~~lE~~Ir~~P 293 (314)
T PRK08943 255 -------THRLDIEIRPPMDDL----LSADDETIARRMNEEVEQFVGPHP 293 (314)
T ss_pred -------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112778888888653 135566666666666666544333
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.084 Score=51.37 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=83.7
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Cce
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGR 166 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~ 166 (515)
=.|++.+++++.+++.-- ....-..++++.+++++ -+.|.||+...+++.+.++ .|. -+|+++.+.++ +|.
T Consensus 72 ~~~l~k~~i~~~V~~s~i--~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~ 148 (246)
T PF05822_consen 72 EQGLTKSEIEEAVKESDI--MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGV 148 (246)
T ss_dssp HHT-BGGGHHHHHHCS-----B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSB
T ss_pred hcCcCHHHHHHHHHhcch--hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcce
Confidence 457889999988886522 12234467888899999 5677899999999999998 674 37999999995 788
Q ss_pred eeeEEecCCccccccHHH-HH--HHHhcCCC-CCceEEEeCCcCcHHHHhcc---ccceeeCC-----CCCCCcccccCC
Q 042288 167 STGFVKSPGVLVGKNKAG-AL--MKMLGDDE-EMPDIGLGDRKTDSLFLNLC---KESYMVPP-----NPKVDPVSQDKL 234 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~-~l--~~~~~~~~-~~~~~aygDS~~DlpmL~~a---~~~~~Vnp-----~~~l~~~A~~~~ 234 (515)
++|.-. +-. +--.|-+ .+ ..+..... .....-.|||.+|+-|-.-+ ++.+-|.. +..|.++ ..
T Consensus 149 l~gF~~-~lI-H~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y---~~ 223 (246)
T PF05822_consen 149 LVGFKG-PLI-HTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKY---LE 223 (246)
T ss_dssp EEEE-S-S----TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHH---HC
T ss_pred EeecCC-Cce-EEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHH---Hh
Confidence 887432 211 2222333 22 12222211 23467789999999998766 33333322 2224433 44
Q ss_pred CCceE-EccCc
Q 042288 235 PKPIV-FHDGR 244 (515)
Q Consensus 235 ~W~i~-f~~~r 244 (515)
.|-|| -+|+-
T Consensus 224 ~yDIVlv~D~t 234 (246)
T PF05822_consen 224 AYDIVLVDDQT 234 (246)
T ss_dssp CSSEEEET--B
T ss_pred cCCEEEECCCC
Confidence 78887 56553
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.18 Score=51.05 Aligned_cols=159 Identities=16% Similarity=0.165 Sum_probs=97.6
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhhhc----CCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~ 365 (515)
+++++|.|++...- ..++|+|+++=|...+|....... ...++..+.+. .+.+-.++.. .|.-.+. ....
T Consensus 105 ~~~i~g~e~l~~~~-~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~--~~~~ 181 (305)
T TIGR02208 105 RVNLMGLEHIEAAQ-AAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNHKNPLFDWLWNRVRSRFGGHVYA--REAG 181 (305)
T ss_pred ceEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCCCCHHHHHHHHHHHhcCCCceec--Chhh
Confidence 67888988764110 146799999999999997754433 33566777775 5555554432 3333343 2345
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
+..+.+.|++| .+.+-+.=..+ +++-..+|- +|. ...++||+|+...-.. .
T Consensus 182 ~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~---~------------- 245 (305)
T TIGR02208 182 IKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQ---V------------- 245 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEEC---C-------------
Confidence 77889999999 77777655433 334444552 221 4568999999875421 0
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYE 480 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~ 480 (515)
+..++|++.||++.. ...+..+.++.+-+.+++.....
T Consensus 246 ------~~~~~i~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir~~ 283 (305)
T TIGR02208 246 ------TGKFELTVRPAMATE----LSVDPEQEARAMNKEVEQFILPY 283 (305)
T ss_pred ------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 112677888887653 24566677777666666654433
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.018 Score=52.48 Aligned_cols=87 Identities=11% Similarity=0.033 Sum_probs=50.5
Q ss_pred hcCCCcHHHHHHHHhCC-CEEEEecCcH----HHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 113 YSGDLHPETWRVFSSCG-RRCVLTANPR----IMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 113 ~~~~~~~~~~~~l~~~G-~~vivSaS~~----~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
|.+.+..+.++.|+++| .++.+||-.. -..+-+++- +.++.... + .|+|--.. . ..-.|..+|+
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~p----v---~f~Gdk~k--~-~qy~Kt~~i~ 182 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNP----V---IFAGDKPK--P-GQYTKTQWIQ 182 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhh-cccCCCcc----e---eeccCCCC--c-ccccccHHHH
Confidence 44446667888999999 5556877533 333445554 44432221 1 23332221 1 3345766665
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhcccc
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
+ +...+.||||.+|+---+.||-
T Consensus 183 ~------~~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 183 D------KNIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred h------cCceEEecCCchhhhHHHhcCc
Confidence 4 3456789999999987776653
|
|
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.24 Score=49.82 Aligned_cols=161 Identities=17% Similarity=0.091 Sum_probs=95.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~~ 366 (515)
.++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+..++.. .|.-.+. .....+
T Consensus 84 ~~~~~g~e~l~~a~-~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~~~n~~~~~~~~~~R~~~g~~~i~-~~~~~~ 161 (289)
T PRK08905 84 VKDDHGWEHVEAAL-AEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRPPRKAALRPLMEAGRARGNMRTAP-ATPQGV 161 (289)
T ss_pred eeeecCHHHHHHHH-hcCCCEEEEecccchHHHHHHHHHhcCCceEEEECCCCHHHHHHHHHHhcccCCceec-cCCccH
Confidence 35778877653110 14679999999999999975433222566777775 4566554432 2322232 122347
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.+-+--..+ .++...+| -.|. ...++||+|+.+.-...
T Consensus 162 ~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~----------------- 224 (289)
T PRK08905 162 RMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR----------------- 224 (289)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC-----------------
Confidence 7889999999 77776543322 22233344 3341 45689999999854311
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.||+.+. .++.++.++.+-+.+++.......
T Consensus 225 -----~~~y~~~~~~~~~~~-----~~~~~~~t~~~~~~lE~~Ir~~Pe 263 (289)
T PRK08905 225 -----GRGYRLHLRPVQEPL-----PGDKAADAAVINAEIERLIRRFPT 263 (289)
T ss_pred -----CCcEEEEEecCCCCC-----CCCHHHHHHHHHHHHHHHHHcCcH
Confidence 112677888887653 345666666666666665444443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.017 Score=57.50 Aligned_cols=49 Identities=22% Similarity=0.246 Sum_probs=37.7
Q ss_pred ccccHHHHHHHHhcCCC--C-CceEEEeCCcCcHHHHhccccceee-CCCCCCC
Q 042288 178 VGKNKAGALMKMLGDDE--E-MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVD 227 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~-~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~ 227 (515)
.+ .|...++.+....+ . ..++++|||.||++||+.++.++++ |..+.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 45 67777777654322 3 5578999999999999999999998 5566665
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.017 Score=67.16 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=68.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--E---EE--eceEEEe-CceeeeEEecC----CccccccHHHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--M---VI--GTEICVY-KGRSTGFVKSP----GVLVGKNKAGA 185 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~---vi--gt~l~~~-~G~~tG~i~~~----~~~~g~~K~~~ 185 (515)
+++++.++++| +++++||=...-+..+|++ +|+. . ++ |.++..- |..+.-.+... -+ ..++|.+-
T Consensus 553 ~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv-sP~qK~~I 630 (917)
T COG0474 553 KEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV-SPEQKARI 630 (917)
T ss_pred HHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc-CHHHHHHH
Confidence 45666788999 6778999999999999999 9962 1 12 4443321 11111011100 12 56789998
Q ss_pred HHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 186 LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
++.+-+. .+....-||+.||.|+|+.|+-+++..-
T Consensus 631 V~~lq~~--g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 631 VEALQKS--GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHhC--CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 8887665 3445667999999999999999996553
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.045 Score=51.70 Aligned_cols=79 Identities=18% Similarity=0.296 Sum_probs=51.0
Q ss_pred EEEEecCcHH----HHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH-HHHHHhcCCC-CCceEEEeCC
Q 042288 131 RCVLTANPRI----MVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG-ALMKMLGDDE-EMPDIGLGDR 204 (515)
Q Consensus 131 ~vivSaS~~~----~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~-~l~~~~~~~~-~~~~~aygDS 204 (515)
..|++=|-+. +...+ .+ .|+..+.|++.... .+ +| .|.+|+. .+-+.+...+ ...+++.|||
T Consensus 151 eti~~rs~d~~~~~~~~~L-~e-~glt~v~garf~~v--------~~-as-~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg 218 (274)
T COG3769 151 ETIIWRSSDERMAQFTARL-NE-RGLTFVHGARFWHV--------LD-AS-AGKGQAANWLLETYRRLGGARTTLGLGDG 218 (274)
T ss_pred hheeecccchHHHHHHHHH-Hh-cCceEEeccceEEE--------ec-cc-cCccHHHHHHHHHHHhcCceeEEEecCCC
Confidence 3455555555 44444 43 78998888887542 12 45 5666655 2223333222 2347999999
Q ss_pred cCcHHHHhccccceeeC
Q 042288 205 KTDSLFLNLCKESYMVP 221 (515)
Q Consensus 205 ~~DlpmL~~a~~~~~Vn 221 (515)
.||.|||+..+.++.|.
T Consensus 219 ~nD~Pl~ev~d~AfiV~ 235 (274)
T COG3769 219 PNDAPLLEVMDYAFIVK 235 (274)
T ss_pred CCcccHHHhhhhheeec
Confidence 99999999999999997
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.57 Score=45.18 Aligned_cols=113 Identities=12% Similarity=0.017 Sum_probs=61.2
Q ss_pred HHcCCCHHHHHHHHHHHhchh-----hcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhc---CCcEEEece
Q 042288 92 TFAGMKVPSIESVARAVLPKF-----YSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFL---GADMVIGTE 159 (515)
Q Consensus 92 ~~~G~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~l---Gid~vigt~ 159 (515)
+=.+.....++++--..+.+. ....++|++.+ .++++| ..+|+|.+.....+.+.+. + ++...+.
T Consensus 66 ~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~-- 142 (220)
T TIGR01691 66 MDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFS-- 142 (220)
T ss_pred HHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcc--
Confidence 344555555555444433222 23346776666 455789 5678888887777777664 4 2221111
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHH---HHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+.+... .+ ..-+.+.+. +.++.. ...++.+||+..|+..-+.+|-..+
T Consensus 143 -----~~fd~~-~g-----~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 143 -----GYFDTT-VG-----LKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred -----eEEEeC-cc-----cCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 111100 01 111222333 333321 2447889999999999999988764
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.13 Score=51.96 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=48.9
Q ss_pred ccchhhhhhcCCeeEEecCChhhHHHHHHHHHc---C-CeEEecCCeee-----CCCc--cccccchh----hccCCcEE
Q 042288 343 LSRLSELISPIKTVRLTRDRATDASMIEKLLEK---G-DLVICPEGTTC-----REPF--LLRFSALF----AELTDEVV 407 (515)
Q Consensus 343 ~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~---G-~l~IFPEGTrs-----~~~~--l~~Fk~Gf----~~~~~pVv 407 (515)
+|+++.++.++|.+.++|++- ...|++ | +++|.|-|..- .+.. .++=++|| .+.|+|||
T Consensus 110 ~P~~R~~~~~~G~~~~sr~s~------~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LV 183 (297)
T PF03982_consen 110 IPFFRDFLLWLGAVSASRESI------RYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLV 183 (297)
T ss_pred ccccchhhhhccccccccccc------ceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEE
Confidence 688888888999998887753 334444 5 69999999653 2222 34556787 56799999
Q ss_pred EEEEEcCcc
Q 042288 408 PVAMSNRMS 416 (515)
Q Consensus 408 PV~i~~~~~ 416 (515)
||.--|...
T Consensus 184 Pv~~FGE~d 192 (297)
T PF03982_consen 184 PVYSFGEND 192 (297)
T ss_pred eEEEeCChh
Confidence 999999533
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.39 Score=46.22 Aligned_cols=121 Identities=13% Similarity=0.095 Sum_probs=68.3
Q ss_pred cCCCHHHHHHHHHHHhchhhcC-CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC-----CcE-EEeceEEE
Q 042288 94 AGMKVPSIESVARAVLPKFYSG-DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG-----ADM-VIGTEICV 162 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~-~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG-----id~-vigt~l~~ 162 (515)
--++.+++...-++-..+.+.. ...|.+.+ .++.+| -..++|.|....++--.++ ++ +++ |+|+.-++
T Consensus 69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v 147 (222)
T KOG2914|consen 69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEV 147 (222)
T ss_pred CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccc
Confidence 4567777766555554443222 23344444 556788 6778887765555544443 33 332 33455555
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
.+|+ + .-+.=..+. +.++......++.+.||.+=+..-..|+..++..|+..+
T Consensus 148 ~~gK---------P-~Pdi~l~A~-~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~ 200 (222)
T KOG2914|consen 148 KNGK---------P-DPDIYLKAA-KRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDL 200 (222)
T ss_pred cCCC---------C-CchHHHHHH-HhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCc
Confidence 4441 1 111111122 234442114578899999999999999999998888543
|
|
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.41 Score=48.63 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=93.5
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CC--eeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IK--TVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~--~i~idR~~~~ 364 (515)
+++++|.|++...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++.. .| .+.+. ..
T Consensus 106 ~~~~~g~e~l~~a~-~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~~ 181 (310)
T PRK05646 106 LAHIEGLEHLQQAQ-QEGQGVILMALHFTTLEIGAALLGQQHTIDGMYREHKNPVFDFIQRRGRERHNLDSTAIE---RE 181 (310)
T ss_pred eEEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHhhccCCCccccc---Hh
Confidence 67788888764110 14679999999999999976443332345556655 4655555432 23 23232 23
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.+..+.+.|++| .+.+-+.=..+ .++...+| -+|. ...++||+|+.+.-...
T Consensus 182 ~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~~--------------- 246 (310)
T PRK05646 182 DVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLAD--------------- 246 (310)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeCC---------------
Confidence 467788889999 77777654332 22333454 2331 45689999999865311
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYE 480 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~ 480 (515)
+..++|++.||++.. ...+.++.++++-+.+++.....
T Consensus 247 -------g~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~lE~~Ir~~ 284 (310)
T PRK05646 247 -------GSGYRLVIHPPLEDF----PGESEEADCLRINQWVERVVREC 284 (310)
T ss_pred -------CCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 113778888888653 24555555555555555544333
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.0068 Score=59.52 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=39.7
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhc---cccceeeCCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNL---CKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~---a~~~~~Vnp~~~l~~~A~ 231 (515)
.|..|..+|+.++.. ....+|+|| +.||++||+. +|++|+ |+.+.+..+|+
T Consensus 185 ~gvsKg~al~~L~~~--~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 185 KGWDKTYCLRHLEND--FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred CCCcHHHHHHHHHhh--hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 677899999999876 567899999 8999999994 556655 77666655543
|
|
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.54 Score=47.71 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=96.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~ 366 (515)
.++++|.|++...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|.-.|. +....+
T Consensus 96 ~~~~~g~e~l~~~~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 173 (305)
T PRK08734 96 LRQRHGQELYDAAL-ASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRPPESEAVDGFLQLVRGGDNVRQVR-AEGPAV 173 (305)
T ss_pred eEEecCHHHHHHHH-HcCCCEEEEccccchHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHhccCCCeeec-CCchhH
Confidence 45788888864110 13679999999999999986544333466667665 566655543 23444452 223457
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.+-|.=.-. .++...+| -+|. ...++||+|+.+.-.. .
T Consensus 174 r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~~---~-------------- 236 (305)
T PRK08734 174 RQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERIG---P-------------- 236 (305)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEcC---C--------------
Confidence 8899999999 77777654432 22333344 3341 4568999998875431 0
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..+++.+.||++.. ..++..+.++.+-+.+++...-..
T Consensus 237 -----~~~y~~~~~~~~~~~----~~~~~~~~~~~~n~~lE~~Ir~~P 275 (305)
T PRK08734 237 -----DLEFALHVQPADPAV----ADPDPLRAATALNAGIERIARRDP 275 (305)
T ss_pred -----CCcEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112677887776543 245555666665555555444333
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.45 Score=45.56 Aligned_cols=25 Identities=8% Similarity=-0.117 Sum_probs=20.8
Q ss_pred CceEEEeCCcCcHHHHhccccceee
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
..++.+|||..|+..-+.+|-+.+.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEE
Confidence 4578899999999999988887653
|
|
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.3 Score=49.55 Aligned_cols=159 Identities=14% Similarity=0.088 Sum_probs=95.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~~ 366 (515)
+++++|.|++...- ..++|+|+++-|...+|..........++..+.+. .+.+-.++.. .|.-.+.+ ..+
T Consensus 109 ~v~v~g~e~l~~a~-~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~---~~~ 184 (306)
T PRK08733 109 GVQIEGLEHLQQLQ-QQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRRHRNPVFEWAVKRGRLRYATHMFAN---EDL 184 (306)
T ss_pred cEEEeCHHHHHHHH-hCCCCEEEEecCchHHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHHhhcCCcCcCc---ccH
Confidence 67888987764110 14679999999999999876443333455666665 4555444332 23333432 236
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
+.+.+.|++| .+.+-|.=... +++...+|- +|. ...++||+|+...-.
T Consensus 185 r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~------------------- 245 (306)
T PRK08733 185 RATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRRE------------------- 245 (306)
T ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEEe-------------------
Confidence 7788999999 77777654432 333444552 231 456899999987432
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
++ .+++++.||++.. ...+..+.++++-+.+++.......+
T Consensus 246 ----~~-~y~i~i~~~~~~~----~~~~i~~~t~~~~~~lE~~Ir~~P~Q 286 (306)
T PRK08733 246 ----GG-RYVLKIAPPLADF----PSDDVIADTTRVNAAIEDMVREAPDQ 286 (306)
T ss_pred ----CC-eEEEEEECCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHh
Confidence 11 2677788888643 24566666666666666654444433
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.019 Score=56.28 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=39.9
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhc-cccceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNL-CKESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~-a~~~~~V-np~~~l~~~A 230 (515)
.+..|...++.+....+ ...++++|||.||++||+. ++.+++| |..+++++.+
T Consensus 164 ~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~ 220 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWY 220 (249)
T ss_pred CCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHH
Confidence 45578888877655432 3457999999999999998 7789998 5677777654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.55 Score=47.19 Aligned_cols=159 Identities=12% Similarity=0.130 Sum_probs=94.0
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCe-eEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKT-VRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~-i~idR~~~~~ 365 (515)
+++++|.|++...- ..++|+|+++=|...+|..........+...+.+. .+.+-.++. ..|. ..++ ....
T Consensus 89 ~~~~~~~e~l~~~~-~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~~~~~~R~~~g~~~i~~--~~~~ 165 (289)
T PRK08706 89 LVRYRNKHYLDDAL-AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIG--RTEG 165 (289)
T ss_pred ceEEECHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeCCCCHHHHHHHHHHHhccCCccccc--Chhh
Confidence 47788888764110 14679999999999999877544333456666665 455544432 2232 2223 2335
Q ss_pred HHHHHHHH-HcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLL-EKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l-~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
+..+.+.| ++| .+++.+.=.-. +++-..+| -+|. ...++||+|+.+.-...
T Consensus 166 ~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~~--------------- 230 (289)
T PRK08706 166 LRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREAD--------------- 230 (289)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcCC---------------
Confidence 77888889 466 56666543322 22333344 3331 45789999998865321
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+ .+++++.||++.. .+++.++.++++-+.+++......
T Consensus 231 -------~-~~~i~i~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P 268 (289)
T PRK08706 231 -------N-TVTLHFYPAWDSF----PSEDAQADAQRMNRFIEERVREHP 268 (289)
T ss_pred -------C-cEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1 2677788887653 245666777776666666544333
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.23 Score=45.17 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=59.0
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHH---HHHHhhc---C--Cc--EEEeceEEEeCcee----eeEEecCCccccccHHH
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVE---AFLKDFL---G--AD--MVIGTEICVYKGRS----TGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~---~ia~~~l---G--id--~vigt~l~~~~G~~----tG~i~~~~~~~g~~K~~ 184 (515)
++++.++++|+ ++++||.+...++ ++.+. + | +. .++++ +|.+ ++++.... ..+-|.+
T Consensus 34 ~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~-----~g~~~~~~~~e~i~~~--~~~~K~~ 105 (157)
T smart00775 34 KLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLS-----PDRLFAALHREVISKK--PEVFKIA 105 (157)
T ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEc-----CCcchhhhhcccccCC--HHHHHHH
Confidence 45556777895 5669999988874 66665 2 2 32 33332 3322 23332211 1123555
Q ss_pred HHHHH---hcCCCCCceEEEeCCcCcHHHHhccccc----eeeCCCCCCC
Q 042288 185 ALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKES----YMVPPNPKVD 227 (515)
Q Consensus 185 ~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~----~~Vnp~~~l~ 227 (515)
.|+.. +...+.....+|||..+|....+.++-+ +.|||..+..
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~ 155 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVH 155 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCccc
Confidence 55544 4432233345799999999999998765 5788877654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.55 Score=50.18 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhHHHHHHHHHcC-CeEEe
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDASMIEKLLEKG-DLVIC 381 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~~~~~~~l~~G-~l~IF 381 (515)
.++|+|+++-|...+|..........++..+.+. .|.+-.++. ..|.-.|.. ...+..+.+.|++| .+.+-
T Consensus 138 ~gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp~kNp~ld~li~~~R~r~G~~lI~~--~~giR~liraLk~G~~vgiL 215 (454)
T PRK05906 138 EQEGAILFCGHQANWELPFLYITKRYPGLAFAKPIKNRRLNKKIFSLRESFKGKIVPP--KNGINQALRALHQGEVVGIV 215 (454)
T ss_pred CCCCEEEEeehhhHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHhcCCeeecC--chHHHHHHHHHhcCCEEEEE
Confidence 4679999999999999865533333466677775 566655543 234334433 34578889999999 78888
Q ss_pred cCCeeeCCCccccc-------cchh----hccCCcEEEEEEEc
Q 042288 382 PEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 382 PEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~ 413 (515)
|.-.-..++...+| -+|. ...++||+|+.+.-
T Consensus 216 ~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R 258 (454)
T PRK05906 216 GDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYR 258 (454)
T ss_pred eCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEE
Confidence 76554334444455 2231 45689999988754
|
|
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.54 Score=47.66 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=72.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|.-.++++ .
T Consensus 106 ~~v~~~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 181 (305)
T PRK08025 106 KWFDVEGLDNLKRAQ-MQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNKLMEWVQTRGRMRSNKAMIGRN---N 181 (305)
T ss_pred CeEEEECHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHhccCCcCcCcc---c
Confidence 477888988764110 14679999999999999976543333456667665 455555442 2343344322 2
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccccc--------cchh----hccCCcEEEEEEEc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRF--------SALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~Gf----~~~~~pVvPV~i~~ 413 (515)
+..+.+.|++| .+.+-|.=.-. +++...+| .+|. ...++||+|+.+..
T Consensus 182 ~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R 243 (305)
T PRK08025 182 LRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVR 243 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEE
Confidence 66788999999 77777543322 22233343 3331 44689999998754
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.043 Score=51.83 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=35.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.|..|...++.++...+. ..++++|||.||++|++.++.++++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 467899998888765332 3479999999999999999999875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.16 Score=60.32 Aligned_cols=44 Identities=11% Similarity=-0.034 Sum_probs=33.9
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
..++|.+-++.+-.. .+.....||+.||.|.|+.|+-+++..-.
T Consensus 786 sP~qK~~iV~~lq~~--g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 786 APDQKETLVELLQKL--DYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred CHHHHHHHHHHHHhC--CCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 456777777766443 34456679999999999999999998753
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=2.1 Score=43.11 Aligned_cols=162 Identities=12% Similarity=0.007 Sum_probs=92.0
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~ 366 (515)
.++++|.|++...- ..++|+|+++=|...++..........+...+.+. .+.+-.++. ..|.-.|. .+...+
T Consensus 95 ~~~~~g~e~l~~a~-~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 172 (295)
T PRK05645 95 VREVEGLEVLEQAL-ASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNRVAP-STKEGI 172 (295)
T ss_pred eeEecCHHHHHHHH-hcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHhCCCCCeEee-cCcccH
Confidence 45778877753110 14678999999999999875433222344455544 455544433 23434442 223357
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCcccccc-------ch-h---hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------AL-F---AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~G-f---~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.|-+-=..+ .++...+|- ++ . ...++||+|+.+.-...
T Consensus 173 r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~~~----------------- 235 (295)
T PRK05645 173 LSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPD----------------- 235 (295)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEcCC-----------------
Confidence 7888999999 77777554432 223334442 22 1 34689999998865311
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.++++.. ..++..+.++.+-+.+++.......
T Consensus 236 -----~~~y~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~Pe 275 (295)
T PRK05645 236 -----GSGYKVILEAAPEDM----YSTDVEVSAAAMSKVVERYVRAYPS 275 (295)
T ss_pred -----CCeEEEEEecCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcH
Confidence 112677776665432 2355566666666666655443333
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=92.38 E-value=1.2 Score=50.23 Aligned_cols=102 Identities=15% Similarity=0.058 Sum_probs=62.0
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEecccchhhhhhcCCeeEEecC--C-hhhHHHHHHHHHcC-CeEEecC
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYSLSRLSELISPIKTVRLTRD--R-ATDASMIEKLLEKG-DLVICPE 383 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~~~~~g~~~~~~~~i~idR~--~-~~~~~~~~~~l~~G-~l~IFPE 383 (515)
.++|+|+++-|.+.++........ ..++..+.+..... -...|.-.|..+ . ...+..+.+.|++| .|+|-|-
T Consensus 477 ~~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~~~---R~~~g~~~i~~~~~~~~~~~r~i~~aLk~g~~v~il~D 553 (656)
T PRK15174 477 DQRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPGVL---KGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAID 553 (656)
T ss_pred cCCCEEEEecCcchhhHHHHHHHHcCCCceeeecchHHH---HHhcCCceeccCCCCcchHHHHHHHHHHcCCeEEEEeC
Confidence 367999999999999997654333 23555565544321 123333344322 2 34477899999999 7777755
Q ss_pred CeeeCCCccccc-------cch-h---hccCCcEEEEEEEc
Q 042288 384 GTTCREPFLLRF-------SAL-F---AELTDEVVPVAMSN 413 (515)
Q Consensus 384 GTrs~~~~l~~F-------k~G-f---~~~~~pVvPV~i~~ 413 (515)
-.-..++...+| -.| + ...++||+|+....
T Consensus 554 q~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~ 594 (656)
T PRK15174 554 GALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIW 594 (656)
T ss_pred CCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEE
Confidence 443222222233 444 2 45689999998843
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.37 Score=53.94 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=69.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEE-ec------------C----Ccccccc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFV-KS------------P----GVLVGKN 181 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i-~~------------~----~~~~g~~ 181 (515)
++++.+++.| ++++|||-...-++.||++ +|+- +..-++..--+||+- +. . .| ..+.
T Consensus 591 ~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~---~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~-~P~H 665 (972)
T KOG0202|consen 591 DAIELCRQAGIRVIMITGDNKETAEAIARE-IGIF---SEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA-EPQH 665 (972)
T ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCC---cCCccccccccchhhhhcCCHHHHHHHhhcceEEEec-Cchh
Confidence 4566788899 6667999999999999999 9952 222223333455532 10 0 12 4456
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 182 KAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 182 K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
|.+-++.+-.. ...+.--||+.||-|-|+.|+-.++-.- .....+-|.
T Consensus 666 K~kIVeaLq~~--geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 666 KLKIVEALQSR--GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred HHHHHHHHHhc--CCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 77777765443 3334446999999999999999999873 334554444
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.9 Score=54.09 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=64.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC---c-EEEeceEE-Ee--------------------------Cc-
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA---D-MVIGTEIC-VY--------------------------KG- 165 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi---d-~vigt~l~-~~--------------------------~G- 165 (515)
+++++.++++| +++++||-...-+..+|+. .|+ + .++--+-. .+ +.
T Consensus 637 ~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 715 (1057)
T TIGR01652 637 PETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNV 715 (1057)
T ss_pred HHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCce
Confidence 56777889999 7788999998999999998 885 1 11100000 00 00
Q ss_pred --eeeeEE-----------------------ecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 166 --RSTGFV-----------------------KSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 166 --~~tG~i-----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.++|.. .--.+ ..++|.+-++..-... ...+.+.||+.||.|||+.|+-++.+
T Consensus 716 ~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~-sP~qK~~IV~~lk~~~-~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 716 ALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRV-SPSQKADVVRLVKKST-GKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred EEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCC-CHHHHHHHHHHHHhcC-CCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123321 00012 4466776665543221 24578899999999999999999988
Q ss_pred CCCC
Q 042288 221 PPNP 224 (515)
Q Consensus 221 np~~ 224 (515)
.-..
T Consensus 794 ~g~e 797 (1057)
T TIGR01652 794 SGKE 797 (1057)
T ss_pred cChH
Confidence 6544
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.49 Score=47.02 Aligned_cols=46 Identities=22% Similarity=0.212 Sum_probs=37.1
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcc----ccceeeCCC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLC----KESYMVPPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a----~~~~~Vnp~ 223 (515)
.|..|..+++.++...+ ....+++||+.||.+||+.+ +.+++|...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 56789999998877643 23468899999999999999 889999654
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.86 E-value=1.6 Score=39.86 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=53.6
Q ss_pred HHHHHHHHhCC-CEEEEecC---------------cHHHHHHHHHhhcCCc--EEE-eceEEEeCceeeeEEecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTAN---------------PRIMVEAFLKDFLGAD--MVI-GTEICVYKGRSTGFVKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS---------------~~~~v~~ia~~~lGid--~vi-gt~l~~~~G~~tG~i~~~~~~~g 179 (515)
.++++.++++| .++|+|.. ....++.+.+. +|+. .++ |..... + .+...
T Consensus 35 ~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~ii~~~~~~~------~-----~~~~~ 102 (161)
T TIGR01261 35 IPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGIIFDDVLICPHFPD------D-----NCDCR 102 (161)
T ss_pred HHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCceeEEEECCCCCC------C-----CCCCC
Confidence 46677788899 55778875 45677888887 8864 332 211000 0 01011
Q ss_pred ccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 180 KNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.-|...++..+...+ ...++++|||.+|+..-+.++-..+.
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 223344444443322 23478999999999999988877653
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.24 E-value=4.5 Score=38.61 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHhchhhcCCCcHHHH--HHHHh-CC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceee
Q 042288 97 KVPSIESVARAVLPKFYSGDLHPETW--RVFSS-CG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRST 168 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~l~~-~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~t 168 (515)
+.+|..+.+...++- .. +.|+.. +.|-+ .. +.|+-|-+...=+..+.+. ||+ |.++|-+. .|-.-+
T Consensus 82 d~deY~~~V~~~LPl--q~-LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~--~np~~~ 155 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPL--QD-LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFET--LNPIEK 155 (244)
T ss_pred CHHHHHHHhhccCcH--hh-cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeec--cCCCCC
Confidence 466676666665552 11 444322 22222 22 3788899998888888888 997 44444332 111101
Q ss_pred eEEecCCccccccHH-HHHHHHhcCCCCCceEEEeCCcCcHH
Q 042288 169 GFVKSPGVLVGKNKA-GALMKMLGDDEEMPDIGLGDRKTDSL 209 (515)
Q Consensus 169 G~i~~~~~~~g~~K~-~~l~~~~~~~~~~~~~aygDS~~Dlp 209 (515)
--+ | ....++ +...+.++-.....++++-||.+-+.
T Consensus 156 ~~v----c-KP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~ 192 (244)
T KOG3109|consen 156 TVV----C-KPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQ 192 (244)
T ss_pred cee----e-cCCHHHHHHHHHHhCCCCcCceEEEcCchhhHH
Confidence 112 3 222221 22333344422345789999987543
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=90.22 E-value=2.1 Score=37.13 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=51.4
Q ss_pred HHHHHHHhCC-CEEEEecCc--------HHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHh
Q 042288 120 ETWRVFSSCG-RRCVLTANP--------RIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~--------~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~ 190 (515)
++++.++++| ..+|+|.+. ...++.+.++ +|++.... + +++.... -|.+.++..+
T Consensus 32 ~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~----~----~~~~~~K-------P~~~~~~~~~ 95 (132)
T TIGR01662 32 DALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVL----Y----ACPHCRK-------PKPGMFLEAL 95 (132)
T ss_pred HHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEE----E----ECCCCCC-------CChHHHHHHH
Confidence 4566777789 567799998 7788888888 88752111 1 1110111 1333333333
Q ss_pred cCC---CCCceEEEeC-CcCcHHHHhcccccee
Q 042288 191 GDD---EEMPDIGLGD-RKTDSLFLNLCKESYM 219 (515)
Q Consensus 191 ~~~---~~~~~~aygD-S~~DlpmL~~a~~~~~ 219 (515)
... +...++.+|| +.+|+.+-+.+|-..+
T Consensus 96 ~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i 128 (132)
T TIGR01662 96 KRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFI 128 (132)
T ss_pred HHcCCCChhheEEEcCCCcccHHHHHHCCCeEE
Confidence 322 1234788999 7999999998886654
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.16 Score=46.44 Aligned_cols=17 Identities=35% Similarity=0.624 Sum_probs=13.2
Q ss_pred eEEEEecCCccccCCCc
Q 042288 29 DTVVADVDGTLLRGRSS 45 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~ 45 (515)
++|+||+||||+...|.
T Consensus 1 Kia~fD~DgTLi~~~s~ 17 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSG 17 (159)
T ss_dssp SEEEE-SCTTTEE-STS
T ss_pred CEEEEeCCCCccCCCCC
Confidence 58999999999998763
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=88.87 E-value=3.6 Score=39.85 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=42.6
Q ss_pred HHHHH---HHHhCCC-EEEEecCcHHH---HHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 119 PETWR---VFSSCGR-RCVLTANPRIM---VEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 119 ~~~~~---~l~~~G~-~vivSaS~~~~---v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
|++++ .++++|+ ++++||=.+.. .....+. .|++.. ..|..+.- .......-+-|.++-++...
T Consensus 123 p~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~--~~LiLR~~------~d~~~~~~~yKs~~R~~l~~ 193 (229)
T TIGR01675 123 PEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW--KHLILRGL------EDSNKTVVTYKSEVRKSLME 193 (229)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc--CeeeecCC------CCCCchHhHHHHHHHHHHHh
Confidence 55555 4567894 56699987766 4455555 788732 33433210 00000000116555555544
Q ss_pred CCCCCceEEEeCCcCcH
Q 042288 192 DDEEMPDIGLGDRKTDS 208 (515)
Q Consensus 192 ~~~~~~~~aygDS~~Dl 208 (515)
+ +..+....||..+|+
T Consensus 194 ~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 194 E-GYRIWGNIGDQWSDL 209 (229)
T ss_pred C-CceEEEEECCChHHh
Confidence 3 223345679999998
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=88.08 E-value=2.2 Score=39.31 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=54.6
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| ..+|+|.++. .+++.+.++ +|+ +.++....... | ++++.. .|..+.
T Consensus 32 ~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~~~~~~~~-~--~~~~~~-~~~~~K 106 (176)
T TIGR00213 32 IDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVDLDGIYYCPHHPE-G--VEEFRQ-VCDCRK 106 (176)
T ss_pred HHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCCccEEEECCCCCc-c--cccccC-CCCCCC
Confidence 46777888899 5677888874 344455555 554 44443321111 1 111111 110122
Q ss_pred cHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccce--eeCC
Q 042288 181 NKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESY--MVPP 222 (515)
Q Consensus 181 ~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~--~Vnp 222 (515)
-+.+.+...+...+ ...++.+|||.+|+..=+.++-.. .|+.
T Consensus 107 P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 107 PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEec
Confidence 23444444443322 234788999999999999999875 4553
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=88.02 E-value=6.5 Score=38.72 Aligned_cols=86 Identities=23% Similarity=0.275 Sum_probs=51.5
Q ss_pred cHHHHHHHHhCCCEEE-EecCcHHHHHHHHHhh--cCCcEEEeceEEEeCcee----------------eeEEecCCccc
Q 042288 118 HPETWRVFSSCGRRCV-LTANPRIMVEAFLKDF--LGADMVIGTEICVYKGRS----------------TGFVKSPGVLV 178 (515)
Q Consensus 118 ~~~~~~~l~~~G~~vi-vSaS~~~~v~~ia~~~--lGid~vigt~l~~~~G~~----------------tG~i~~~~~~~ 178 (515)
.|+.++.++++|..++ +|+.+..+.....++. +|+|. ....--+++.+ .|-+- | .
