Citrus Sinensis ID: 042392

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430------
Protein Sequence
MGCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEcEEEcccccEEEEEEEEcccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccEEccccccccccccccccccccccccccHHHHHHEEEccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHHHcccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHccccccccHHHHHHccccccccccHHHHHHHHHHHcccccccEEcHHHHHHHHcHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHEEccHHcccccccEEEEEEcccccccEEHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEEccccccccEEEccccEEEEccccccccccHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEcHHHHHHHHHHccccccHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccEcHHHHHHHHHHcccccHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mgccvsksqrqrypilgkpyeDVMLHYSFGrmlgrgrfgVTYLctenstnmpyacksmakkpkmkyaENDMMIRREIQIRRLLsgqpnivelksahedeTAVHVVMELCQGGDLFDRIIAKgyyserdaAPVLRAIVNAVNVChsmgvmhrdlkpenfcfisrddnallKVTDFGSAllfeeeggeasddtSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEmdtdkngtlsyDELRAGLTKVGSMLTEFDVKQLMEAADmdgngaidytEFTAATIQRQKLERSEYLSKAFQyfdkdnsgydeFRAMvespqtirnvshiytdkakkfglgntkQFRAMNMLKKLVLQgdidgngnidFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFkennmgddaTIKEIISEVGRDHK
Flexible Loop (DISEMBL)
mgccvsksqrqrypilgkpYEDVMLHYSFGRMLGRGRFGVTYLCTEnstnmpyacksmakkpkMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLfeeeggeasddtsvILRMKQFrrmsklkkltvKVIVeylpgeetqalkEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVespqtirnvshiytdkakkfglgntKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETafkennmgddatIKEIISEVGRDHK
Low Complexity Region (SEG)
MGCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK
Disordered region (IsUnstruct)
***********RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK************NDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE********TSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK**********************
Disordered Region (DISOPRED)
*******************YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQ*******IYTDKAKKF***********NMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE*NMGDDATIKEIISEVGRD**
Disordered Region (DISEMBL)
********QRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK
Disordered Region (DISPRO)
*************PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	436	2.2.26 [Sep-21-2011]
Q38868	541	Calcium-dependent protein	yes	no	0.954	0.768	0.430	2e-77
P49101	513	Calcium-dependent protein	N/A	no	0.947	0.805	0.420	9e-76
Q9C6P3	521	Calcium-dependent protein	no	no	0.951	0.796	0.419	1e-75
P53683	533	Calcium-dependent protein	yes	no	0.908	0.742	0.394	2e-75
Q9ZSA2	531	Calcium-dependent protein	no	no	0.942	0.774	0.399	2e-72
O49717	554	Calcium-dependent protein	no	no	0.958	0.754	0.389	1e-71
Q1PFH8	551	Calcium-dependent protein	no	no	0.944	0.747	0.385	3e-71
P28582	532	Calcium-dependent protein	N/A	no	0.940	0.770	0.390	4e-71
Q42479	529	Calcium-dependent protein	no	no	0.951	0.784	0.360	1e-62
Q9M101	520	Calcium-dependent protein	no	no	0.956	0.801	0.389	2e-62

>sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1

 Score =  290 bits (742), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 197/458 (43%), Positives = 265/458 (57%), Gaps = 42/458 (9%)

Query: 7   KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY 66
           K+  +   IL   +EDV L Y+ G+ LGRG+FGVTYLCTENST   YACKS++KK  +  
Sbjct: 71  KTTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTK 130

Query: 67  AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE 126
           A+ D M RREIQI + LSGQPNIVE K A+EDE AV++VMELC GG+LFDRIIAKG+Y+E
Sbjct: 131 ADKDDM-RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTE 189

Query: 127 RDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-- 184
           R AA V R IVN V +CH MGV+HRDLKPENF   S+D+ AL+K TDFG ++  EE    
Sbjct: 190 RAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVY 249

Query: 185 ----GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEY--LPG-----EETQ-----ALKE 228
               G A      +LR    RR  K   +    I+ Y  L G      ET+     A+ E
Sbjct: 250 RDIVGSAYYVAPEVLR----RRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILE 305

Query: 229 KFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM-------DGNGAIDYTE 281
             I+ ++    ++S     +    V  MLT  D K+ + AAD+       +G  A D   
Sbjct: 306 GHIDFESQPWPSIS----SSAKDLVRRMLTA-DPKRRISAADVLQHPWLREGGEASD-KP 359

Query: 282 FTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAK 337
             +A + R K  R+   L K       +N   +E    +AM  +  T  + S   T +  
Sbjct: 360 IDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDT--DNSGTITYEEL 417

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLD 397
           K GL           +K+L+   D+DGNG+ID+IEF+      ++LE+ E L KAFQ+ D
Sbjct: 418 KEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFD 477

Query: 398 KNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           K+S  +IT++ELE+A KE  MGDDATIKE++S+V  D+
Sbjct: 478 KDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDN 515

May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1

 Score =  284 bits (727), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 187/445 (42%), Positives = 256/445 (57%), Gaps = 32/445 (7%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGK YEDV   YSFG+ LGRG+FGVTYLCTE ++   YACKS++K+  +  A+ +  IR
Sbjct: 53  ILGKQYEDVRSVYSFGKELGRGQFGVTYLCTEIASGRQYACKSISKRKLVSKADRED-IR 111

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE + A+ED++ VHVVMELC GG+LFDRIIAKG+Y+ER AA + R
Sbjct: 112 REIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATICR 171

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEA 187
           A+VN VN+CH MGVMHRDLKPENF   + ++NA+LK TDFG + +F EEG       G A
Sbjct: 172 AVVNVVNICHFMGVMHRDLKPENFLLATMEENAMLKATDFGLS-VFIEEGKMYRDIVGSA 230