T Consensus 86 ~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~f--s~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf---t-~ 159 (252)
T PF11019_consen 86 VPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDF--SSSSFPEDGIISFPVFDSALSRAPSFYDGILF---T-G 159 (252)
T ss_pred HHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCc--cccccccCcceecccccCCCCCCceeecCeEE---e-C
Confidence 3677788889996555 8998877766665531 57752 11110011111 12221 2 6
Q ss_pred cccHHHHHHHHhcCCCCCc--eEEEeCCcCcHH
Q 042288 179 GKNKAGALMKMLGDDEEMP--DIGLGDRKTDSL 209 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~--~~aygDS~~Dlp 209 (515)
|..|...|..++..-+..+ .++..|+...+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~ 192 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLK 192 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 7789999999988754333 677888876543
|
The function is not known. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=87.46 E-value=1.9 Score=51.72 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=33.3
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
...+|.+-++..-.. ....+.|.||+.||.|||+.|+-++-+.-.+..
T Consensus 855 sP~QKa~IV~~vk~~-~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~ 902 (1178)
T PLN03190 855 APLQKAGIVALVKNR-TSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 902 (1178)
T ss_pred CHHHHHHHHHHHHhc-CCcEEEEECCCcchHHHHHhcCeeeeecCchhH
Confidence 345665554443221 124578999999999999999999988765533
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.19 E-value=4.2 Score=39.53 Aligned_cols=14 Identities=43% Similarity=0.494 Sum_probs=12.6
Q ss_pred CeEEEEecCCcccc
Q 042288 28 KDTVVADVDGTLLR 41 (515)
Q Consensus 28 ~~lavFD~DgTL~~ 41 (515)
-++++||++|||+.
T Consensus 7 iravtfD~~~tLl~ 20 (237)
T KOG3085|consen 7 IRAVTFDAGGTLLA 20 (237)
T ss_pred eEEEEEeCCCceee
Confidence 46999999999997
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.88 E-value=0.88 Score=45.74 Aligned_cols=97 Identities=10% Similarity=-0.002 Sum_probs=59.2
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-----EEeceEEEeCcee-eeEEecCCccccccHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-----VIGTEICVYKGRS-TGFVKSPGVLVGKNKAGA 185 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-----vigt~l~~~~G~~-tG~i~~~~~~~g~~K~~~ 185 (515)
..++.+.+ .++++| ..+++|+.+....+...+. ||++. ++|.+.. ..+ ...-.+. . ..+-+.+.
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~---~~~~~~~~~~k-p-~p~~~~~~ 260 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPD---MHFQREQGDKR-P-DDVVKEEI 260 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcch---hhhcccCCCCC-C-cHHHHHHH
Confidence 35666666 455789 5567999999999999986 77653 2333310 000 0000011 1 23345556
Q ss_pred HHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 186 LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+++.... ....++++||+.+|+.+.+.+|-+++
T Consensus 261 l~~~~~~-~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 261 FWEKIAP-KYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHhcc-CceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 6654221 13557889999999999999998854
|
|
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.58 E-value=1.3 Score=44.21 Aligned_cols=125 Identities=15% Similarity=0.124 Sum_probs=76.4
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC---CccEEEec-ccchhhhhhcCCeeEEe
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR---PIPAVTYS-LSRLSELISPIKTVRLT 359 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~---~~~~v~k~-~~~~g~~~~~~~~i~id 359 (515)
+.+...+|.++...+.+.+| .++++++||||.-..|..++...+.. .+..++.. --..+.++.. .-+.|+
T Consensus 58 ~vf~~el~~~l~~~~~~~~~-----d~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~-~ef~v~ 131 (292)
T COG3176 58 RVFSEELDARLDAAALERIP-----DQDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSA-LEFPVD 131 (292)
T ss_pred hhhhhhcCcccccccccccC-----CCCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCccc-ccccee
Confidence 44445678888888888887 67899999999999999888665532 23444432 1111111111 122333
Q ss_pred c---CChh-h----HHHHHHHHHcC-CeEEecCCeeeC-CCccccccch---h----hccCCcEEEEEEEcC
Q 042288 360 R---DRAT-D----ASMIEKLLEKG-DLVICPEGTTCR-EPFLLRFSAL---F----AELTDEVVPVAMSNR 414 (515)
Q Consensus 360 R---~~~~-~----~~~~~~~l~~G-~l~IFPEGTrs~-~~~l~~Fk~G---f----~~~~~pVvPV~i~~~ 414 (515)
. ..+. . +.-+.+.+++| .+++||-|--.. ..+-..-..| + ...+.++.|+.+++.
T Consensus 132 ~~~~~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r 203 (292)
T COG3176 132 WLEELRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGR 203 (292)
T ss_pred eecccChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccCcccCccccccccchhhcccccchhheecc
Confidence 3 2222 2 33455678899 999999997762 1122233334 2 235789999999973
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=84.99 E-value=4.5 Score=37.31 Aligned_cols=26 Identities=12% Similarity=-0.046 Sum_probs=21.4
Q ss_pred CceEEEeCCcCcHHHHhccccceeeC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
..++.+|||.+|+..-+.+|-..+..
T Consensus 121 ~~~~~VgDs~~Di~~A~~aG~~~i~v 146 (181)
T PRK08942 121 AGSPMVGDSLRDLQAAAAAGVTPVLV 146 (181)
T ss_pred hhEEEEeCCHHHHHHHHHCCCeEEEE
Confidence 44788999999999999999765543
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=84.87 E-value=0.57 Score=41.00 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=13.2
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
|++++||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 578999999999874
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=84.70 E-value=0.52 Score=43.42 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=37.9
Q ss_pred HHHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
+++++.++++| ...++|-+ ...+++.+.+. |+++. ..+..+ ...+...-.++ ..|...+++....-+
T Consensus 51 ~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~---~~~F~~~eI~~-----gsK~~Hf~~i~~~tg 121 (169)
T PF12689_consen 51 PEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPL---IEYFDYLEIYP-----GSKTTHFRRIHRKTG 121 (169)
T ss_dssp HHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C-------------CCECEEEESS-----S-HHHHHHHHHHHH-
T ss_pred HHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccc---hhhcchhheec-----CchHHHHHHHHHhcC
Confidence 45666778899 66778854 34588888887 89871 111111 12233323332 258887776654322
Q ss_pred CC--ceEEEeCCcC
Q 042288 195 EM--PDIGLGDRKT 206 (515)
Q Consensus 195 ~~--~~~aygDS~~ 206 (515)
.. ...++=|-..
T Consensus 122 I~y~eMlFFDDe~~ 135 (169)
T PF12689_consen 122 IPYEEMLFFDDESR 135 (169)
T ss_dssp --GGGEEEEES-HH
T ss_pred CChhHEEEecCchh
Confidence 22 2456666543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.62 E-value=0.63 Score=46.56 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=27.0
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCCcE
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGADM 154 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid~ 154 (515)
++++.++++|. .+|+|++....++...++ +|++.
T Consensus 153 EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~ 187 (301)
T TIGR01684 153 DSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDR 187 (301)
T ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCc
Confidence 44556777894 577999999999999998 99874
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.33 E-value=4 Score=42.24 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=55.3
Q ss_pred HHHHHHHHhCC-CEEEEecC---------------cHHHHHHHHHhhcCCc--EE-EeceEEEeCceeeeEEecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTAN---------------PRIMVEAFLKDFLGAD--MV-IGTEICVYKGRSTGFVKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS---------------~~~~v~~ia~~~lGid--~v-igt~l~~~~G~~tG~i~~~~~~~g 179 (515)
.++++.++++| ..+|+|.. +..++.++.+. +|+. .+ ++.... ...|..+
T Consensus 36 ~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~fd~i~i~~~~~-----------sd~~~~r 103 (354)
T PRK05446 36 IPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIKFDEVLICPHFP-----------EDNCSCR 103 (354)
T ss_pred HHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCceeeEEEeCCcC-----------cccCCCC
Confidence 45666788889 56778884 34556777777 7763 22 221110 0111122
Q ss_pred ccHHHHHHHHhcCC--CCCceEEEeCCcCcHHHHhcccccee-eCCCC
Q 042288 180 KNKAGALMKMLGDD--EEMPDIGLGDRKTDSLFLNLCKESYM-VPPNP 224 (515)
Q Consensus 180 ~~K~~~l~~~~~~~--~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp~~ 224 (515)
.-|...+...+... +...++.+|||.+|+..-+.++-..+ |||+.
T Consensus 104 KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 104 KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC
Confidence 33444555444331 12457889999999999998887654 67643
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=84.24 E-value=5.1 Score=35.69 Aligned_cols=91 Identities=19% Similarity=0.143 Sum_probs=52.3
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| ..+|+|.+.. ..++.+.+. +|+.. .+-+.. .+....+ + ..
T Consensus 33 ~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~------~~~~~~~--~--~K 101 (147)
T TIGR01656 33 VPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPH------HPADNCS--C--RK 101 (147)
T ss_pred HHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCC------CCCCCCC--C--CC
Confidence 35677788899 5577888763 466777787 88751 111100 0000000 1 12
Q ss_pred cHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 181 NKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 181 ~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
-|.+.++..+...+ ...++.+|||..|+..-+.++-..+.
T Consensus 102 P~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~ 143 (147)
T TIGR01656 102 PKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVL 143 (147)
T ss_pred CCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEE
Confidence 24445555544322 23378899999999988888776543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=84.00 E-value=1.4 Score=43.19 Aligned_cols=41 Identities=20% Similarity=0.014 Sum_probs=33.1
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhc-cccceeeC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNL-CKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~-a~~~~~Vn 221 (515)
.|..|..+|+.++ . ...++|+|| +.||++||+. .-..+.|.
T Consensus 186 ~gvnKg~al~~L~-~--~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 186 QGWDKTYCLQFLE-D--FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCCHHHHHHHhc-C--cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 6778999999998 3 577899999 7999999997 44445553
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.22 E-value=2.6 Score=41.12 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=39.0
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhcc--------ccceeeC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLC--------KESYMVP 221 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a--------~~~~~Vn 221 (515)
+.+..|...-++.. .+..|...++..+...+. ...++.||+.+|.+|++.+ +.++.|.
T Consensus 150 ~~v~~g~~~~e~~p----~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 150 LEVMDGKAVVELKP----RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EEEEECCeEEEEee----CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 44444444444443 355788888887765432 3468899999999999988 4566665
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.15 E-value=1 Score=44.75 Aligned_cols=16 Identities=31% Similarity=0.268 Sum_probs=13.8
Q ss_pred CCeEEEEecCCccccC
Q 042288 27 EKDTVVADVDGTLLRG 42 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ 42 (515)
...+++||+||||++.
T Consensus 13 ~~~li~~D~DGTLl~~ 28 (266)
T PRK10187 13 ANYAWFFDLDGTLAEI 28 (266)
T ss_pred CCEEEEEecCCCCCCC
Confidence 3689999999999983
|
|
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.94 E-value=0.0053 Score=60.71 Aligned_cols=174 Identities=14% Similarity=0.055 Sum_probs=99.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh---HHHHHHHH----HcC--
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD---ASMIEKLL----EKG-- 376 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~---~~~~~~~l----~~G-- 376 (515)
++++=.++||.|+.|..+-+.+. -..|++++ ++..|..-.+-+.+.+.|..... +......+ .+-
T Consensus 185 d~t~edc~l~vs~gql~lpm~a~--l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvsd~l~ 262 (412)
T KOG4666|consen 185 DRTGEDCSLHVSYGQLLLPMSAS--LPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVSDKLA 262 (412)
T ss_pred CCchHHHHHHHhhccEecccccc--hHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchhhhhh
Confidence 45677889999999987654432 12444443 56666655566777776654422 11111111 111
Q ss_pred -CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccCCCccCCccccccCC---CCeEEEEEeccccC
Q 042288 377 -DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP---SPAYEVTFLNKLPY 452 (515)
Q Consensus 377 -~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~v~V~~l~pi~~ 452 (515)
-..+|||||++++.-..-|+.+.+-++-|+.|+.|.+...++... ..|....+.+..+.+- -..++|..+=|--.
T Consensus 263 ~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~~i~ 341 (412)
T KOG4666|consen 263 PTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLFPSIE 341 (412)
T ss_pred hhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccchhhh
Confidence 467999999999988888888888899999999999943333211 0111111222222221 12234433322111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 042288 453 ELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491 (515)
Q Consensus 453 ~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~ 491 (515)
++.+++-.+...++-++..=++..+..++-|+..
T Consensus 342 -----q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~~ 375 (412)
T KOG4666|consen 342 -----QKDDPKIYASNFRKFAATEPNLALSELGYLDKRI 375 (412)
T ss_pred -----cccCcceeHHHHHHHHHhCchhhhhhhccccchh
Confidence 2566677788888887776555554444545543
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=81.91 E-value=0.85 Score=44.67 Aligned_cols=19 Identities=42% Similarity=0.555 Sum_probs=14.5
Q ss_pred CCCe-EEEEecCCccccCCC
Q 042288 26 REKD-TVVADVDGTLLRGRS 44 (515)
Q Consensus 26 ~~~~-lavFD~DgTL~~~ds 44 (515)
+.++ +++||+||||++.+.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRK 23 (245)
T ss_pred CccceEEEEeccCCCcCCCC
Confidence 4556 555999999998764
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=81.91 E-value=4.8 Score=41.48 Aligned_cols=90 Identities=20% Similarity=0.121 Sum_probs=53.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhc-C-----------CcEEEeceEE------------Ee--Cceee-eE-
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFL-G-----------ADMVIGTEIC------------VY--KGRST-GF- 170 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~l-G-----------id~vigt~l~------------~~--~G~~t-G~- 170 (515)
++++.++++| ...|+|.|+..+++.+.+. + | +|.|++..-. ++ +|... +.
T Consensus 191 elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~ 269 (343)
T TIGR02244 191 LFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLKWGEV 269 (343)
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcccCCcc
Confidence 3445667899 6688999999999999997 5 5 4666654321 11 12111 11
Q ss_pred --EecCCccccccHHHHHHHHhcCCCCCceEEEeCC-cCcHHHHh
Q 042288 171 --VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDR-KTDSLFLN 212 (515)
Q Consensus 171 --i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS-~~DlpmL~ 212 (515)
+....+ +..|=+..+.+.++.. ...++.+||+ .+|+---+
T Consensus 270 ~~l~~g~v-Y~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~k 312 (343)
T TIGR02244 270 DGLEPGKV-YSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSK 312 (343)
T ss_pred ccccCCCe-EeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhH
Confidence 111112 4455566777777653 2446668998 47765443
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.81 E-value=0.83 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=24.3
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
.++++| +.+++||=+...++++++. +|++ .+++
T Consensus 31 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~i~ 65 (230)
T PRK01158 31 KAEKLGIPVILATGNVLCFARAAAKL-IGTSGPVIA 65 (230)
T ss_pred HHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCcEEE
Confidence 344578 5566899998889999988 8986 3444
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=81.69 E-value=0.93 Score=44.38 Aligned_cols=17 Identities=47% Similarity=0.690 Sum_probs=15.0
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
.++++||+||||+..+.
T Consensus 5 ~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN 21 (247)
T ss_pred CeEEEEECcCCCcCCCC
Confidence 68999999999998654
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=81.63 E-value=6.4 Score=36.11 Aligned_cols=78 Identities=19% Similarity=0.141 Sum_probs=47.7
Q ss_pred HHHHHHHhCC-CEEEEecCc-HHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--C
Q 042288 120 ETWRVFSSCG-RRCVLTANP-RIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--E 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~-~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~ 195 (515)
++++.++++| .++|+|.+. ...++.+.+. +|+.... +.. .| +.+.+...+...+ .
T Consensus 50 e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~------------~~~-KP-------~p~~~~~~l~~~~~~~ 108 (170)
T TIGR01668 50 DWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP------------HAV-KP-------PGCAFRRAHPEMGLTS 108 (170)
T ss_pred HHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc------------CCC-CC-------ChHHHHHHHHHcCCCH
Confidence 4456777888 567899988 7888888887 8875321 000 11 2223333332211 2
Q ss_pred CceEEEeCCc-CcHHHHhccccce
Q 042288 196 MPDIGLGDRK-TDSLFLNLCKESY 218 (515)
Q Consensus 196 ~~~~aygDS~-~DlpmL~~a~~~~ 218 (515)
..++.+|||. .|+..-+.+|-..
T Consensus 109 ~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 109 EQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred HHEEEECCcchHHHHHHHHcCCeE
Confidence 3478899998 7998777666543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=81.19 E-value=6.4 Score=36.23 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=50.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHH---------HHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRI---------MVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~---------~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++.++++| +.+|+|.+... +.+. .+. +|++.++-+.....++ +-...-+.+.++.
T Consensus 34 ~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~-l~~-~g~~~~~~~~~~~~~~----------~~~~KP~p~~~~~ 101 (173)
T PRK06769 34 KASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE-LKG-FGFDDIYLCPHKHGDG----------CECRKPSTGMLLQ 101 (173)
T ss_pred HHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH-HHh-CCcCEEEECcCCCCCC----------CCCCCCCHHHHHH
Confidence 45666788899 56788887642 2333 455 7887654221110000 0011112334444
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
.+...+ ...++.+|||..|+..=+.+|-..+ |+.
T Consensus 102 ~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~ 138 (173)
T PRK06769 102 AAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRT 138 (173)
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 433221 2347889999999999888876654 544
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=80.87 E-value=3.6 Score=36.82 Aligned_cols=85 Identities=20% Similarity=0.096 Sum_probs=46.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH---HHHHHhcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG---ALMKMLGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~---~l~~~~~~~~~ 195 (515)
+.+++++ ++ ...|+|++...+++.+.+. +|++..+-..+... ..| ...|.. .++. ++. ..
T Consensus 52 e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~----------~d~--~~~KP~~~k~l~~-l~~-~p 115 (148)
T smart00577 52 EFLKRAS-ELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFR----------DEC--VFVKGKYVKDLSL-LGR-DL 115 (148)
T ss_pred HHHHHHH-hccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEEC----------ccc--cccCCeEeecHHH-cCC-Ch
Confidence 4445565 56 5678999999999999997 87632111111110 011 111211 2222 232 13
Q ss_pred CceEEEeCCcCcHHHHhccccceeeCC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
..++.+|||.+|..+-. .+.+.|.|
T Consensus 116 ~~~i~i~Ds~~~~~aa~--~ngI~i~~ 140 (148)
T smart00577 116 SNVIIIDDSPDSWPFHP--ENLIPIKP 140 (148)
T ss_pred hcEEEEECCHHHhhcCc--cCEEEecC
Confidence 45888999999988543 34455543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=80.63 E-value=0.8 Score=41.64 Aligned_cols=14 Identities=36% Similarity=0.783 Sum_probs=12.6
Q ss_pred EEEEecCCccccCC
Q 042288 30 TVVADVDGTLLRGR 43 (515)
Q Consensus 30 lavFD~DgTL~~~d 43 (515)
+++||+||||+.++
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 57999999999976
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.25 E-value=2.2 Score=41.49 Aligned_cols=119 Identities=10% Similarity=-0.003 Sum_probs=72.9
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC---cEEEeceEEEe-Ccee
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA---DMVIGTEICVY-KGRS 167 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi---d~vigt~l~~~-~G~~ 167 (515)
-.|.+..++++.+.+.-.. ...-+.+..+.|++.+ .+.|.||+.-..++.+.++-++. -+++++-+.++ +|.+
T Consensus 120 q~~f~k~~I~~~Va~s~i~--lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l 197 (298)
T KOG3128|consen 120 QGGFSKNAIDDIVAESNIA--LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNL 197 (298)
T ss_pred cCCcCHHHHHHHHHHhhHH--HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchh
Confidence 4567888888877765321 1112456677888899 56678999888888888763443 36778888775 5553
Q ss_pred ---eeEEecCCccccccHHHHH-HHHhcCCC-CCceEEEeCCcCcHHHHhccc
Q 042288 168 ---TGFVKSPGVLVGKNKAGAL-MKMLGDDE-EMPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 168 ---tG~i~~~~~~~g~~K~~~l-~~~~~~~~-~~~~~aygDS~~DlpmL~~a~ 215 (515)
.+.+....| ...|+-.. .+++.... ......-|||.+|+.|=+-|.
T Consensus 198 ~gF~~~Lihtfn--kn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~ 248 (298)
T KOG3128|consen 198 CGFSQPLIHTFN--KNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP 248 (298)
T ss_pred hhhhHHHHHHHc--cchHHHHhhhHHHhhccCCceEEEeccccccchhhcCCc
Confidence 334433222 22333322 33333221 233567899999999977543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 515 | |||
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 5e-10
Identities = 26/164 (15%), Positives = 44/164 (26%), Gaps = 12/164 (7%)
Query: 34 DVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGI---RVLIF 90
D+D TLL S + +A G + Y +
Sbjct: 10 DLDHTLLPLDSDY-QWADFLARTGRAGDPAEAR--RRNDDLMERYNRGELTAEQAAEFML 66
Query: 91 ATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSC---GRRCVL-TANPRIMVEAFL 146
A + + + L + V G C L TA + +
Sbjct: 67 GLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAP-I 125
Query: 147 KDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190
G +I T+ GR TG ++ + K + + L
Sbjct: 126 ARAFGVQHLIATDPEYRDGRYTGRIEGT-PSFREGKVVRVNQWL 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 3e-04
Identities = 77/496 (15%), Positives = 134/496 (27%), Gaps = 158/496 (31%)
Query: 101 IESVARAVLPK------FYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADM 154
++ + +++L K S D T R+F L + MV+ F+++ L +
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW------TLLSKQEEMVQKFVEEVLRINY 91
Query: 155 -----VIGTEICVYKGRS---TGFVKSPGVLVGKNKA----------------GALMK-- 188
I TE + S +++ L N+ AL++
Sbjct: 92 KFLMSPIKTE---QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
Query: 189 ---------MLG------------DDE---EMPD----IGLGDRKTDSLFL----NLCKE 216
+LG + +M + L + + L L
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-- 206
Query: 217 SYMVPPNPKVDPVSQDKLPKPIVFHDGRL----VQKPTPFMALLTIL------WIPVGFL 266
Y + PN + I L KP LL +L F
Sbjct: 207 -YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE-NCLL-VLLNVQNAKAWNAFN 263
Query: 267 LACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPI 326
L+C ++ L+ F + + S+ T + + H L P
Sbjct: 264 LSC-KI---------LLTTRFKQVTDFL------------SAATTTHISLDHHSMTLTPD 301
Query: 327 ----FLSTALGRPIPAVTYSLSRLSELISP--IKTV-RLTRDRAT-----DASMIEKLLE 374
L L L R +P + + RD +KL
Sbjct: 302 EVKSLLLKYLDCRPQ----DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 375 KGDLVICPEGTTCREPFLLRFSALFAELT--DEVVPVAMSNRMSMFHGTTARGWKGMDPF 432
+ + EP R +F L+ + + +S+ W +
Sbjct: 358 IIESSL-----NVLEPAEYR--KMFDRLSVFPPSAHI-PTILLSLI-------WFDVIKS 402
Query: 433 --YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRK--D 488
+N Y + + K P E T S I + L E + R D
Sbjct: 403 DVMVVVNKLHKY--SLVEKQPKESTISI----PS----IYLELKVKLENE-YALHRSIVD 451
Query: 489 KYRALAGNDGTVVEKP 504
Y D + P
Sbjct: 452 HYNIPKTFDSDDLIPP 467
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 5e-04
Identities = 53/449 (11%), Positives = 114/449 (25%), Gaps = 158/449 (35%)
Query: 11 DSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSP 70
++FN C + + V D S L + L+P
Sbjct: 260 NAFNL----SCKILLTTRFKQVTDFLSAATTTHIS-----LDHHSMT----------LTP 300
Query: 71 LAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLPKFYS--GDL---HPETW--- 122
E + + + + P+ S + TW
Sbjct: 301 ---------DEVKSL----LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 123 ---------RVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGF--- 170
+ S + P + F + + F
Sbjct: 348 KHVNCDKLTTIIES----SLNVLEPAEYRKMFD------RLSV-------------FPPS 384
Query: 171 VKSPGVLVGKNKAGALMKML---GDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVD 227
P L+ ++ ++ + +N + +V PK
Sbjct: 385 AHIP---------TILLSLIWFDVIKSDVMVV-----------VNKLHKYSLVEKQPKES 424
Query: 228 PVS--------QDKLPKPIVFHDGRLVQKPTPFMALLTILWIPVGFLLACLRMAAGALLP 279
+S + KL H +V IP F L+P
Sbjct: 425 TISIPSIYLELKVKLENEYALHR-SIVDH----------YNIPKTFDS-------DDLIP 466
Query: 280 MPLVYYAFWALGVRVY-IKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPA 338
L Y + +G + +K ++ + LF LD F L + I
Sbjct: 467 PYLDQYFYSHIG---HHLKNI--EHPERMT-----LF---RMVFLDFRF----LEQKIRH 509
Query: 339 VTYSLSRLSELISPIKTVRLTRDRATDAS-MIEKLLEKGDLVICPEGTTCREPFLLRFSA 397
+ + + +++ ++ ++ + D E+L+ + FL +
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN--AI----------LDFLPKIEE 557
Query: 398 --LFAELTDEVVPVAMSNRMSMFHGTTAR 424
+ ++ TD ++ +A+ +
Sbjct: 558 NLICSKYTD-LLRIALMAEDEAIFEEAHK 585
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.93 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 99.88 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.86 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.86 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.65 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.63 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.62 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.54 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.5 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.39 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.27 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.2 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.14 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.09 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.07 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.95 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.95 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.91 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.91 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.9 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.89 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.89 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.86 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.84 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.83 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.82 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.82 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.81 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.79 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.78 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.78 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.76 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.76 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.76 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.76 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.75 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.75 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.74 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.74 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.72 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.72 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.7 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.7 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.69 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.68 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.66 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.66 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.66 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.65 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.65 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.64 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.63 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 98.63 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.63 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.62 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.6 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.59 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.58 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.58 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.58 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.54 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.53 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.52 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.52 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.52 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 98.51 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.49 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.49 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.48 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.45 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.44 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.44 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.4 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.4 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.38 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.37 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.35 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.32 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.29 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.28 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.25 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.23 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.18 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 98.18 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.13 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 98.12 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.1 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.09 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.07 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.06 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 97.99 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.76 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.76 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.74 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.68 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.68 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 97.67 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.67 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 97.57 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 97.55 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.54 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.27 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.17 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.13 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.06 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.03 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.03 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.95 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.89 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 95.94 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.88 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.84 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.78 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.74 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.66 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 96.59 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.37 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.31 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 96.28 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 95.55 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 95.49 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.29 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 95.28 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 95.21 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 95.2 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.17 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 95.15 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 94.87 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 94.86 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 94.43 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 94.22 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 94.11 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 93.85 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 93.85 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 93.81 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 93.77 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 93.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 93.7 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 93.26 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 93.1 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 91.95 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 91.74 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 90.71 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 90.67 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 89.8 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.04 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 87.46 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 85.5 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 84.76 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 83.9 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 83.62 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 83.19 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 83.04 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 82.82 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 82.69 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 82.26 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 82.2 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 81.94 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 81.48 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 81.22 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 80.94 |
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=214.74 Aligned_cols=211 Identities=13% Similarity=0.083 Sum_probs=157.6
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccH--HHHHH-HHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGV--LRLLL-LLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~--~~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
.++++|||||||+++++.+.+.. +....+.. ..... ........+..+.+. .. ...+.....+.|.+.++++++
T Consensus 4 ~k~viFDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 80 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLDSDYQWAD-FLARTGRAGDPAEARRRNDDLMERYNRGELT-AE-QAAEFMLGLLAAHSPVELAAW 80 (232)
T ss_dssp CEEEEECCBTTTBSSCHHHHHHH-HHHHTTSSSSHHHHHHHHHHHHHHHHHTCSC-HH-HHHHHHHHHHHTSCHHHHHHH
T ss_pred CcEEEEeCCCCCcCCchHHHHHH-HHHHcCCCCccHHHHHHHHHHHHHHHCCCCC-HH-HHHHHHHHHhcCCCHHHHHHH
Confidence 57999999999999887553332 22221111 11111 000111111122222 22 133445567789999999999
Q ss_pred HHHHhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccc
Q 042288 105 ARAVLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.+.+.+.++|.+.+ .++++| .++|+|+|+..+++++++. +|+++++++.+.+.+|.++|++.+++| .+.
T Consensus 81 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~ 158 (232)
T 3fvv_A 81 HEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPS-FRE 158 (232)
T ss_dssp HHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCS-STH
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCC-cch
Confidence 9999888776678888776 456799 5678999999999999998 999999999999999999999998888 899
Q ss_pred cHHHHHHHHhcCCC-----CCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-EccCc
Q 042288 181 NKAGALMKMLGDDE-----EMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHDGR 244 (515)
Q Consensus 181 ~K~~~l~~~~~~~~-----~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~r 244 (515)
+|.+.+++++...+ ...+++||||.+|++|++.|+.+++|||++.+++.|+ ++||+++ |...|
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~-~~~w~~~~~~~~~ 227 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQ-ARGWQVIDLFDHL 227 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHH-HHTCEEECCC---
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHH-HCCCcEeehhhhh
Confidence 99999988876533 2347999999999999999999999999999999999 9999998 76543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=204.44 Aligned_cols=211 Identities=18% Similarity=0.168 Sum_probs=143.9
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHH-HHH-HhhhH----------HHHHhcccC-cccHHHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRL-LLL-LLLSP----------LAGFLYYYV-SESAGIRVLIFATF 93 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~-~~~-l~~~~----------~~~~~~~l~-~~~~~~~~~~~~~~ 93 (515)
..++|+||+||||+.+|+...++.+. ...+...+. +.. +...+ .....+.+. ........++..++
T Consensus 24 ~~riAVFD~DgTLi~~D~~e~~~~y~-~~~~~~~~~~~~~~l~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 102 (327)
T 4as2_A 24 KGAYAVFDMDNTSYRYDLEESLLPYL-EMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVF 102 (327)
T ss_dssp SSCEEEECCBTTTEESCHHHHHHHHH-HHTTSSCTTTSCGGGCCSCCCCCSSCCCCHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCeeCCCcHHHHHHHH-HHhCCcCHHHhhhhhcCccccccHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 46899999999999999866655432 221110000 000 00000 000000000 01112335567789
Q ss_pred cCCCHHHHHHHHHHHhchh------------------hcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhh--
Q 042288 94 AGMKVPSIESVARAVLPKF------------------YSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDF-- 149 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~------------------~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~-- 149 (515)
+|++.+|+++++++++... +.++++|++.+ .|+++| .++|||||++++|+|+|+..
T Consensus 103 aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~ 182 (327)
T 4as2_A 103 SGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRY 182 (327)
T ss_dssp TTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGG
T ss_pred cCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhccc
Confidence 9999999999999998632 34578999887 466899 67889999999999999862
Q ss_pred -cCC--cEEEeceEEEeCc-------------------------eeeeEEecCCccccccHHHHHHHHhcCCCCCceEEE
Q 042288 150 -LGA--DMVIGTEICVYKG-------------------------RSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGL 201 (515)
Q Consensus 150 -lGi--d~vigt~l~~~~G-------------------------~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~ay 201 (515)
+|| ++|||++++.+++ .+|+.+.++.| ++++|+.+|++++.. +..+.+|+
T Consensus 183 ~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~-~~~GK~~~I~~~i~~-g~~Pi~a~ 260 (327)
T 4as2_A 183 GYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPAT-WMAGKQAAILTYIDR-WKRPILVA 260 (327)
T ss_dssp SCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCS-STHHHHHHHHHHTCS-SCCCSEEE
T ss_pred ccCCCHHHeEeeeeeeecccccccccccccccccccccccccccccccccccccc-ccCccHHHHHHHHhh-CCCCeEEe
Confidence 466 7999999988643 24677888888 999999999999843 24678999
Q ss_pred eCC-cCcHHHHhc----cccceeeCCCCCCC-------------------cccccCCCCceEEc
Q 042288 202 GDR-KTDSLFLNL----CKESYMVPPNPKVD-------------------PVSQDKLPKPIVFH 241 (515)
Q Consensus 202 gDS-~~DlpmL~~----a~~~~~Vnp~~~l~-------------------~~A~~~~~W~i~f~ 241 (515)
||| .+|.+||+. .+...+||.+.+.+ .++. ++||.|||.
T Consensus 261 Gns~dgD~~ML~~~~~~~~~~L~in~~~~~~e~~~~~~~~~~~~~~~~g~~v~~-~~~W~~v~p 323 (327)
T 4as2_A 261 GDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTA-DRNWVIVTP 323 (327)
T ss_dssp ESCHHHHHHHHHHTSCTTCEEEEECCCHHHHHHHHHHHHHHHHHHHTTTCCCCT-TSSEEEECH
T ss_pred cCCCCCCHHHHhccccCCCeEEEEecCCchHHHHHHHHHHHHHHHHHcCCchhh-hCCCEEeCc
Confidence 999 699999954 45777889865432 2444 678888765
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-22 Score=202.69 Aligned_cols=202 Identities=14% Similarity=0.057 Sum_probs=139.3
Q ss_pred HHHHHHhHhcceEEEEcC-------CCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC-------CccEEEec----
Q 042288 281 PLVYYAFWALGVRVYIKG-------TPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-------PIPAVTYS---- 342 (515)
Q Consensus 281 ~~~~~l~~~~Gvrv~v~G-------~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~-------~~~~v~k~---- 342 (515)
.|.+.+++..|++ |.| .|+++ .++++|++|||||.+|++++..++++ ++.+|||+
T Consensus 100 ~~ir~li~~~~s~--V~G~e~~~~~~E~l~-----~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~ 172 (367)
T 1iuq_A 100 NYIRPLIDFGNSF--VGNLSLFKDIEEKLQ-----QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLA 172 (367)
T ss_dssp HHHGGGBCGGGCE--EECHHHHHHHHHHHH-----TTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHH
T ss_pred HHHHHHHhhcCCE--eecchhhhhHHhhcc-----CCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhc
Confidence 3556666666777 777 77776 57899999999999999999999975 78999998
Q ss_pred ccchhhh--hhcCCeeEE----e------cCChhh----HHHHHHHHHc-C-CeEEecCCeeeCC----Ccc--ccccch
Q 042288 343 LSRLSEL--ISPIKTVRL----T------RDRATD----ASMIEKLLEK-G-DLVICPEGTTCRE----PFL--LRFSAL 398 (515)
Q Consensus 343 ~~~~g~~--~~~~~~i~i----d------R~~~~~----~~~~~~~l~~-G-~l~IFPEGTrs~~----~~l--~~Fk~G 398 (515)
.|+..++ .+.++||++ + |++.+. ++++.+.|++ | +++|||||||+++ +.+ .+|++|
T Consensus 173 ~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~g 252 (367)
T 1iuq_A 173 DPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDAS 252 (367)
T ss_dssp CTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHH
T ss_pred CccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccch
Confidence 4555332 133457775 5 544332 6677888998 5 8999999999985 444 459999
Q ss_pred -h-------hccCCc--EEEEEEEcCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCC----HHH
Q 042288 399 -F-------AELTDE--VVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKS----SHD 464 (515)
Q Consensus 399 -f-------~~~~~p--VvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~----~~~ 464 (515)
| .++++| |+||+|.++..++.+.+.-..... ....++++ |.|.|+|||+++++....++ .++
T Consensus 253 s~~~~~~LA~ksg~P~hIvPvaI~t~~imppp~~ve~~~g~---~r~i~~~~-V~v~ig~pI~~~~l~~~~e~~~e~~~~ 328 (367)
T 1iuq_A 253 SVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGE---KRVIAFNG-AGLSVAPEISFEEIAATHKNPEEVREA 328 (367)
T ss_dssp HHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC-------------CCCCCBC-CEEEECCCCCHHHHHHTSSSHHHHHHH
T ss_pred hhhHHHHHHHHcCCCceEEEEEEEeccccCCcccccccccc---cceeeccc-EEEEECCccchhhccccccchHHHHHH
Confidence 4 357999 999999977666654210000000 01235555 99999999988764211222 346
Q ss_pred HHHHHHHHHHHHcCCCcCCCCHHHHHHHHccCCCcccc
Q 042288 465 VANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTVVE 502 (515)
Q Consensus 465 la~~v~~~ia~~l~~~~t~~t~~d~~~~~~~~~~~~~~ 502 (515)
+++.+++.|++.+ +....+..|..|....
T Consensus 329 l~e~v~~~I~~~y---------~~l~~~i~~~~~~~~~ 357 (367)
T 1iuq_A 329 YSKALFDSVAMQY---------NVLKTAISGKQGLGAS 357 (367)
T ss_dssp HHHHHHHHHHHHH---------HHHHHHTTTCCGGGGC
T ss_pred HHHHHHHHHHHHH---------HHHHHHHhcccccccc
Confidence 9999999999877 3445556677765443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-22 Score=205.11 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=119.6
Q ss_pred HHHcCCCHHHHHHHHHHHhchhhcC---------------------------CCcHHHHH---HHHhCC-CEEEEecCcH
Q 042288 91 ATFAGMKVPSIESVARAVLPKFYSG---------------------------DLHPETWR---VFSSCG-RRCVLTANPR 139 (515)
Q Consensus 91 ~~~~G~~~~~l~~~~~~~~~~~~~~---------------------------~~~~~~~~---~l~~~G-~~vivSaS~~ 139 (515)
.++.|++.+|+++++++++.....+ +++|++.+ .|+++| .++|||||+.
T Consensus 169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~ 248 (385)
T 4gxt_A 169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFI 248 (385)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcH
Confidence 4679999999999999998644322 26898887 567899 6788999999
Q ss_pred HHHHHHHHhhcCC------cEEEeceEEEe-CceeeeEEecC--CccccccHHHHHHHHhcCC-CCCceEEEeCCcCcHH
Q 042288 140 IMVEAFLKDFLGA------DMVIGTEICVY-KGRSTGFVKSP--GVLVGKNKAGALMKMLGDD-EEMPDIGLGDRKTDSL 209 (515)
Q Consensus 140 ~~v~~ia~~~lGi------d~vigt~l~~~-~G~~tG~i~~~--~~~~g~~K~~~l~~~~~~~-~~~~~~aygDS~~Dlp 209 (515)
.+++|+|++ +|+ ++|+|++++++ ||++||++.+. .| .+++|+++|++++..+ +..+++|||||.||+|
T Consensus 249 ~~v~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~-~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ 326 (385)
T 4gxt_A 249 DIVRAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPIS-IREGKVQTINKLIKNDRNYGPIMVGGDSDGDFA 326 (385)
T ss_dssp HHHHHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCC-STHHHHHHHHHHTCCTTEECCSEEEECSGGGHH
T ss_pred HHHHHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCcccee-CCCchHHHHHHHHHhcCCCCcEEEEECCHhHHH
Confidence 999999998 875 67999999996 89999999873 35 8999999999987653 2356899999999999
Q ss_pred HHhcc---ccceeeCCCC-----CCCcccccCCCCceEE
Q 042288 210 FLNLC---KESYMVPPNP-----KVDPVSQDKLPKPIVF 240 (515)
Q Consensus 210 mL~~a---~~~~~Vnp~~-----~l~~~A~~~~~W~i~f 240 (515)
||+.+ +..+++|+.. .|+..|. +.+|.++.
T Consensus 327 ML~~~~~~~~~liinr~~~~~~~~l~~~a~-~~~~~~~l 364 (385)
T 4gxt_A 327 MLKEFDHTDLSLIIHRANSGLIDDLRQKAR-EGSLRYYS 364 (385)
T ss_dssp HHHHCTTCSEEEEECCSCCSHHHHHHHHHH-TTCSSEEE
T ss_pred HHhcCccCceEEEEcCCcccchHHHHHHHh-ccCCeEEE
Confidence 99964 4467888644 4677787 88898764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.9e-16 Score=160.72 Aligned_cols=188 Identities=24% Similarity=0.283 Sum_probs=135.7
Q ss_pred CCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 25 GREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
.+.+++++|||||||++.++ +..+... .+.......+. ..+..+.+...+ .+++ ....++|.+.+.++++
T Consensus 182 ~~~~k~viFD~DgTLi~~~~-~~~la~~-~g~~~~~~~~~------~~~~~g~~~~~~-~~~~-~~~~l~~~~~~~~~~~ 251 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEV-IEMLAAK-AGAEGQVAAIT------DAAMRGELDFAQ-SLQQ-RVATLAGLPATVIDEV 251 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCH-HHHHHHH-TTCHHHHHHHH------HHHHTTCSCHHH-HHHH-HHHTTTTCBTHHHHHH
T ss_pred ccCCcEEEEcCcccCcCCch-HHHHHHH-cCCcHHHHHHH------HHHhcCCcCHHH-HHHH-HHHHhcCCCHHHHHHH
Confidence 44578999999999999765 4444322 11111111110 111111222122 1332 3356889999988887
Q ss_pred HHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccc
Q 042288 105 ARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.+++- ++| +.++.++++| +++|+|+++..+++.++++ +|+++++++.+++.+|.+||++.+..+ .+.
T Consensus 252 ~~~~~-------~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~-~~k 322 (415)
T 3p96_A 252 AGQLE-------LMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPII-DRA 322 (415)
T ss_dssp HHHCC-------BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCC-CHH
T ss_pred HHhCc-------cCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCC-CCc
Confidence 66541 344 4555777899 5678999999999999998 999999999999999999999998876 788
Q ss_pred cHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 181 NKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.|.+.++..+...+. ..++++|||.+|++|++.||.++++|+++.++..|.
T Consensus 323 pk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad 375 (415)
T 3p96_A 323 GKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVAD 375 (415)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCS
T ss_pred chHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCC
Confidence 899888887655322 347999999999999999999999999888887765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=153.74 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=133.5
Q ss_pred cCCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHH
Q 042288 23 SIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIE 102 (515)
Q Consensus 23 ~~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~ 102 (515)
...+.+++++|||||||++.++ +..+... . +. ...... ....+..+.+...+ .+. .....+.|.+.+.++
T Consensus 103 ~~~~~~kaviFDlDGTLid~~~-~~~la~~-~--g~-~~~~~~---~~~~~~~g~~~~~~-~l~-~~~~~l~~~~~~~i~ 172 (317)
T 4eze_A 103 QPLPANGIIAFDMDSTFIAEEG-VDEIARE-L--GM-STQITA---ITQQAMEGKLDFNA-SFT-RRIGMLKGTPKAVLN 172 (317)
T ss_dssp SSCCCSCEEEECTBTTTBSSCH-HHHHHHH-T--TC-HHHHHH---HHHHHHTTSSCHHH-HHH-HHHHTTTTCBHHHHH
T ss_pred ccCCCCCEEEEcCCCCccCCcc-HHHHHHH-h--CC-cHHHHH---HHHHHhcCCCCHHH-HHH-HHHHHhcCCCHHHHH
Confidence 3446789999999999999765 3333221 1 11 111110 00111112222112 122 223457788888888
Q ss_pred HHHHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccc
Q 042288 103 SVARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLV 178 (515)
Q Consensus 103 ~~~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~ 178 (515)
++.+++- ++| ++++.++++| .++|+|+++..+++.++++ +|++.++++.+.+++|.+||++.++.+ .
T Consensus 173 ~~~~~~~-------l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~-~ 243 (317)
T 4eze_A 173 AVCDRMT-------LSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIM-N 243 (317)
T ss_dssp HHHHTCC-------BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCC-C
T ss_pred HHHhCCE-------ECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccC-C
Confidence 7766542 334 4556778899 5678999999999999998 999999999999999999999998766 7
Q ss_pred cccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 179 GKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
+..|.+.++..+...+. ..++++|||.+|++|++.||.++++|+++.++..|.
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~~~~~~~~~a~ 298 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIH 298 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHHhcC
Confidence 78888888777654322 347899999999999999999999998887776554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=143.17 Aligned_cols=186 Identities=12% Similarity=0.117 Sum_probs=128.4
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
..++++||+||||+++++ +..+... .+ . ...... .. ..+..+.. .....+. .....+.|.+.++++++.+
T Consensus 3 ~~k~vifDlDGTL~~~~~-~~~~~~~-~~--~-~~~~~~--~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 72 (217)
T 3m1y_A 3 LQKLAVFDFDSTLVNAET-IESLARA-WG--V-FDEVKT--IT-LKAMNGET-DFHKSLI-LRVSKLKNMPLKLAKEVCE 72 (217)
T ss_dssp CCEEEEEECBTTTBSSCH-HHHHHHH-TT--C-HHHHTT--CC-CC----CC-CHHHHHH-HHHHTTTTCBHHHHHHHHT
T ss_pred CCcEEEEeCCCCCCCchh-HHHHHHH-cC--c-hHHHHH--HH-HHHHcCcC-CHHHHHH-HHHHHhcCCCHHHHHHHHh
Confidence 368999999999999765 3332211 11 1 110000 00 00000001 0011122 2234567888888877555
Q ss_pred HHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccH
Q 042288 107 AVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 107 ~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K 182 (515)
+. ..+| ++++.++++| .++|+|+++..+++.+.+. +|++..+...+..++|.++|.+.+..+ .+..|
T Consensus 73 ~~-------~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~-~~k~k 143 (217)
T 3m1y_A 73 SL-------PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMM-FSHSK 143 (217)
T ss_dssp TC-------CBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCC-STTHH
T ss_pred cC-------cCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCC-CCCCh
Confidence 42 1344 5556777899 6678999999999999998 999999999999999999999988776 78889
Q ss_pred HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 183 AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 183 ~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.+.++..+...+ ...++++|||.+|++|++.||.++++|+++.+++.|.
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ad 194 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHAT 194 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHhcc
Confidence 888877765422 2458999999999999999999999999988887665
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-13 Score=129.15 Aligned_cols=188 Identities=15% Similarity=0.155 Sum_probs=116.6
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
..++++||+||||+++++ +..+.. ..+ ........ . ... ..........+.. ....+.|...++.++...
T Consensus 4 ~~k~i~fDlDGTL~d~~~-~~~~~~-~~~--~~~~~~~~---~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 73 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET-IDEIAR-EAG--VEEEVKKI---T-KEA-MEGKLNFEQSLRK-RVSLLKDLPIEKVEKAIK 73 (211)
T ss_dssp CCEEEEEECCCCCBSSCH-HHHHHH-HTT--CHHHHHHH---H-HHH-HTTSSCHHHHHHH-HHHTTTTCBHHHHHHHHH
T ss_pred CCcEEEEeCCCCCCCccH-HHHHHH-HhC--cHHHHHHH---H-HHH-HcCCCCHHHHHHH-HHHHhcCCCHHHHHHHHH
Confidence 358999999999999754 333321 111 11111000 0 001 1111111111111 123456666555443222
Q ss_pred HHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHH
Q 042288 107 AVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGA 185 (515)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~ 185 (515)
...+.+ -..++++.++++| ..+|+|+++...++++.+. +|++.++.+.+...++.++|....+.+ .+..|...
T Consensus 74 ---~~~l~~-~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~K~~~ 147 (211)
T 1l7m_A 74 ---RITPTE-GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVL-KENAKGEI 147 (211)
T ss_dssp ---TCCBCT-THHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSC-STTHHHHH
T ss_pred ---hCCCCc-cHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCcc-CCccHHHH
Confidence 111112 2245666778899 5678999999999999998 999887777766667788888776655 57789888
Q ss_pred HHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 186 LMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 186 l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
+++.+...+. ..++++|||.||++|++.||.++++++++.++..|
T Consensus 148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~~~a 194 (211)
T 1l7m_A 148 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA 194 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEESCCHHHHTTC
T ss_pred HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEECCCHHHHhhc
Confidence 8877654322 34899999999999999999999999766554444
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=140.70 Aligned_cols=187 Identities=17% Similarity=0.208 Sum_probs=126.7
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVA 105 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~ 105 (515)
...++++||+||||++.++ +..+... .+.......+. ..+..+.+...+ ...+ ....+.+.+.+.++.+.
T Consensus 105 ~~~~~viFD~DgTLi~~~~-~~~~~~~-~g~~~~~~~~~------~~~~~~~~~~~~-~~~~-~~~~l~~~~~~~~~~~~ 174 (335)
T 3n28_A 105 TKPGLIVLDMDSTAIQIEC-IDEIAKL-AGVGEEVAEVT------ERAMQGELDFEQ-SLRL-RVSKLKDAPEQILSQVR 174 (335)
T ss_dssp TSCCEEEECSSCHHHHHHH-HHHHHHH-HTCHHHHHHHH------HHHHTTSSCHHH-HHHH-HHHTTTTCBTTHHHHHH
T ss_pred cCCCEEEEcCCCCCcChHH-HHHHHHH-cCCchHHHHHH------HHHhcCCCCHHH-HHHH-HHHHhcCCCHHHHHHHH
Confidence 3578999999999999543 2222211 11001111110 111111111111 1222 23356777777666544
Q ss_pred HHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCcccccc
Q 042288 106 RAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKN 181 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~ 181 (515)
+.. ..+|+ +++.++++| .++|+|+++..+++.++++ +|++.++++.+++.+|.+||.+.+..+ .+..
T Consensus 175 ~~~-------~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~-~~kp 245 (335)
T 3n28_A 175 ETL-------PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVV-SAQT 245 (335)
T ss_dssp TTC-------CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCC-CHHH
T ss_pred HhC-------CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeeccccc-Chhh
Confidence 331 13444 555677899 5677999999999999998 999999999999999999999988765 7788
Q ss_pred HHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 182 KAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 182 K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
|.+.++..+...+. ..++++|||.||++|++.||.++++|+++.++..|.
T Consensus 246 k~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~a~ 297 (335)
T 3n28_A 246 KADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQ 297 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTTSS
T ss_pred hHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 88887777654322 347999999999999999999999998887776665
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=126.26 Aligned_cols=118 Identities=15% Similarity=0.248 Sum_probs=91.9
Q ss_pred HHHHHcCCCHHHHHHHHHHHhchhhcCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeC
Q 042288 89 IFATFAGMKVPSIESVARAVLPKFYSGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK 164 (515)
Q Consensus 89 ~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~ 164 (515)
....+.|.+.++++++.+++ ..+|++. +.++++| .++|+|++....++.+ +. +|++.. ++.+...+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~-~~~~~~~~ 128 (201)
T 4ap9_A 59 RVGLIRGIDEGTFLRTREKV-------NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFM-ANRAIFED 128 (201)
T ss_dssp HHHHTTTCBHHHHHHGGGGC-------CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEE-EEEEEEET
T ss_pred HHHHhcCCCHHHHHHHHHhC-------CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhh-eeeEEeeC
Confidence 34567888888887644333 2455554 5677899 5678999999999999 87 999888 88888788
Q ss_pred ceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCC
Q 042288 165 GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPK 225 (515)
Q Consensus 165 G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~ 225 (515)
+.++| +.+ ....|...++++ . ...++++|||.+|++|++.||.++++++...
T Consensus 129 ~~~~~----~~~-~~~~k~~~l~~l--~--~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~ 180 (201)
T 4ap9_A 129 GKFQG----IRL-RFRDKGEFLKRF--R--DGFILAMGDGYADAKMFERADMGIAVGREIP 180 (201)
T ss_dssp TEEEE----EEC-CSSCHHHHHGGG--T--TSCEEEEECTTCCHHHHHHCSEEEEESSCCT
T ss_pred CceEC----CcC-CccCHHHHHHhc--C--cCcEEEEeCCHHHHHHHHhCCceEEECCCCc
Confidence 88888 223 456699999887 3 4668999999999999999999999987765
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.3e-12 Score=117.84 Aligned_cols=112 Identities=16% Similarity=0.163 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEe-CceeeeEEe
Q 042288 97 KVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVY-KGRSTGFVK 172 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~-~G~~tG~i~ 172 (515)
..+++.+..+++.+....+. ..++++.++++| .++|+|+++..+++++.+. +|+ +.++++.+.+. +|.+++ +.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 143 (219)
T 3kd3_A 67 TKQSIKEFSNKYCPNLLTDG-IKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKE-LD 143 (219)
T ss_dssp BHHHHHHHHHHHTTTTBCTT-HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEE-EE
T ss_pred CHHHHHHHHHhhccccCChh-HHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceec-cC
Confidence 45666665555543321111 234556777899 5678999999999999998 998 56888888774 677777 44
Q ss_pred cCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhc
Q 042288 173 SPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNL 213 (515)
Q Consensus 173 ~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~ 213 (515)
.+.+ ..+.|.+++++.++.. ...++++|||.+|++|++.
T Consensus 144 ~~~~-~~~~~~~~l~~~~~~~-~~~~~~vGD~~~Di~~~~~ 182 (219)
T 3kd3_A 144 NSNG-ACDSKLSAFDKAKGLI-DGEVIAIGDGYTDYQLYEK 182 (219)
T ss_dssp CTTS-TTTCHHHHHHHHGGGC-CSEEEEEESSHHHHHHHHH
T ss_pred CCCC-CcccHHHHHHHHhCCC-CCCEEEEECCHhHHHHHhC
Confidence 4445 6678999999887642 3568999999999999974
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.3e-11 Score=116.71 Aligned_cols=172 Identities=14% Similarity=0.078 Sum_probs=106.0
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARA 107 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 107 (515)
.++++|||||||++.||. ..+... .+ ......+ ...+ ...... ..+.+...+..++.+..+++. +
T Consensus 6 ~k~viFD~DGTL~d~ds~-~~~~~~-~~-~~~~~~~------~~~~-~~g~~~----~~~~~~~~~~~~~~~~~~~~~-~ 70 (236)
T 2fea_A 6 KPFIICDFDGTITMNDNI-INIMKT-FA-PPEWMAL------KDGV-LSKTLS----IKEGVGRMFGLLPSSLKEEIT-S 70 (236)
T ss_dssp CEEEEECCTTTTBSSCHH-HHHHHH-HS-CTHHHHH------HHHH-HTTSSC----HHHHHHHHHTTSBGGGHHHHH-H
T ss_pred CcEEEEeCCCCCCccchH-HHHHHH-hc-hhhHHHH------HHHH-HhCcCc----HHHHHHHHHHhcCCChHHHHH-H
Confidence 479999999999998764 333221 11 1101111 0111 111111 112233344444333233322 2
Q ss_pred HhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhc-CCcEEEeceEEEeCceeeeEEecCC---cc--
Q 042288 108 VLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFL-GADMVIGTEICVYKGRSTGFVKSPG---VL-- 177 (515)
Q Consensus 108 ~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~l-Gid~vigt~l~~~~G~~tG~i~~~~---~~-- 177 (515)
++.. ...++|.+.+ .++++| .++|+|+++..+++.+++. + +++.+++++....+|++++....|. |.
T Consensus 71 ~~~~--~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 71 FVLE--DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp HHHH--HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSC
T ss_pred HHhc--CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhc-CCCCCeEEeeeeEEcCCceEEecCCCCccccccc
Confidence 3221 1235565554 667789 6788999999999999884 4 6688999998777888888764332 21
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.|.+|++.++++--. ...++++|||.+|+++.+.+|.+++
T Consensus 148 ~~~~K~~~~~~~~~~--~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 148 CGCCKPSVIHELSEP--NQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp CSSCHHHHHHHHCCT--TCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred cCCcHHHHHHHHhcc--CCeEEEEeCChHHHHHHHhCCeeee
Confidence 267899998876322 4568899999999999999999876
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-10 Score=109.09 Aligned_cols=122 Identities=13% Similarity=0.141 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHhchhhcCCCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEE-eCceeeeE
Q 042288 95 GMKVPSIESVARAVLPKFYSGDLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICV-YKGRSTGF 170 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~-~~G~~tG~ 170 (515)
|++.++++++ ... ...+|.+.+ .++++..++|+|+++...++.+++. +|++..+++.+.. .++.++|.
T Consensus 55 ~~~~~~~~~~----~~~---~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~ 126 (206)
T 1rku_A 55 GLKLGDIQEV----IAT---LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGY 126 (206)
T ss_dssp TCCHHHHHHH----HTT---CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEE
T ss_pred CCCHHHHHHH----HHh---cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEee
Confidence 6677666653 221 124555554 5555623467999999999999998 9998888777766 35666665
Q ss_pred EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 171 VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 171 i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
..+ ..+.|...++++... ...++++|||.+|+++++.+|.+++++++..++..+
T Consensus 127 ~~p----~p~~~~~~l~~l~~~--~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~ 180 (206)
T 1rku_A 127 QLR----QKDPKRQSVIAFKSL--YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREF 180 (206)
T ss_dssp ECC----SSSHHHHHHHHHHHT--TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHC
T ss_pred ecC----CCchHHHHHHHHHhc--CCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHH
Confidence 522 346788888887443 456899999999999999999999998766655433
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=109.40 Aligned_cols=105 Identities=17% Similarity=0.136 Sum_probs=77.7
Q ss_pred CcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEe-CceeeeEEecC-CccccccHHHHHHH
Q 042288 117 LHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVY-KGRSTGFVKSP-GVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~-~G~~tG~i~~~-~~~~g~~K~~~l~~ 188 (515)
++|++ ++.++++| .++|+|+++...++.+++. +|++ +++++.+.+. +|.++|.-.+. .| .+..|.+.++.
T Consensus 87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~Kp~~~~~ 164 (225)
T 1nnl_A 87 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTA-ESGGKGKVIKL 164 (225)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGG-STTHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCccc-CCCchHHHHHH
Confidence 45554 45677899 5678999999999999998 9996 5888887664 67777754432 22 34578887776
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
.+...+...++++|||.+|+++.+.+|-++.++..
T Consensus 165 ~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~ 199 (225)
T 1nnl_A 165 LKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGN 199 (225)
T ss_dssp HHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSS
T ss_pred HHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCc
Confidence 65432234588999999999999999998888653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-09 Score=108.97 Aligned_cols=123 Identities=13% Similarity=0.068 Sum_probs=86.1
Q ss_pred cCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceee
Q 042288 94 AGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRST 168 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~t 168 (515)
.|++.+.+.+..++.-.. +.+ -.+++++.++++| .++|+||+....+++++++ +|++ +++++.+.++|+.++
T Consensus 124 ~gl~~~~~~~~v~~~~i~-l~~-g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~ 200 (297)
T 4fe3_A 124 QGIPKAKLKEIVADSDVM-LKE-GYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVL 200 (297)
T ss_dssp TTCBGGGHHHHHHTSCCC-BCB-THHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBE
T ss_pred cCccHHHHHHHHHhcCCC-CCC-cHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEccccee
Confidence 466666666555442111 111 2256667888999 7788999999999999999 9974 589999999999999
Q ss_pred eEEecCCccccccHHH------HHHHHhcCCCCCceEEEeCCcCcHHHHh---ccccceeeCC
Q 042288 169 GFVKSPGVLVGKNKAG------ALMKMLGDDEEMPDIGLGDRKTDSLFLN---LCKESYMVPP 222 (515)
Q Consensus 169 G~i~~~~~~~g~~K~~------~l~~~~~~~~~~~~~aygDS~~DlpmL~---~a~~~~~Vnp 222 (515)
+.+.++.. ....|.. .+.+.... .....+.|||.||.||++ .|+..+.+..
T Consensus 201 ~~~~~~~i-~~~~k~~~~~k~~~~~~~~~~--~~~v~~vGDGiNDa~m~k~l~~advgiaiGf 260 (297)
T 4fe3_A 201 KGFKGELI-HVFNKHDGALKNTDYFSQLKD--NSNIILLGDSQGDLRMADGVANVEHILKIGY 260 (297)
T ss_dssp EEECSSCC-CTTCHHHHHHTCHHHHHHTTT--CCEEEEEESSGGGGGTTTTCSCCSEEEEEEE
T ss_pred Eecccccc-chhhcccHHHHHHHHHHhhcc--CCEEEEEeCcHHHHHHHhCccccCeEEEEEe
Confidence 88887643 4444433 33333322 355778899999999954 7777777653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.4e-11 Score=110.64 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=67.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|++....++.++++ +|++ ++.. ...|.+.++.++...+ ...
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~~~--------------------~~~k~~~l~~~~~~~~~~~~~ 104 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VLHG--------------------IDRKDLALKQWCEEQGIAPER 104 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EEES--------------------CSCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eEeC--------------------CCChHHHHHHHHHHcCCCHHH
Confidence 788899999 5678999999999999998 9998 4332 1347777776655422 234
Q ss_pred eEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
++++|||.+|++|++.|+.++++ |+++.++..|.
T Consensus 105 ~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad 139 (176)
T 3mmz_A 105 VLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAAR 139 (176)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSS
T ss_pred EEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCC
Confidence 78999999999999999999999 45555555443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=101.17 Aligned_cols=105 Identities=10% Similarity=-0.017 Sum_probs=63.3
Q ss_pred CcHHHHHH---HHhCCCEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 117 LHPETWRV---FSSCGRRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 117 ~~~~~~~~---l~~~G~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+|.+.+. ++++|.++|+|+++...++.+.+. +|++ .++++.- .+... ...+-.+.+.+.
T Consensus 87 ~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~-----------~~~~K-p~~~~~~~~~~~ 153 (200)
T 3cnh_A 87 PRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSA-----------LGVMK-PNPAMYRLGLTL 153 (200)
T ss_dssp BCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHH-----------HSCCT-TCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecc-----------cCCCC-CCHHHHHHHHHH
Confidence 66777664 456774467899999999999997 8864 3333221 01000 011122233333
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccce-eeCCCCCCCcccccCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVPPNPKVDPVSQDKLPK 236 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp~~~l~~~A~~~~~W 236 (515)
++.. ...++++|||.+|+++.+.+|... .|+....++...+ +.||
T Consensus 154 ~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~-~~g~ 199 (200)
T 3cnh_A 154 AQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELA-ALGV 199 (200)
T ss_dssp HTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHH-HTTC
T ss_pred cCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHH-Hhcc
Confidence 4431 345789999999999999999664 4666554444444 4555
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-08 Score=95.27 Aligned_cols=104 Identities=11% Similarity=0.040 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHhchhhcCCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceee
Q 042288 97 KVPSIESVARAVLPKFYSGDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRST 168 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~t 168 (515)
+.+..+.+.+.+ . ....+|++ ++.++++| .++|+|.+....++.+.+. +|+ +.+++++.
T Consensus 81 ~~~~~~~~~~~~-~---~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-------- 147 (230)
T 3um9_A 81 DADGEAHLCSEY-L---SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDE-------- 147 (230)
T ss_dssp CHHHHHHHHHHT-T---SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGG--------
T ss_pred CHHHHHHHHHHH-h---cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhh--------
Confidence 455555544443 2 12244544 45677899 5577999999999999987 885 44444321
Q ss_pred eEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 169 GFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 169 G~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+..+..|.+.++..+...+ ...++++|||.+|+.|.+.+|..++.
T Consensus 148 -------~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 148 -------VRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCW 194 (230)
T ss_dssp -------TTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred -------cccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 1022223444444333211 24479999999999999999997764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.95 E-value=8.6e-10 Score=111.62 Aligned_cols=133 Identities=12% Similarity=0.026 Sum_probs=82.0
Q ss_pred HHcCCCHHHHHHHHHHHhch-hhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEeceEEEe-----
Q 042288 92 TFAGMKVPSIESVARAVLPK-FYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIGTEICVY----- 163 (515)
Q Consensus 92 ~~~G~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vigt~l~~~----- 163 (515)
...|....+..+. +.. ........++++.+++ | ...++|++...+++.+++. +++ +.+.++.+.++
T Consensus 85 ~~nGa~i~~~~~~----~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (332)
T 1y8a_A 85 AAAGVKNRDVERI----AELSAKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVRGELHGTEVDFDSIAVP 158 (332)
T ss_dssp HHTTCCHHHHHHH----HHHHCCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCCSEEEEEBCCGGGCCCC
T ss_pred EcCCcEEEECCeE----eeccCCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhhhhhcccccchhhhccc
Confidence 3567665543332 222 1222334567778888 9 4567899988899998887 887 66666543321
Q ss_pred -----------Cceee-------------------eEEec--CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHH
Q 042288 164 -----------KGRST-------------------GFVKS--PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFL 211 (515)
Q Consensus 164 -----------~G~~t-------------------G~i~~--~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL 211 (515)
++.++ +.+.. ..+ .+..|...++..-..++...++++|||.||++||
T Consensus 159 ~~~~k~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~-~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml 237 (332)
T 1y8a_A 159 EGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAV-GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMF 237 (332)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCC-CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHH
T ss_pred cccceeEEecCHHHHhhhhHHHHHHHHHHHhhcCCCceeeEEecC-CCCCHHHHHhccChhhcCceEEEEeCcHhHHHHH
Confidence 11111 11110 111 4667888887432210112389999999999999
Q ss_pred hcc----ccceeeCCCCCCCcccc
Q 042288 212 NLC----KESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 212 ~~a----~~~~~Vnp~~~l~~~A~ 231 (515)
+.| +.++++|+.+.++..|.
T Consensus 238 ~~A~~~~g~~vamna~~~lk~~Ad 261 (332)
T 1y8a_A 238 EAARGLGGVAIAFNGNEYALKHAD 261 (332)
T ss_dssp HHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHhhcCCeEEEecCCHHHHhhCc
Confidence 999 99999987777766554
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=5.4e-09 Score=98.21 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=72.7
Q ss_pred CCCHHHHHHHHHHHhchhhc-----CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEE
Q 042288 95 GMKVPSIESVARAVLPKFYS-----GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEIC 161 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~-----~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~ 161 (515)
|++.++++++.+.+...+.. ...+|.+. +.++++| .++|+|++....++.+.+. +|++ .+++++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~- 137 (226)
T 3mc1_A 60 NFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH-FKLAFYFDAIVGSSL- 137 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECT-
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCHhheeeeeccCC-
Confidence 88888877766655432211 23455554 4667788 5677999999999999998 8864 3333221
Q ss_pred EeCceeeeEEecCCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccce-eeC
Q 042288 162 VYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESY-MVP 221 (515)
Q Consensus 162 ~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~-~Vn 221 (515)
...+..|...++..+...+. ..++++|||.+|++|++.||... .|+
T Consensus 138 --------------~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 186 (226)
T 3mc1_A 138 --------------DGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVT 186 (226)
T ss_dssp --------------TSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEES
T ss_pred --------------CCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEc
Confidence 11344566666655443222 35799999999999999999744 354
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-09 Score=103.75 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=67.8
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .+.|+|+++...++.++++ +|++.++... ..|.+.++.++...+ ...
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~--------------------k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ--------------------SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC--------------------SSHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc--------------------CChHHHHHHHHHHcCcCcce
Confidence 788899999 5678999999999999998 9998655421 246666666554322 245
Q ss_pred eEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
++++|||.+|+++++.|+.++++.. .+.++..|.
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad 177 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAH 177 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCC
Confidence 7889999999999999999999865 444444443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-09 Score=99.89 Aligned_cols=89 Identities=9% Similarity=-0.018 Sum_probs=58.1
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH---HHHHHHHhc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK---AGALMKMLG 191 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K---~~~l~~~~~ 191 (515)
++++.++++| .++|+|++....++.+.+. +|++ .+++++- .+ .+..| .+.+.+.++
T Consensus 110 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-----------~~----~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 110 ELLDTLKENNITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGD-----------TG----TIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETS-----------SS----CCTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccc-----------cC----CCCCChHHHHHHHHHcC
Confidence 4555677899 5677999999999999998 8863 3333221 01 11112 233334444
Q ss_pred CCCCC-ceEEEeCCcCcHHHHhccc-cceeeCCCCC
Q 042288 192 DDEEM-PDIGLGDRKTDSLFLNLCK-ESYMVPPNPK 225 (515)
Q Consensus 192 ~~~~~-~~~aygDS~~DlpmL~~a~-~~~~Vnp~~~ 225 (515)
.. .. .++++|||.+|+.|.+.+| ..+++++...
T Consensus 174 i~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 174 IE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp CC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC---
T ss_pred CC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 32 33 5789999999999999999 5778876554
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=101.31 Aligned_cols=84 Identities=17% Similarity=0.160 Sum_probs=55.6
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
+.++.++++| .++|+|++....++.+.+. +|+ |.+++.+. +..+..|.+.++..+...+
T Consensus 111 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~---------------~~~~kp~~~~~~~~~~~lg 174 (237)
T 4ex6_A 111 EGLDRLSAAGFRLAMATSKVEKAARAIAEL-TGLDTRLTVIAGDDS---------------VERGKPHPDMALHVARGLG 174 (237)
T ss_dssp HHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HTGGGTCSEEECTTT---------------SSSCTTSSHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCchhheeeEEeCCC---------------CCCCCCCHHHHHHHHHHcC
Confidence 3445677889 5678999999999999998 886 33433321 1122333344444433211
Q ss_pred --CCceEEEeCCcCcHHHHhcccccee
Q 042288 195 --EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 195 --~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++++|||.+|++|++.||...+
T Consensus 175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i 201 (237)
T 4ex6_A 175 IPPERCVVIGDGVPDAEMGRAAGMTVI 201 (237)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 2457999999999999999998554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.86 E-value=6.3e-10 Score=103.34 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=67.2
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|+++...++.++++ +|+++++... ..|.+.++.++...+ ...
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~--------------------~~K~~~~~~~~~~~g~~~~~ 112 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR--------------------EDKLVVLDKLLAELQLGYEQ 112 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC--------------------SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc--------------------CChHHHHHHHHHHcCCChhH
Confidence 778899999 5678999999999999998 9998665531 346666666554322 234
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
++++|||.+|+++++.|+.++++. +.+.++..|
T Consensus 113 ~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~a 146 (189)
T 3mn1_A 113 VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146 (189)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTS
T ss_pred EEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhC
Confidence 788999999999999999999984 444444444
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.4e-08 Score=94.12 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceee
Q 042288 97 KVPSIESVARAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRST 168 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~t 168 (515)
+.++.+.+.+.+.. ...+|. +++.++++| .++|+|.++...++.+.+. +|+ |.+++++.
T Consensus 84 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-------- 150 (233)
T 3umb_A 84 GNHAEATLMREYAC----LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDA-------- 150 (233)
T ss_dssp CHHHHHHHHHHHHS----CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGG--------
T ss_pred CHHHHHHHHHHHhc----CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecc--------
Confidence 45555554444422 123444 455677899 6778999999999999997 885 44444321
Q ss_pred eEEecCCccccccHHHHHHHH---hcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 169 GFVKSPGVLVGKNKAGALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 169 G~i~~~~~~~g~~K~~~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+..+..|...++.. ++.. ...++++|||.+|+.|.+.+|..++.
T Consensus 151 -------~~~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 151 -------VRLYKTAPAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp -------TTCCTTSHHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred -------cCCCCcCHHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 10122233333333 3321 34579999999999999999998875
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-08 Score=97.40 Aligned_cols=89 Identities=15% Similarity=0.027 Sum_probs=57.9
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+. +.++++| .++|+|+++...++.+.+. +|++ .+++++. .+ .+..|.+.++.
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~ 169 (240)
T 2no4_A 106 AYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADD-----------LK----IYKPDPRIYQF 169 (240)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------TT----CCTTSHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccc-----------cC----CCCCCHHHHHH
Confidence 445544 4667889 5577999999999999998 8864 4444321 01 12223333333
Q ss_pred ---HhcCCCCCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 189 ---MLGDDEEMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 189 ---~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
.++.. ...++++|||.+|+++.+.+|..++ |+.
T Consensus 170 ~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v~~ 206 (240)
T 2no4_A 170 ACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRINR 206 (240)
T ss_dssp HHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred HHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 33331 2457899999999999999998765 444
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.82 E-value=3.9e-08 Score=92.43 Aligned_cols=110 Identities=12% Similarity=0.034 Sum_probs=67.2
Q ss_pred CCCHHHHHHHHHHHhchhhcCCCcHHH---HHHHHhCC-CEEEEecCc---HHHHHHHHHhhcCCc----EEEeceEEEe
Q 042288 95 GMKVPSIESVARAVLPKFYSGDLHPET---WRVFSSCG-RRCVLTANP---RIMVEAFLKDFLGAD----MVIGTEICVY 163 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~l~~~G-~~vivSaS~---~~~v~~ia~~~lGid----~vigt~l~~~ 163 (515)
|.+.++..++.+.+.........++.+ ++.++++| ..+++|++. ...++.+.+. +|++ .+++++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~--- 153 (235)
T 2om6_A 78 KVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADE--- 153 (235)
T ss_dssp TCCHHHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHH---
T ss_pred CCCHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccc---
Confidence 666555555555544322122235544 45667889 557789998 8888999887 8863 3333320
Q ss_pred CceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCc-CcHHHHhccccceee
Q 042288 164 KGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRK-TDSLFLNLCKESYMV 220 (515)
Q Consensus 164 ~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~-~DlpmL~~a~~~~~V 220 (515)
.+ .+..|.+.++..+...+ ...++++|||. ||++|++.||.+++.
T Consensus 154 --------~~----~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 154 --------VL----SYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp --------HT----CCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred --------cC----CCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 00 11223344444433322 24579999999 999999999999764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.82 E-value=8.5e-09 Score=95.31 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHhchhhc---CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe
Q 042288 95 GMKVPSIESVARAVLPKFYS---GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY 163 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~---~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~ 163 (515)
..+.+++.+..++++..... ...+|+ .++.++++| .++++|++....++.+.+. +|+ +.+++++-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~--- 140 (214)
T 3e58_A 65 KWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEE--- 140 (214)
T ss_dssp GSCHHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG---
T ss_pred CCCHHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeeccc---
Confidence 34556665555555443211 123444 445677899 5677999999999999998 886 34444321
Q ss_pred CceeeeEEecCCccccccHHH---HHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 164 KGRSTGFVKSPGVLVGKNKAG---ALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 164 ~G~~tG~i~~~~~~~g~~K~~---~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
.+ .+.-|.+ .+.+.++.. ...++++|||.+|++|.+.+|..++ ++.