Query: 188 SDDTSVILRMKQFRRMSKLKK-LTVKVIVEYLPGEETQALKEKF-----IEMDTDKNGTL 241
                 +LR    + +      + + +++  +P    +  K  F      E+D +     
Sbjct: 231 YYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPWP 290

Query: 242 SYDELRAGLTKVGSMLTEFDVKQLMEAADM------DGNGAIDYTEFTAATIQRQKLERS 295
           S  E    L +   MLT    K+L  A  +      +G  A D     +A + R K  R+
Sbjct: 291 SISESAKDLVR--KMLTRDPKKRLTSAQVLQHQWLREGGEASD-KPIDSAVLSRMKQFRA 347

Query: 296 -EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNV----SHIYTDKAKKFGLGNTKQFRAM 350
              L K        N   +E + +    Q   N+    S   T +  K GL       + 
Sbjct: 348 MNKLKKMALKVIASNLNEEEIKGL---KQMFMNMDTDNSGTITYEELKAGLAKLGSKLSE 404

Query: 351 NMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELE 410
             +K+L+   D+DGNG+ID++EF+      +KLE  E L KAFQY DK++  FIT +ELE
Sbjct: 405 AEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELE 464

Query: 411 TAFKENNMGDDATIKEIISEVGRDH 435
           +A  E+ MGD +TI+EIISEV  D+
Sbjct: 465 SALIEHEMGDTSTIREIISEVDTDN 489

May play a role in signal transduction pathways that involve calcium as a second messenger.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1

 Score =  284 bits (726), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 186/443 (41%), Positives = 258/443 (58%), Gaps = 28/443 (6%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           IL KPYEDV L Y+  + LGRG+FGVTYLCTE ST   +ACKS++KK  +   + + M R
Sbjct: 61  ILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDM-R 119

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+EDE AV++VMELC GG+LFDRI+AKG+YSER AA V R
Sbjct: 120 REIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCR 179

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEA 187
            IVN VN+CH MGVMHRDLKPENF   S+D+ AL+K TDFG ++ F EEG       G A
Sbjct: 180 QIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSV-FIEEGRVYKDIVGSA 238

Query: 188 SDDTSVILRMKQFRRMSKLKK-LTVKVIVEYLP---GEETQALKEKFIEMDTDKNGTLSY 243
                 +L+ +  + +      + + +++  +P    E  + + +  +E + D       
Sbjct: 239 YYVAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWP 298

Query: 244 DELRAGLTKVGSMLTEFDVKQLMEAADM-------DGNGAIDYTEFTAATIQRQKLERS- 295
               +    V  MLT+ D K+ + AA++       +G  A D     +A + R K  R+ 
Sbjct: 299 SISNSAKDLVRRMLTQ-DPKRRISAAEVLKHPWLREGGEASD-KPIDSAVLSRMKQFRAM 356

Query: 296 EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
             L K       +N   +E    +AM  +  T  + S   T +  K GL           
Sbjct: 357 NKLKKLALKVIAENIDTEEIQGLKAMFANIDT--DNSGTITYEELKEGLAKLGSRLTEAE 414

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           +K+L+   D+DGNG+ID+IEF+      ++LE+ E + KAFQ+ DK+   +IT +ELE A
Sbjct: 415 VKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAA 474

Query: 413 FKENNMGDDATIKEIISEVGRDH 435
            KE  MGDDATIKEI+S+V  D+
Sbjct: 475 LKEYGMGDDATIKEILSDVDADN 497

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2

 Score =  283 bits (723), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/461 (39%), Positives = 253/461 (54%), Gaps = 65/461 (14%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKPY+DV   YS G+ LGRG+FGVTYLCTE ++   YACKS++K+  +  A+ +  IR
Sbjct: 73  ILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKED-IR 131

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQ NIVE + A+ED++ VHVVMELC GG+LFDRIIAKG+YSER AA + R
Sbjct: 132 REIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAATICR 191

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEAS 188
           A+VN VN+CH MGVMHRDLKPENF   ++++NA+LK TDFG ++  EE        G A 
Sbjct: 192 AVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEGKMYRDIVGSAY 251

Query: 189 DDTSVILRMKQFRRMSKLKK-LTVKVIVEYLPGEETQALKEKF-----IEMDTDKNGTLS 242
                +LR    + +      + + +++  +P    +  K  F      E+D +     S
Sbjct: 252 YVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQPWPS 311

Query: 243 YDELRAGLTKVGSMLTEFDVKQLMEAADMDG----NGAIDYTEFTAATIQRQKLERS--- 295
             E    L +   MLT+   K++  A  +      +G        +A + R K  R+   
Sbjct: 312 ISESAKDLVR--KMLTQDPKKRITSAQVLQHPWLRDGEASDKPIDSAVLSRMKQFRAMNK 369

Query: 296 ------------------EYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTD 334
                             + L + F   D DNSG   Y+E +A                 
Sbjct: 370 LKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKA----------------- 412

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQ 394
                GL       +   +K+L+   D+DGNG+ID++EF+      +KLE  E L KAFQ
Sbjct: 413 -----GLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQ 467

Query: 395 YLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           Y DK++  FIT +ELE+A  E+ MGD +TIK+IISEV  D+
Sbjct: 468 YFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDN 508

May play a role in signal transduction pathways that involve calcium as a second messenger.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1

 Score =  273 bits (699), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/446 (39%), Positives = 259/446 (58%), Gaps = 35/446 (7%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKP+ED+   YS G+ LGRG+FG+TY+C E  T   YACKS+ K+ K+   ++   ++
Sbjct: 68  ILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKR-KLISKQDKEDVK 126

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE+K A+ED  ++H+VMELC GG+LFDRIIA+G+YSER AA ++R
Sbjct: 127 REIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIR 186

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT--S 192
           +IVN V +CH MGV+HRDLKPENF   S+++NA+LK TDFG ++  EE  G+   D   S
Sbjct: 187 SIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEE--GKVYRDIVGS 244

Query: 193 VILRMKQFRRMSKLKKLTVK-------VIVEYLP---GEETQALKEKFI--EMDTDKNGT 240
                 +  R S  K++ +        +++  +P    E  + + ++ I  E+D      
Sbjct: 245 AYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPW 304

Query: 241 LSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSK 300
            S  E    L +   MLT+ D K+ + AA +  +  I   E     I    L R     K
Sbjct: 305 PSISESAKDLVR--KMLTK-DPKRRITAAQVLEHPWIKGGEAPDKPIDSAVLSR----MK 357

Query: 301 AFQYFDKDNSGYDEFRAMVESPQTIRNV----SHIYTDKAK-------KFGLGNTKQFRA 349
            F+  +K      +  A   S + I+ +    ++I TDK+        K GL       +
Sbjct: 358 QFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLS 417

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
              +K+L+   D+DGNG ID+ EF++     YKL+  E + KAFQ+ DK++   IT +EL
Sbjct: 418 ETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDEL 477

Query: 410 ETAFKENNMGDDATIKEIISEVGRDH 435
           E+A KE  MGD+A+IKE+ISEV  D+
Sbjct: 478 ESAMKEYGMGDEASIKEVISEVDTDN 503

May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1

 Score =  270 bits (691), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 175/449 (38%), Positives = 252/449 (56%), Gaps = 31/449 (6%)

Query: 10  RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           R+   ILGKP+E++   Y+ G+ LGRG+FG+TY C ENST   YACKS+ K+ K+   ++
Sbjct: 85  RETETILGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKR-KLTRKQD 143

Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
              ++REIQI + LSGQ NIVE+K A+ED  ++H+VMELC G +LFDRIIA+G+YSE+ A
Sbjct: 144 IDDVKREIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAA 203

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG----- 184
           A V+R+++N V +CH MGV+HRDLKPENF   S D+NA+LK TDFG ++  EE       
Sbjct: 204 AGVIRSVLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDI 263

Query: 185 -GEASDDTSVILRMKQFRRMSKLKKLTVKVI----VEYLPGEETQALKEKFI--EMDTDK 237
            G A      +LR    + +       +  I    V     E  + +  + I  E+D D 
Sbjct: 264 VGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDS 323

Query: 238 NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEY 297
               S  E    L +   +LT+ D KQ + AA    +  I   E     I    L R   
Sbjct: 324 QPWPSISESAKDLVR--KLLTK-DPKQRISAAQALEHPWIRGGEAPDKPIDSAVLSR--- 377

Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY----TDKAK-------KFGLGNTKQ 346
             K F+  +K      +  A   S + I+ +  ++    TDK+        K GL     
Sbjct: 378 -MKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGS 436

Query: 347 FRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITV 406
                 +K+L+   D+DGNG ID+IEF++     Y+ +  E + KAFQY DK++  FIT+
Sbjct: 437 KLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITM 496

Query: 407 NELETAFKENNMGDDATIKEIISEVGRDH 435
           +ELE+A KE  MGD+A+IKE+I+EV  D+
Sbjct: 497 DELESAMKEYGMGDEASIKEVIAEVDTDN 525

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1PFH8|CDPKJ_ARATH Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1

 Score =  269 bits (688), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 176/457 (38%), Positives = 259/457 (56%), Gaps = 45/457 (9%)

Query: 10  RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           +Q  PILG+P+ED+   YS GR LGRG+FG+TY+CTE S+   +ACKS+ K+ K+   ++
Sbjct: 81  QQPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKR-KLIRTKD 139

Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
              +RREIQI   LSGQPNIVE+K A+ED  +VH+VMELC+GG+LFD+I  +G+YSE+ A
Sbjct: 140 REDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAA 199

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSALLFEEEGGEAS 188
           A ++R++V  V +CH MGV+HRDLKPENF   S+D+ +++LK TDFG ++  EE  G+  
Sbjct: 200 AEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEE--GKVY 257

Query: 189 DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG---------------EETQALKEKFI-- 231
           +D   I+    +     LK+   K I  +  G               E  + + E+ +  
Sbjct: 258 ED---IVGSAYYVAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRG 314

Query: 232 EMDTDKNGTLSYDELRAGLTKVGSML-----TEFDVKQLMEAADMDGNGAIDYTEFTAAT 286
           E+D +     S  E    L  V +ML       F   Q++E   +   G        +A 
Sbjct: 315 EIDFESEPWPSISESAKDL--VRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAV 372

Query: 287 IQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAK-------K 338
           + R K  R+   L K    F   N   +E + +    +T+   +++ TDK+        K
Sbjct: 373 LSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGL----KTM--FANMDTDKSGTITYDELK 426

Query: 339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDK 398
            GL           +K+L+   D+DGNG ID+IEF++   + +++E  + L KAFQ+ DK
Sbjct: 427 SGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDK 486

Query: 399 NSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           ++  FI+  ELETA KE NMGDD  IKEIISEV  D+
Sbjct: 487 DNSGFISRQELETAMKEYNMGDDIMIKEIISEVDADN 523

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2

 Score =  269 bits (687), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 174/446 (39%), Positives = 251/446 (56%), Gaps = 36/446 (8%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKP+ED+   Y+ G+ LGRG+FG  Y CTENS+   YACKS+ K+ K+    +   I+
Sbjct: 69  ILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKR-KLVSKNDKEDIK 127

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K   ED  +VH+VMELC GG+LFDRIIA+G+YSER AA + R
Sbjct: 128 REIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSERAAATICR 187

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEAS 188
            IVN V+VCH MGVMHRDLKPENF   S+D +A+LK TDFG ++  EE        G A 
Sbjct: 188 QIVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVFIEEGKVYRNIVGSAY 247

Query: 189 DDTSVILRMKQFRRMSKLKK-LTVKVIVEYLPGEETQ-------ALKEKFIEMDTDKNGT 240
                +LR    + +      + + +++  +P    +       A+ E  I+ +++   +
Sbjct: 248 YVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDFESEPWPS 307

Query: 241 LSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSK 300
           +S     +    V  MLT+   +++  A  +D     +  E +   I    L R     K
Sbjct: 308 VS----NSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEASDKPIDSAVLSR----MK 359

Query: 301 AFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY----TDKAK-------KFGLGNTKQFRA 349
            F+  +K      +  A   S + I+ +  ++    TDK+        K GL       +
Sbjct: 360 QFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLS 419

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
              +++L+   D+DGNG ID++EF+      +KLE+ E   +AFQY DK++  FIT +EL
Sbjct: 420 EVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYE--HQAFQYFDKDNSGFITKDEL 477

Query: 410 ETAFKENNMGDDATIKEIISEVGRDH 435
           E+A KE  MGD+ATIK+IISEV  D+
Sbjct: 478 ESAMKEYGMGDEATIKDIISEVDSDN 503

May play a role in signal transduction pathways that involve calcium as a second messenger.

Daucus carota (taxid: 4039)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q42479|CDPK3_ARATH Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/441 (36%), Positives = 247/441 (56%), Gaps = 26/441 (5%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILG+P E+V   Y FGR LGRG+FGVTYL T   T    ACKS+  + ++ + ++   +R
Sbjct: 66  ILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTR-RLVHKDDIEDVR 124

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           RE+QI   LSG  NIV+LK A+ED  +V+++MELC+GG+LFDRII+KG YSER AA + R
Sbjct: 125 REVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCR 184

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL------FEEEGGEAS 188
            +V  V+ CHSMGVMHRDLKPENF F+S+D+N+ LK TDFG ++       F++  G A 
Sbjct: 185 QMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSAY 244

Query: 189 DDTSVILRMKQFRRMSKLKKLTV--KVIVEYLP---GEETQALKEKFIEMDTDKNGTLSY 243
                +L+ + +   + +    V   +++  +P   GE    + +  ++   D +    +
Sbjct: 245 YVAPEVLK-RNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSAD-PW 302

Query: 244 DELRAGLTKVGSMLTEFDVKQLMEAAD------MDGNGAIDYTEFTAATIQRQKLERS-E 296
             L  G   +   + ++D K  + AA+      +  +G         A + R K  R+  
Sbjct: 303 PALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMN 362

Query: 297 YLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
            L K       +N   +E    + M +S  T  N   I T +  + GL       +   +
Sbjct: 363 KLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNN--GIVTLEELRTGLPKLGSKISEAEI 420

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           ++L+   D+DG+G+ID++EF++    + ++E  + L  AFQ+ D ++  +IT+ ELE A 
Sbjct: 421 RQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAM 480

Query: 414 KENNMGDDATIKEIISEVGRD 434
           K+ NMGDD +IKEII+EV  D
Sbjct: 481 KKYNMGDDKSIKEIIAEVDTD 501

May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M101|CDPKN_ARATH Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=1 SV=1

 Score =  239 bits (611), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/452 (38%), Positives = 250/452 (55%), Gaps = 35/452 (7%)

Query: 8   SQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
           S R    ILGKP+ED+   YS GR LGRG  G+TY+C E  T   YACKS+ K+ K+   
Sbjct: 50  SVRDPETILGKPFEDIRKFYSLGRELGRGGLGITYMCKEIGTGNIYACKSILKR-KLISE 108

Query: 68  ENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER 127
                ++ EIQI + LSGQPN+VE+K ++ED  +VH+VMELC GG+LFDRIIA+G+YSER
Sbjct: 109 LGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSER 168

Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
            AA  +++IV+ V +CH  GV+HRDLKPENF F S+++NA+LKVTDFG +   EE  G+ 
Sbjct: 169 AAAGTIKSIVDVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVTDFGLSAFIEE--GKI 226

Query: 188 SDDT--SVILRMKQFRRMSKLKKLTVK-------VIVEYLPGEETQALKEKFIE-----M 233
             D   S      +  R S  K++ +        +++  +P       +  F+E     +
Sbjct: 227 YKDVVGSPYYVAPEVLRQSYGKEIDIWSAGVILYILLCGVPPFWADNEEGVFVEILKCKI 286

Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE 293
           D  +    S  +    L  V  MLTE D K+ + AA +  +  I   E     I    L 
Sbjct: 287 DFVREPWPSISDSAKDL--VEKMLTE-DPKRRITAAQVLEHPWIKGGEAPEKPIDSTVLS 343

Query: 294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR-----------NVSHIYTDKAKKFGLG 342
           R     K F+  +K      +  A+  S + I+           N S   T +  + GL 
Sbjct: 344 R----MKQFRAMNKLKKLALKVSAVSLSEEEIKGLKTLFANMDTNRSGTITYEQLQTGLS 399

Query: 343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 402
             +   +   +++LV   D+DGNG ID+ EF++     YKL   E + KAFQ+LDK+ + 
Sbjct: 400 RLRSRLSETEVQQLVEASDVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQHLDKDKNG 459

Query: 403 FITVNELETAFKENNMGDDATIKEIISEVGRD 434
            IT +ELE+A KE  MGD+A+IKE+ISEV  D
Sbjct: 460 HITRDELESAMKEYGMGDEASIKEVISEVDTD 491