T Consensus 141 --------~~----~~kp~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 141 --------FK----ESKPNPEIYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp --------CS----SCTTSSHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred --------cc----CCCCChHHHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 00 1111223 333334431 2457999999999999999998665 553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=97.22 Aligned_cols=113 Identities=18% Similarity=0.156 Sum_probs=72.8
Q ss_pred HcCCCHHHHHHHHHHHhchhhc-----CCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEece
Q 042288 93 FAGMKVPSIESVARAVLPKFYS-----GDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTE 159 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~-----~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~ 159 (515)
+.|++.++++++.+.+...+.. ...+|.+ ++.++++| .++|+|++....++.+.+. +|++ .+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~ 160 (240)
T 3sd7_A 82 YYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRY-FDIDRYFKYIAGSN 160 (240)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEEC
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-cCcHhhEEEEEecc
Confidence 3388888877776665443211 1244544 45677899 5677999999999999998 8864 333322
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCC---CCceEEEeCCcCcHHHHhcccc-ceeeC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---EMPDIGLGDRKTDSLFLNLCKE-SYMVP 221 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~~~~~aygDS~~DlpmL~~a~~-~~~Vn 221 (515)
. +..+..|.+.++..+...+ ...++++|||.+|++|++.+|. .+.|+
T Consensus 161 ~---------------~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 211 (240)
T 3sd7_A 161 L---------------DGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVL 211 (240)
T ss_dssp T---------------TSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred c---------------cCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence 1 1123345555555443322 2347899999999999999996 44455
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=95.60 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=68.6
Q ss_pred CCCHHHHHHHHHHHhchhh----cCCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEE
Q 042288 95 GMKVPSIESVARAVLPKFY----SGDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICV 162 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~----~~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~ 162 (515)
..+.++++++.+.+...+. ....++++ ++.++++| .++|+|++....++.+.+. +|++ .+++++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-- 142 (233)
T 3s6j_A 66 SITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA-LKLDINKINIVTRDD-- 142 (233)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECGGG--
T ss_pred CCCHHHHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHh-cchhhhhheeecccc--
Confidence 3556666666554433211 12244444 45677899 6788999999999999998 8864 3333321
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccc-ceeeC
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKE-SYMVP 221 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~-~~~Vn 221 (515)
.+ .+..|.+.++..+...+ ...++++|||.+|++|++.+|. .+.|.
T Consensus 143 ---------~~----~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 191 (233)
T 3s6j_A 143 ---------VS----YGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLL 191 (233)
T ss_dssp ---------SS----CCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEG
T ss_pred ---------CC----CCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEe
Confidence 01 23334455555544322 2347999999999999999998 44453
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.78 E-value=4.8e-08 Score=92.21 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=55.6
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHH---hc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM---LG 191 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~---~~ 191 (515)
+.++.++++| .++|+|+++...++.+.+. +|++ .+++++- .+ .+..|...++.. ++
T Consensus 102 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~~~~~~~ 165 (232)
T 1zrn_A 102 DSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDP-----------VQ----VYKPDNRVYELAEQALG 165 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGG-----------GT----CCTTSHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecc-----------cC----CCCCCHHHHHHHHHHcC
Confidence 4455677899 5577999999999999998 8863 4443321 00 122233333333 33
Q ss_pred CCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.. ...++++|||.+|+.+.+.+|..++.
T Consensus 166 ~~-~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 166 LD-RSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp SC-GGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred CC-cccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 21 24578999999999999999998664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-08 Score=98.26 Aligned_cols=112 Identities=9% Similarity=-0.054 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHhchhhcCCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----E-EEeceEEEeCce
Q 042288 96 MKVPSIESVARAVLPKFYSGDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----M-VIGTEICVYKGR 166 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~-vigt~l~~~~G~ 166 (515)
.+.+.++++.+.+....-....++++ ++.++++| .++|+|++....++.+.+. +|++ . +++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~------- 161 (259)
T 4eek_A 90 PPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRV-AGLTELAGEHIYDPS------- 161 (259)
T ss_dssp CCTTHHHHHHHHHHHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHH-TTCHHHHCSCEECGG-------
T ss_pred CCHHHHHHHHHHHHHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHh-cChHhhccceEEeHh-------
Confidence 45555665555443322122344544 45667788 6788999999999999998 8864 2 33321
Q ss_pred eeeEEecCCcc-ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccc-eeeCCC
Q 042288 167 STGFVKSPGVL-VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKES-YMVPPN 223 (515)
Q Consensus 167 ~tG~i~~~~~~-~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 223 (515)
.+. .+.-|.+.++..+...+ ...++++|||.+|+.|.+.+|.. ++|+..
T Consensus 162 --------~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g 214 (259)
T 4eek_A 162 --------WVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVP 214 (259)
T ss_dssp --------GGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred --------hcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence 110 11122334444433322 24479999999999999999997 667754
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=5.1e-09 Score=96.22 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=65.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EM 196 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~ 196 (515)
++++.++++| .++|+|+.+...+++++++ +|++.++.. +..|...++..+...+ ..
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~--------------------~k~k~~~~~~~~~~~~~~~~ 100 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG--------------------KLEKETACFDLMKQAGVTAE 100 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES--------------------CSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC--------------------CCCcHHHHHHHHHHcCCCHH
Confidence 5778888999 5678999999999999998 999864421 1236666555543211 24
Q ss_pred ceEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 197 PDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 197 ~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
.++++|||.+|++|++.++.++++. +.+.++..|
T Consensus 101 ~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~a 135 (180)
T 1k1e_A 101 QTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135 (180)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTS
T ss_pred HEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhC
Confidence 5789999999999999999999884 444444444
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.76 E-value=4e-09 Score=98.56 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=67.2
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|++....++.++++ +|+++++.. ...|...++.++...+ ...
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~--------------------~k~k~~~~~~~~~~~~~~~~~ 118 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQG--------------------QDDKVQAYYDICQKLAIAPEQ 118 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECS--------------------CSSHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeC--------------------CCCcHHHHHHHHHHhCCCHHH
Confidence 467888999 5678999999999999998 999865431 1236666666554322 234
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
++++|||.||++|++.|+.++++. ..+.++..|.
T Consensus 119 ~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad 153 (195)
T 3n07_A 119 TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRAN 153 (195)
T ss_dssp EEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCC
Confidence 789999999999999999999984 4555555554
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.9e-08 Score=90.98 Aligned_cols=85 Identities=19% Similarity=0.216 Sum_probs=54.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
+.++.++++| .++++|++....++.+.+. +|+. .+++++. .+ .+..|...++..+...+
T Consensus 96 ~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~----~~k~~~~~~~~~~~~~~ 159 (225)
T 3d6j_A 96 PTLTHLKKQGIRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGED-----------VT----HHKPDPEGLLLAIDRLK 159 (225)
T ss_dssp HHHHHHHHHTCEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGGG-----------CS----SCTTSTHHHHHHHHHTT
T ss_pred HHHHHHHHCCCeEEEEECCCHHHHHHHHHH-cCchhheeeeeehhh-----------cC----CCCCChHHHHHHHHHhC
Confidence 3445667788 4567899999999999987 8864 3333221 01 11222233333332221
Q ss_pred --CCceEEEeCCcCcHHHHhccccceee
Q 042288 195 --EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 195 --~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
...++++|||.+|++|++.+|.+++.
T Consensus 160 ~~~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 160 ACPEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred CChHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 23478999999999999999997654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.76 E-value=3e-08 Score=95.10 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=66.1
Q ss_pred cCCCHHHHHHHHHHHhchh---hc--CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceE
Q 042288 94 AGMKVPSIESVARAVLPKF---YS--GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEI 160 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~---~~--~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l 160 (515)
.+.+.++++++.+.+...+ .. ..++|.+. +.++++| .++|+|++....++.+.+. +|++ .+++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~- 164 (243)
T 2hsz_A 87 KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQ- 164 (243)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTT-
T ss_pred ccCCHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHH-cCchheEEEEEecc-
Confidence 3456666665555443321 11 12345444 4667889 4567999999999999998 8964 333221
Q ss_pred EEeCceeeeEEecCCccccccH--HHH---HHHHhcCCCCCceEEEeCCcCcHHHHhcccccee-eC
Q 042288 161 CVYKGRSTGFVKSPGVLVGKNK--AGA---LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM-VP 221 (515)
Q Consensus 161 ~~~~G~~tG~i~~~~~~~g~~K--~~~---l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~-Vn 221 (515)
. .+..| .+. +.+.++.. ...++++|||.+|++|++.+|..++ |+
T Consensus 165 --------------~--~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 214 (243)
T 2hsz_A 165 --------------S--LPEIKPHPAPFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT 214 (243)
T ss_dssp --------------T--SSSCTTSSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred --------------c--CCCCCcCHHHHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEc
Confidence 1 11122 222 22333431 2457899999999999999999854 54
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.8e-08 Score=93.33 Aligned_cols=97 Identities=9% Similarity=0.017 Sum_probs=61.5
Q ss_pred CCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCcccc--ccHHHHHHHH---
Q 042288 116 DLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVG--KNKAGALMKM--- 189 (515)
Q Consensus 116 ~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g--~~K~~~l~~~--- 189 (515)
..++++.+.++.-. .++|+|.+....++.+.++ +|++..+.. ..+++...+ .+ ..|...++..
T Consensus 87 ~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~l~~~~~~------~~~~~~~~~----~~~~kpk~~~~~~~~~~ 155 (229)
T 2fdr_A 87 KIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAP------HIYSAKDLG----ADRVKPKPDIFLHGAAQ 155 (229)
T ss_dssp CBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTT------CEEEHHHHC----TTCCTTSSHHHHHHHHH
T ss_pred ccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHh-CChHHhccc------eEEeccccc----cCCCCcCHHHHHHHHHH
Confidence 35677777777543 6778999999999999998 886422211 111111111 12 2343444433
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccc-eeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~ 224 (515)
++.. ...++++|||.+|++|++.+|.. ++++...
T Consensus 156 l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~ 190 (229)
T 2fdr_A 156 FGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGAS 190 (229)
T ss_dssp HTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred cCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecCC
Confidence 3431 24579999999999999999997 6777644
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.2e-08 Score=93.43 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=54.9
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccH--HHHHHHH---hcCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALMKM---LGDD 193 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~~~---~~~~ 193 (515)
+.++.++++| .++++|++....++.+.+. +|++..+.. .+++. . .+..| ...++.. ++..
T Consensus 101 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~-------~~~~~----~--~~~~kp~~~~~~~~~~~~~i~ 166 (226)
T 1te2_A 101 EAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDA-------LASAE----K--LPYSKPHPQVYLDCAAKLGVD 166 (226)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSE-------EEECT----T--SSCCTTSTHHHHHHHHHHTSC
T ss_pred HHHHHHHHCCCcEEEEeCCcHHHHHHHHHh-cCcHhhCcE-------EEecc----c--cCCCCCChHHHHHHHHHcCCC
Confidence 3445677888 5567999999999999987 886422111 11110 0 11222 3333333 3431
Q ss_pred CCCceEEEeCCcCcHHHHhccccceee
Q 042288 194 EEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 194 ~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
...++++|||.||++|++.||.+++.
T Consensus 167 -~~~~i~iGD~~nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 167 -PLTCVALEDSVNGMIASKAARMRSIV 192 (226)
T ss_dssp -GGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred -HHHeEEEeCCHHHHHHHHHcCCEEEE
Confidence 24579999999999999999998775
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2.6e-08 Score=92.47 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=62.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EM 196 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~ 196 (515)
++++.++++| .++|+|++....++.+.+. +|++..+... ..+++.. + .+.-|...++..+...+ ..
T Consensus 77 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~-----~i~~~~~-~----~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 77 ELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEA-----DVLGRDE-A----PPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGG-----GEECTTT-S----CCTTSSHHHHHHHHHTTCCGG
T ss_pred HHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcc-----eEEeCCC-C----CCCCCHHHHHHHHHHcCCCHH
Confidence 4556777899 5677999999999999998 8974322111 0111100 0 12223344444443322 24
Q ss_pred ceEEEeCCcCcHHHHhcccc-ceeeCC-CCCCCccc
Q 042288 197 PDIGLGDRKTDSLFLNLCKE-SYMVPP-NPKVDPVS 230 (515)
Q Consensus 197 ~~~aygDS~~DlpmL~~a~~-~~~Vnp-~~~l~~~A 230 (515)
.++++|||.+|++|.+.+|. .++++. ...++..|
T Consensus 146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~a 181 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELT 181 (205)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGC
T ss_pred HEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccC
Confidence 47999999999999999998 888865 33444443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-08 Score=93.33 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=57.6
Q ss_pred CCcHHHHHHHHh-CC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 116 DLHPETWRVFSS-CG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 116 ~~~~~~~~~l~~-~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
..+|.+.+.++. +| .++|+|+++...++.+.+. +|++ .+++++. .+ .+.-|...++..
T Consensus 93 ~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~~ 156 (253)
T 1qq5_A 93 TPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDA-----------KR----VFKPHPDSYALV 156 (253)
T ss_dssp CBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------GT----CCTTSHHHHHHH
T ss_pred CCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccc-----------cC----CCCCCHHHHHHH
Confidence 456666664442 28 5577999999999999998 8864 3333321 01 122233343333
Q ss_pred ---hcCCCCCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 190 ---LGDDEEMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 190 ---~~~~~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
++.. ...++++|||.+|+.+.+.+|..++ +|.
T Consensus 157 ~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 157 EEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp HHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred HHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 3321 2457899999999999999998865 554
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.72 E-value=6.5e-09 Score=93.41 Aligned_cols=91 Identities=15% Similarity=0.099 Sum_probs=63.5
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--C
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--E 195 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~ 195 (515)
.++++.++++| .++|+|+++...++.++++ +|++..+.. +..|.+.++..+...+ .
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~--------------------~kp~~~~~~~~~~~~~~~~ 100 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG--------------------SYKKLEIYEKIKEKYSLKD 100 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC--------------------C--CHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC--------------------CCCCHHHHHHHHHHcCCCH
Confidence 36777888899 5677999999999999998 999854421 1124444444433221 2
Q ss_pred CceEEEeCCcCcHHHHhccccceee-CCCCCCCccc
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVS 230 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A 230 (515)
..++++|||.+|+++++.++.++++ |+.+.++..|
T Consensus 101 ~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a 136 (162)
T 2p9j_A 101 EEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVA 136 (162)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhC
Confidence 3478999999999999999999887 4444444433
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=8.2e-08 Score=93.35 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=65.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCce
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD 198 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~ 198 (515)
++++.++++| .+.|+|+++...++.+++. +|++..+. .+ .+.+|+..++..... ..+
T Consensus 151 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~-----------------~~-~~~~k~~~~k~~~~~---~~~ 208 (280)
T 3skx_A 151 EAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFA-----------------EV-LPHEKAEKVKEVQQK---YVT 208 (280)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEEC-----------------SC-CGGGHHHHHHHHHTT---SCE
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhH-----------------hc-CHHHHHHHHHHHHhc---CCE
Confidence 4455677889 5677999999999999998 99875432 12 466899999988764 467
Q ss_pred EEEeCCcCcHHHHhccccceeeCC
Q 042288 199 IGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+++|||.||++|++.||.++++..
T Consensus 209 ~~vGD~~nDi~~~~~Ag~~va~~~ 232 (280)
T 3skx_A 209 AMVGDGVNDAPALAQADVGIAIGA 232 (280)
T ss_dssp EEEECTTTTHHHHHHSSEEEECSC
T ss_pred EEEeCCchhHHHHHhCCceEEecC
Confidence 899999999999999999998854
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-07 Score=91.79 Aligned_cols=111 Identities=12% Similarity=-0.090 Sum_probs=67.1
Q ss_pred CCCHHHHHHHHHHHhchh---h--cCCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-----cEEEeceE
Q 042288 95 GMKVPSIESVARAVLPKF---Y--SGDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-----DMVIGTEI 160 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~--~~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-----d~vigt~l 160 (515)
..+.++++++.+.+...+ + ....++.+ ++.++++| .++|+|.+....++.+.+. +|+ |.+++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 163 (277)
T 3iru_A 85 ASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVFATD 163 (277)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEecHHh
Confidence 456666666665543321 1 12344544 45677899 5677999999888888886 663 44444321
Q ss_pred EEeCceeeeEEecCCccccccHHH---HHHHHhcCCCC-CceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 161 CVYKGRSTGFVKSPGVLVGKNKAG---ALMKMLGDDEE-MPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 161 ~~~~G~~tG~i~~~~~~~g~~K~~---~l~~~~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
.+ .+.-|.. .+.+.++.. . ..++++|||.+|+.|.+.+|.. +.|+.
T Consensus 164 -----------~~----~~kp~~~~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~ 214 (277)
T 3iru_A 164 -----------VV----RGRPFPDMALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSC 214 (277)
T ss_dssp -----------SS----SCTTSSHHHHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECS
T ss_pred -----------cC----CCCCCHHHHHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 00 2222333 333444442 3 4579999999999999999976 44554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-07 Score=92.18 Aligned_cols=119 Identities=11% Similarity=-0.006 Sum_probs=72.6
Q ss_pred cCCCHHHHHHHHHHHhchhhcCCCcHHHHH---HHHhCCC--E-EEEecCcHHHHHHHHHhhcCCc----EEEeceEEEe
Q 042288 94 AGMKVPSIESVARAVLPKFYSGDLHPETWR---VFSSCGR--R-CVLTANPRIMVEAFLKDFLGAD----MVIGTEICVY 163 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~G~--~-vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~ 163 (515)
.|.+.+++.+..+++.+..-....+|.+.+ .++++|. . +|+|.+....++.+.+. +|++ .+++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~--- 195 (282)
T 3nuq_A 120 HKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDY--- 195 (282)
T ss_dssp TSSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCC---
T ss_pred cCCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEecc---
Confidence 466777777665555432112335666655 5667887 6 56899999999999997 8864 3443321
Q ss_pred CceeeeEEecCCccccccHHHHHHHHhcCCC--C-CceEEEeCCcCcHHHHhccccc-eeeCCCC
Q 042288 164 KGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--E-MPDIGLGDRKTDSLFLNLCKES-YMVPPNP 224 (515)
Q Consensus 164 ~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~ 224 (515)
.+..+..+.-|.+.++..+...+ . ..++++|||.+|+.|.+.+|.. ++.+...
T Consensus 196 --------~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~ 252 (282)
T 3nuq_A 196 --------SRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVEN 252 (282)
T ss_dssp --------SSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSC
T ss_pred --------CCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCC
Confidence 11110123345555554433222 3 4579999999999999999994 4444433
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-07 Score=85.77 Aligned_cols=96 Identities=13% Similarity=0.045 Sum_probs=55.1
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+. +.++++| .++++|++.. .++.+.+. +|++..+.. .+++...+ .+..|...++..+..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~-------~~~~~~~~----~~kp~~~~~~~~~~~ 149 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTE-------VVTSSSGF----KRKPNPESMLYLREK 149 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEE-------EECGGGCC----CCTTSCHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheee-------eeeccccC----CCCCCHHHHHHHHHH
Confidence 445444 4667889 5567898765 67888887 886421110 11110001 122233333333322
Q ss_pred CCCCceEEEeCCcCcHHHHhccccce-eeCCCCC
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESY-MVPPNPK 225 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp~~~ 225 (515)
.+...++++|||.+|++|++.+|..+ .++....
T Consensus 150 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 150 YQISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVN 183 (190)
T ss_dssp TTCSSEEEEESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred cCCCeEEEEcCCHHHHHHHHHcCCeEEEECCCCC
Confidence 11126899999999999999999764 4665443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5.4e-08 Score=91.89 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=58.2
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+.+ .++++| .++|+|++....++.+.+. +|+ +.+++++- .+ .+..|.+.++.
T Consensus 84 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-----------~~----~~Kp~~~~~~~ 147 (222)
T 2nyv_A 84 PYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDT-----------FG----EKKPSPTPVLK 147 (222)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTS-----------SC----TTCCTTHHHHH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCc-----------CC----CCCCChHHHHH
Confidence 4555554 566789 5578999999999999998 885 34444331 01 11123333333
Q ss_pred ---HhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 189 ---MLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 189 ---~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
.++.. ...++++|||.+|+++.+.+|.. ++|+.
T Consensus 148 ~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 184 (222)
T 2nyv_A 148 TLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALW 184 (222)
T ss_dssp HHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred HHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 33331 24578999999999999999988 66654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.6e-08 Score=99.68 Aligned_cols=107 Identities=13% Similarity=0.117 Sum_probs=67.2
Q ss_pred HHHHHHHhC-C-CEEEEecC---------------------cHHHHHHHHHhhcCCcEEEece-EEE--eCceeeeEEec
Q 042288 120 ETWRVFSSC-G-RRCVLTAN---------------------PRIMVEAFLKDFLGADMVIGTE-ICV--YKGRSTGFVKS 173 (515)
Q Consensus 120 ~~~~~l~~~-G-~~vivSaS---------------------~~~~v~~ia~~~lGid~vigt~-l~~--~~G~~tG~i~~ 173 (515)
++++.++++ | +..+.|.+ ....++.+.+. +|++..+.+- ... .+|.+++.+..
T Consensus 129 e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (289)
T 3gyg_A 129 KLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDSYDVDFIP 207 (289)
T ss_dssp HHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTEEEEEEEE
T ss_pred HHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCceEEEEEe
Confidence 444556655 8 45566665 45666777777 7876433321 000 01445565554
Q ss_pred CCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 174 PGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
.+..|...++..+...+. ..++++|||.||++|++.|+.++++. .++.++..|.
T Consensus 208 ----~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~ 264 (289)
T 3gyg_A 208 ----IGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHN 264 (289)
T ss_dssp ----SCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCC
T ss_pred ----CCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCC
Confidence 345677777776554222 34799999999999999999999994 4555655443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.4e-08 Score=89.91 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHhchhh----cCCCcHHHHHHHH---hCCCE-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCce
Q 042288 95 GMKVPSIESVARAVLPKFY----SGDLHPETWRVFS---SCGRR-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGR 166 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~l~---~~G~~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~ 166 (515)
|.+.+++.+..+++..... ....+|.+.+.++ ++ .. +|+|+++...++.+.+. +|++..+.. .
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~-------~ 128 (209)
T 2hdo_A 58 GIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRS-YPFMMRMAV-------T 128 (209)
T ss_dssp TCCGGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTT-SGGGGGEEE-------E
T ss_pred CCCHHHHHHHHHHHHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHH-cChHhhccE-------E
Confidence 5665566555555544321 1235666666655 34 54 56899999999999998 887422211 1
Q ss_pred eeeEEecCCccccccH--HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 167 STGFVKSPGVLVGKNK--AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K--~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
++ ... .+..| .+.++..+...+ ...++++|||.+|++|.+.+|.+++.
T Consensus 129 ~~----~~~--~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~ 180 (209)
T 2hdo_A 129 IS----ADD--TPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 180 (209)
T ss_dssp EC----GGG--SSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred Ee----cCc--CCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEE
Confidence 11 111 23345 444444333221 24478999999999999999998763
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=9.2e-07 Score=83.18 Aligned_cols=92 Identities=15% Similarity=0.077 Sum_probs=60.1
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|++.+ .++ +| .++|+|.++...++.+.+. +|++ .+++++. +..+..|...++.
T Consensus 108 ~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~---------------~~~~kp~~~~~~~ 170 (240)
T 3qnm_A 108 LMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRS-AGVDRYFKKIILSED---------------LGVLKPRPEIFHF 170 (240)
T ss_dssp BSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGG---------------TTCCTTSHHHHHH
T ss_pred cCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHH-cChHhhceeEEEecc---------------CCCCCCCHHHHHH
Confidence 4555554 555 78 5577999999999999987 8863 3333321 1123334555555
Q ss_pred HhcCCC--CCceEEEeCCc-CcHHHHhcccccee-eCCCCC
Q 042288 189 MLGDDE--EMPDIGLGDRK-TDSLFLNLCKESYM-VPPNPK 225 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~-~DlpmL~~a~~~~~-Vnp~~~ 225 (515)
.+...+ ...++++|||. +|+.|.+.+|..++ +|....
T Consensus 171 ~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~ 211 (240)
T 3qnm_A 171 ALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER 211 (240)
T ss_dssp HHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred HHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence 544322 23479999995 99999999999765 666553
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.9e-08 Score=88.41 Aligned_cols=89 Identities=15% Similarity=0.036 Sum_probs=65.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|+++...++.++++ +|++.++... ..|.+.++..+...+ ...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~--------------------kpk~~~~~~~~~~~~~~~~~ 97 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV--------------------VDKLSAAEELCNELGINLEQ 97 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC--------------------SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc--------------------CChHHHHHHHHHHcCCCHHH
Confidence 678889999 6788999999999999998 9998655431 125555554443321 235
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
++++|||.+|+++++.++.++++. ..+.++..|
T Consensus 98 ~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~a 131 (164)
T 3e8m_A 98 VAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLS 131 (164)
T ss_dssp EEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTC
T ss_pred EEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhC
Confidence 788999999999999999999984 444444444
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-07 Score=89.73 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=56.5
Q ss_pred CcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHH-
Q 042288 117 LHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM- 187 (515)
Q Consensus 117 ~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~- 187 (515)
.+|.+ ++.++++| ..+|+|++...+++.+.+. +|++ .+++++. .+ .+.-|.+.++
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~ 158 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDF-----------EG----VKKPHPKIFKK 158 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------GT----CCTTCHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCC-----------CC----CCCCCHHHHHH
Confidence 44554 45667789 5577999999999999998 8864 3333221 11 1122223333
Q ss_pred --HHhcCCCCCceEEEeCCc-CcHHHHhccccceee
Q 042288 188 --KMLGDDEEMPDIGLGDRK-TDSLFLNLCKESYMV 220 (515)
Q Consensus 188 --~~~~~~~~~~~~aygDS~-~DlpmL~~a~~~~~V 220 (515)
+.++.. ...++++|||. +|++|.+.||..++.
T Consensus 159 ~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 159 ALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp HHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence 334431 24579999998 999999999998653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-06 Score=81.91 Aligned_cols=90 Identities=13% Similarity=-0.009 Sum_probs=59.5
Q ss_pred CcHHHHH---HHHhCCCE-EEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCGRR-CVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~~-vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+.+ .++++ .. +|+|.+....++...+. +|++ .+++++- +..+.-|...++.
T Consensus 104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~---------------~~~~kp~~~~~~~ 166 (238)
T 3ed5_A 104 LIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD-SGLFPFFKDIFVSED---------------TGFQKPMKEYFNY 166 (238)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGG---------------TTSCTTCHHHHHH
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH-cChHhhhheEEEecc---------------cCCCCCChHHHHH
Confidence 4555554 55556 54 56899999999999887 8864 3333221 1123334566666
Q ss_pred HhcCCC-C--CceEEEeCCc-CcHHHHhcccc-ceeeCCC
Q 042288 189 MLGDDE-E--MPDIGLGDRK-TDSLFLNLCKE-SYMVPPN 223 (515)
Q Consensus 189 ~~~~~~-~--~~~~aygDS~-~DlpmL~~a~~-~~~Vnp~ 223 (515)
.+...+ . ..++++|||. +|+.|.+.+|. .+.++..
T Consensus 167 ~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~ 206 (238)
T 3ed5_A 167 VFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPD 206 (238)
T ss_dssp HHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred HHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence 655433 2 3479999998 99999999998 5667764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=8.1e-08 Score=91.96 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhchhh-cCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcC----CcEEEeceEEEeCc
Q 042288 95 GMKVPSIESVARAVLPKFY-SGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLG----ADMVIGTEICVYKG 165 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~-~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lG----id~vigt~l~~~~G 165 (515)
..+.+++.+...+.+...+ ....++. +++.++++| ..+|+|.+....++....+++| +|.+++++-
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~----- 164 (250)
T 3l5k_A 90 PMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDD----- 164 (250)
T ss_dssp SSCHHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTC-----
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecch-----
Confidence 3455666555554443322 1234454 445677899 6788999987666654432134 344444320
Q ss_pred eeeeEEecCCccccccHHHHHHHHhcCCC--C--CceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 166 RSTGFVKSPGVLVGKNKAGALMKMLGDDE--E--MPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 166 ~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~--~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
..+..+.-|.+.++..+...+ . ..++++|||.+|+.|.+.+|...+ |+.
T Consensus 165 --------~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 218 (250)
T 3l5k_A 165 --------PEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPD 218 (250)
T ss_dssp --------TTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred --------hhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 001022223344555444332 2 457999999999999999996644 443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.7e-07 Score=86.27 Aligned_cols=111 Identities=10% Similarity=-0.004 Sum_probs=67.3
Q ss_pred CCHHHHHHHHHHHhchhhcCCCcHHHHHHHH---hCCCEEEEecCcHHHHHHHH------HhhcCC----cEEEeceEEE
Q 042288 96 MKVPSIESVARAVLPKFYSGDLHPETWRVFS---SCGRRCVLTANPRIMVEAFL------KDFLGA----DMVIGTEICV 162 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~vivSaS~~~~v~~ia------~~~lGi----d~vigt~l~~ 162 (515)
.+.+++.+..+++. ..++|++.+.++ ++-.++|+|.+....++.+. +. +|+ |.+++++-
T Consensus 97 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~-- 168 (229)
T 4dcc_A 97 VSDKQIDAAWNSFL-----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYE-- 168 (229)
T ss_dssp CCHHHHHHHHHTTB-----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHH--
T ss_pred CCHHHHHHHHHHHH-----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecc--
Confidence 45666655444332 235677766554 44234678999999998776 44 564 44444431
Q ss_pred eCceeeeEEecCCccccccHH--HHHHH---HhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCCCCCCCccc
Q 042288 163 YKGRSTGFVKSPGVLVGKNKA--GALMK---MLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPPNPKVDPVS 230 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~--~~l~~---~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~~l~~~A 230 (515)
.+..|. +.++. .++.. ...++++|||.+|+.+.+.+|-. +.||+...++..-
T Consensus 169 ---------------~~~~KP~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 169 ---------------MKMAKPEPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp ---------------HTCCTTCHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred ---------------cCCCCCCHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 112222 33333 33431 34578999999999999999965 5678877776543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-07 Score=87.60 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHHhchhh-cCCCcHHH---HHHHHhCC-CE-EEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeC
Q 042288 95 GMKVPSIESVARAVLPKFY-SGDLHPET---WRVFSSCG-RR-CVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYK 164 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~-~~~~~~~~---~~~l~~~G-~~-vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~ 164 (515)
..+.+.++++.+.+..... ....+|.+ ++.++++| .. +++|.+....++.+.+. +|++ .+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~------ 155 (234)
T 3ddh_A 83 KIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIEVM------ 155 (234)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEEEE------
T ss_pred CCCHHHHHHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheeeec------
Confidence 4566677766655443221 11244544 45667788 65 56899998888998887 8863 33321
Q ss_pred ceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCc-CcHHHHhccccceee
Q 042288 165 GRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRK-TDSLFLNLCKESYMV 220 (515)
Q Consensus 165 G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~-~DlpmL~~a~~~~~V 220 (515)
+..|...++..+...+ ...++++|||. +|+.|.+.+|..++.
T Consensus 156 --------------~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~ 200 (234)
T 3ddh_A 156 --------------SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVH 200 (234)
T ss_dssp --------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEE
T ss_pred --------------CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEE
Confidence 1124444444433221 24479999996 999999999987764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=89.44 Aligned_cols=117 Identities=8% Similarity=-0.024 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHHHhc---hhhcC----CCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEece
Q 042288 95 GMKVPSIESVARAVLP---KFYSG----DLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTE 159 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~---~~~~~----~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~ 159 (515)
..+.++++++.+.+.. +.+.. .++|.+ ++.++++| ..+|+|.+.. ++.+.+. +|+ +.+++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~~ 140 (233)
T 3nas_A 64 KYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRR-LAIIDDFHAIVDPT 140 (233)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeHh
Confidence 4566666665544322 21111 145544 45667899 4567888755 7788887 886 4444432
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee-CCCCCCC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVD 227 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~ 227 (515)
-. +. +. . .. +=.+.+.+.++.. ...++++|||.+|+.|.+.||..++. |....++
T Consensus 141 ~~-------~~--~K-p-~~-~~~~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~ 196 (233)
T 3nas_A 141 TL-------AK--GK-P-DP-DIFLTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML 196 (233)
T ss_dssp -------------------C-CHHHHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC------
T ss_pred hC-------CC--CC-C-Ch-HHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc
Confidence 10 00 00 0 11 1122333334431 34579999999999999999997764 5444443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.60 E-value=2e-07 Score=87.67 Aligned_cols=90 Identities=19% Similarity=0.018 Sum_probs=56.7
Q ss_pred HHHHHHHhC-C-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCc-cccccHHHH---HHHHhc--
Q 042288 120 ETWRVFSSC-G-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGV-LVGKNKAGA---LMKMLG-- 191 (515)
Q Consensus 120 ~~~~~l~~~-G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~-~~g~~K~~~---l~~~~~-- 191 (515)
++++.++++ | ...|+|++...+++.+.+. +|++..+.. ..++ ... ..+.-+... +.+.++
T Consensus 100 ~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~-------~~~~----~~~~~~~k~~~~~~~~~~~~lg~~ 167 (234)
T 2hcf_A 100 ELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPF-------GAFA----DDALDRNELPHIALERARRMTGAN 167 (234)
T ss_dssp HHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSC-------EECT----TTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCc-------ceec----CCCcCccchHHHHHHHHHHHhCCC
Confidence 344566778 8 5678999999999999998 887533321 1111 111 011112233 333344
Q ss_pred CCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
. ....++++|||.+|++|++.||.+ +.|..
T Consensus 168 ~-~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 168 Y-SPSQIVIIGDTEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp C-CGGGEEEEESSHHHHHHHHTTTCEEEEECC
T ss_pred C-CcccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence 2 134589999999999999999988 55654
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.59 E-value=6.8e-08 Score=89.77 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=58.6
Q ss_pred CcHHHHHHH---HhCC-CEEEEecCcHHHHHHHHHhh-----cCC----cEEEeceEEEeCceeeeEEecCCccccccHH
Q 042288 117 LHPETWRVF---SSCG-RRCVLTANPRIMVEAFLKDF-----LGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA 183 (515)
Q Consensus 117 ~~~~~~~~l---~~~G-~~vivSaS~~~~v~~ia~~~-----lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~ 183 (515)
.+|.+.+.+ ++ | .++|+|+++...++.+.+.+ +|+ |.+++++- .+ .+..+.
T Consensus 90 ~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~-----------~~----~~Kp~~ 153 (211)
T 2i6x_A 90 ISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQ-----------MG----KYKPNE 153 (211)
T ss_dssp ECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHH-----------HT----CCTTSH
T ss_pred cChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecc-----------cC----CCCCCH
Confidence 456666644 45 8 56779999999998887741 364 44444321 01 111122
Q ss_pred HH---HHHHhcCCCCCceEEEeCCcCcHHHHhccccce-eeCCCCCCCc
Q 042288 184 GA---LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVPPNPKVDP 228 (515)
Q Consensus 184 ~~---l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp~~~l~~ 228 (515)
+. +.+.++.. ...++++|||.+|++|.+.+|..+ .+|....++.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~ 201 (211)
T 2i6x_A 154 DIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPDNGENWIP 201 (211)
T ss_dssp HHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHH
T ss_pred HHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 23 33334431 345799999999999999999654 4677666654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=7.3e-08 Score=88.27 Aligned_cols=83 Identities=18% Similarity=0.147 Sum_probs=54.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH--H---HHHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--A---GALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~---~~l~~~ 189 (515)
+.++.++++| ..+++|++....++ ..+. +|++ .+++++- .+..| . +.+.+.
T Consensus 92 ~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~-----------------~~~~Kp~~~~~~~~~~~ 152 (207)
T 2go7_A 92 EVLAWADESGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQS-----------------GFVRKPSPEAATYLLDK 152 (207)
T ss_dssp HHHHHHHHTTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGG-----------------CCCCTTSSHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCc-----------------CCCCCCCcHHHHHHHHH
Confidence 4445677889 55779999888888 8887 8864 2333220 11122 2 233334
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
++.. ...++++|||.+|++|++.+|.+ ++++.
T Consensus 153 ~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~~ 185 (207)
T 2go7_A 153 YQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLE 185 (207)
T ss_dssp HTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSC
T ss_pred hCCC-cccEEEECCCHHHHHHHHHCCCeEEEEec
Confidence 4431 34579999999999999999997 66654
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=90.08 Aligned_cols=91 Identities=18% Similarity=-0.045 Sum_probs=54.5
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH---hcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM---LGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~---~~~~~~ 195 (515)
+.++.++++| ..+++|++....++.+.+. +|++..+. +..+++...+ .+..|...++.. ++.. .
T Consensus 110 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~------~~~~~~~~~~----~~kp~~~~~~~~~~~lgi~-~ 177 (267)
T 1swv_A 110 EVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKP------DFLVTPDDVP----AGRPYPWMCYKNAMELGVY-P 177 (267)
T ss_dssp HHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCC------SCCBCGGGSS----CCTTSSHHHHHHHHHHTCC-S
T ss_pred HHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCcccCh------HheecCCccC----CCCCCHHHHHHHHHHhCCC-C
Confidence 3445667889 4567899998888888887 66432111 1112211111 122233333333 4431 3
Q ss_pred -CceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 196 -MPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 196 -~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
..++++|||.||++|++.||.+ +.|+.