May play a role in signal transduction pathways that involve calcium as a second messenger. Could act as a calcium sensor involved in drought- and salt stress-induced calcium signaling cascades. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	436
413952160	464	putative calcium-dependent protein kinas	0.784	0.737	0.429	4e-80
225460973	536	PREDICTED: calcium-dependent protein kin	0.949	0.772	0.427	2e-78
255583607	533	calcium-dependent protein kinase, putati	0.912	0.746	0.408	3e-78
356569794	551	PREDICTED: calcium-dependent protein kin	0.917	0.725	0.440	1e-76
13561063	542	protein kinase [Medicago sativa]	0.940	0.756	0.441	2e-76
3283996	540	calcium-dependent protein kinase [Nicoti	0.908	0.733	0.407	2e-76
297830722	541	calmodulin-domain protein kinase 9 [Arab	0.954	0.768	0.432	3e-76
350539856	553	calcium-dependent protein kinase [Solanu	0.908	0.716	0.407	3e-76
326206152	554	calcium-dependent protein kinase 3 [Sola	0.908	0.714	0.409	4e-76
351727903	538	calmodulin-like domain protein kinase is	0.933	0.756	0.429	4e-76

>gi|413952160|gb|AFW84809.1| putative calcium-dependent protein kinase family protein [Zea mays]

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 179/417 (42%), Positives = 246/417 (58%), Gaps = 75/417 (17%)

Query: 14  PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI 73
           P+LG+P EDV   Y+ G+ LGRG+FGVT LCT  +T   +ACK++AK+ K+   E+   +
Sbjct: 53  PVLGRPMEDVRSIYTVGKELGRGQFGVTSLCTHKATGERFACKTIAKR-KLSTKEDVEDV 111

Query: 74  RREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL 133
           RRE+QI   L+GQPNIVELK A+ED+ +VH+VMELC GG+LFDRIIAKG Y+ER AA +L
Sbjct: 112 RREVQIMYHLAGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGKYTERAAASLL 171

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE----------- 182
           R IV  V+ CHS+GV+HRDLKPENF  +++D+ A LK TDFG ++ F++           
Sbjct: 172 RTIVEIVHTCHSLGVIHRDLKPENFLLLNKDEKAPLKATDFGLSVFFKQGEVFKDIVGSA 231

Query: 183 ----------EGGEASDDTSV-----IL----------RMKQFRRMSKLKKLTV------ 211
                       G  +D  S+     IL          ++KQF  M++ KK  +      
Sbjct: 232 YYIAPEVLKRNYGPEADIWSIGVIVYILLCGVPPFWAGKLKQFTAMNQFKKAALRATHHY 291

Query: 212 ----------KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 261
                     KVI   L  EE + LKE F  MD+D +GT++ DELR GL K G+ L+E +
Sbjct: 292 SEIRITESPAKVIAGCLSEEEIRGLKEMFKGMDSDNSGTITVDELRRGLAKQGTKLSEAE 351

Query: 262 VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVES 321
           V+QLM AAD DGNG IDY EF  AT+   +++R E+L  AFQYFDKD SG          
Sbjct: 352 VEQLMAAADADGNGTIDYEEFITATMHMNRMDREEHLYTAFQYFDKDGSGC--------- 402

Query: 322 PQTIRNVSHIYTDKA-KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                 +S    ++A K+ GL + +       +K ++ + D D +G ID+ EFV +M
Sbjct: 403 ------ISKEELEQALKEKGLLDGRD------IKDIISEVDADNDGRIDYSEFVAMM 447

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460973|ref|XP_002278179.1| PREDICTED: calcium-dependent protein kinase 9-like [Vitis vinifera]

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 261/444 (58%), Gaps = 30/444 (6%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGK +EDV LHY+ G+ LGRG+FGVTYLCTENST + YACKS++K+ K+    +   IR
Sbjct: 76  ILGKSFEDVKLHYTIGKELGRGQFGVTYLCTENSTGLQYACKSISKR-KLVTKNDKEDIR 134

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VH+VMELC GG+LFDRIIAKG+YSER AA + R
Sbjct: 135 REIQIMQDLSGQPNIVEFKGAYEDRLSVHLVMELCAGGELFDRIIAKGHYSERAAASICR 194

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEAS 188
           AIVN V++CH MGVMHRDLKPENF   S+ +NALLK TDFG ++  EE        G A 
Sbjct: 195 AIVNVVHICHFMGVMHRDLKPENFLLSSKGENALLKATDFGLSVFIEEGKVYRDIVGSAY 254

Query: 189 DDTSVILRMKQFRRMSKLKK-LTVKVIVEYLP--GEETQ-----ALKEKFIEMDTDKNGT 240
                +LR +  + +      + + +++  +P    ET+     A+ +  I+ +T    +
Sbjct: 255 YVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGHIDFETSPWPS 314

Query: 241 LSYDELRAGLTKVGSMLTEFDVK-----QLMEAADMDGNGAIDYTEFTAATIQRQKLERS 295
           +S     +    V  MLT+   K     Q++E   +  +G        +A + R K  R+
Sbjct: 315 IS----SSAKDLVRKMLTQDPQKRITSAQVLEHPWIKEDGEASDKPIDSAVLSRMKQFRA 370

Query: 296 -EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
              L K       +N   +E    +AM  +  T ++ +  Y +   K GL          
Sbjct: 371 MNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYEEL--KSGLARLGSKLTEA 428

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
            +++L+   D+DGNG ID+IEF+    + +KLE  E L KAFQY DK+S  FIT +EL+ 
Sbjct: 429 EVQQLMEAADVDGNGTIDYIEFITATVNRHKLERDEHLFKAFQYFDKDSSGFITRDELKA 488

Query: 412 AFKENNMGDDATIKEIISEVGRDH 435
           A KE+ MGDD TI EIISEV  D+
Sbjct: 489 AMKEHGMGDDDTIAEIISEVDTDN 512

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583607|ref|XP_002532559.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223527714|gb|EEF29820.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 188/460 (40%), Positives = 251/460 (54%), Gaps = 62/460 (13%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           IL KPYEDV LHY+ G+ LGRG+FGVTYLCTE ST   YACKS++K+  +   + + M +
Sbjct: 73  ILEKPYEDVKLHYTIGKELGRGQFGVTYLCTEISTGKLYACKSISKRKLVTRNDKEDM-K 131