T Consensus 178 ~~~~i~iGD~~nDi~~a~~aG~~~i~v~~ 206 (267)
T 1swv_A 178 MNHMIKVGDTVSDMKEGRNAGMWTVGVIL 206 (267)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEEEECT
T ss_pred CcCEEEEeCCHHHHHHHHHCCCEEEEEcC
Confidence 4589999999999999999975 44554
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.4e-07 Score=86.24 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=54.5
Q ss_pred CcHHHH---HHHHhCCC-EEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETW---RVFSSCGR-RCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~---~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.++.+. +.++++|. .+++|++ ..++.+.+. +|+. .+++++ ..+ .+..|.+.++.
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~-----------~~~----~~Kp~~~~~~~ 153 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLER-MNLTGYFDAIADPA-----------EVA----ASKPAPDIFIA 153 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHH-TTCGGGCSEECCTT-----------TSS----SCTTSSHHHHH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHH-cChHHHcceEeccc-----------cCC----CCCCChHHHHH
Confidence 345444 46667894 5678887 345777777 7853 222221 001 11122224443
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee-eCCCCCCC
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM-VPPNPKVD 227 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vnp~~~l~ 227 (515)
.+...+ ...++++|||.||++|++.||.+++ +|..+.++
T Consensus 154 ~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~ 195 (221)
T 2wf7_A 154 AAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG 195 (221)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC
T ss_pred HHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc
Confidence 333221 2457999999999999999998876 46544443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-08 Score=91.81 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=56.2
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC----CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+.+ .++++| .++|+|+++...++.+.+..+| +|.++++.- .+..- ...+-.+.+.+
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~-----------~~~~K-p~~~~~~~~~~ 159 (206)
T 2b0c_A 92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQD-----------LGMRK-PEARIYQHVLQ 159 (206)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHH-----------HTCCT-TCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecc-----------cCCCC-CCHHHHHHHHH
Confidence 4566655 556789 5677999887776554442133 355554431 01000 01111223333
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCCCCCCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPPNPKVD 227 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~~l~ 227 (515)
.++.. ...++++|||.+|+++.+.+|.. +.++....++
T Consensus 160 ~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~ 198 (206)
T 2b0c_A 160 AEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIP 198 (206)
T ss_dssp HHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHH
T ss_pred HcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHH
Confidence 34431 34578999999999999999965 5567665543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1e-07 Score=88.04 Aligned_cols=87 Identities=20% Similarity=0.135 Sum_probs=63.2
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|+++...++.++++ +|++.++.. +..|...++.++...+ ...
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~--------------------~kpk~~~~~~~~~~~g~~~~~ 119 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG--------------------QSNKLIAFSDLLEKLAIAPEN 119 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS--------------------CSCSHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC--------------------CCCCHHHHHHHHHHcCCCHHH
Confidence 678888999 5678999999999999998 999865532 1224454444433211 235
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDP 228 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~ 228 (515)
++++|||.+|+++++.++.++++. ..+.++.
T Consensus 120 ~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~ 151 (188)
T 2r8e_A 120 VAYVGDDLIDWPVMEKVGLSVAVADAHPLLIP 151 (188)
T ss_dssp EEEEESSGGGHHHHTTSSEEEECTTSCTTTGG
T ss_pred EEEECCCHHHHHHHHHCCCEEEecCcCHHHHh
Confidence 788999999999999999999885 3444443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.7e-07 Score=87.10 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=54.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC---cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH---hcC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA---DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM---LGD 192 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi---d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~---~~~ 192 (515)
++++.++++| ...|+|.++...++.+.+. +|+ |.+++++. +..+.-|.+.++.. ++-
T Consensus 117 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~f~~~~~~~~---------------~~~~Kp~p~~~~~~~~~l~~ 180 (240)
T 2hi0_A 117 DLMKNLRQKGVKLAVVSNKPNEAVQVLVEE-LFPGSFDFALGEKS---------------GIRRKPAPDMTSECVKVLGV 180 (240)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HSTTTCSEEEEECT---------------TSCCTTSSHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCcceeEEEecCC---------------CCCCCCCHHHHHHHHHHcCC
Confidence 3445667889 4568999999889999887 775 44443321 00122233333333 333
Q ss_pred CCCCceEEEeCCcCcHHHHhccccce-eeC
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESY-MVP 221 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~-~Vn 221 (515)
. ...++++|||.+|+.+.+.||... .|+
T Consensus 181 ~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~ 209 (240)
T 2hi0_A 181 P-RDKCVYIGDSEIDIQTARNSEMDEIAVN 209 (240)
T ss_dssp C-GGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred C-HHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 1 345899999999999999999854 354
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.52 E-value=5.1e-07 Score=83.34 Aligned_cols=84 Identities=12% Similarity=0.005 Sum_probs=53.1
Q ss_pred HHHHHhCCCE-EEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCC
Q 042288 122 WRVFSSCGRR-CVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM 196 (515)
Q Consensus 122 ~~~l~~~G~~-vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~ 196 (515)
++.++++ .. +|+|+++...++.+.+. +|+ +.+++++- .+ .+.-|.+.++..+...+..
T Consensus 82 l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~~~~~~~~~ 144 (201)
T 2w43_A 82 LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAES-----------VK----EYKPSPKVYKYFLDSIGAK 144 (201)
T ss_dssp HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------GT----CCTTCHHHHHHHHHHHTCS
T ss_pred HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhh-----------cC----CCCCCHHHHHHHHHhcCCC
Confidence 6666666 65 56899999999999997 886 33443320 00 1111233333332221124
Q ss_pred ceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 197 PDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 197 ~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
.++++|||.+|+.+.+.+|.+++ |+.
T Consensus 145 ~~~~vGD~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 145 EAFLVSSNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp CCEEEESCHHHHHHHHHTTCEEEEECS
T ss_pred cEEEEeCCHHHhHHHHHCCCEEEEECC
Confidence 57889999999999999999855 444
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.9e-07 Score=87.30 Aligned_cols=111 Identities=12% Similarity=0.042 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHhchh---hcCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCC------cEEEeceEE
Q 042288 95 GMKVPSIESVARAVLPKF---YSGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGA------DMVIGTEIC 161 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi------d~vigt~l~ 161 (515)
..+.+++.++.+.+...+ .....+|++. +.++++| .++|+|++....++...+. |+ |.+++++-
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~~~~~~~~~- 160 (247)
T 3dv9_A 84 DATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQANLMVTAFD- 160 (247)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTTTCCGGGEECGGG-
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHHhcCCCeEEeccc-
Confidence 347777777665543221 1123455544 5667899 5677999987777766652 43 33343321
Q ss_pred EeCceeeeEEecCCccccccHHHHHHHH---hcCCCCCceEEEeCCcCcHHHHhccccc-eeeCCC
Q 042288 162 VYKGRSTGFVKSPGVLVGKNKAGALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPPN 223 (515)
Q Consensus 162 ~~~G~~tG~i~~~~~~~g~~K~~~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 223 (515)
.+ .+.-|.+.++.. ++.. ...++++|||.+|+.|.+.+|.. +.|+..
T Consensus 161 ----------~~----~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~ 211 (247)
T 3dv9_A 161 ----------VK----YGKPNPEPYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVNTG 211 (247)
T ss_dssp ----------CS----SCTTSSHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEECCS
T ss_pred ----------CC----CCCCCCHHHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEcCC
Confidence 00 122233333333 3431 24589999999999999999965 566653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=90.38 Aligned_cols=89 Identities=8% Similarity=-0.011 Sum_probs=51.7
Q ss_pred CcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCC
Q 042288 117 LHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~ 193 (515)
.+|.+.+ .++++|..+|+|+++...++.+.+. +|++..+.....+ +..|...++......
T Consensus 97 ~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~----------------~~~K~~~~~~~~~~~ 159 (231)
T 2p11_A 97 VYPGALNALRHLGARGPTVILSDGDVVFQPRKIAR-SGLWDEVEGRVLI----------------YIHKELMLDQVMECY 159 (231)
T ss_dssp BCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHH-TTHHHHTTTCEEE----------------ESSGGGCHHHHHHHS
T ss_pred cCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHH-cCcHHhcCeeEEe----------------cCChHHHHHHHHhcC
Confidence 5565554 5667786678999999999999998 8975333221110 112322222222111
Q ss_pred CCCceEEEeCCcCcHHHH---hccccc-eeeCC
Q 042288 194 EEMPDIGLGDRKTDSLFL---NLCKES-YMVPP 222 (515)
Q Consensus 194 ~~~~~~aygDS~~DlpmL---~~a~~~-~~Vnp 222 (515)
....++++|||.+|++.+ +.+|-. +.|+.
T Consensus 160 ~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~ 192 (231)
T 2p11_A 160 PARHYVMVDDKLRILAAMKKAWGARLTTVFPRQ 192 (231)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHGGGEEEEEECC
T ss_pred CCceEEEEcCccchhhhhHHHHHcCCeEEEeCC
Confidence 134588999999955554 455554 34543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.49 E-value=2.3e-07 Score=91.66 Aligned_cols=85 Identities=20% Similarity=0.218 Sum_probs=65.1
Q ss_pred CCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|.+ ++.++++| .++|+|+++...++.+++. +|++..+.. + .++.|...++.+..
T Consensus 163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~-----------------i-~~~~K~~~~~~l~~ 223 (287)
T 3a1c_A 163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKLQA 223 (287)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHHTT
T ss_pred ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeee-----------------c-ChHHHHHHHHHHhc
Confidence 455654 45677899 5678999999999999998 999755431 1 34568888777543
Q ss_pred CCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
. ..++++|||.+|+++++.|+.++++..
T Consensus 224 ~---~~~~~vGDs~~Di~~a~~ag~~v~~~~ 251 (287)
T 3a1c_A 224 K---EVVAFVGDGINDAPALAQADLGIAVGS 251 (287)
T ss_dssp T---CCEEEEECTTTCHHHHHHSSEEEEECC
T ss_pred C---CeEEEEECCHHHHHHHHHCCeeEEeCC
Confidence 2 568899999999999999999988854
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.49 E-value=3.4e-07 Score=87.20 Aligned_cols=112 Identities=14% Similarity=0.121 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHhchh---hcCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCC------cEEEeceEE
Q 042288 95 GMKVPSIESVARAVLPKF---YSGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGA------DMVIGTEIC 161 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi------d~vigt~l~ 161 (515)
..+.+++.++.+.+...+ .....+|.+. +.++++| .++|+|.+....++...+. |+ |.+++++-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~d~i~~~~~- 161 (243)
T 3qxg_A 85 EATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFPGMFHKELMVTAFD- 161 (243)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HSTTTCCGGGEECTTT-
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCcceEEeHHh-
Confidence 347777777665543211 1223455544 5677899 5677999987766666552 43 33333221
Q ss_pred EeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccc-ceeeCCC
Q 042288 162 VYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKE-SYMVPPN 223 (515)
Q Consensus 162 ~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~-~~~Vnp~ 223 (515)
+..+.-|.+.++..+...+ ...++++|||.+|+.|.+.||. .++|+..
T Consensus 162 --------------~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~ 212 (243)
T 3qxg_A 162 --------------VKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTG 212 (243)
T ss_dssp --------------CSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCS
T ss_pred --------------CCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCC
Confidence 0022233344444433322 2447999999999999999997 5556543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.48 E-value=3.4e-07 Score=87.39 Aligned_cols=89 Identities=9% Similarity=-0.014 Sum_probs=57.7
Q ss_pred CcHHHHHHHH---hCCCEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 117 LHPETWRVFS---SCGRRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 117 ~~~~~~~~l~---~~G~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++++.+.++ ++..++|+|.+....++.+.+. +|+ |.+++++. .+ .+.-|...++..+.
T Consensus 121 ~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~g~~f~~~~~~~~-----------~~----~~kp~~~~~~~~~~ 184 (254)
T 3umc_A 121 PWPDTLAGMHALKADYWLAALSNGNTALMLDVARH-AGLPWDMLLCADL-----------FG----HYKPDPQVYLGACR 184 (254)
T ss_dssp ECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHH-HTCCCSEECCHHH-----------HT----CCTTSHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHH-cCCCcceEEeecc-----------cc----cCCCCHHHHHHHHH
Confidence 4566665444 4324567899999999999997 885 44444321 11 23345555555443
Q ss_pred CCC--CCceEEEeCCcCcHHHHhcccccee-eC
Q 042288 192 DDE--EMPDIGLGDRKTDSLFLNLCKESYM-VP 221 (515)
Q Consensus 192 ~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vn 221 (515)
..+ ...++++|||.+|+.|.+.+|..++ +|
T Consensus 185 ~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 185 LLDLPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred HcCCChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 322 2447999999999999999999865 55
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.45 E-value=6.4e-07 Score=83.65 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=56.5
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+. +.+++ | ...|+|.++...++.+.++ +|++ .+++++ + .+.-|.+.++.
T Consensus 85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~-------------~----~~Kp~p~~~~~ 145 (210)
T 2ah5_A 85 LFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSS-------------P----EAPHKADVIHQ 145 (210)
T ss_dssp ECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEEC-------------S----SCCSHHHHHHH
T ss_pred CCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHh-cCchhheeeeecCC-------------C----CCCCChHHHHH
Confidence 345444 45667 9 5678999999889999887 8864 333332 1 22336666555
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhccccce
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.+...+ ...++++|||.+|+.+.+.||-..
T Consensus 146 ~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~ 177 (210)
T 2ah5_A 146 ALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred HHHHcCCCcccEEEECCCHHHHHHHHHCCCcE
Confidence 544322 234799999999999999999865
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.2e-07 Score=88.16 Aligned_cols=54 Identities=22% Similarity=0.156 Sum_probs=42.5
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...|+.++...+. ..++++|||.||++||+.|+.++++ |..+++++.|.
T Consensus 208 ~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~ 264 (283)
T 3dao_A 208 KGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAK 264 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSS
T ss_pred CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcC
Confidence 455788888887665432 3479999999999999999999999 55667777665
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.9e-07 Score=87.24 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=55.1
Q ss_pred HHHHHHHhC-C-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEeCceeeeEEecCCccccccHHHHHH---HHhc
Q 042288 120 ETWRVFSSC-G-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLG 191 (515)
Q Consensus 120 ~~~~~l~~~-G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~ 191 (515)
+.++.++++ | ..+|+|++....++.+.+. +|++ .+++++ ..+ .+..|.+.++ +.++
T Consensus 121 ~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~~f~~i~~~~-----------~~~----~~kp~~~~~~~~~~~lg 184 (275)
T 2qlt_A 121 KLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIKRPEYFITAN-----------DVK----QGKPHPEPYLKGRNGLG 184 (275)
T ss_dssp HHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCCCCSSEECGG-----------GCS----SCTTSSHHHHHHHHHTT
T ss_pred HHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCCccCEEEEcc-----------cCC----CCCCChHHHHHHHHHcC
Confidence 344566778 8 6778999999999999987 8864 222221 001 1222333333 3344
Q ss_pred CC------CCCceEEEeCCcCcHHHHhccccceee
Q 042288 192 DD------EEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 192 ~~------~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.. ....++++|||.+|++|++.||.+++.
T Consensus 185 i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 185 FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 20 134589999999999999999988764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.5e-06 Score=79.06 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=54.8
Q ss_pred CcHHHHHH---HHhCCCE-EEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWRV---FSSCGRR-CVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~~---l~~~G~~-vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|++.+. ++++ .. +|+|.+....++.+.+. +|++ .+++++. .+ .+..|...++.
T Consensus 101 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~-----------~~----~~kp~~~~~~~ 163 (234)
T 3u26_A 101 LYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEE-----------AG----FFKPHPRIFEL 163 (234)
T ss_dssp BCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHH-----------HT----BCTTSHHHHHH
T ss_pred cCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccc-----------cC----CCCcCHHHHHH
Confidence 44555554 4445 54 56899999999999997 8863 3333321 01 12223333333
Q ss_pred ---HhcCCCCCceEEEeCCc-CcHHHHhcccccee-eCC
Q 042288 189 ---MLGDDEEMPDIGLGDRK-TDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 189 ---~~~~~~~~~~~aygDS~-~DlpmL~~a~~~~~-Vnp 222 (515)
.++.. ...++++|||. ||+.|.+.+|..++ |+.
T Consensus 164 ~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (234)
T 3u26_A 164 ALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDR 201 (234)
T ss_dssp HHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECS
T ss_pred HHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECC
Confidence 34431 24579999997 99999999997654 443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.1e-06 Score=81.91 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHhchhhcC---CCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeC
Q 042288 96 MKVPSIESVARAVLPKFYSG---DLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYK 164 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~~~~---~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~ 164 (515)
.+.+++.+..++++..+... ..+|.+ ++.++++| .++|+|.+... ++.+.+. +|++ .+++++-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~---- 156 (263)
T 3k1z_A 83 QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGG-LGLREHFDFVLTSEA---- 156 (263)
T ss_dssp CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHH-TTCGGGCSCEEEHHH----
T ss_pred CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHh-CCcHHhhhEEEeecc----
Confidence 46777777677666554321 244544 45667899 55778988775 5788887 8863 3333321
Q ss_pred ceeeeEEecCCccccccHHHHHH---HHhcCCCCCceEEEeCCc-CcHHHHhcccccee-eCCCC
Q 042288 165 GRSTGFVKSPGVLVGKNKAGALM---KMLGDDEEMPDIGLGDRK-TDSLFLNLCKESYM-VPPNP 224 (515)
Q Consensus 165 G~~tG~i~~~~~~~g~~K~~~l~---~~~~~~~~~~~~aygDS~-~DlpmL~~a~~~~~-Vnp~~ 224 (515)
.+ .+.-|...++ +.++.. ...++++|||. +|+.+.+.+|..++ ++...
T Consensus 157 -------~~----~~Kp~~~~~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~ 209 (263)
T 3k1z_A 157 -------AG----WPKPDPRIFQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ 209 (263)
T ss_dssp -------HS----SCTTSHHHHHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred -------cC----CCCCCHHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence 01 1111223333 333431 34579999996 99999999997766 55544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.6e-07 Score=89.21 Aligned_cols=54 Identities=19% Similarity=0.189 Sum_probs=41.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~ 250 (279)
T 4dw8_A 194 QGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAAD 250 (279)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCC
Confidence 456788877777654322 3479999999999999999999998 45666776664
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-07 Score=91.39 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=39.5
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++++|||.||++|++.|+.++++ |.++.++..|.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~ 250 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQ 250 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcc
Confidence 455788888887765433 3479999999999999999999998 56777777665
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=6.5e-07 Score=83.00 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=63.0
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.++++| .++|+|+++...++.+++. +|++.++... ..|.+.++..+...+ ...
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~--------------------kpk~~~~~~~~~~~~~~~~~ 112 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ--------------------VDKRSAYQHLKKTLGLNDDE 112 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC--------------------SSCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC--------------------CChHHHHHHHHHHhCCCHHH
Confidence 467788899 5678999999999999998 9998644321 113344443332211 245
Q ss_pred eEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
++++|||.+|++|++.++.++++.. .+.++..|.
T Consensus 113 ~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad 147 (191)
T 3n1u_A 113 FAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFAD 147 (191)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSS
T ss_pred EEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCC
Confidence 7899999999999999999998854 344444443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=81.69 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=57.5
Q ss_pred CcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 117 LHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.+|++.+ .++++...+|+|.+....++.+.+. +|+. .+++++ ..+ .+.-|...++..+.
T Consensus 117 ~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~~~f~~~~~~~-----------~~~----~~kp~~~~~~~~~~ 180 (254)
T 3umg_A 117 PWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKN-AGIPWDVIIGSD-----------INR----KYKPDPQAYLRTAQ 180 (254)
T ss_dssp BCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHH-HTCCCSCCCCHH-----------HHT----CCTTSHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHh-CCCCeeEEEEcC-----------cCC----CCCCCHHHHHHHHH
Confidence 4455544 5555434567899999999999997 8863 222221 111 22234455555544
Q ss_pred CCC--CCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 192 DDE--EMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 192 ~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
..+ ...++++|||.+|+.|.+.+|..++ +|.
T Consensus 181 ~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 181 VLGLHPGEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp HTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred HcCCChHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 322 2347999999999999999999876 553
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.1e-06 Score=82.15 Aligned_cols=88 Identities=7% Similarity=-0.053 Sum_probs=53.6
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+. +.++ +| ..+|+|++....++...+. +|++..+. ..++ .+. . .++ -.+.+.+.++.
T Consensus 113 ~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~-------~i~~---~~k-p-~~~-~~~~~~~~l~~ 177 (251)
T 2pke_A 113 VIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQ-SGLSDLFP-------RIEV---VSE-K-DPQ-TYARVLSEFDL 177 (251)
T ss_dssp BCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHH-HSGGGTCC-------CEEE---ESC-C-SHH-HHHHHHHHHTC
T ss_pred cCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH-cCcHHhCc-------eeee---eCC-C-CHH-HHHHHHHHhCc
Confidence 445544 4566 88 4567999998888988887 88642111 1111 011 1 111 12233333443
Q ss_pred CCCCceEEEeCCc-CcHHHHhccccceee
Q 042288 193 DEEMPDIGLGDRK-TDSLFLNLCKESYMV 220 (515)
Q Consensus 193 ~~~~~~~aygDS~-~DlpmL~~a~~~~~V 220 (515)
. ...++++|||. +|+.|.+.+|..++.
T Consensus 178 ~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 178 P-AERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp C-GGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred C-chhEEEECCCchhhHHHHHHCCCEEEE
Confidence 1 34579999999 999999999998663
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.28 E-value=5.7e-06 Score=77.03 Aligned_cols=81 Identities=15% Similarity=0.096 Sum_probs=54.1
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH--H---HHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA--G---ALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~--~---~l~~~ 189 (515)
++++.++++| ...|+|.++...++...+. +|+ |.+++++- .+..|. + .+.+.
T Consensus 91 ~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~-----------------~~~~KP~p~~~~~a~~~ 152 (216)
T 3kbb_A 91 EALEFVKSKRIKLALATSTPQREALERLRR-LDLEKYFDVMVFGDQ-----------------VKNGKPDPEIYLLVLER 152 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGG-----------------SSSCTTSTHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccccCCcHHHHHHHHHh-cCCCccccccccccc-----------------cCCCcccHHHHHHHHHh
Confidence 4555777899 5678999999999999997 886 44444331 111222 2 22333
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
++-. ...++.+|||.+|+..-+.+|-..+
T Consensus 153 lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 153 LNVV-PEKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp HTCC-GGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred hCCC-ccceEEEecCHHHHHHHHHcCCcEE
Confidence 4431 3457889999999999999997643
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=4.5e-07 Score=89.05 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=42.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...|+.++...+. ..++++|||.||++|++.|+.++++ |.++.+++.|.
T Consensus 199 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad 255 (290)
T 3dnp_A 199 KGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKAD 255 (290)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcC
Confidence 466798888887765433 3479999999999999999999998 45667777665
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.3e-06 Score=82.90 Aligned_cols=93 Identities=9% Similarity=0.046 Sum_probs=56.5
Q ss_pred CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCc
Q 042288 130 RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTD 207 (515)
Q Consensus 130 ~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~D 207 (515)
..++++ .....++.+.+. ++-. +-. .....|...-.+.. .+..|...|+..+...+ ...++++|||.||
T Consensus 158 ~ki~~~-~~~~~~~~~~~~-l~~~-~~~--~~~~~~~~~~ei~~----~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~ND 228 (274)
T 3fzq_A 158 HKICLW-SNEKVFDEVKDI-LQDK-MEL--AQRDISSQYYEIIQ----KDFHKGKAIKRLQERLGVTQKETICFGDGQND 228 (274)
T ss_dssp CEEEEE-CCHHHHHHHHHH-HGGG-EEE--EEEEGGGTEEEEEE----TTCSHHHHHHHHHHHHTCCSTTEEEECCSGGG
T ss_pred EEEEEE-cCHHHHHHHHHH-hhcc-eEE--EeccCCCceEEEee----CCCCHHHHHHHHHHHcCCCHHHEEEECCChhH
Confidence 355555 556667777776 6532 100 00011101112222 45578877777654422 2458999999999
Q ss_pred HHHHhccccceee-CCCCCCCcccc
Q 042288 208 SLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 208 lpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
++|++.|+.++++ |.++++++.|.
T Consensus 229 i~m~~~ag~~vam~na~~~~k~~A~ 253 (274)
T 3fzq_A 229 IVMFQASDVTIAMKNSHQQLKDIAT 253 (274)
T ss_dssp HHHHHTCSEEEEETTSCHHHHHHCS
T ss_pred HHHHHhcCceEEecCccHHHHHhhh
Confidence 9999999999998 45666666554
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.8e-06 Score=78.74 Aligned_cols=93 Identities=16% Similarity=0.068 Sum_probs=56.6
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcC--CcEEEeceEEEeCceeeeEEecCCccccccHHHHHH--H
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLG--ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM--K 188 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lG--id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~--~ 188 (515)
.+|.+. +.+++ | ..+|+|.+....++...+. ++ +|.+++++- + + .... ..+-....++ +
T Consensus 100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~-l~~~fd~i~~~~~-~------~---~~KP-~~~~~~~~l~~~~ 166 (240)
T 3smv_A 100 AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK-LGVEFDHIITAQD-V------G---SYKP-NPNNFTYMIDALA 166 (240)
T ss_dssp BCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT-TCSCCSEEEEHHH-H------T---SCTT-SHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh-cCCccCEEEEccc-c------C---CCCC-CHHHHHHHHHHHH
Confidence 455554 45666 7 5577999999888988887 76 566666541 0 0 0000 1111112332 2
Q ss_pred HhcCCCCCceEEEeCCc-CcHHHHhcccccee-eCCC
Q 042288 189 MLGDDEEMPDIGLGDRK-TDSLFLNLCKESYM-VPPN 223 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~-~DlpmL~~a~~~~~-Vnp~ 223 (515)
.++.. ...++++|||. +|+.|.+.+|..++ +|..
T Consensus 167 ~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~ 202 (240)
T 3smv_A 167 KAGIE-KKDILHTAESLYHDHIPANDAGLVSAWIYRR 202 (240)
T ss_dssp HTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred hcCCC-chhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence 23331 34579999996 99999999999876 4543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=98.18 E-value=3.3e-05 Score=74.74 Aligned_cols=107 Identities=12% Similarity=-0.023 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhchhh-cCCCcHHHHHHHHh--CC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeee
Q 042288 98 VPSIESVARAVLPKFY-SGDLHPETWRVFSS--CG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTG 169 (515)
Q Consensus 98 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~--~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG 169 (515)
.+..+++.+.|..... .-.++|.+.+.+++ +| ..+|+|+++...++.+.+. +|++ .+++++-
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~--------- 171 (260)
T 2gfh_A 102 RKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGE--------- 171 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGG---------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCC---------
Confidence 3444444444433211 12467877775542 46 4567999999999999997 8864 3333321
Q ss_pred EEecCCccccccH--HHHHHHH---hcCCCCCceEEEeCC-cCcHHHHhcccc--ceeeCCC
Q 042288 170 FVKSPGVLVGKNK--AGALMKM---LGDDEEMPDIGLGDR-KTDSLFLNLCKE--SYMVPPN 223 (515)
Q Consensus 170 ~i~~~~~~~g~~K--~~~l~~~---~~~~~~~~~~aygDS-~~DlpmL~~a~~--~~~Vnp~ 223 (515)
.+..| .+.++.. ++.. ...++++||| .+|+.+-+.+|- .++|+..
T Consensus 172 --------~~~~KP~p~~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~ 224 (260)
T 2gfh_A 172 --------QKEEKPAPSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKS 224 (260)
T ss_dssp --------SSSCTTCHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred --------CCCCCCCHHHHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEcCC
Confidence 11122 2333332 3321 3457899996 999999999997 5777643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-06 Score=86.46 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=42.9
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...|+.++...+. ..++++|||.||++||+.|+.++++ |..+++++.|.
T Consensus 206 ~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~ 262 (285)
T 3pgv_A 206 GGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP 262 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCT
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCC
Confidence 456788888887665333 3479999999999999999999998 56777887774
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.8e-06 Score=79.70 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=50.8
Q ss_pred CcHHHHH---HHHhCCC-EEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCGR-RCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~-~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|++.+ .++++|+ ++|+|++.. .++.+.+. +|+ |.+++++-. |.- .|. .+-.+.+.+
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~-------~~~-Kp~----~~~~~~~~~ 161 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEI-------KAV-KPN----PKIFGFALA 161 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------------------CCHHHHHHH
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEecccc-------CCC-CCC----HHHHHHHHH
Confidence 4555554 5667894 567899877 47888887 885 455544311 000 010 111223333
Q ss_pred HhcCCCCCceEEEeCCcC-cHHHHhcccccee-eCC
Q 042288 189 MLGDDEEMPDIGLGDRKT-DSLFLNLCKESYM-VPP 222 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~-DlpmL~~a~~~~~-Vnp 222 (515)
.++. .+ +++|||.+ |+.+-+.+|-..+ |+.
T Consensus 162 ~~~~---~~-~~vgD~~~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 162 KVGY---PA-VHVGDIYELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp HHCS---SE-EEEESSCCCCCCCSSSCSEEEEEBCT
T ss_pred HcCC---Ce-EEEcCCchHhHHHHHHCCCeEEEECC
Confidence 3443 33 88999998 9999999988755 443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.5e-05 Score=72.97 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=61.3
Q ss_pred HcCCCHHHHHHHHHHHhchhh----cCCCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCC----cEEEeceEE
Q 042288 93 FAGMKVPSIESVARAVLPKFY----SGDLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGA----DMVIGTEIC 161 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~ 161 (515)
-.|++.++.+++.+++...+. .-..+|.+.+ .++++...+|+|.+... .+. +|+ |.+++++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~-~~l~~~f~~~~~~~~- 150 (230)
T 3vay_A 78 DAGYDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRR-LGLADYFAFALCAED- 150 (230)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGG-STTGGGCSEEEEHHH-
T ss_pred HhCCChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhh-cCcHHHeeeeEEccc-
Confidence 357887777766665544321 1235555555 45555345668887654 354 675 44444321
Q ss_pred EeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCc-CcHHHHhcccccee-eCC
Q 042288 162 VYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRK-TDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 162 ~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~-~DlpmL~~a~~~~~-Vnp 222 (515)
.+ .+.-|.+.++..+...+ ...++++|||. +|+.|.+.+|..++ |+.
T Consensus 151 ----------~~----~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 151 ----------LG----IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp ----------HT----CCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred ----------cC----CCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcC
Confidence 00 12223344443332211 24578999997 99999999998765 454
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.09 E-value=2.7e-06 Score=78.17 Aligned_cols=83 Identities=8% Similarity=-0.009 Sum_probs=55.6
Q ss_pred HHHHHHHhCC-CEEEEecCc-HHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--C
Q 042288 120 ETWRVFSSCG-RRCVLTANP-RIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--E 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~-~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~ 195 (515)
++++.++++| .++|+|+++ ...++.+.+. +|++..+.... + .+..|.+.++..+...+ .
T Consensus 75 e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~---------------~-~~~~k~~~~~~~~~~~~~~~ 137 (187)
T 2wm8_A 75 EVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHRE---------------I-YPGSKITHFERLQQKTGIPF 137 (187)
T ss_dssp HHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEE---------------E-SSSCHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeE---------------E-EeCchHHHHHHHHHHcCCCh
Confidence 4455677889 678899998 6899999998 99863222110 0 12235555554433211 2
Q ss_pred CceEEEeCCcCcHHHHhcccccee
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
..++++|||.+|+.+.+.+|-..+
T Consensus 138 ~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 138 SQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHEEEEeCCccChHHHHHcCCEEE
Confidence 347889999999999999987654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.07 E-value=7.5e-06 Score=81.17 Aligned_cols=54 Identities=26% Similarity=0.258 Sum_probs=42.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...|+.++...+. ..++++|||.||++|++.|+.++++ |.++.+++.|.
T Consensus 225 ~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad 281 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAAN 281 (304)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhcc
Confidence 456788888887765433 3479999999999999999999998 55667777665
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.06 E-value=5e-06 Score=79.06 Aligned_cols=84 Identities=14% Similarity=0.027 Sum_probs=51.4
Q ss_pred EEEe-cCcHHHHHHHHHhhcC--CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcC
Q 042288 132 CVLT-ANPRIMVEAFLKDFLG--ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKT 206 (515)
Q Consensus 132 vivS-aS~~~~v~~ia~~~lG--id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~ 206 (515)
.+++ ......++.+.+. ++ ++.+ + |.....+.. .+..|...++..+...+ ...++++|||.|
T Consensus 114 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-------~~~~~ei~~----~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~n 180 (231)
T 1wr8_A 114 VIMRETINVETVREIINE-LNLNLVAV-D-------SGFAIHVKK----PWINKGSGIEKASEFLGIKPKEVAHVGDGEN 180 (231)
T ss_dssp EECTTTSCHHHHHHHHHH-TTCSCEEE-E-------CSSCEEEEC----TTCCHHHHHHHHHHHHTSCGGGEEEEECSGG
T ss_pred EEECCCCCHHHHHHHHHh-cCCcEEEE-e-------cCcEEEEec----CCCChHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 3444 3366677888887 66 3322 1 111122322 34567777766654322 234789999999
Q ss_pred cHHHHhccccceeeC-CCCCCCc
Q 042288 207 DSLFLNLCKESYMVP-PNPKVDP 228 (515)
Q Consensus 207 DlpmL~~a~~~~~Vn-p~~~l~~ 228 (515)
|++|++.++.++++. ..+.++.
T Consensus 181 D~~~~~~ag~~v~~~~~~~~~~~ 203 (231)
T 1wr8_A 181 DLDAFKVVGYKVAVAQAPKILKE 203 (231)
T ss_dssp GHHHHHHSSEEEECTTSCHHHHT
T ss_pred HHHHHHHcCCeEEecCCCHHHHh
Confidence 999999999999884 4444443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.5e-06 Score=76.49 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=65.1
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHH--hhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLK--DFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE-- 195 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~--~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~-- 195 (515)
+++.++++| .+.|+|+. ..++.+++ . +|++ ++. + +..|...++.++...+.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~-lgi~-~~~---------------g-----~~~K~~~l~~~~~~~gi~~ 99 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALK-LDCK-TEV---------------S-----VSDKLATVDEWRKEMGLCW 99 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTC-CCCC-EEC---------------S-----CSCHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhC-CCcE-EEE---------------C-----CCChHHHHHHHHHHcCcCh
Confidence 577888999 56789998 67888998 5 6776 321 1 23488888877665332
Q ss_pred CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
..++++|||.||++|++.|+.++++ |..+.++..|.
T Consensus 100 ~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad 136 (168)
T 3ewi_A 100 KEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVG 136 (168)
T ss_dssp GGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCS
T ss_pred HHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCC
Confidence 3478899999999999999999998 55666776665
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.76 E-value=9.5e-05 Score=81.21 Aligned_cols=88 Identities=20% Similarity=0.221 Sum_probs=69.7
Q ss_pred cCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++++ +++.++++| +++++||-....++.++++ +|++.+++. + ..++|.+.++++
T Consensus 455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~~~~~-----------------~-~P~~K~~~v~~l 515 (645)
T 3j08_A 455 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKL 515 (645)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEe-----------------C-CHHhHHHHHHHH
Confidence 3445554 555778899 6677999999999999998 999865441 2 456899999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
... ....+.||+.||.|||+.|+.++++...
T Consensus 516 ~~~---~~v~~vGDg~ND~~al~~A~vgiamg~g 546 (645)
T 3j08_A 516 QAK---EVVAFVGDGINDAPALAQADLGIAVGSG 546 (645)
T ss_dssp TTT---CCEEEEECSSSCHHHHHHSSEEEEECCC
T ss_pred hhC---CeEEEEeCCHhHHHHHHhCCEEEEeCCC
Confidence 553 5678899999999999999999999643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.76 E-value=1.7e-05 Score=75.37 Aligned_cols=110 Identities=22% Similarity=0.110 Sum_probs=70.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceE--EEe-Cceee-e------------------------
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEI--CVY-KGRST-G------------------------ 169 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l--~~~-~G~~t-G------------------------ 169 (515)
++++.++++| .++++||-+...++++++. +|++. ++|..- ..+ +|... -
T Consensus 29 ~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~ 107 (227)
T 1l6r_A 29 ESIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILT 107 (227)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGG
T ss_pred HHHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCcccc
Confidence 3455667789 5567999999999999998 99873 554431 111 22211 0
Q ss_pred -----------------------------E-EecCCc----cccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhc
Q 042288 170 -----------------------------F-VKSPGV----LVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNL 213 (515)
Q Consensus 170 -----------------------------~-i~~~~~----~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~ 213 (515)
. ..++.+ ..|..|...++.++...+. ..++++|||.||++|++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ 187 (227)
T 1l6r_A 108 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL 187 (227)
T ss_dssp GGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS
T ss_pred ccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH
Confidence 0 000000 1456888888777654322 347999999999999999
Q ss_pred cccceeeC-CCCCCCccc
Q 042288 214 CKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 214 a~~~~~Vn-p~~~l~~~A 230 (515)
|+.++++. ..+.++..|
T Consensus 188 ag~~va~~n~~~~~k~~a 205 (227)
T 1l6r_A 188 PVRKACPANATDNIKAVS 205 (227)
T ss_dssp SSEEEECTTSCHHHHHHC
T ss_pred cCceEEecCchHHHHHhC
Confidence 99999984 444455444
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.74 E-value=2.9e-05 Score=70.28 Aligned_cols=92 Identities=13% Similarity=0.089 Sum_probs=56.1
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcC--CcEEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLG--ADMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lG--id~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| .++|+|+++. ..++.+.+. +| ++.++.......+ .+..+.