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED+ +VH+VMELC GG+LFDRIIAKG+YSE++AA + R
Sbjct: 132 REIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSEKEAASICR 191

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEAS 188
           +IVN V+ CH MGVMHRDLKPENF   S+D NALLK TDFG ++  EE        G A 
Sbjct: 192 SIVNVVHACHFMGVMHRDLKPENFLLSSKDQNALLKATDFGLSVFIEEGKTYRDIVGSAY 251

Query: 189 DDTSVILRMKQFRRMSKLKK-LTVKVIVEYLP---GEETQALKEKFIEMDTDKNGTLSYD 244
                +LR +  + M      + + +++  +P    E  + + +  ++ D D        
Sbjct: 252 YVAPEVLRRRYGKEMDIWSAGVMLYILLSGVPPFWAESEKGIFDAILQGDIDFESPPWPT 311

Query: 245 ELRAGLTKVGSMLTEFDVK-----QLMEAADMDGNGAIDYTEFTAATIQRQKLERS---- 295
              +    V  MLT+   K     Q++E   +   G        +A + R K  R+    
Sbjct: 312 ISSSAKDLVRRMLTQDPKKRITSTQVLEHPWLKEGGDASDKPIDSAVLSRMKQFRAMNKL 371

Query: 296 -----------------EYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDK 335
                            + L   F   D DNSG   YDE +A                  
Sbjct: 372 KKMALKVIAENLSSDEIQGLKSMFANIDTDNSGTITYDELKA------------------ 413

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQY 395
               GL           +K+L+   D+DGNG ID++EF+      ++LE  E L KAFQY
Sbjct: 414 ----GLARLGSKLTETEVKQLMDAADVDGNGTIDYLEFITATMHRHRLEREEHLYKAFQY 469

Query: 396 LDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
            DK++  FIT +ELETA K+  MGDDATIKEIISEV  D+
Sbjct: 470 FDKDNSGFITRDELETAMKDYEMGDDATIKEIISEVDADN 509

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569794|ref|XP_003553081.1| PREDICTED: calcium-dependent protein kinase 9-like [Glycine max]

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 198/449 (44%), Positives = 263/449 (58%), Gaps = 49/449 (10%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGK +EDV   Y+ G+ LGRG+FGVTYLCTENST + YACKS++K+  +K ++ +  I+
Sbjct: 85  ILGKQFEDVKQFYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVKKSDKED-IK 143

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VHVVMELC GG+LFDRIIAKG+YSER AA + R
Sbjct: 144 REIQIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSERAAASICR 203

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEA 187
            IVN V++CH MGVMHRDLKPENF   SRD++ALLK TDFG ++ F EEG       G A
Sbjct: 204 QIVNVVHICHFMGVMHRDLKPENFLLSSRDESALLKATDFGLSV-FIEEGKLYRDIVGSA 262

Query: 188 SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL------P-GEETQ-----ALKEKFIEMDT 235
                 +LR    RR  K   +    ++ Y+      P   ET+     A+ E  I+ ++
Sbjct: 263 YYVAPEVLR----RRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFES 318

Query: 236 DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM------DGNGA---IDYTEFTAAT 286
                +S +        V  ML +   K++  A  +      DGN +   ID     +A 
Sbjct: 319 QPWPNISNN----AKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNASDRPID-----SAV 369

Query: 287 IQRQKLERS-EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAKKFGLG 342
           + R K  R+   L K       +N   +E    +AM  +  T ++ +  Y +   K GL 
Sbjct: 370 LSRMKQFRAMNKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGAITYEEL--KAGLH 427

Query: 343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 402
                     +K+L+   D+DGNG+ID+IEF+      +KLE  + L KAFQY DK++  
Sbjct: 428 RLGSKLTEAEVKQLMEAADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDNSG 487

Query: 403 FITVNELETAFKENNMGDDATIKEIISEV 431
           FIT +ELETA KE  MGDDATIKEIISEV
Sbjct: 488 FITRDELETAMKEYGMGDDATIKEIISEV 516

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13561063|emb|CAA65500.1| protein kinase [Medicago sativa]

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 194/439 (44%), Positives = 257/439 (58%), Gaps = 29/439 (6%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGK  EDV   Y+ G+ LGRG+FGVT+LCTENST + YACKS++K+ K+    +   I+
Sbjct: 76  ILGKGLEDVKQFYTLGKELGRGQFGVTFLCTENSTGLLYACKSISKR-KLVSKSDREDIK 134

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VHVVMELC GG+LFDRIIAKG+YSE+ AA + R
Sbjct: 135 REIQIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSEKAAASICR 194

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEA 187
            IVN VN+CH MGVMHRDLKPENF   S+D+NALLK TDFG + +F EEG       G A
Sbjct: 195 QIVNVVNICHFMGVMHRDLKPENFLLASKDENALLKATDFGLS-VFIEEGRVYRDIVGSA 253

Query: 188 SDDTSVILRMKQFRRMSKLKK-LTVKVIVEYLP--GEETQ-----ALKEKFIEMDTDKNG 239
                 +LR +  + +      + + +++  +P    ET+     A+ E  I+ +++   
Sbjct: 254 YYVAPEVLRPRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESEPWP 313

Query: 240 TLS---YDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS- 295
            +S    D +R  L  +          Q++E   + G  A D     +A + R K  R+ 
Sbjct: 314 KISDSAKDLVRKML--IQEPKKRITAAQVLEHPWIKGGNASD-KPIDSAVLSRMKQFRAM 370

Query: 296 EYLSKAFQYFDKDNSGYDEFR---AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
             L K       +N   +E R   AM  +  T  + S   T +  K GL       +   
Sbjct: 371 NKLKKLALKVIAENMSEEEIRGLKAMFTNMDT--DNSGTITYEELKAGLQRLGSKLSEAE 428