T Consensus 33 ~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~----------~~~~~K 101 (179)
T 3l8h_A 33 LQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MGGVVDAIFMCPHGPDD----------GCACRK 101 (179)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TTCCCCEEEEECCCTTS----------CCSSST
T ss_pred HHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEEcCCCCCC----------CCCCCC
Confidence 35666778899 5677999875 567778887 89 8876632111000 010111
Q ss_pred cHHH---HHHHHhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 181 NKAG---ALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 181 ~K~~---~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
-+.+ .+.+.++.. ...++++|||.+|+.+.+.+|-. +.|+.
T Consensus 102 P~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 146 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQT 146 (179)
T ss_dssp TSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEEST
T ss_pred CCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECC
Confidence 1222 333334431 34588999999999999999965 44554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.68 E-value=2.2e-06 Score=81.01 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=28.9
Q ss_pred cccHHHHHHHHhcCCC--CCceEEEeCC-cCcHHHHhcccccee
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGLGDR-KTDSLFLNLCKESYM 219 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~aygDS-~~DlpmL~~a~~~~~ 219 (515)
+..|...++..+...+ ...++++||| .||++|++.||.+++
T Consensus 175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~ 218 (250)
T 2c4n_A 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI 218 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEE
Confidence 3445555555543322 2458999999 799999999999865
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=4.9e-05 Score=84.50 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=70.1
Q ss_pred cCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.+++ ++++.++++| +++++||-....+++++++ +|++++.+ .+ ..++|.+.++++
T Consensus 552 ~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~v~a-----------------~~-~P~~K~~~v~~l 612 (736)
T 3rfu_A 552 EDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKKVVA-----------------EI-MPEDKSRIVSEL 612 (736)
T ss_dssp ECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCCEEC-----------------SC-CHHHHHHHHHHH
T ss_pred eccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCEEEE-----------------ec-CHHHHHHHHHHH
Confidence 344554 4556778899 6677999999999999999 99986443 13 567899988887
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
... .....+.||+.||.|||+.|+.++++...
T Consensus 613 ~~~--g~~V~~vGDG~ND~paL~~AdvGIAmg~g 644 (736)
T 3rfu_A 613 KDK--GLIVAMAGDGVNDAPALAKADIGIAMGTG 644 (736)
T ss_dssp HHH--SCCEEEEECSSTTHHHHHHSSEEEEESSS
T ss_pred Hhc--CCEEEEEECChHhHHHHHhCCEEEEeCCc
Confidence 654 45678899999999999999999999643
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0002 Score=69.25 Aligned_cols=91 Identities=7% Similarity=0.006 Sum_probs=59.4
Q ss_pred CCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhc--C-------------CcEEEeceEEEeCceeeeEEecCCcccc
Q 042288 116 DLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFL--G-------------ADMVIGTEICVYKGRSTGFVKSPGVLVG 179 (515)
Q Consensus 116 ~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~l--G-------------id~vigt~l~~~~G~~tG~i~~~~~~~g 179 (515)
..+|++.+.+++ | ...|+|.++...++.+.+. + | ++.++.+.+ +|. .|+.
T Consensus 125 ~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~-------~g~--KP~p--- 190 (253)
T 2g80_A 125 PVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINT-------SGK--KTET--- 190 (253)
T ss_dssp CCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHH-------HCC--TTCH---
T ss_pred CCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeec-------cCC--CCCH---
Confidence 478999999998 9 6788999999999988886 6 6 555554311 120 1111
Q ss_pred ccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 180 KNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
+=...+.+.++.. ...++.+|||.+|+.-=+.+|-..+ |+.
T Consensus 191 -~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 191 -QSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp -HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred -HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 1112222334431 3457899999999999998887654 543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00015 Score=80.72 Aligned_cols=87 Identities=21% Similarity=0.222 Sum_probs=69.5
Q ss_pred cCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++++ +++.++++| +++++||-....+++++++ +|++.+++. + ..++|.+.++++
T Consensus 533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~~~~~-----------------~-~P~~K~~~v~~l 593 (723)
T 3j09_A 533 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKL 593 (723)
T ss_dssp ECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHH
T ss_pred cCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCcEEEcc-----------------C-CHHHHHHHHHHH
Confidence 3455555 455777899 5677999999999999999 999865541 2 456799999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
... ....+.||+.||.|||+.|+.++++..
T Consensus 594 ~~~---~~v~~vGDg~ND~~al~~A~vgiamg~ 623 (723)
T 3j09_A 594 QAK---EVVAFVGDGINDAPALAQADLGIAVGS 623 (723)
T ss_dssp TTT---CCEEEEECSSTTHHHHHHSSEEEECCC
T ss_pred hcC---CeEEEEECChhhHHHHhhCCEEEEeCC
Confidence 553 567889999999999999999999964
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=76.08 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=51.8
Q ss_pred CcHHHHH---HHHhCC-CEEEEecC------cHHHHHHHHHhhcC--CcEEEeceEEEeCceeeeEEecCCccccccHH-
Q 042288 117 LHPETWR---VFSSCG-RRCVLTAN------PRIMVEAFLKDFLG--ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKA- 183 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS------~~~~v~~ia~~~lG--id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~- 183 (515)
.+|++.+ .++++| ..+|+|.+ ....++..... +. +|.+++++- .+..|.
T Consensus 101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~-l~~~fd~i~~~~~-----------------~~~~KP~ 162 (555)
T 3i28_A 101 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCE-LKMHFDFLIESCQ-----------------VGMVKPE 162 (555)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHH-HHTTSSEEEEHHH-----------------HTCCTTC
T ss_pred cChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhh-hhhheeEEEeccc-----------------cCCCCCC
Confidence 5566665 566899 56789997 44444443322 22 577766541 111222
Q ss_pred -HHHHH---HhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 184 -GALMK---MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 184 -~~l~~---~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+.++. .++.. ...++++|||.+|+...+.+|...+.-
T Consensus 163 p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 163 PQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 22222 33431 345788999999999999999877653
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00061 Score=65.88 Aligned_cols=86 Identities=10% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC---C----cEEEeceEEEeCceeeeEEecCCccccccHH-
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG---A----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA- 183 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG---i----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~- 183 (515)
..+|.+.+ .++++| ..+|+|.+....++.+.+. ++ + |.+++++ .+ .|.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~------------------~~-~KP~ 189 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTK------------------IG-HKVE 189 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGG------------------GC-CTTC
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecC------------------CC-CCCC
Confidence 35665554 566789 5577999998888888774 43 3 4444431 12 332
Q ss_pred -H---HHHHHhcCCCCCceEEEeCCcCcHHHHhccccce-eeCC
Q 042288 184 -G---ALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 184 -~---~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp 222 (515)
+ .+.+.++.. ...++.+|||.+|+..-+.+|-.. .|+.
T Consensus 190 p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~ 232 (261)
T 1yns_A 190 SESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVR 232 (261)
T ss_dssp HHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 2 222333431 345789999999999999998754 4643
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00035 Score=66.80 Aligned_cols=95 Identities=18% Similarity=0.110 Sum_probs=51.4
Q ss_pred CcHHHH---HHHHhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETW---RVFSSCGRRC-VLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~---~~l~~~G~~v-ivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|.+. +.++++|..+ ++|++.. +..+.+. +|+ |.+++++-. |.- .|+ .+=...+.+
T Consensus 117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~-------~~~-KP~----p~~~~~a~~ 181 (250)
T 4gib_A 117 ILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNH-LGISDKFDFIADAGKC-------KNN-KPH----PEIFLMSAK 181 (250)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-HTCGGGCSEECCGGGC-------CSC-TTS----SHHHHHHHH
T ss_pred cchhHHHHHHHHHhcccccccccccch--hhhHhhh-cccccccceeeccccc-------CCC-CCc----HHHHHHHHH
Confidence 455544 4667888554 4555543 3456676 786 444443310 000 011 011122223
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhcccc-ceeeCCCCCCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKE-SYMVPPNPKVD 227 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~l~ 227 (515)
.++.. ...++++|||.+|+..-+.||- .+.|+....++
T Consensus 182 ~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~ 220 (250)
T 4gib_A 182 GLNVN-PQNCIGIEDASAGIDAINSANMFSVGVGNYENLK 220 (250)
T ss_dssp HHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTT
T ss_pred HhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEECChhHhc
Confidence 34431 3457889999999999999996 45565444443
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00015 Score=69.23 Aligned_cols=82 Identities=12% Similarity=0.038 Sum_probs=48.6
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH--H---HHHHH
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA--G---ALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~--~---~l~~~ 189 (515)
+.++.++++|. +.++|++.. .+.+.+. +|+ |.+++++- .+..|. + ...+.
T Consensus 102 ~ll~~L~~~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~-----------------~~~~KP~p~~~~~a~~~ 161 (243)
T 4g9b_A 102 SLLADLRAQQISVGLASVSLN--APTILAA-LELREFFTFCADASQ-----------------LKNSKPDPEIFLAACAG 161 (243)
T ss_dssp HHHHHHHHTTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGG-----------------CSSCTTSTHHHHHHHHH
T ss_pred HHHHhhhcccccceecccccc--hhhhhhh-hhhcccccccccccc-----------------ccCCCCcHHHHHHHHHH
Confidence 34456778994 566777754 4566676 885 44443331 122232 1 22223
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccce-eeCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp 222 (515)
++.. ...++.+|||.+|+..-+.||-.. .|+.
T Consensus 162 lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 162 LGVP-PQACIGIEDAQAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HTSC-GGGEEEEESSHHHHHHHHHHTCEEEEEST
T ss_pred cCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 4431 345788999999999999998654 4543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00066 Score=78.53 Aligned_cols=111 Identities=13% Similarity=-0.003 Sum_probs=69.5
Q ss_pred CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEec-------eE----EE------eCceeeeE---
Q 042288 115 GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGT-------EI----CV------YKGRSTGF--- 170 (515)
Q Consensus 115 ~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt-------~l----~~------~~G~~tG~--- 170 (515)
+..+++ +++.++++| +++++||=...-+.+++++ +|++.--+. +. .. ....++|.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 345554 445677899 5677999999999999999 998410000 00 00 00011111
Q ss_pred -----------------EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC--CCCCCCccc
Q 042288 171 -----------------VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP--PNPKVDPVS 230 (515)
Q Consensus 171 -----------------i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn--p~~~l~~~A 230 (515)
+-. .+ ..++|.+.++.+-.. .....+.||+.||.|||+.|+.++++. .....+..|
T Consensus 682 ~~~~~~l~~~~~~~~~~v~a-r~-~P~~K~~iv~~lq~~--g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aA 756 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFA-RT-SPQQKLVIVESCQRL--GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEE-ec-CHHHHHHHHHHHHHc--CCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhc
Confidence 111 12 456787777665443 355788999999999999999999985 455455444
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.13 E-value=0.001 Score=76.77 Aligned_cols=95 Identities=16% Similarity=0.083 Sum_probs=68.3
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeE------------------EecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGF------------------VKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~------------------i~~~~~~~g 179 (515)
+++++.++++| +++++||-....++.++++ +|++.- ..+ +.+..++|. +-. .+ ..
T Consensus 609 ~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~-~~~--i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~-r~-~P 682 (995)
T 3ar4_A 609 MGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGE-NEE--VADRAYTGREFDDLPLAEQREACRRACCFA-RV-EP 682 (995)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCT-TCC--CTTTEEEHHHHHTSCHHHHHHHHHHCCEEE-SC-CS
T ss_pred HHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCC-CCc--ccceEEEchhhhhCCHHHHHHHHhhCcEEE-Ee-CH
Confidence 34556788899 6677999999999999999 998520 000 012233331 111 12 46
Q ss_pred ccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 180 KNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
++|.+.++.+... ...+.+.||+.||.|||+.|+.++++.
T Consensus 683 ~~K~~~v~~l~~~--g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 683 SHKSKIVEYLQSY--DEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp SHHHHHHHHHHTT--TCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred HHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 7899999988665 456788999999999999999999997
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00067 Score=77.07 Aligned_cols=103 Identities=16% Similarity=0.077 Sum_probs=70.0
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEE--eceEEEe-Cceeee----------EEecCCcc
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVI--GTEICVY-KGRSTG----------FVKSPGVL 177 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vi--gt~l~~~-~G~~tG----------~i~~~~~~ 177 (515)
+.++|++. +.++++| +++++||-....++.+|++ +|++.-+ +.++.+. ++.+++ .+-. .+
T Consensus 534 Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~a-rv- 610 (920)
T 1mhs_A 534 DPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFA-EV- 610 (920)
T ss_dssp CCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEE-SC-
T ss_pred ccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEE-Ee-
Confidence 44566655 4677899 6677999999999999999 9995211 0110000 000000 0111 12
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
..++|.+.++.+... .....+.||+.||.|||+.|+.++++..
T Consensus 611 ~P~~K~~iV~~Lq~~--g~~Vam~GDGvNDapaLk~AdvGIAmg~ 653 (920)
T 1mhs_A 611 FPQHKYNVVEILQQR--GYLVAMTGDGVNDAPSLKKADTGIAVEG 653 (920)
T ss_dssp CSTHHHHHHHHHHTT--TCCCEECCCCGGGHHHHHHSSEEEEETT
T ss_pred CHHHHHHHHHHHHhC--CCeEEEEcCCcccHHHHHhCCcCccccc
Confidence 567899999988664 3567788999999999999999999984
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0018 Score=62.61 Aligned_cols=76 Identities=16% Similarity=0.002 Sum_probs=47.1
Q ss_pred HHHHHHHhCC-CEEEEecCcH----HHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPR----IMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~----~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| .+++||+-++ ..+...++. +|++.+-...+....+ ...|..+.+++... +
T Consensus 108 ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~-------------~~~K~~~r~~L~~~-g 172 (260)
T 3pct_A 108 EFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKD-------------KSNKSVRFKQVEDM-G 172 (260)
T ss_dssp HHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESS-------------CSSSHHHHHHHHTT-T
T ss_pred HHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCC-------------CCChHHHHHHHHhc-C
Confidence 3455677899 5677998865 477788887 8986321112221111 23466666666543 2
Q ss_pred CCceEEEeCCcCcHHH
Q 042288 195 EMPDIGLGDRKTDSLF 210 (515)
Q Consensus 195 ~~~~~aygDS~~Dlpm 210 (515)
..+...+||+.+|++.
T Consensus 173 y~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 173 YDIVLFVGDNLNDFGD 188 (260)
T ss_dssp CEEEEEEESSGGGGCG
T ss_pred CCEEEEECCChHHcCc
Confidence 3445668999999997
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0021 Score=62.12 Aligned_cols=76 Identities=17% Similarity=0.029 Sum_probs=46.3
Q ss_pred HHHHHHHhCC-CEEEEecCcH----HHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPR----IMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~----~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| .++|||+-++ ..+....+. +|++.+-...+....+ ...|..+++++... +
T Consensus 108 ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~-------------~~~K~~~r~~l~~~-G 172 (262)
T 3ocu_A 108 EFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKD-------------KSAKAARFAEIEKQ-G 172 (262)
T ss_dssp HHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESS-------------CSCCHHHHHHHHHT-T
T ss_pred HHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCC-------------CCChHHHHHHHHhc-C
Confidence 4455677899 6677998765 477778887 8986211112221111 23466666665443 2
Q ss_pred CCceEEEeCCcCcHHH
Q 042288 195 EMPDIGLGDRKTDSLF 210 (515)
Q Consensus 195 ~~~~~aygDS~~Dlpm 210 (515)
..+...+||+.+|++.
T Consensus 173 y~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 173 YEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEEEEEESSGGGGCS
T ss_pred CCEEEEECCChHHhcc
Confidence 2345667999999997
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0017 Score=75.05 Aligned_cols=97 Identities=16% Similarity=0.037 Sum_probs=65.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceE---------EE--------eCceeeeE-----------
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEI---------CV--------YKGRSTGF----------- 170 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l---------~~--------~~G~~tG~----------- 170 (515)
++++.++++| +++++||-....+..++++ +|++.--+..+ .+ ....++|.
T Consensus 606 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~ 684 (1028)
T 2zxe_A 606 DAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684 (1028)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHH
Confidence 4556778899 6677999999999999999 99851000000 00 00011221
Q ss_pred ---------EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 171 ---------VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 171 ---------i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+-. .+ ..++|.+.++.+... .....+.||+.||.|||+.|+.++++.
T Consensus 685 ~~~~~~~~~v~a-r~-~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~paLk~AdvGIAmg 740 (1028)
T 2zxe_A 685 DILHYHTEIVFA-RT-SPQQKLIIVEGCQRQ--GAIVAVTGDGVNDSPALKKADIGVAMG 740 (1028)
T ss_dssp HHHHHCSEEEEE-SC-CHHHHHHHHHHHHHT--TCCEEEEECSGGGHHHHHHSSEEEEES
T ss_pred HHHhhCCcEEEE-Ec-CHHHHHHHHHHHHhC--CCEEEEEcCCcchHHHHHhCCceEEeC
Confidence 111 12 567898888877654 456788999999999999999999986
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=59.38 Aligned_cols=88 Identities=8% Similarity=-0.073 Sum_probs=52.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHH---HHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~~~~ 194 (515)
.++++.++++| ...|+|+++...+..+.+ ..+|.+++.+-. + + +.-+.+.+. +.++...
T Consensus 42 ~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~--~~~d~v~~~~~~-----------~--~--~KP~p~~~~~a~~~l~~~~ 104 (196)
T 2oda_A 42 QNALKALRDQGMPCAWIDELPEALSTPLAA--PVNDWMIAAPRP-----------T--A--GWPQPDACWMALMALNVSQ 104 (196)
T ss_dssp HHHHHHHHHHTCCEEEECCSCHHHHHHHHT--TTTTTCEECCCC-----------S--S--CTTSTHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHCCCEEEEEcCChHHHHHHhcC--ccCCEEEECCcC-----------C--C--CCCChHHHHHHHHHcCCCC
Confidence 35566777889 678899998887765554 235656554310 0 0 111112222 2334311
Q ss_pred CCceEEEeCCcCcHHHHhccccc-eeeCCC
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKES-YMVPPN 223 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 223 (515)
...++.+|||.+|+..-+.||-. +.|+..
T Consensus 105 ~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g 134 (196)
T 2oda_A 105 LEGCVLISGDPRLLQSGLNAGLWTIGLASC 134 (196)
T ss_dssp STTCEEEESCHHHHHHHHHHTCEEEEESSS
T ss_pred CccEEEEeCCHHHHHHHHHCCCEEEEEccC
Confidence 23578899999999999999975 446543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.00015 Score=70.38 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=62.9
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|++.+ .++++| .++|+|+++...++.++++ +|++++++.- ..+.|.+.++++-.
T Consensus 136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~------------------~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNL------------------SPEDKVRIIEKLKQ 196 (263)
Confidence 35565544 666789 6678999999999999998 9987655422 12346666666533
Q ss_pred CCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
. ...++.+|||.+|+++++.|+.++++..
T Consensus 197 ~--~~~~~~VGD~~~D~~aa~~Agv~va~g~ 225 (263)
T 2yj3_A 197 N--GNKVLMIGDGVNDAAALALADVSVAMGN 225 (263)
Confidence 2 3457889999999999999998877753
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0003 Score=66.99 Aligned_cols=43 Identities=16% Similarity=0.049 Sum_probs=29.8
Q ss_pred ccHHHHHHHHhcCCCC--CceEEEeCCc-CcHHHHhcccccee-eCC
Q 042288 180 KNKAGALMKMLGDDEE--MPDIGLGDRK-TDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~--~~~~aygDS~-~DlpmL~~a~~~~~-Vnp 222 (515)
.-|...++..+...+. ..++++|||. +|+.|.+.+|...+ |+.
T Consensus 179 Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~ 225 (259)
T 2ho4_A 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKT 225 (259)
T ss_dssp TTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 3455666665544322 3479999998 99999999997654 543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0008 Score=76.27 Aligned_cols=97 Identities=15% Similarity=0.058 Sum_probs=69.5
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceEEEeCceeeeE-------------------
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEICVYKGRSTGF------------------- 170 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l~~~~G~~tG~------------------- 170 (515)
+.++|++. +.++++| +++++||-....++.+|++ +|++. ++. +..++|.
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~------~~~l~g~~~~~~~~~~~l~~~~~~~~ 559 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSALLGTHKDANLASIPVEELIEKAD 559 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCST------TSSCCBGGGGTTSCCSCHHHHHHTSC
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCC------cceeeccccccccchhHHHHHHhhCc
Confidence 34566555 4677899 7788999999999999999 99842 111 1112221
Q ss_pred EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 171 VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 171 i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+-. .+ ..++|.+.++.+... .+...+.||+.||.|||+.|+.++++..
T Consensus 560 v~a-rv-~P~~K~~iV~~lq~~--g~~Vam~GDGvNDapaLk~AdvGIAmg~ 607 (885)
T 3b8c_A 560 GFA-GV-FPEHKYEIVKKLQER--KHIVGMTGDGVNDAPALKKADIGIAVAD 607 (885)
T ss_dssp CEE-CC-CHHHHHHHHHHHHHT--TCCCCBCCCSSTTHHHHHHSSSCCCCSS
T ss_pred EEE-EE-CHHHHHHHHHHHHHC--CCeEEEEcCCchhHHHHHhCCEeEEeCC
Confidence 000 12 567899999888764 3556778999999999999999999974
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0019 Score=62.45 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=23.2
Q ss_pred HHHHHHHHhCC-CEEEEecCc---HHHHHHHHHhhcCCc
Q 042288 119 PETWRVFSSCG-RRCVLTANP---RIMVEAFLKDFLGAD 153 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~---~~~v~~ia~~~lGid 153 (515)
.++++.++++| .++|+|+++ ...+....+. +|++
T Consensus 107 ~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~ 144 (258)
T 2i33_A 107 IDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAP 144 (258)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCS
T ss_pred HHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCC
Confidence 35556777899 567799988 3445555566 7876
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00069 Score=64.92 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=39.8
Q ss_pred cccHHHHHHHHhcCC---CCCceEEEeCCcCcHHHHhccccceee-CCC-CCCCcccc
Q 042288 179 GKNKAGALMKMLGDD---EEMPDIGLGDRKTDSLFLNLCKESYMV-PPN-PKVDPVSQ 231 (515)
Q Consensus 179 g~~K~~~l~~~~~~~---~~~~~~aygDS~~DlpmL~~a~~~~~V-np~-~~l~~~A~ 231 (515)
|..|...|+.++... +...++|+|||.||++||+.|+.++++ |.+ ++++..|.
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~ 234 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSS 234 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESS
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhce
Confidence 446888887776541 234579999999999999999999999 554 55776553
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.66 E-value=5.4e-05 Score=71.11 Aligned_cols=24 Identities=17% Similarity=0.044 Sum_probs=20.5
Q ss_pred eEEEeCCcCcHHHHhcccccee-eC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYM-VP 221 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~-Vn 221 (515)
++.+|||.+|+..-+.+|-..+ |.
T Consensus 161 ~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 161 RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 8889999999999999997654 44
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0005 Score=65.90 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=41.8
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++|+|||.||++||+.|+.++++ |..+.+++.|.
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~ 236 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVAD 236 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCS
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCC
Confidence 466788888877654322 3479999999999999999999999 56666776664
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.008 Score=62.26 Aligned_cols=84 Identities=20% Similarity=0.275 Sum_probs=51.8
Q ss_pred HHHHHHHHhCC-CEEEEecCc---------HHH---HHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccccH-
Q 042288 119 PETWRVFSSCG-RRCVLTANP---------RIM---VEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGKNK- 182 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~---------~~~---v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~~K- 182 (515)
.++++.|+++| .++|+|... ..+ ++.+.+. +|+ |.++|++- + +..|
T Consensus 93 ~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~fd~i~~~~~---------------~--~~~KP 154 (416)
T 3zvl_A 93 PKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVPFQVLVATHA---------------G--LNRKP 154 (416)
T ss_dssp HHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSCCEEEEECSS---------------S--TTSTT
T ss_pred HHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCCEEEEEECCC---------------C--CCCCC
Confidence 46677788899 567789854 333 7888887 884 55555431 1 1123
Q ss_pred ----HHHHHHHhc---CCCCCceEEEeCCc-----------------CcHHHHhccccceee
Q 042288 183 ----AGALMKMLG---DDEEMPDIGLGDRK-----------------TDSLFLNLCKESYMV 220 (515)
Q Consensus 183 ----~~~l~~~~~---~~~~~~~~aygDS~-----------------~DlpmL~~a~~~~~V 220 (515)
...+.+.++ .-+...++.+|||. +|+..-..+|-.++.
T Consensus 155 ~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 155 VSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp SSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred CHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 223333333 11123478899997 788888888887543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0029 Score=60.14 Aligned_cols=43 Identities=26% Similarity=0.241 Sum_probs=38.0
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcc--ccceeeCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLC--KESYMVPPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a--~~~~~Vnp~ 223 (515)
.|..|..+|+.++... + ++|+|||.||++||+.| +.++++...
T Consensus 157 ~~~~Kg~al~~l~~~~--g-via~GD~~ND~~Ml~~a~~g~~vam~Na 201 (239)
T 1u02_A 157 PGVNKGSAIRSVRGER--P-AIIAGDDATDEAAFEANDDALTIKVGEG 201 (239)
T ss_dssp TTCCHHHHHHHHHTTS--C-EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred CCCCHHHHHHHHHhhC--C-eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence 4668999999998874 4 89999999999999999 999999765
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0012 Score=63.45 Aligned_cols=54 Identities=20% Similarity=0.174 Sum_probs=42.7
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...|+.++...+. ..++++|||.||++|++.|+.++++ |..+++++.|.
T Consensus 191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad 247 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVAD 247 (268)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcC
Confidence 456788888887765432 3479999999999999999999998 56677777664
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0028 Score=58.19 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=24.7
Q ss_pred CcHHHH---HHHHhC-C-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 117 LHPETW---RVFSSC-G-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 117 ~~~~~~---~~l~~~-G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
.+|.+. +.++++ | ...|+|+++...++...+. +|+.
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~ 116 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWV 116 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHH
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchH
Confidence 455554 466678 8 5678999987777777666 6653
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.49 E-value=0.021 Score=55.59 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=37.8
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceE-EEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEI-CVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l-~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.++++| .++++||-+...+.++.+. +|++. ++|..- .+.+. +|++....+ ...+.++.+-+++..
T Consensus 32 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~--~~~~~~~~~-~~~~~~~~i~~~l~~ 99 (288)
T 1nrw_A 32 QAQRDGIEVVVSTGRAHFDVMSIFEP-LGIKTWVISANGAVIHDP--EGRLYHHET-IDKKRAYDILSWLES 99 (288)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHGG-GTCCCEEEEGGGTEEECT--TCCEEEECC-CCHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCcEEEcCCeEEEcC--CCcEEEEee-CCHHHHHHHHHHHHH
Confidence 344578 4567899998889999998 88863 555431 11110 233332223 344566666666654
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.0024 Score=58.35 Aligned_cols=35 Identities=6% Similarity=-0.097 Sum_probs=26.2
Q ss_pred CcHHHHH---HHHhC-C-CEEEEecCcHHHHHHHHHhhcCC
Q 042288 117 LHPETWR---VFSSC-G-RRCVLTANPRIMVEAFLKDFLGA 152 (515)
Q Consensus 117 ~~~~~~~---~l~~~-G-~~vivSaS~~~~v~~ia~~~lGi 152 (515)
++|.+.+ .++++ | .++|+|+++...++.+.+. +|+
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl 113 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW 113 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc
Confidence 5565555 56678 8 5678999988888888887 775
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.0041 Score=60.11 Aligned_cols=54 Identities=17% Similarity=0.348 Sum_probs=40.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.++...+. ..++++|||.||++|++.|+.++++ |..+.++..|.
T Consensus 188 ~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~ 244 (271)
T 1rlm_A 188 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR 244 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCC
Confidence 456788887777654222 3479999999999999999999998 56666665554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.0044 Score=60.33 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=40.4
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+ ...++++|||.||++|++.|+.++++ |.++.++..|.
T Consensus 195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~ 251 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN 251 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCC
Confidence 45678888887765422 23479999999999999999999998 55555655443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=95.20 E-value=0.011 Score=55.08 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=57.4
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| .++|+|+++. ..++.+.+. +|+ +.++.+.... +|.+. .... .+..+.
T Consensus 62 ~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~-~g~~~-~~~~-~~~~~K 137 (218)
T 2o2x_A 62 LPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVFVDMVLACAYHE-AGVGP-LAIP-DHPMRK 137 (218)
T ss_dssp HHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCCCSEEEEECCCT-TCCST-TCCS-SCTTST
T ss_pred HHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCceeeEEEeecCC-CCcee-eccc-CCccCC
Confidence 35566777889 6788999987 688888887 885 4433221110 12111 0001 110122
Q ss_pred cHHHHHHHH---hcCCCCCceEEEeCCcCcHHHHhccccce--eeCC
Q 042288 181 NKAGALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKESY--MVPP 222 (515)
Q Consensus 181 ~K~~~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~~--~Vnp 222 (515)
-|...++.. ++.. ...++++|||.+|+.+.+.+|-.. .|..
T Consensus 138 P~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~ 183 (218)
T 2o2x_A 138 PNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDG 183 (218)
T ss_dssp TSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETC
T ss_pred CCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCEeEEEec
Confidence 232333333 3321 234788999999999999999864 4554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.0062 Score=58.02 Aligned_cols=52 Identities=15% Similarity=0.101 Sum_probs=40.3
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPV 229 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~ 229 (515)
.|..|...++.++...+. ..++++|||.||++|++.++.++++ |..+.++..
T Consensus 159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 456788888887655332 3479999999999999999999999 555666664
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.018 Score=55.09 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=36.9
Q ss_pred ccHHHHHHHHhcCCCC----CceEEEeCCcCcHHHHhccccceeeC-CCC
Q 042288 180 KNKAGALMKMLGDDEE----MPDIGLGDRKTDSLFLNLCKESYMVP-PNP 224 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~----~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~ 224 (515)
..|...++.++...+. ..++++|||.||++|++.|+.++++. ..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 4688888888776543 45799999999999999999999995 444
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.87 E-value=0.0079 Score=58.62 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=39.5
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
.|..|...++.++...+. ..++++|||.||++|++.|+.++++. +.+.++..|
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a 268 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIA 268 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHC
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhC
Confidence 466788877777654322 34799999999999999999999984 455555444
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.012 Score=57.16 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=35.1
Q ss_pred ccccHHHHHHHHhcCCC---CCc--eEEEeCCcCcHHHHhccccceee-CCC
Q 042288 178 VGKNKAGALMKMLGDDE---EMP--DIGLGDRKTDSLFLNLCKESYMV-PPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~---~~~--~~aygDS~~DlpmL~~a~~~~~V-np~ 223 (515)
.|..|...++.++...+ ... ++++|||.||++||+.|+.++++ |..
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~ 237 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLN 237 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCC
Confidence 45578887776654321 234 89999999999999999999999 555
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.43 E-value=0.082 Score=51.02 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=28.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEec
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGT 158 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt 158 (515)
++++.++++| .++++||-+...++++.+. +|++ .+||.
T Consensus 33 ~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~I~~ 73 (275)
T 1xvi_A 33 PWLTRLREANVPVILCSSKTSAEMLYLQKT-LGLQGLPLIAE 73 (275)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCTTSCEEEG
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCeEEEe
Confidence 3445566688 6778999999999999998 9986 25543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.041 Score=50.92 Aligned_cols=99 Identities=18% Similarity=0.115 Sum_probs=56.6
Q ss_pred HHHHHHHHhCC-CEEEEecCc---------------HHHHHHHHHhhcCCc--EEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANP---------------RIMVEAFLKDFLGAD--MVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~---------------~~~v~~ia~~~lGid--~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| .++|+|++. ...++.+.+. +|++ .++.+.-. .++ .+|... ..+..+.
T Consensus 56 ~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~f~~~~~~~~~-~~~-~~~~~~-~~~~~~K 131 (211)
T 2gmw_A 56 IDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVDLDGIYYCPHH-PQG-SVEEFR-QVCDCRK 131 (211)
T ss_dssp HHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCCCSEEEEECCB-TTC-SSGGGB-SCCSSST
T ss_pred HHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCceEEEEECCcC-CCC-cccccC-ccCcCCC
Confidence 35566788899 567799998 4778888887 8864 43322110 011 111000 0110122
Q ss_pred cHHHHHHHH---hcCCCCCceEEEeCCcCcHHHHhccccc--eeeCC
Q 042288 181 NKAGALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKES--YMVPP 222 (515)
Q Consensus 181 ~K~~~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~--~~Vnp 222 (515)
-|...++.. ++.. ...++++|||.+|+.+.+.+|-. +.|..
T Consensus 132 P~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~ 177 (211)
T 2gmw_A 132 PHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRT 177 (211)
T ss_dssp TSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESS
T ss_pred CCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEec
Confidence 223333333 3321 24478899999999999999976 55654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.056 Score=51.54 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=14.1
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
.++++||+||||++++
T Consensus 8 ~kli~~DlDGTLl~~~ 23 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV 23 (268)
T ss_dssp CSEEEEECBTTTEETT
T ss_pred CCEEEEcCcCcEECCC
Confidence 5899999999999854
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.85 E-value=0.011 Score=56.95 Aligned_cols=53 Identities=17% Similarity=0.116 Sum_probs=38.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A 230 (515)
.|..|...++..+...+ ...++++|||.||++|++.|+.++++ |..+.++..|
T Consensus 187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a 242 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEAS 242 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHC
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhC
Confidence 45578887777655322 23479999999999999999999998 4455555444
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.005 Score=58.56 Aligned_cols=52 Identities=19% Similarity=0.128 Sum_probs=35.8
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhcccc-ceeeC-CCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNLCKE-SYMVP-PNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~a~~-~~~Vn-p~~~l~~~A 230 (515)
.|..|...|+.+++- +...++|+|| |.||++||+.++. ++.|. ..+.++++|
T Consensus 185 ~~~~Kg~al~~l~~i-~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A 242 (246)
T 2amy_A 185 DGWDKRYCLRHVEND-GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE 242 (246)
T ss_dssp TTCSGGGGGGGTTTS-CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred CCCchHHHHHHHhCC-CHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHH
Confidence 456788888887322 2345799999 9999999999887 78774 455555544
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=93.81 E-value=0.014 Score=55.73 Aligned_cols=53 Identities=13% Similarity=0.161 Sum_probs=38.4
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
.+..|...++..+...+ ...++++|||.||++|++.|+.++++. ..+.++..|
T Consensus 184 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a 239 (261)
T 2rbk_A 184 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAA 239 (261)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhC
Confidence 45678887777654322 235799999999999999999999984 444454444
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.77 E-value=0.07 Score=51.66 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=25.1
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++++.++++| .++++||-+...+.++.+. +|++
T Consensus 29 ~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~-l~l~ 62 (282)
T 1rkq_A 29 NAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHME 62 (282)
T ss_dssp HHHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCC
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCC
Confidence 3445566689 5567899988888999998 8986
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.77 E-value=0.045 Score=53.80 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=40.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++|++.|+.++++. ..+.++..|.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~ 277 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAK 277 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSS
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCC
Confidence 456788888887654322 34799999999999999999999985 4444554443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.70 E-value=0.088 Score=50.10 Aligned_cols=15 Identities=33% Similarity=0.605 Sum_probs=13.4
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
.++++||+||||+++
T Consensus 6 ~kli~~DlDGTLl~~ 20 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNG 20 (266)
T ss_dssp CSEEEEECSSSTTCH
T ss_pred CCEEEEeCcCceEeC
Confidence 579999999999984
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.021 Score=48.08 Aligned_cols=86 Identities=13% Similarity=0.020 Sum_probs=51.8
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC-
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE- 194 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~- 194 (515)
+++.++++| .++|+|+++...++.+.+. +|+ +.++++.-. + ...-+.+.++..+...+
T Consensus 26 ~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~-----------~----~~Kp~~~~~~~~~~~~~~ 89 (137)
T 2pr7_A 26 LLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGEL-----------G----VEKPEEAAFQAAADAIDL 89 (137)
T ss_dssp HHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHH-----------S----CCTTSHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccC-----------C----CCCCCHHHHHHHHHHcCC
Confidence 455677789 5677999988888888887 764 445443210 0 01111223333322211
Q ss_pred -CCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 195 -EMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 195 -~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
...++.+|||.+|+.+.+.+|-. +.++.
T Consensus 90 ~~~~~~~vgD~~~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 90 PMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred CcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence 23478899999999999998854 44554
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=93.10 E-value=0.32 Score=43.78 Aligned_cols=87 Identities=14% Similarity=0.178 Sum_probs=54.1
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---HHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHH--HH---
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---IMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKA--GA--- 185 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~--~~--- 185 (515)
.++++.++++| .++|+|.++. ..++.+.+. +|++ .++++.-.+. . .+..|. +.
T Consensus 40 ~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~-----------~--~~~~KP~p~~~~~ 105 (189)
T 3ib6_A 40 KETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQ-----------P--GKMEKPDKTIFDF 105 (189)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSS-----------T--TCCCTTSHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEcccccc-----------c--cCCCCcCHHHHHH
Confidence 35566778899 5678998776 888889898 9974 3333321000 0 022232 22
Q ss_pred HHHHhcCCCCCceEEEeCC-cCcHHHHhccccceee
Q 042288 186 LMKMLGDDEEMPDIGLGDR-KTDSLFLNLCKESYMV 220 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS-~~DlpmL~~a~~~~~V 220 (515)
+.+.++.. ...++.+||| .+|+.+-+.+|-..+.
T Consensus 106 ~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~ 140 (189)
T 3ib6_A 106 TLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIW 140 (189)
T ss_dssp HHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEE
T ss_pred HHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEE
Confidence 22333431 3457889999 7999999999987653
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=91.95 E-value=0.13 Score=45.99 Aligned_cols=92 Identities=13% Similarity=0.143 Sum_probs=54.4
Q ss_pred HHHHHHHHhCC-CEEEEecC---------------cHHHHHHHHHhhcCCc--EEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTAN---------------PRIMVEAFLKDFLGAD--MVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS---------------~~~~v~~ia~~~lGid--~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| .++|+|.+ +...++.+.+. +|++ .++.+ +...... .+.
T Consensus 48 ~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~v~~s----------~~~~~~~--~~~ 114 (176)
T 2fpr_A 48 IPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQFDEVLIC----------PHLPADE--CDC 114 (176)
T ss_dssp HHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCCEEEEEEE----------CCCGGGC--CSS
T ss_pred HHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCCeeEEEEc----------CCCCccc--ccc
Confidence 35566777899 66789998 78888999998 8875 33221 0000000 111
Q ss_pred cH--HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccce-eeCCC
Q 042288 181 NK--AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESY-MVPPN 223 (515)
Q Consensus 181 ~K--~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~-~Vnp~ 223 (515)
.| .+.++..+...+ ...++++|||.+|+..-+.+|-.. .|++.
T Consensus 115 ~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 115 RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 22 223333332211 234788999999999999999864 45554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=91.74 E-value=0.13 Score=49.21 Aligned_cols=52 Identities=17% Similarity=0.043 Sum_probs=37.3
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhcccc-ceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNLCKE-SYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~a~~-~~~V-np~~~l~~~A 230 (515)
.|..|...|+.+++- +...++|+|| |.||++||+.++. ++.| |.++.+++.|
T Consensus 194 ~~vsKg~al~~l~gi-~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a 251 (262)
T 2fue_A 194 EGWDKRYCLDSLDQD-SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 251 (262)
T ss_dssp TTCSTTHHHHHHTTS-CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCC-CHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhh
Confidence 566788899888332 2345799999 9999999998774 7776 4455555544
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=90.71 E-value=0.095 Score=44.39 Aligned_cols=17 Identities=29% Similarity=0.608 Sum_probs=14.3
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
+++++||+||||++.+.
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 36899999999998654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=90.67 E-value=0.072 Score=50.74 Aligned_cols=45 Identities=18% Similarity=0.006 Sum_probs=33.6
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCC----cCcHHHHhccc-cceee-CCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDR----KTDSLFLNLCK-ESYMV-PPNP 224 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS----~~DlpmL~~a~-~~~~V-np~~ 224 (515)
.|..|...|+.++. ....++|+||+ .||++||+.++ ..+.| ||+.
T Consensus 184 ~gv~Kg~al~~L~~--~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 184 VGWDKTYCLQFVED--DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp TTCSGGGGGGGTTT--TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CCCCHHHHHHHHHc--CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 56789999998877 35678999996 99999999664 34444 4433
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.04 E-value=0.19 Score=43.67 Aligned_cols=15 Identities=33% Similarity=0.547 Sum_probs=13.7
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
+++++||+||||+..
T Consensus 3 ~k~i~~DlDGTL~~~ 17 (142)
T 2obb_A 3 AMTIAVDFDGTIVEH 17 (142)
T ss_dssp CCEEEECCBTTTBCS
T ss_pred CeEEEEECcCCCCCC
Confidence 689999999999994
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=87.46 E-value=0.18 Score=44.92 Aligned_cols=22 Identities=18% Similarity=0.083 Sum_probs=16.8
Q ss_pred eEEEeCCcCcHHHHhccccceeeC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
++++|||.+|+. ..+|..+.++
T Consensus 131 ~l~ieDs~~~i~--~aaG~~i~~~ 152 (180)
T 3bwv_A 131 DYLIDDNPKQLE--IFEGKSIMFT 152 (180)
T ss_dssp SEEEESCHHHHH--HCSSEEEEEC
T ss_pred cEEecCCcchHH--HhCCCeEEeC
Confidence 688999999985 6677555565
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=85.50 E-value=0.29 Score=46.20 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=20.9
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEE
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVI 156 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vi 156 (515)
.++++| +.+++||-+...+.++.+. +|++.++
T Consensus 31 ~l~~~G~~~~~aTGR~~~~~~~~~~~-l~~~~~i 63 (258)
T 2pq0_A 31 RLKQSGVYVAIATGRAPFMFEHVRKQ-LGIDSFV 63 (258)
T ss_dssp HHHHTTCEEEEECSSCGGGSHHHHHH-HTCCCEE
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHh-cCCCEEE
Confidence 344467 4456788776677777777 7776544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=84.76 E-value=0.4 Score=45.09 Aligned_cols=17 Identities=41% Similarity=0.464 Sum_probs=14.8
Q ss_pred CCeEEEEecCCccccCC
Q 042288 27 EKDTVVADVDGTLLRGR 43 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~d 43 (515)
..++++||+||||++.+
T Consensus 5 ~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CSEEEEEESBTTTBCTT
T ss_pred CceEEEEECCCCcCCCC
Confidence 46899999999999854
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=83.90 E-value=0.35 Score=45.78 Aligned_cols=14 Identities=50% Similarity=0.726 Sum_probs=13.1
Q ss_pred CeEEEEecCCcccc
Q 042288 28 KDTVVADVDGTLLR 41 (515)
Q Consensus 28 ~~lavFD~DgTL~~ 41 (515)
.++++||+||||++
T Consensus 12 iKli~~DlDGTLl~ 25 (268)
T 3r4c_A 12 IKVLLLDVDGTLLS 25 (268)
T ss_dssp CCEEEECSBTTTBC
T ss_pred eEEEEEeCCCCCcC
Confidence 58999999999998
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=83.62 E-value=0.38 Score=45.54 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=14.1
Q ss_pred eEEEEecCCccccCCC
Q 042288 29 DTVVADVDGTLLRGRS 44 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds 44 (515)
++++||+||||++.+.
T Consensus 3 kli~~DlDGTLl~~~~ 18 (261)
T 2rbk_A 3 KALFFDIDGTLVSFET 18 (261)
T ss_dssp CEEEECSBTTTBCTTT
T ss_pred cEEEEeCCCCCcCCCC
Confidence 7999999999999654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=83.19 E-value=0.39 Score=45.46 Aligned_cols=14 Identities=57% Similarity=0.843 Sum_probs=12.3
Q ss_pred EEEEecCCccccCC
Q 042288 30 TVVADVDGTLLRGR 43 (515)
Q Consensus 30 lavFD~DgTL~~~d 43 (515)
+++||+||||++.+
T Consensus 2 li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 2 IVFTDLDGTLLDER 15 (259)
T ss_dssp EEEECCCCCCSCSS
T ss_pred EEEEeCCCCCcCCC
Confidence 78999999999853
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=83.04 E-value=0.39 Score=45.61 Aligned_cols=26 Identities=19% Similarity=0.088 Sum_probs=21.2
Q ss_pred CceEEEeCC-cCcHHHHhccccc-eeeC
Q 042288 196 MPDIGLGDR-KTDSLFLNLCKES-YMVP 221 (515)
Q Consensus 196 ~~~~aygDS-~~DlpmL~~a~~~-~~Vn 221 (515)
..++++||| .+|+.|.+.+|.. +.|.
T Consensus 200 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 227 (264)
T 3epr_A 200 NQAVMVGDNYLTDIMAGINNDIDTLLVT 227 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred ccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 447999999 7999999999974 4464
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=82.82 E-value=0.43 Score=45.55 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=33.2
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEeceE--EEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIGTEI--CVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vigt~l--~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.++++| .++++||-+..-++++.+. ++. +.+||..- ...+| ++..... ...+.++.+-+.+.+
T Consensus 32 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~----~~i~~~~-l~~~~~~~i~~~~~~ 98 (271)
T 1rlm_A 32 ELKKRGIKFVVASGNQYYQLISFFPE-LKDEISFVAENGALVYEHG----KQLFHGE-LTRHESRIVIGELLK 98 (271)
T ss_dssp HHHHHTCEEEEECSSCHHHHGGGCTT-TTTTSEEEEGGGTEEEETT----EEEEECC-CCHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEEEeCCcHHHHHHHHHh-cCCCCEEEECCccEEEECC----eEEEEec-CCHHHHHHHHHHHHh
Confidence 444567 4566888887777777776 664 34553221 11222 2222122 344556666666654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=82.69 E-value=0.46 Score=45.29 Aligned_cols=67 Identities=10% Similarity=-0.079 Sum_probs=37.8
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceE-EEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEI-CVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l-~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
+++. +++| .++++||-+...++++.+. +|++. ++|..- .+.+. +|++..... ...+.++.+.+.+.+
T Consensus 27 al~~-~~~Gi~v~iaTGR~~~~~~~~~~~-l~~~~~~~I~~NGa~i~~~--~~~~i~~~~-l~~~~~~~i~~~~~~ 97 (268)
T 1nf2_A 27 NIEK-LSRKCYVVFASGRMLVSTLNVEKK-YFKRTFPTIAYNGAIVYLP--EEGVILNEK-IPPEVAKDIIEYIKP 97 (268)
T ss_dssp HHHH-HTTTSEEEEECSSCHHHHHHHHHH-HSSSCCCEEEGGGTEEEET--TTEEEEECC-BCHHHHHHHHHHHGG
T ss_pred HHHH-HhCCCEEEEECCCChHHHHHHHHH-hCCCCCeEEEeCCeEEECC--CCCEEEecC-CCHHHHHHHHHHHHh
Confidence 3444 5578 5567899988889999998 89863 554431 11110 233332222 344555666666554
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=82.26 E-value=0.6 Score=41.60 Aligned_cols=18 Identities=33% Similarity=0.573 Sum_probs=15.4
Q ss_pred CCeEEEEecCCccccCCC
Q 042288 27 EKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds 44 (515)
..++++||+||||+++..
T Consensus 8 ~ikliv~D~DGtL~d~~~ 25 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHI 25 (168)
T ss_dssp CCCEEEEECCCCCSCSCC
T ss_pred cCcEEEEeCccceECCcE
Confidence 468999999999999753
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.20 E-value=0.44 Score=44.61 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=30.4
Q ss_pred cccHHHHHHHHhcCCC--CCceEEEeCCc-CcHHHHhcccccee-eC
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGLGDRK-TDSLFLNLCKESYM-VP 221 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~aygDS~-~DlpmL~~a~~~~~-Vn 221 (515)
+..|...++..+...+ ...++++|||. ||++|++.||.+++ |+
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~ 235 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVR 235 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEc
Confidence 3445666665543322 23479999998 99999999999876 44
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=81.94 E-value=0.58 Score=44.54 Aligned_cols=17 Identities=47% Similarity=0.599 Sum_probs=14.4
Q ss_pred CCeEEEEecCCccccCC
Q 042288 27 EKDTVVADVDGTLLRGR 43 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~d 43 (515)
..++++||+||||++.+
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 36899999999999854
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=81.48 E-value=0.42 Score=45.11 Aligned_cols=27 Identities=22% Similarity=0.049 Sum_probs=22.0
Q ss_pred CceEEEeCC-cCcHHHHhccccc-eeeCC
Q 042288 196 MPDIGLGDR-KTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 196 ~~~~aygDS-~~DlpmL~~a~~~-~~Vnp 222 (515)
..++++||| .+|+.+.+.+|-. +.|+.
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~ 229 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTS 229 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECC
Confidence 457899999 6999999999976 45654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=81.22 E-value=0.53 Score=44.55 Aligned_cols=16 Identities=44% Similarity=0.555 Sum_probs=14.1
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
.++++||+||||++.+
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 5899999999999854
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=80.94 E-value=1.4 Score=44.80 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=27.8
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
.+|.+.+ .++++| ..+|+|+++...++.+.+. +|++
T Consensus 216 l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~ 255 (384)
T 1qyi_A 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLL 255 (384)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCG
T ss_pred cCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCCh
Confidence 4555555 566789 5678999999999999997 8864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.86 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.73 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.68 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.57 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.46 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.21 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.56 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.55 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.42 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.28 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.23 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.2 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.15 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.13 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 98.09 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 98.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.99 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 97.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.82 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.8 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.75 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 97.69 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.67 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.66 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.63 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 97.6 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.52 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.45 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.41 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.29 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.26 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.2 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.19 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.94 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.81 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.8 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 96.73 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.67 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 96.57 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.54 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 96.52 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.38 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 95.96 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.14 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 94.48 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 93.51 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 93.31 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 93.27 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 89.31 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 87.33 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 85.54 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 85.2 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 84.77 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 84.11 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 84.08 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 84.07 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 83.3 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 82.81 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 82.75 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.69 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 80.33 |
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.4e-22 Score=191.59 Aligned_cols=195 Identities=17% Similarity=0.106 Sum_probs=134.4
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
.++.++|||||||+++++ +..+... .+.......+. ..+..+.+...+. +++ ....++|...+.++.+.+
T Consensus 9 ~~~aV~FD~DGTLi~~e~-~~~l~~~-~g~~~~~~~~~------~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 78 (217)
T d1nnla_ 9 SADAVCFDVDSTVIREEG-IDELAKI-CGVEDAVSEMT------RRAMGGAVPFKAA-LTE-RLALIQPSREQVQRLIAE 78 (217)
T ss_dssp HCSEEEEETBTTTBSSCH-HHHHHHH-TTCTTTC------------------CHHHH-HHH-HHHHHCCCHHHHHHHHHH
T ss_pred CCCEEEEcCccccCCccH-HHHHHHH-cCChHHHHHHH------HHHHcCCCCHHHH-HHH-HHHhcccchHHHHHHHHh
Confidence 356789999999999765 5555432 22111111110 1111111221221 222 235678876666554433
Q ss_pred HHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEe-CceeeeEEecCCcccc
Q 042288 107 AVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVY-KGRSTGFVKSPGVLVG 179 (515)
Q Consensus 107 ~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~-~G~~tG~i~~~~~~~g 179 (515)
.- ..++| ++++.|+++| .++||||+++.+++++++. ||+| +++|+++.++ +|.+||...+.++..+
T Consensus 79 ~~------~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~ 151 (217)
T d1nnla_ 79 QP------PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAES 151 (217)
T ss_dssp SC------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGST
T ss_pred hc------cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeecc
Confidence 21 22444 4555788999 5678999999999999998 9996 6999999987 8999998877655467
Q ss_pred ccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE
Q 042288 180 KNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV 239 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~ 239 (515)
.+|++.++++..+.+...+++||||.||++|++.|+.++++||++.++.+++ +..|.|.
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~-~ad~~i~ 210 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKD-NAKWYIT 210 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHH-HCSEEES
T ss_pred chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHH-hCCCEeC
Confidence 8899998887544223458999999999999999999999999999988887 8889873
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.73 E-value=2.9e-18 Score=171.11 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=113.8
Q ss_pred CCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC-------CCccEEEec----ccchhhhhhcCCeeEEecCCh----
Q 042288 299 TPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG-------RPIPAVTYS----LSRLSELISPIKTVRLTRDRA---- 363 (515)
Q Consensus 299 ~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~-------~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~---- 363 (515)
.|+++ .++++|++|||+|++|+++|..++. +.+.|++|+ .|++++++...|+++|+|.+.
T Consensus 123 ~Ekl~-----~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~ 197 (367)
T d1iuqa_ 123 EEKLQ-----QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDI 197 (367)
T ss_dssp HHHHH-----TTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSS
T ss_pred HHHhc-----CCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEecccccccc
Confidence 56777 5779999999999999999877654 346899997 689999999999999988542
Q ss_pred ------------hhHHHHHHHHHcC-C-eEEecCCeeeC----CCccc--cccchh--------hccCCc--EEEEEEEc
Q 042288 364 ------------TDASMIEKLLEKG-D-LVICPEGTTCR----EPFLL--RFSALF--------AELTDE--VVPVAMSN 413 (515)
Q Consensus 364 ------------~~~~~~~~~l~~G-~-l~IFPEGTrs~----~~~l~--~Fk~Gf--------~~~~~p--VvPV~i~~ 413 (515)
+.++.+.+.|++| . ++|||||||++ ++.+. +|+++. .++++| |+||+|.+
T Consensus 198 p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~ 277 (367)
T d1iuqa_ 198 PELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLC 277 (367)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEEC
T ss_pred ccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhc
Confidence 2266777888888 5 57999999994 34443 577662 357899 99999999
Q ss_pred CccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHH
Q 042288 414 RMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIA 474 (515)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia 474 (515)
+..++...+.... ..+ ....+... +.|.|++||+.+++....++..+..+...+.|-
T Consensus 278 ~d~~pP~~~v~~~-ige--~R~~~~~~-V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~ 334 (367)
T d1iuqa_ 278 HDIMPPPSQVEIE-IGE--KRVIAFNG-AGLSVAPEISFEEIAATHKNPEEVREAYSKALF 334 (367)
T ss_dssp GGGSCCC-------------CCCCCBC-CEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHH
T ss_pred ccccCCCcccccc-hhh--ccccCCCc-eeEEeCCCcchhhhhhhccchHHHHHHHHHHHH
Confidence 7666543311000 000 01222333 899999999877653234555554444444443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.68 E-value=2e-16 Score=145.59 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=126.8
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVA 105 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~ 105 (515)
+..++++||+||||+++++ +..+... . +....... .. ...... ..... .........+.+......+...
T Consensus 2 ~kkKlv~FDlDGTL~d~es-~~~l~~~-~---g~~~~~~~--~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNET-IDEIARE-A---GVEEEVKK--IT-KEAMEG-KLNFE-QSLRKRVSLLKDLPIEKVEKAI 71 (210)
T ss_dssp CCCCEEEECCCCCCBSSCH-HHHHHHH-T---TCHHHHHH--HH-HHHHTT-SSCHH-HHHHHHHHTTTTCBHHHHHHHH
T ss_pred CCCeEEEEeCCCCcCCchH-HHHHHHH-c---CCcHHHHH--HH-HHHhcc-cchhH-HHHHHHHHHHhhhHHHHHHHHh
Confidence 3579999999999999765 5554321 1 11111111 00 111111 11111 1112233456676666665543
Q ss_pred HHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH
Q 042288 106 RAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~ 184 (515)
.... ...-..+.++.++.+| ..+++|++...+++...++ ++.+.++.+.+..+++..++....... .+..|..
T Consensus 72 ~~~~----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 145 (210)
T d1j97a_ 72 KRIT----PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVL-KENAKGE 145 (210)
T ss_dssp HTCC----BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSC-STTHHHH
T ss_pred hhhh----hhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhcccccccccccccccc-ccccccc
Confidence 3321 1123356677888899 5567999999999999998 899999999999999999988877654 6777777
Q ss_pred HHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 185 ALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 185 ~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.++..+...+ ...++++|||.||+||++.||.+|++|+++.+++.|.
T Consensus 146 ~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~Ad 194 (210)
T d1j97a_ 146 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKAD 194 (210)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTCS
T ss_pred hhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhCC
Confidence 6666544321 2347999999999999999999999999999988775
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.57 E-value=3.2e-15 Score=140.17 Aligned_cols=192 Identities=13% Similarity=0.064 Sum_probs=116.5
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
.+.+++|||||||+++++. ..+... .. ......+. ..+..+.+...+ .+... ...+.+...+++.....
T Consensus 3 ~k~lVifD~DGTL~~~d~~-~~~~~~-~~-~~~~~~i~------~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 71 (226)
T d2feaa1 3 RKPFIICDFDGTITMNDNI-INIMKT-FA-PPEWMALK------DGVLSKTLSIKE-GVGRM-FGLLPSSLKEEITSFVL 71 (226)
T ss_dssp CCEEEEECCTTTTBSSCHH-HHHHHH-HS-CTHHHHHH------HHHHTTSSCHHH-HHHHH-HTTSBGGGHHHHHHHHH
T ss_pred CCeEEEEeCCCCCcCchHH-HHHHHH-HC-cchHHHHH------HHHHcCcccHHH-HHHHH-HHHhccccHHHHHHHHH
Confidence 5689999999999998764 333321 11 11111111 111122222111 12211 22233333444443333
Q ss_pred HHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEeceEEEeCceeeeEEe--cCCc---
Q 042288 107 AVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIGTEICVYKGRSTGFVK--SPGV--- 176 (515)
Q Consensus 107 ~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vigt~l~~~~G~~tG~i~--~~~~--- 176 (515)
+-.+ ++|. .++.++++| .++|+|++....+++++++ +|+ ++++|+++.++++..++... .+.+
T Consensus 72 ~~~~------l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~ 144 (226)
T d2feaa1 72 EDAK------IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSN 144 (226)
T ss_dssp HHCC------BCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCS
T ss_pred hccc------hhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceecccccccccccc
Confidence 2222 4444 445677889 6788999999999999998 875 78999999987665554321 1111
Q ss_pred cccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-Ecc
Q 042288 177 LVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHD 242 (515)
Q Consensus 177 ~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~ 242 (515)
..+..|.+.++++-.. ...++++|||.+|++|++.|+.++++++ +..++. +.+.+.+ |++
T Consensus 145 ~k~~~~~~~~~~~~~~--~~~~i~iGDs~~Dl~~a~~A~~~~a~~~---~~~~~~-~~~~~~~~~~d 205 (226)
T d2feaa1 145 QCGCCKPSVIHELSEP--NQYIIMIGDSVTDVEAAKLSDLCFARDY---LLNECR-EQNLNHLPYQD 205 (226)
T ss_dssp CCSSCHHHHHHHHCCT--TCEEEEEECCGGGHHHHHTCSEEEECHH---HHHHHH-HTTCCEECCSS
T ss_pred CCHHHHHHHHHHhcCC--CceEEEEeCchhhHHHHHHCCEEEEecc---hHHHHH-HcCCCeeecCC
Confidence 1456677777765332 4567899999999999999999998866 556666 7777765 543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.46 E-value=2e-13 Score=124.85 Aligned_cols=98 Identities=10% Similarity=0.065 Sum_probs=74.0
Q ss_pred hCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCc
Q 042288 127 SCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRK 205 (515)
Q Consensus 127 ~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~ 205 (515)
.++ ..+++|+++...++++... +++++..+..++..++...+..... .+..+...++ .++.. ...++|+|||.
T Consensus 82 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~-~~eviaiGDg~ 155 (206)
T d1rkua_ 82 RERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLR---QKDPKRQSVI-AFKSL-YYRVIAAGDSY 155 (206)
T ss_dssp HTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECC---SSSHHHHHHH-HHHHT-TCEEEEEECSS
T ss_pred hcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeeccccccccccc---chhhHHHHHH-Hhccc-ccceEEecCCc
Confidence 456 6677999999999999998 9999999999998776666655442 3333333333 33321 45689999999
Q ss_pred CcHHHHhccccceeeCCCCCCCccc
Q 042288 206 TDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 206 ~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
||+|||+.||.+++.||..++++-+
T Consensus 156 NDi~Ml~~Ag~gIAmna~~~v~~~~ 180 (206)
T d1rkua_ 156 NDTTMLSEAHAGILFHAPENVIREF 180 (206)
T ss_dssp TTHHHHHHSSEEEEESCCHHHHHHC
T ss_pred cCHHHHHhCCccEEECCCHHHHHhC
Confidence 9999999999999999988776543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.21 E-value=4.1e-11 Score=116.36 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=86.4
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCcee
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRS 167 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~ 167 (515)
-.|++.+++.+++.+.--. +. .-.++.++.++++| .++|+||++..++++++++ +|++ +++|++++++++.+
T Consensus 117 ~~~l~~~~i~~~v~~~~i~-Lr-~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~ 193 (291)
T d2bdua1 117 EQGIPKAKLKEIVADSDVM-LK-EGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGV 193 (291)
T ss_dssp HHCCBGGGHHHHHHHSCCC-BC-BTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSB
T ss_pred HcCCCHHHHHHHHHhcCCC-cc-cCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCee
Confidence 5589999999877653111 11 13356777888899 7888999999999999998 9986 59999999998888
Q ss_pred eeEEecCCccccccHHHHHH---HHhcCC-CCCceEEEeCCcCcHHHHhcccc
Q 042288 168 TGFVKSPGVLVGKNKAGALM---KMLGDD-EEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 168 tG~i~~~~~~~g~~K~~~l~---~~~~~~-~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
++.+.++ |.....|-..+. ...... +....++.|||.||+.|...+..
T Consensus 194 ~~~~~~~-~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 194 LKGFKGE-LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp EEEECSS-CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred EeeccCC-ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence 8888875 324444443322 222211 13457899999999999987654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.56 E-value=5.7e-08 Score=89.19 Aligned_cols=54 Identities=13% Similarity=-0.029 Sum_probs=42.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.++...+ ...++++|||.||+|||+.|+.+++| |+++.+++.|.
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~ 205 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENAD 205 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCS
T ss_pred CCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCC
Confidence 46678888877654422 23479999999999999999999998 78888887775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.55 E-value=6.8e-08 Score=92.14 Aligned_cols=54 Identities=13% Similarity=0.184 Sum_probs=43.8
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.+++..+. ..++++|||.||++||+.|+.+++| |.++++++.|.
T Consensus 210 ~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~ 266 (285)
T d1nrwa_ 210 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD 266 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCS
T ss_pred ccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 445798888887765432 3479999999999999999999999 67888887775
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=9e-07 Score=80.62 Aligned_cols=81 Identities=17% Similarity=0.142 Sum_probs=55.0
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH-----HHHHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK-----AGALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K-----~~~l~~~ 189 (515)
++++.++++| .+.|+|+++...++.+.+. +|++ .+++++- .+..| .+.+.+.
T Consensus 95 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~-----------------~~~~Kp~~~~~~~~~~~ 156 (218)
T d1te2a_ 95 EAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEK-----------------LPYSKPHPQVYLDCAAK 156 (218)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTT-----------------SSCCTTSTHHHHHHHHH
T ss_pred HHHHHhhhcccccccccccccccccccccc-ccccccccccccccc-----------------cccchhhHHHHHHHHHH
Confidence 4556778899 5678999999999999998 9974 4444321 11122 2233333
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
++-. ...++.+|||.+|+.+-+.+|-..+
T Consensus 157 l~~~-~~~~l~igD~~~di~aA~~~G~~~i 185 (218)
T d1te2a_ 157 LGVD-PLTCVALEDSVNGMIASKAARMRSI 185 (218)
T ss_dssp HTSC-GGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred cCCC-chhcEEEeeCHHHHHHHHHcCCEEE
Confidence 3431 3457889999999999999996554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.28 E-value=3.8e-06 Score=75.79 Aligned_cols=91 Identities=19% Similarity=0.139 Sum_probs=58.7
Q ss_pred CcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCC
Q 042288 117 LHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~ 193 (515)
+++.+.+ .++.+|..+|+|+++...++.+.+. +|++..+. ..+++.- .+..|...++..++..
T Consensus 85 ~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~gl~~~fd-------~v~~~~~------~~~~~p~~~~~~~~~~ 150 (210)
T d2ah5a1 85 LFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKN-LEIHHFFD-------GIYGSSP------EAPHKADVIHQALQTH 150 (210)
T ss_dssp ECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHH-TTCGGGCS-------EEEEECS------SCCSHHHHHHHHHHHT
T ss_pred chhHHHHHHhhhhcccchhhcccccchhhhHHHHh-hccccccc-------ccccccc------cccccccccchhhhhh
Confidence 4555555 4555667888999999999999998 99752221 1111111 2344555555444432
Q ss_pred C--CCceEEEeCCcCcHHHHhccccc-eeeC
Q 042288 194 E--EMPDIGLGDRKTDSLFLNLCKES-YMVP 221 (515)
Q Consensus 194 ~--~~~~~aygDS~~DlpmL~~a~~~-~~Vn 221 (515)
+ ...++.+|||.+|+..-+.+|-. +.|.
T Consensus 151 ~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~ 181 (210)
T d2ah5a1 151 QLAPEQAIIIGDTKFDMLGARETGIQKLAIT 181 (210)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred hcccccceeecCCHHHHHHHHHcCCeEEEEc
Confidence 2 23478899999999999999974 4564
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.23 E-value=1.5e-06 Score=78.72 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=54.0
Q ss_pred CcHHHHHHHHh--CC-CEEEEecCcHHHHHHHHHhhcCCcE----EEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 117 LHPETWRVFSS--CG-RRCVLTANPRIMVEAFLKDFLGADM----VIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 117 ~~~~~~~~l~~--~G-~~vivSaS~~~~v~~ia~~~lGid~----vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+|.+.+.++. ++ ..+|||++....++.+.++ +|++. +++.+- .+ .+.-+...++..
T Consensus 83 ~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~-~~l~~~f~~i~~~~~-----------~~----~~KP~p~~~~~~ 146 (207)
T d2hdoa1 83 LYPGITSLFEQLPSELRLGIVTSQRRNELESGMRS-YPFMMRMAVTISADD-----------TP----KRKPDPLPLLTA 146 (207)
T ss_dssp ECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTT-SGGGGGEEEEECGGG-----------SS----CCTTSSHHHHHH
T ss_pred cccchhhhhhhhccccccccccccccccccccccc-ccccccccccccccc-----------cc----cchhhhhhhccc
Confidence 55666665552 34 6678999999999999998 88642 332221 00 111122333333
Q ss_pred hcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 190 LGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 190 ~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+.+.+ ...++.+|||.+|+..-+.+|-..+
T Consensus 147 ~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i 178 (207)
T d2hdoa1 147 LEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 178 (207)
T ss_dssp HHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred ccceeeeccceeEecCCHHHHHHHHHcCCeEE
Confidence 32211 2347889999999999988888765
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.20 E-value=3e-06 Score=71.92 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=67.2
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP 197 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~ 197 (515)
+++++.+++.| .++++||-....++.++++ +|++++++ .+ ..++|+..+++.-.. ..
T Consensus 27 ~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~~v~~-----------------~~-~p~~k~~~v~~~q~~---~~ 84 (135)
T d2b8ea1 27 KPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIA-----------------EV-LPHQKSEEVKKLQAK---EV 84 (135)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEEC-----------------SC-CHHHHHHHHHHHTTT---SC
T ss_pred HHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhhhhcc-----------------cc-chhHHHHHHHHHHcC---CE
Confidence 34566788999 6778999999999999999 99987654 24 677899888876432 44
Q ss_pred eEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
....||+.||.|+|+.|+-+++++......+
T Consensus 85 v~~vGDg~nD~~aL~~Advgia~~~~~~~~~ 115 (135)
T d2b8ea1 85 VAFVGDGINDAPALAQADLGIAVGSGSDVAV 115 (135)
T ss_dssp EEEEECSSSSHHHHHHSSEEEEECCC-----
T ss_pred EEEEeCCCCcHHHHHhCCeeeecCccCHHHH
Confidence 5567999999999999999999976444433
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.15 E-value=3.5e-06 Score=75.83 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=66.1
Q ss_pred cCCCHHHHHHHHHHHhchhh-cCCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeC
Q 042288 94 AGMKVPSIESVARAVLPKFY-SGDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYK 164 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~-~~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~ 164 (515)
.+...+.+++.-+++..+.. ...++|.+ ++.++++| .+.|+|+++... ..+.++ +|++ .+++++-.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~~-~~~l~~-~gl~~~f~~i~~s~~~--- 133 (204)
T d2go7a1 59 RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNA-FTILKD-LGVESYFTEILTSQSG--- 133 (204)
T ss_dssp HTCCHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHH-HTCGGGEEEEECGGGC---
T ss_pred hhhhHHHHHHHHHHHHHhhcccCcccchHHhhhhcccccccchhhhcccchhh-hhhhhh-cccccccccccccccc---
Confidence 45667777766666554332 22345544 45677899 567789887754 456776 8874 44443310
Q ss_pred ceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccce-eeCCC
Q 042288 165 GRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVPPN 223 (515)
Q Consensus 165 G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp~ 223 (515)
+. ..| ..+-.+.+.+.++-. ...++.+|||.+|+.+-+.+|-.. .|.+.
T Consensus 134 ~~-----~Kp----~~~~~~~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 134 FV-----RKP----SPEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp CC-----CTT----SSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred cc-----cch----hHHHHHHHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 00 001 112222333334431 245788999999999999999654 45543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.13 E-value=8.9e-06 Score=73.70 Aligned_cols=84 Identities=19% Similarity=0.205 Sum_probs=55.4
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCcccccc--HHH---HHHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKN--KAG---ALMK 188 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~--K~~---~l~~ 188 (515)
+++++.++++| ..+|+|+++...++.+.+. +|++ .++++.- .+.. |.. .+.+
T Consensus 101 ~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~-----------------~~~~kp~p~~~~~~~~ 162 (224)
T d2hsza1 101 KETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQS-----------------LPEIKPHPAPFYYLCG 162 (224)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTT-----------------SSSCTTSSHHHHHHHH
T ss_pred HHHHHHHhccCCcccccccccHHHHHHHHHh-cCchhhccccccccc-----------------cccccccchhhHHHHH
Confidence 34455777899 5678999999999999998 9964 4444331 1111 222 2333
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhcccc-ceeeC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKE-SYMVP 221 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~-~~~Vn 221 (515)
.++.. ...++.+|||.+|+..-+.+|- .+.|+
T Consensus 163 ~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 163 KFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp HHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred Hhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 33331 3447889999999999999985 44554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.09 E-value=3.7e-06 Score=74.94 Aligned_cols=86 Identities=15% Similarity=0.087 Sum_probs=52.4
Q ss_pred CCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH--HH
Q 042288 115 GDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--AG 184 (515)
Q Consensus 115 ~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~ 184 (515)
..++|++.+ .++++| ..+|+|.+.+...+ ..+. +|++ .+++++- .+..| .+
T Consensus 78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~-~~l~~~fd~i~~~~~-----------------~~~~KP~p~ 138 (187)
T d2fi1a1 78 PILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEK-TSIAAYFTEVVTSSS-----------------GFKRKPNPE 138 (187)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-TTCGGGEEEEECGGG-----------------CCCCTTSCH
T ss_pred CcccchhHHHHHHHHhhhccccccccCccchhh-hhhh-hcccccccccccccc-----------------ccccCCCHH
Confidence 345555554 567889 56789988887776 5666 7764 3443321 11122 12
Q ss_pred HHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 185 ALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 185 ~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.++..+...+...++.+|||.+|+..-+.+|-..+
T Consensus 139 ~~~~~~~~~~~~~~l~vgDs~~Di~aA~~aG~~~i 173 (187)
T d2fi1a1 139 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTH 173 (187)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCCeEEEeCCHHHHHHHHHcCCEEE
Confidence 22222222223558889999999999999887743
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.01 E-value=3.1e-05 Score=71.03 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=57.3
Q ss_pred cCCCcHHHHHHHHh-CC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH----
Q 042288 114 SGDLHPETWRVFSS-CG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA---- 183 (515)
Q Consensus 114 ~~~~~~~~~~~l~~-~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~---- 183 (515)
....++++.+.+++ +| ...++|.+....++.+.+. +|+ |.+++++- .|..|.
T Consensus 91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~-----------------~~~~KP~p~~ 152 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDA-----------------KRVFKPHPDS 152 (245)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------------GTCCTTSHHH
T ss_pred ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-ccccccccccccccc-----------------ccccCccHHH
Confidence 34567888887775 67 4567899999999988887 774 55555431 122342
Q ss_pred -HHHHHHhcCCCCCceEEEeCCcCcHHHHhccccc-eeeC
Q 042288 184 -GALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVP 221 (515)
Q Consensus 184 -~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vn 221 (515)
....+.++-. ...++.+|||.+|+.-=+.+|-. +.||
T Consensus 153 f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~ 191 (245)
T d1qq5a_ 153 YALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVA 191 (245)
T ss_dssp HHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 2233334432 34578899999999877777754 3354
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.99 E-value=3.1e-05 Score=70.60 Aligned_cols=88 Identities=17% Similarity=0.029 Sum_probs=52.4
Q ss_pred HHHHHHHhCC-CE-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH----HHHHHhcCC
Q 042288 120 ETWRVFSSCG-RR-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG----ALMKMLGDD 193 (515)
Q Consensus 120 ~~~~~l~~~G-~~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~----~l~~~~~~~ 193 (515)
++++.++++| .. .|+|++....++.+.+. +|++..+- ...++. ... ....+.. .+++..+..