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           +K+L+   D+DGNG ID IEF+      +KLE  + L KAFQY DK+S  FIT +ELETA
Sbjct: 429 VKQLMEAADVDGNGTIDCIEFITATMHRHKLERDDHLYKAFQYFDKDSSGFITRDELETA 488

Query: 413 FKENNMGDDATIKEIISEV 431
            KE  MGDDATIKEIISEV
Sbjct: 489 MKEYGMGDDATIKEIISEV 507

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3283996|gb|AAC25423.1| calcium-dependent protein kinase [Nicotiana tabacum]

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 188/461 (40%), Positives = 255/461 (55%), Gaps = 65/461 (14%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKP+ED+   Y+ G+ LGRG+FGVTY CTENST  PYACKS+ K+  ++  + + M +
Sbjct: 81  ILGKPFEDIRKQYTLGKELGRGQFGVTYHCTENSTGNPYACKSILKRKLVRKNDREDM-K 139

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VH+VMELC GG+LFDRIIA+GYYSE+DAA ++R
Sbjct: 140 REIQIMQHLSGQPNIVEFKGAYEDRHSVHLVMELCAGGELFDRIIARGYYSEKDAAEIIR 199

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT--S 192
            I N VN+CH MGVMHRDLKPENF   S+D+NA LK TDFG ++  EE  G+   D   S
Sbjct: 200 QIANVVNICHFMGVMHRDLKPENFLLTSKDENAKLKATDFGLSVFIEE--GKVYRDIVGS 257

Query: 193 VILRMKQFRRMSKLKKLTVK-------VIVEYLPGEETQALKEKF-------IEMDTDKN 238
                 +  R S  K+  V        +++  +P    +  K  F       I+  +D  
Sbjct: 258 AYYVAPEVLRRSYGKEADVWSAGVILYILLSGVPPFWAETEKGIFNAILKGEIDFQSDPW 317

Query: 239 GTLS---YDELRAGLTK------VGSMLTEFDVKQLMEAAD----------MDGNGAIDY 279
            ++S    D +R  LT+        + + E    ++ EA+D          M    A++ 
Sbjct: 318 PSISNSAKDLIRKMLTQEPRKRMTSAQVLEHPWLRMGEASDKPIDSAVLSRMKQFRAMNK 377

Query: 280 TEFTAATIQRQKLERSEY--LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTD 334
            +  A  +  + L   E   L   F   D DNSG   Y+E ++                 
Sbjct: 378 LKKLALKVIAENLSEEEIKGLKAMFANIDTDNSGTITYEELKS----------------- 420

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQ 394
                GL           +K+L+   D+DGNG ID+IEF+      ++LE  E L KAFQ
Sbjct: 421 -----GLARLGSKLTETEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLFKAFQ 475

Query: 395 YLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           Y DK+   FIT +ELE+A KE  MGD+ATIKEII+EV  D+
Sbjct: 476 YFDKDHSGFITRDELESAMKEYGMGDEATIKEIIAEVDTDN 516

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830722|ref|XP_002883243.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata] gi|297329083|gb|EFH59502.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata]

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 265/458 (57%), Gaps = 42/458 (9%)

Query: 7   KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY 66
           K+  +   IL   +EDV L Y+ G+ LGRG+FGVTYLCTENST   YACKS++KK  +  
Sbjct: 71  KTTSKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTK 130

Query: 67  AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE 126
           A+ D M RREIQI + LSGQPNIVE K A+EDE AV++VMELC GG+LFDRIIAKG+YSE
Sbjct: 131 ADKDDM-RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYSE 189

Query: 127 RDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-- 184
           R AA V R IVN V +CH MGV+HRDLKPENF   S+D+ AL+K TDFG ++  EE    
Sbjct: 190 RAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVY 249

Query: 185 ----GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEY--LPG-----EETQ-----ALKE 228
               G A      +LR    RR  K   +    I+ Y  L G      ET+     A+ E
Sbjct: 250 RDIVGSAYYVAPEVLR----RRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILE 305

Query: 229 KFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM-------DGNGAIDYTE 281
             I+ ++    ++S     +    V  MLT  D K+ + AAD+       +G  A D   
Sbjct: 306 GHIDFESQPWPSIS----NSAKDLVRRMLTA-DPKRRISAADVLQHPWLREGGEASD-KP 359

Query: 282 FTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAK 337
             +A + R K  R+   L K       +N   +E    +AM  +  T  + S  Y +   
Sbjct: 360 IDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGSITYEEL-- 417

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLD 397
           K GL           +K+L+   D+DGNG+ID+IEF+      ++LE+ E L KAFQ+ D
Sbjct: 418 KEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFD 477

Query: 398 KNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           K+S  +IT++ELE+A KE  MGDDATIKE++S+V  D+
Sbjct: 478 KDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDN 515

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539856|ref|NP_001234806.1| calcium-dependent protein kinase [Solanum lycopersicum] gi|19171502|emb|CAC87494.1| calcium-dependent protein kinase [Solanum lycopersicum]

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 188/461 (40%), Positives = 256/461 (55%), Gaps = 65/461 (14%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKP+E++   Y+ G+ LGRG+FGVTY CTENST  PYACKS+ K+  +   + + M +
Sbjct: 93  ILGKPFEEIRKLYTLGKELGRGQFGVTYYCTENSTGNPYACKSILKRKLVSKNDREDM-K 151

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VH+VMELC GG+LFDRIIA+GYYSE+DAA ++R
Sbjct: 152 REIQIMQHLSGQPNIVEFKGAYEDRQSVHLVMELCAGGELFDRIIARGYYSEKDAAEIIR 211