T Consensus 98 ~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~gl~~~fd-------~i~~~~---~~~-~~k~~p~~~~~~~~~~~~~~ 165 (228)
T d2hcfa1 98 ELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFP-------FGAFAD---DAL-DRNELPHIALERARRMTGAN 165 (228)
T ss_dssp HHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCS-------CEECTT---TCS-SGGGHHHHHHHHHHHHHCCC
T ss_pred HHHhhhhccccccccccCCCcchhhhhhhhh-hccccccc-------cccccc---ccc-cccchhHHHHHHhhhhcccC
Confidence 3455667788 43 57899999999999998 99742211 111110 001 2222222 333333321
Q ss_pred -CCCceEEEeCCcCcHHHHhcccccee
Q 042288 194 -EEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 194 -~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
....++++|||.+|+.+-+.+|-..+
T Consensus 166 ~~p~~~l~VGD~~~Di~aA~~aG~~~i 192 (228)
T d2hcfa1 166 YSPSQIVIIGDTEHDIRCARELDARSI 192 (228)
T ss_dssp CCGGGEEEEESSHHHHHHHHTTTCEEE
T ss_pred CChhHheeecCChHHHHHHHHcCCEEE
Confidence 12347889999999999999987743
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=97.97 E-value=5.6e-05 Score=68.10 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=55.1
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHH-----HHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG-----ALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~-----~l~~~ 189 (515)
++++.+++.| .+.++|.+....++.+.+. ++. |.++++.- .+..|.. .+.+.
T Consensus 100 ~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~-----------------~~~~KP~p~~~~~~~~~ 161 (220)
T d1zrna_ 100 DSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDP-----------------VQVYKPDNRVYELAEQA 161 (220)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGG-----------------GTCCTTSHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeee-----------------eeccccHHHHHHHHHHH
Confidence 3445667788 5677899999999988886 664 56655541 2223432 23333
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhcccc-ceeeC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKE-SYMVP 221 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~-~~~Vn 221 (515)
++-. ...++.+|||.+|+.-=+.+|- ++.||
T Consensus 162 ~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~ 193 (220)
T d1zrna_ 162 LGLD-RSAILFVASNAWDATGARYFGFPTCWIN 193 (220)
T ss_dssp HTSC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred hCCC-CceEEEEecChHhHHHHHHcCCEEEEEc
Confidence 4431 3457889999999999999994 45676
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.82 E-value=4.1e-05 Score=71.14 Aligned_cols=88 Identities=14% Similarity=-0.040 Sum_probs=53.2
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-----EEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
.+|.+. +.++++| .+.|+|+++...++.+.++ +|++ .+++++- .+. ..|+ .+-.....
T Consensus 100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~-------~~~-~KP~----p~~~~~~~ 166 (257)
T d1swva_ 100 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDD-------VPA-GRPY----PWMCYKNA 166 (257)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGG-------SSC-CTTS----SHHHHHHH
T ss_pred cCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHH-Hhhccccccccccccc-------ccc-cccC----hHHHHHHH
Confidence 455554 4667899 5678999999999999987 7753 2222220 000 0011 11123333
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhccccc
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCKES 217 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~~~ 217 (515)
+.++......++.+|||.+|+..=+.||-.
T Consensus 167 ~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ 196 (257)
T d1swva_ 167 MELGVYPMNHMIKVGDTVSDMKEGRNAGMW 196 (257)
T ss_dssp HHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence 334432123478899999999999998864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.80 E-value=1.8e-06 Score=80.23 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=52.5
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccccCCCCceEE
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQDKLPKPIVF 240 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~~~~~W~i~f 240 (515)
.+..|..+++.+....+. ..++++|||.||+|||+.|+++++| |+++++++.|. ..+|...|
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~-~~~~~~~~ 223 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYD-QWGDSRHY 223 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHH-HHCCTTEE
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhh-cccccceE
Confidence 577898888887665433 3479999999999999999999999 89999999998 88898753
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.75 E-value=0.00025 Score=64.41 Aligned_cols=87 Identities=20% Similarity=0.136 Sum_probs=55.0
Q ss_pred CcHHHHHHHH--hCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH--HHHH
Q 042288 117 LHPETWRVFS--SCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA--GALM 187 (515)
Q Consensus 117 ~~~~~~~~l~--~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~--~~l~ 187 (515)
.+|++.+.++ ++| .++|+|.++...++.+.+. +|+ |.+++++- .+..|. +.++
T Consensus 101 ~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~-----------------~~~~KP~~~~~~ 162 (230)
T d1x42a1 101 LYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEE-----------------AGFFKPHPRIFE 162 (230)
T ss_dssp BCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHH-----------------HTBCTTSHHHHH
T ss_pred ccccHHHHHHHhhccCceeeeeccccccchhhhcc-ccccccccccccccc-----------------ccccchhhHHHH
Confidence 4566666554 356 5567999999999999997 885 55555431 122332 2233
Q ss_pred HH---hcCCCCCceEEEeCC-cCcHHHHhcccccee-eCC
Q 042288 188 KM---LGDDEEMPDIGLGDR-KTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 188 ~~---~~~~~~~~~~aygDS-~~DlpmL~~a~~~~~-Vnp 222 (515)
.. ++-. ...++.+||| .+|+..-+.+|-..+ ++.
T Consensus 163 ~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~ 201 (230)
T d1x42a1 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDR 201 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECT
T ss_pred HHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECC
Confidence 32 3321 2447889999 589998888877653 553
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=97.69 E-value=3.4e-05 Score=67.46 Aligned_cols=92 Identities=17% Similarity=0.175 Sum_probs=51.8
Q ss_pred CcHHHHH---HHHhCCC-EEEEecCcHHHHHHHHHhhcC----CcEEEeceEEEeCceeeeEEecCCccccccHHHH---
Q 042288 117 LHPETWR---VFSSCGR-RCVLTANPRIMVEAFLKDFLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGA--- 185 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~-~vivSaS~~~~v~~ia~~~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~--- 185 (515)
+++++.+ .++.+|+ .+++|+++....+.....+.| +|++++++-. + ...-+.+.
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-----------~----~~Kp~~~~~~~ 149 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL-----------G----MRKPEARIYQH 149 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH-----------T----CCTTCHHHHHH
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccc-----------c----ccccchHHHHH
Confidence 4454444 5667884 566777654444443333113 4667765421 1 01112222
Q ss_pred HHHHhcCCCCCceEEEeCCcCcHHHHhccc-cceeeCCCC
Q 042288 186 LMKMLGDDEEMPDIGLGDRKTDSLFLNLCK-ESYMVPPNP 224 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS~~DlpmL~~a~-~~~~Vnp~~ 224 (515)
+.+.++-. ...++.+|||.+|+.--+.+| +.+.|++..
T Consensus 150 ~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 150 VLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 22334431 244788999999999999999 577787755
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.67 E-value=2.1e-05 Score=71.22 Aligned_cols=108 Identities=12% Similarity=0.127 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHHHhchh---h----cCCCcHHHH---HHHHhCCCE-EEEecCcHHHHHHHHHhhcCCc----EEEece
Q 042288 95 GMKVPSIESVARAVLPKF---Y----SGDLHPETW---RVFSSCGRR-CVLTANPRIMVEAFLKDFLGAD----MVIGTE 159 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~----~~~~~~~~~---~~l~~~G~~-vivSaS~~~~v~~ia~~~lGid----~vigt~ 159 (515)
..+.++++++.+++.+.+ + ....+|.+. +.+++.|.. +++|++. ..+...+. +|+. .++++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~-~~l~~~f~~i~~~~ 139 (221)
T d1o08a_ 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLER-MNLTGYFDAIADPA 139 (221)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHH-TTCGGGCSEECCTT
T ss_pred cchhhhhhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHh-hccccccccccccc
Confidence 456777766665544321 1 122455444 466788854 5567664 35677776 8864 333222
Q ss_pred EEEeCceeeeEEecCCccccccH--HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccc-ceeeCC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNK--AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKE-SYMVPP 222 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K--~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~-~~~Vnp 222 (515)
. .+..| .+.++..+...+ ...++.+|||.+|+..-+.+|- ++.|+.
T Consensus 140 ---------------~--~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 140 ---------------E--VAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp ---------------T--SSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred ---------------c--ccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 0 22223 233333333221 2347889999999999999884 556654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.66 E-value=0.00095 Score=60.88 Aligned_cols=90 Identities=14% Similarity=0.041 Sum_probs=56.9
Q ss_pred CCcHHHHHHHH--hCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH--H--
Q 042288 116 DLHPETWRVFS--SCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA--G-- 184 (515)
Q Consensus 116 ~~~~~~~~~l~--~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~--~-- 184 (515)
..+|++.+.++ ++| .++|+|.++...++...+. +|+ |.+++++ . .+..|. +
T Consensus 109 ~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~----------------~-~~~~KP~p~~~ 170 (247)
T d2gfha1 109 ILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGG----------------E-QKEEKPAPSIF 170 (247)
T ss_dssp CCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGG----------------G-SSSCTTCHHHH
T ss_pred ccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-cccccccccccccc----------------c-cccchhhhhhH
Confidence 36677766443 245 5677999999999998887 885 4444432 1 233452 2
Q ss_pred -HHHHHhcCCCCCceEEEeCCc-CcHHHHhccccc-ee-eCCCC
Q 042288 185 -ALMKMLGDDEEMPDIGLGDRK-TDSLFLNLCKES-YM-VPPNP 224 (515)
Q Consensus 185 -~l~~~~~~~~~~~~~aygDS~-~DlpmL~~a~~~-~~-Vnp~~ 224 (515)
.+.+.++.. ...++.+|||. +|+..-..+|-. ++ +++..
T Consensus 171 ~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~ 213 (247)
T d2gfha1 171 YHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSG 213 (247)
T ss_dssp HHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred HHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCC
Confidence 333334431 23478899995 899999999985 43 45544
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.63 E-value=4.1e-05 Score=66.61 Aligned_cols=87 Identities=8% Similarity=-0.018 Sum_probs=53.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcH-HHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--
Q 042288 119 PETWRVFSSCG-RRCVLTANPR-IMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE-- 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~-~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~-- 194 (515)
.++++.++++| ...|+|.+.+ .+++.+.+. +++++.+.... . ....|.+.+++.+...+
T Consensus 52 ~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~-----------~-----~~kp~~~~~~~~~~~~~~~ 114 (164)
T d1u7pa_ 52 PEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQRE-----------I-----YPGSKVTHFERLHHKTGVP 114 (164)
T ss_dssp HHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEE-----------E-----SSSCHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeee-----------c-----ccCCChHHHHHHHHHhCCC
Confidence 35566788899 6778997654 567777786 88753222111 0 11124444444433221
Q ss_pred CCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
...++.+|||..|+..-+.+|-..+.=+
T Consensus 115 ~~~~l~igD~~~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 115 FSQMVFFDDENRNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp GGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred hHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 2447889999999999999988665433
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.60 E-value=5.8e-05 Score=68.24 Aligned_cols=100 Identities=9% Similarity=-0.046 Sum_probs=59.6
Q ss_pred CCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEec-CCccccccHHHHHHHHhcC
Q 042288 115 GDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKS-PGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 115 ~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~-~~~~~g~~K~~~l~~~~~~ 192 (515)
...++.+.+.+++-+ ..+|+|++.+..++.+.+. +|++..+..-+. ++.-.+ ..+....+-.....+.++-
T Consensus 84 ~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~------~~~~~~~~~~KP~~~~~~~~~~~l~~ 156 (222)
T d2fdra1 84 VKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIY------SAKDLGADRVKPKPDIFLHGAAQFGV 156 (222)
T ss_dssp CCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEE------EHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred cchhhhHHHHhhhccccceeeeecchhhhhhhhcc-cccccccceeec------ccccccccccccCHHHHHHHHHhhCC
Confidence 346677777888755 6678999999999999997 897633222111 111000 0110011112333344443
Q ss_pred CCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
. ...++.+|||..|+..=+.+|-. +.|+.
T Consensus 157 ~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~~ 186 (222)
T d2fdra1 157 S-PDRVVVVEDSVHGIHGARAAGMRVIGFTG 186 (222)
T ss_dssp C-GGGEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred C-CceEEEEcCCHHHHHHHHHcCCEEEEEcc
Confidence 1 34578899999999999988865 34543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.52 E-value=0.00021 Score=64.94 Aligned_cols=174 Identities=13% Similarity=0.097 Sum_probs=106.0
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhccc----CcccHHHHHHHHHH--HcCCCHHHHHH
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYY----VSESAGIRVLIFAT--FAGMKVPSIES 103 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~~~~~~~--~~G~~~~~l~~ 103 (515)
+.++|++|-|.-.|-.+....+ ....+++.+.+ ..+ -.++.... +.....+| ++.-+ -.|.+.+++.+
T Consensus 1 ~fvtDcEGPlslnDnA~E~~a~-~~~~grfF~~l---S~y-DD~L~~E~~reGY~aG~TLK-LIvPFl~a~Gvt~edL~~ 74 (308)
T d1y8aa1 1 MFFTDWEGPWILTDFALELCMA-VFNNARFFSNL---SEY-DDYLAYEVRREGYEAGYTLK-LLTPFLAAAGVKNRDVER 74 (308)
T ss_dssp EEEECSBTTTBCCCHHHHHHHH-HHCCHHHHHHH---HHH-HHHHHHTTCCTTCCTTTHHH-HHHHHHHHTTCCHHHHHH
T ss_pred CceeccCCCCcccccHHHHHHh-cCCCcchhhhh---hhh-hhHHHHHhhccCCCCccchh-hHHHHHHHhCCCHHHHHH
Confidence 3689999999998877666543 33333333333 223 11222111 11111244 33333 56999999999
Q ss_pred HHHHHhchhhcCCCcHHHHHHHH---hCCCEEEEecCcHHHHHHHHHhhcCCc-EEEeceEEEeCcee------------
Q 042288 104 VARAVLPKFYSGDLHPETWRVFS---SCGRRCVLTANPRIMVEAFLKDFLGAD-MVIGTEICVYKGRS------------ 167 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~---~~G~~vivSaS~~~~v~~ia~~~lGid-~vigt~l~~~~G~~------------ 167 (515)
+.++-+. +-|.+-+.++ +.=-.+|||.|...|++.+|.. +|+. ++.+|++..++=-+
T Consensus 75 fSE~~~~------lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~-~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~ 147 (308)
T d1y8aa1 75 IAELSAK------FVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGVRGELHGTEVDFDSIAVPEGLREELLSII 147 (308)
T ss_dssp HHHHHCC------BCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCSEEEEEBCCGGGCCCCHHHHHHHHHHH
T ss_pred Hhhhcee------ecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhh-cCCCceeecccccccccCCChHHHHHHHHHh
Confidence 8886544 3366666555 3335789999999999999998 9984 68899887651100
Q ss_pred -----------------------eeEE-ecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccc
Q 042288 168 -----------------------TGFV-KSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 168 -----------------------tG~i-~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
.|++ ++-...-|.+|.+.++..+...+.....++|||.+|..||+.+..
T Consensus 148 ~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~ 220 (308)
T d1y8aa1 148 DVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARG 220 (308)
T ss_dssp HHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHH
T ss_pred hhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhc
Confidence 0111 111121335666666666654334456778999999999998744
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.45 E-value=6.8e-05 Score=66.31 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=65.5
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
++..++..| .++++|+-....++..++. ++++.++. ....|...++.++...+ ...
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~~~~--------------------~~~~K~~~l~~~~~~~~i~~~~ 98 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFL--------------------GKLEKETACFDLMKQAGVTAEQ 98 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEE--------------------SCSCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhh-hccccccc--------------------ccccHHHHHHHHHHHhcCCcce
Confidence 466777889 5677999988999999998 88875332 12246666555544322 234
Q ss_pred eEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
+.++||+.||+|||+.|+.++++.. .+.++..|.
T Consensus 99 v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~ 133 (177)
T d1k1ea_ 99 TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVD 133 (177)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSS
T ss_pred eEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCC
Confidence 6778999999999999999999864 666777775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.0009 Score=60.47 Aligned_cols=95 Identities=6% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
..+|++.+ .++++| ...|+|.++....+...+. +|+...........+.. . .+.-+.+.++..+.
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~-------~---~~KP~p~~~~~~~~ 195 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTK-------I---GHKVESESYRKIAD 195 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGG-------G---CCTTCHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccc-------c---ccCCCcHHHHHHHH
Confidence 34565555 566799 5677999999999999887 88643222111111100 0 11112233333332
Q ss_pred CCC--CCceEEEeCCcCcHHHHhcccccee-eC
Q 042288 192 DDE--EMPDIGLGDRKTDSLFLNLCKESYM-VP 221 (515)
Q Consensus 192 ~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vn 221 (515)
..+ ...++.+|||.+|+..-+.+|-..+ |+
T Consensus 196 ~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~ 228 (253)
T d1zs9a1 196 SIGCSTNNILFLTDVTREASAAEEADVHVAVVV 228 (253)
T ss_dssp HHTSCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred HhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence 211 2447889999999999999997544 44
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.29 E-value=9.8e-06 Score=69.13 Aligned_cols=40 Identities=10% Similarity=-0.013 Sum_probs=28.5
Q ss_pred cccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 179 GKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...|...+++..... ....+++||+.+|+.|.+.+|-+.+
T Consensus 103 ~~~k~~~l~~~~~~~-~~i~~~igD~~~dv~a~~~~Gi~~~ 142 (149)
T d1ltqa1 103 DVVKEEIFWKHIAPH-FDVKLAIDDRTQVVEMWRRIGVECW 142 (149)
T ss_dssp HHHHHHHHHHHTTTT-CEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred hHHHHHHHHHhccCC-CceEEEEcCCHHHHHHHHHCCCcEE
Confidence 345666676665431 2335678999999999999998864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.26 E-value=0.00011 Score=67.07 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=38.3
Q ss_pred ccccHHHHHHHHhc---CCCCCceEEEeCCcCcHHHHhccccceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLG---DDEEMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~---~~~~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A 230 (515)
.+..|...++.++. ......++|+|||.||++||+.|+++++| |++.++.+.|
T Consensus 176 ~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~~~~~~ 232 (243)
T d1wzca1 176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNV 232 (243)
T ss_dssp CSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTCEEE
T ss_pred hhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCChHHHhhh
Confidence 34456666555433 21123578999999999999999999999 6777776644
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.20 E-value=0.00059 Score=59.49 Aligned_cols=102 Identities=16% Similarity=0.106 Sum_probs=70.2
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeee------------------EEecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTG------------------FVKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG------------------~i~~~~~~~g 179 (515)
+++++.+++.| .++++||-...-+..++++ +|+. ...-++.+..++| .+-. .+ ..
T Consensus 26 ~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-r~-~p 99 (168)
T d1wpga2 26 MGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIF---GENEEVADRAYTGREFDDLPLAEQREACRRACCFA-RV-EP 99 (168)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSS---CTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEE-SC-CH
T ss_pred HHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCC---CCccccccccccccccchhhHHHHhhhhhhhhhhh-cc-ch
Confidence 45677889999 5677999999999999999 9973 1111111111221 1111 13 56
Q ss_pred ccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 180 KNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
++|..-++.+-.. .+...+.||+.||.|+|+.|+-+++++-...+.+
T Consensus 100 ~~K~~lv~~l~~~--g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~ 146 (168)
T d1wpga2 100 SHKSKIVEYLQSY--DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAK 146 (168)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHH
T ss_pred hHHHHHHHHHHhc--ccceeEEecCCCCHHHHHhCCEEEEeccccHHHH
Confidence 7888877776544 3556778999999999999999999985444443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=3.5e-05 Score=72.08 Aligned_cols=54 Identities=17% Similarity=0.348 Sum_probs=43.1
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.++...+. ..++++|||.||+|||+.|++++++ |..+++++.|.
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~ 243 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR 243 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 456788887777554322 3489999999999999999999999 67778888775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.94 E-value=0.00014 Score=65.26 Aligned_cols=92 Identities=14% Similarity=0.064 Sum_probs=50.9
Q ss_pred CcHHHHH---HHHhCCC-EEEEecC----cHHHHHHHHHhhcC----CcEEEeceEEEeCceeeeEEecCCccccccHHH
Q 042288 117 LHPETWR---VFSSCGR-RCVLTAN----PRIMVEAFLKDFLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 117 ~~~~~~~---~l~~~G~-~vivSaS----~~~~v~~ia~~~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~ 184 (515)
.+|++++ .++++|. .+++|.+ .+...+..... +| +|.+++++-. |. ..|+ . +--+
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~-------~~-~KP~---p-~~~~ 164 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQV-------GM-IKPE---P-QIYN 164 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHH-------SC-CTTC---H-HHHH
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhc-------cC-CCCC---h-HHHH
Confidence 5566555 6678994 5667753 44444444443 33 5777776421 00 0111 1 1111
Q ss_pred HHHHHhcCCCCCceEEEeCCcCcHHHHhcccc-ceeeCC
Q 042288 185 ALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKE-SYMVPP 222 (515)
Q Consensus 185 ~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~-~~~Vnp 222 (515)
...+.++-. ...++.+|||.+|+..-+.+|- .+.|+.
T Consensus 165 ~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~ 202 (222)
T d1cr6a1 165 FLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHN 202 (222)
T ss_dssp HHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCS
T ss_pred HHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECC
Confidence 222233331 3457889999999999999994 566654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.81 E-value=0.00012 Score=68.14 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=42.2
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
.|..|..+|+.+....+ ...++|+|||.||++||+.|+++++|. .++++++.|.
T Consensus 183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~ 239 (260)
T d2rbka1 183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD 239 (260)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 45678887777654322 235799999999999999999999985 6778888775
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.80 E-value=0.00015 Score=65.87 Aligned_cols=54 Identities=20% Similarity=0.144 Sum_probs=40.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.+....+. ..++++|||.||++||+.|+.+++| |.++.++..|.
T Consensus 148 ~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 148 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSD 204 (225)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCS
T ss_pred CccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCC
Confidence 355687777666544322 3478999999999999999999999 56777776654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=96.73 E-value=0.00015 Score=67.53 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=42.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|..+++.++...+ ...++++|||.||++||+.|++++++ |..+++++.|.
T Consensus 194 ~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~ 250 (271)
T d1rkqa_ 194 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN 250 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 45578888887765422 23479999999999999999999999 67778887775
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.67 E-value=0.00014 Score=67.98 Aligned_cols=54 Identities=17% Similarity=0.086 Sum_probs=43.0
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|..+++.++...+. ..++|+|||.||+|||+.++.++++ |.++++++.|.
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~ 243 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD 243 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCS
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 466799988877654322 3479999999999999999999999 56677887776
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0053 Score=54.03 Aligned_cols=27 Identities=11% Similarity=-0.123 Sum_probs=20.4
Q ss_pred CceEEEeCCcCcHHHHhcccc-ceeeCC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKE-SYMVPP 222 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~-~~~Vnp 222 (515)
..++.+||+..|+..-+.+|- .+.|+.
T Consensus 177 ~e~l~VgD~~~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 177 SEVVFLDDIGANLKPARDLGMVTILVQD 204 (225)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred cceeEEecCHHHHHHHHHcCCEEEEECC
Confidence 447889999999998887777 444653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=96.54 E-value=0.00046 Score=62.01 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=30.4
Q ss_pred cccHHHHHHHHhcCC--CCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 179 GKNKAGALMKMLGDD--EEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 179 g~~K~~~l~~~~~~~--~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
...++++|.+.+... ....++|+|||.||++||+.|+++++|.
T Consensus 185 K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 185 KDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp HHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEEe
Confidence 334455555543211 1244789999999999999999999994
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=96.52 E-value=0.00034 Score=65.16 Aligned_cols=54 Identities=19% Similarity=0.240 Sum_probs=41.1
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.+....+ ...++++|||.||++||+.+++++++ |.+++++++|.
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~ 260 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAK 260 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSS
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 45567777776655422 23589999999999999999999998 56677877765
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.38 E-value=0.00095 Score=59.67 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=35.5
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.|..|..+|+.++.. ...+++|||.||++||+.++++++|.
T Consensus 156 ~g~~Kg~al~~l~~~---~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 156 PGVNKGSAIRSVRGE---RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp TTCCHHHHHHHHHTT---SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CCCCHHHHHHHHhcc---ccceeecCCCChHHHHhccCCeEEEE
Confidence 677899999998764 56789999999999999998887774
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.96 E-value=0.06 Score=47.00 Aligned_cols=92 Identities=9% Similarity=0.044 Sum_probs=50.4
Q ss_pred CCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHh----------hcC----CcEEEeceEEEeCceeeeEEecCCcccccc
Q 042288 116 DLHPETWRVFSSCGRRCVLTANPRIMVEAFLKD----------FLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKN 181 (515)
Q Consensus 116 ~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~----------~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~ 181 (515)
..++.+.+.+...-...+.|++.......+... .+| +|.+++++.. + ..|+ .+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~-------~--~KP~----p~ 163 (225)
T d2g80a1 97 PVYADAIDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS-------G--KKTE----TQ 163 (225)
T ss_dssp CCCHHHHHHHHHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH-------C--CTTC----HH
T ss_pred cchhhHHHHHhhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc-------C--CCCC----hh
Confidence 456666666655446677888877666555432 023 2333333210 0 0111 11
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccce-eeC
Q 042288 182 KAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESY-MVP 221 (515)
Q Consensus 182 K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vn 221 (515)
--..+.+.++-. ...++.+|||.+|+.-=+.+|-.. .|+
T Consensus 164 ~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~ 203 (225)
T d2g80a1 164 SYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLAS 203 (225)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred HhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEe
Confidence 122334444432 345788999999999999999744 455
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.14 E-value=0.0066 Score=54.04 Aligned_cols=50 Identities=18% Similarity=0.036 Sum_probs=38.6
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCc----CcHHHHhccc-cceeeC-CCCCCCc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRK----TDSLFLNLCK-ESYMVP-PNPKVDP 228 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~----~DlpmL~~a~-~~~~Vn-p~~~l~~ 228 (515)
.|..|..+|+.+++. +...++|+|||. ||++||+.|+ ++++|+ |+..++.
T Consensus 182 ~~vsKg~al~~L~~~-~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~ 237 (244)
T d2fuea1 182 EGWDKRYCLDSLDQD-SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQR 237 (244)
T ss_dssp TTCSTTHHHHHHTTS-CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHH
T ss_pred hhccHHHHHHHHhcC-ChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHH
Confidence 566899999988764 345589999987 9999999998 799984 5444443
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=94.48 E-value=0.003 Score=62.20 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=28.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++++.++++| +++|+||.+...++.++++ +|+.
T Consensus 222 ~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~ 255 (380)
T d1qyia_ 222 VLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLL 255 (380)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCG
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCc
Confidence 4666788999 5678999999999999998 9974
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.51 E-value=0.041 Score=48.91 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=24.4
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++.++++| .++++||-+...+.++++. +|++
T Consensus 26 i~~l~~~G~~~~~aTGR~~~~~~~~~~~-~~~~ 57 (243)
T d1wzca1 26 IEELKDMGFEIIFNSSKTRAEQEYYRKE-LEVE 57 (243)
T ss_dssp HHHHHHTTEEEEEECSSCHHHHHHHHHH-HTCC
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHH-hccc
Confidence 44455678 5667899999999999998 8875
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.31 E-value=0.015 Score=51.60 Aligned_cols=51 Identities=18% Similarity=0.106 Sum_probs=36.2
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhccc-cceeeCCCCCCCcc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNLCK-ESYMVPPNPKVDPV 229 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~a~-~~~~Vnp~~~l~~~ 229 (515)
.|..|..+++.+++. +....+|+|| |-||++||+.++ ..++|+...+.+++
T Consensus 182 ~~vsKg~al~~l~~~-~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~ 237 (243)
T d2amya1 182 DGWDKRYCLRHVEND-GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRI 237 (243)
T ss_dssp TTCSGGGGGGGTTTS-CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHH
T ss_pred cccCHHHHHHHHhCC-CcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHH
Confidence 566788888887653 2455899999 569999999998 68888753333333
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.27 E-value=0.012 Score=52.38 Aligned_cols=18 Identities=39% Similarity=0.422 Sum_probs=15.7
Q ss_pred CCCeEEEEecCCccccCC
Q 042288 26 REKDTVVADVDGTLLRGR 43 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~d 43 (515)
+.++|++||+||||++.+
T Consensus 1 ~~~kl~~fDlDGTLl~~~ 18 (243)
T d2amya1 1 PGPALCLFDVDGTLTAPR 18 (243)
T ss_dssp CCSEEEEEESBTTTBCTT
T ss_pred CCCEEEEEcCcCCeeCCC
Confidence 368999999999999855
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.31 E-value=0.067 Score=47.03 Aligned_cols=15 Identities=47% Similarity=0.539 Sum_probs=12.4
Q ss_pred eEEEEecCCccccCC
Q 042288 29 DTVVADVDGTLLRGR 43 (515)
Q Consensus 29 ~lavFD~DgTL~~~d 43 (515)
.|++||+||||++.+
T Consensus 2 ~i~lFDlDGTLl~~~ 16 (244)
T d2fuea1 2 VLCLFDVDGTLTPAR 16 (244)
T ss_dssp EEEEEESBTTTBSTT
T ss_pred EEEEEccccCccCCC
Confidence 467799999999854
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=87.33 E-value=0.097 Score=47.43 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=22.5
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++.++++| .++++||.....+.++.+. ++++
T Consensus 30 l~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~ 61 (271)
T d1rkqa_ 30 IAAARARGVNVVLTTGRPYAGVHNYLKE-LHME 61 (271)
T ss_dssp HHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCC
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHH-hcCc
Confidence 33456678 4567899887888888887 8764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=85.54 E-value=0.18 Score=43.93 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=22.6
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++.++++| ..+++||-+...+.++.++ +|++
T Consensus 30 l~~l~~~Gi~~~i~TGR~~~~~~~~~~~-~~~~ 61 (232)
T d1xvia_ 30 LTRLREANVPVILCSSKTSAEMLYLQKT-LGLQ 61 (232)
T ss_dssp HHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCT
T ss_pred HHHHHHCCCEEEEEeCCChhhchhHHHH-hccC
Confidence 33455678 5677888888888888887 7764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=85.20 E-value=0.18 Score=45.62 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=14.3
Q ss_pred CCCCeEEEEecCCcccc
Q 042288 25 GREKDTVVADVDGTLLR 41 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~ 41 (515)
....++++||+||||+.
T Consensus 7 ~~~ikli~~DlDGTLl~ 23 (283)
T d2b30a1 7 GADIKLLLIDFDGTLFV 23 (283)
T ss_dssp TCCCCEEEEETBTTTBC
T ss_pred ccCccEEEEECCCCCcC
Confidence 34578999999999985
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=84.77 E-value=0.087 Score=46.56 Aligned_cols=29 Identities=24% Similarity=0.157 Sum_probs=20.5
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
.++++| .++++||-+...++++.+. +|++
T Consensus 31 ~l~~~g~~v~~~TGr~~~~~~~~~~~-~~~~ 60 (225)
T d1l6ra_ 31 SAEKKGLTVSLLSGNVIPVVYALKIF-LGIN 60 (225)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHH-HTCC
T ss_pred HHHHCCCEEEEEcCCchhhhHHHHHH-cCCC
Confidence 344567 4556888887788888886 7864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=84.11 E-value=0.17 Score=45.69 Aligned_cols=15 Identities=33% Similarity=0.514 Sum_probs=12.9
Q ss_pred eEEEEecCCccccCC
Q 042288 29 DTVVADVDGTLLRGR 43 (515)
Q Consensus 29 ~lavFD~DgTL~~~d 43 (515)
+++|||+||||++.+
T Consensus 2 k~if~DlDGTL~~~~ 16 (260)
T d2rbka1 2 KALFFDIDGTLVSFE 16 (260)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred eEEEEECCCCCcCCC
Confidence 689999999999743
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=84.08 E-value=0.12 Score=46.90 Aligned_cols=35 Identities=23% Similarity=0.163 Sum_probs=24.2
Q ss_pred HHHHHhcCCCCCceEEEeCC-cCcHHHHhcccc-ceee
Q 042288 185 ALMKMLGDDEEMPDIGLGDR-KTDSLFLNLCKE-SYMV 220 (515)
Q Consensus 185 ~l~~~~~~~~~~~~~aygDS-~~DlpmL~~a~~-~~~V 220 (515)
.+.+.++-. ...++.+||| .+|+.+-+.+|- +++|
T Consensus 193 ~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V 229 (261)
T d1vjra_ 193 VISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILV 229 (261)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred HHHhhhccC-chhcceecCChhHHHHHHHHCCCcEEEE
Confidence 333444431 3458999999 579999999996 5555
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=84.07 E-value=0.19 Score=44.76 Aligned_cols=16 Identities=19% Similarity=0.376 Sum_probs=13.3
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
+.+++||+||||++.+
T Consensus 3 ~~li~~DlDGTL~~~~ 18 (244)
T d1s2oa1 3 QLLLISDLDNTWVGDQ 18 (244)
T ss_dssp SEEEEECTBTTTBSCH
T ss_pred ceEEEEECcccCCCCC
Confidence 4688999999999853
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=83.30 E-value=0.19 Score=43.72 Aligned_cols=12 Identities=42% Similarity=0.639 Sum_probs=11.2
Q ss_pred EEEEecCCcccc
Q 042288 30 TVVADVDGTLLR 41 (515)
Q Consensus 30 lavFD~DgTL~~ 41 (515)
|++||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 789999999997
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=82.81 E-value=0.22 Score=44.98 Aligned_cols=59 Identities=5% Similarity=-0.044 Sum_probs=32.6
Q ss_pred CCCEEEEecCcHHHHHHHHHhhcCCc--EEEece---EEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 128 CGRRCVLTANPRIMVEAFLKDFLGAD--MVIGTE---ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 128 ~G~~vivSaS~~~~v~~ia~~~lGid--~vigt~---l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.|+.+++||-+...+.++.++ ++.. .+||.. +...++. .+... . ...+.+..+.+++.+
T Consensus 34 ~~~~~i~TGR~~~~~~~~~~~-~~~~~~~~I~~nGa~i~~~~~~---~i~~~-~-i~~~~~~~i~~~~~~ 97 (267)
T d1nf2a_ 34 KCYVVFASGRMLVSTLNVEKK-YFKRTFPTIAYNGAIVYLPEEG---VILNE-K-IPPEVAKDIIEYIKP 97 (267)
T ss_dssp TSEEEEECSSCHHHHHHHHHH-HSSSCCCEEEGGGTEEEETTTE---EEEEC-C-BCHHHHHHHHHHHGG
T ss_pred CCEEEEECCCChHHHHHHHHH-hcccCCceeccCCeEEEecccc---ccccc-C-CCHHHHHHHHHHHHh
Confidence 456677898887777777776 5543 245432 1111222 23332 2 355666777777665
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=82.75 E-value=0.21 Score=44.98 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=23.5
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
.++++| .++++||-+...+.++.++ ++.+ .+++
T Consensus 31 ~l~~~gi~~~i~TGR~~~~~~~~~~~-l~~~~~~i~ 65 (269)
T d1rlma_ 31 ELKKRGIKFVVASGNQYYQLISFFPE-LKDEISFVA 65 (269)
T ss_dssp HHHHHTCEEEEECSSCHHHHGGGCTT-TTTTSEEEE
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHH-hCcccceEe
Confidence 344568 5667899888888888887 8875 3443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.69 E-value=0.17 Score=45.59 Aligned_cols=25 Identities=24% Similarity=0.122 Sum_probs=20.2
Q ss_pred CceEEEeCCc-CcHHHHhcccc-ceee
Q 042288 196 MPDIGLGDRK-TDSLFLNLCKE-SYMV 220 (515)
Q Consensus 196 ~~~~aygDS~-~DlpmL~~a~~-~~~V 220 (515)
..++++|||. +|+.+-+.||- .++|
T Consensus 194 ~e~v~IGD~~~~DI~~a~~aG~~tilV 220 (250)
T d2c4na1 194 EETVIVGDNLRTDILAGFQAGLETILV 220 (250)
T ss_dssp GGEEEEESCTTTHHHHHHHTTCEEEEE
T ss_pred hheEEecCChHHHHHHHHHCCCCEEEE
Confidence 4479999995 69999999996 4555
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=80.33 E-value=0.36 Score=42.04 Aligned_cols=20 Identities=35% Similarity=0.496 Sum_probs=16.4
Q ss_pred CCCCeEEEEecCCccccCCC
Q 042288 25 GREKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds 44 (515)
....++|+||.||||+...+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~ 37 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRS 37 (195)
T ss_dssp CCCSCEEEECSBTTTEECSS
T ss_pred CCcCcEEEEECCCceEeeCC
Confidence 34679999999999998654
|