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT--S 192
            IVN VN+CH MGVMHRDLKPENF   S+D+NA+LK TDFG ++  EE  G+   D   S
Sbjct: 212 QIVNVVNICHFMGVMHRDLKPENFLLTSKDENAMLKATDFGLSVFIEE--GKVYRDIVGS 269

Query: 193 VILRMKQFRRMSKLKKLTVK-------VIVEYLPGEETQALKEKF-------IEMDTDKN 238
                 +  R S  K+  V        +++  +P    +  K  F       I+  +D  
Sbjct: 270 AYYVAPEVLRRSYGKEADVWSAGVILYILLSGVPPFWAETEKGIFNTILKGEIDFQSDPW 329

Query: 239 GTLS---YDELRAGLTK------VGSMLTEFDVKQLMEAAD----------MDGNGAIDY 279
            ++S    D +R  LT+        + + E    +L EA+D          M    A++ 
Sbjct: 330 PSISNSAKDLIRKMLTQEPRKRITSAQVLEHPWLRLGEASDKPIDSAVLSRMKQFRAMNK 389

Query: 280 TEFTAATIQRQKLERSEY--LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTD 334
            +  A  +  + L   E   L   F   D DNSG   Y+E ++                 
Sbjct: 390 LKKLALKVIAENLSEEEIKGLKAMFHNIDTDNSGTITYEELKS----------------- 432

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQ 394
                GL           +K+L+   D+DGNG+ID+IEF+      ++LE  E L KAFQ
Sbjct: 433 -----GLARLGSKLTETEVKQLMEAADVDGNGSIDYIEFITATMHRHRLERDEHLFKAFQ 487

Query: 395 YLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           + DK+   FIT +ELE A KE  MGD+ATIKEII+EV  D+
Sbjct: 488 HFDKDHSGFITRDELENAMKEYGMGDEATIKEIIAEVDTDN 528

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326206152|gb|ADZ52811.1| calcium-dependent protein kinase 3 [Solanum tuberosum]

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 187/457 (40%), Positives = 255/457 (55%), Gaps = 61/457 (13%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGKP+ED+   Y+ G+ LGRG+FGVTY CTENST  PYACKS+ K+  +   + + M +
Sbjct: 98  ILGKPFEDIRKLYTLGKELGRGQFGVTYYCTENSTGNPYACKSILKRKLVSKNDREDM-K 156

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED  +VH+VMELC GG+LFDRIIA+GYYSE++AA ++R
Sbjct: 157 REIQIMQHLSGQPNIVEFKGAYEDRQSVHLVMELCAGGELFDRIIARGYYSEKNAAEIIR 216

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT--S 192
            IVN VN+CH MGVMHRDLKPENF   S+D+NA+LK TDFG ++  EE  G+   D   S
Sbjct: 217 QIVNVVNICHFMGVMHRDLKPENFLLTSKDENAMLKATDFGLSVFIEE--GKVYRDIVGS 274

Query: 193 VILRMKQFRRMSKLKKLTVK-------VIVEYLPGEETQALKEKF-------IEMDTDKN 238
                 +  R S  K+  V        +++  +P    +  K  F       I+  +D  
Sbjct: 275 AYYVAPEVLRRSYGKEADVWSAGVILYILLSGVPPFWAETEKGIFNTILKGEIDFQSDPW 334

Query: 239 GTLS---YDELRAGLTK------VGSMLTEFDVKQLMEAADMDGNGAI--DYTEFTAATI 287
            ++S    D +R  LT+        + + E    +L EA+D   + A+     +F A   
Sbjct: 335 PSISNSAKDLIRKMLTQEPKKRITSAQVLEHPWLRLGEASDKPIDSAVLSRMKQFRAMNK 394

Query: 288 QRQKL------ERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKK 338
            ++        E  + L   F   D DNSG   Y+E ++                     
Sbjct: 395 LKKLALKNLSEEEIKGLKAMFDNIDTDNSGTITYEELKS--------------------- 433

Query: 339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDK 398
            GL           +K+L+   D+DGNG ID+IEF+      ++LE  E L KAFQ+ DK
Sbjct: 434 -GLARLGSKLTETEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLFKAFQHFDK 492

Query: 399 NSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           +   FIT +ELE A KE  MGD+ATIKEII+EV  D+
Sbjct: 493 DHSGFITRDELENAMKEYGMGDEATIKEIITEVDTDN 529

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727903|ref|NP_001235641.1| calmodulin-like domain protein kinase isoenzyme gamma [Glycine max] gi|2501766|gb|AAB80693.1| calmodulin-like domain protein kinase isoenzyme gamma [Glycine max]

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 190/442 (42%), Positives = 255/442 (57%), Gaps = 35/442 (7%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           ILGK +EDV   ++ G+ LGRG+FGVTYLCTENST + YACKS++K+ K+    +   I+
Sbjct: 72  ILGKQFEDVKQFHTLGKELGRGQFGVTYLCTENSTGLQYACKSISKR-KLASKSDKEDIK 130

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           REIQI + LSGQPNIVE K A+ED ++VHVVMELC GG+LFDRIIAKG+YSE+ AA + R
Sbjct: 131 REIQIMQHLSGQPNIVEFKGAYEDRSSVHVVMELCAGGELFDRIIAKGHYSEKAAASICR 190

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEA 187
            IVN V++CH MGVMHRDLKPENF   SRD+NALLK TDFG ++ F EEG       G A
Sbjct: 191 QIVNVVHICHFMGVMHRDLKPENFLLSSRDENALLKATDFGLSV-FIEEGKVYRDIVGSA 249

Query: 188 SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL--------PGEETQALKEKFIEMDTDKNG 239
                 +LR    RR  K   +    ++ Y+          E  + + +  +E   D   
Sbjct: 250 YYVAPEVLR----RRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFES 305

Query: 240 TLSYDELRAGLTKVGSMLTEFDVKQLMEAADM------DGNGAIDYTEFTAATIQRQKLE 293
               +   +    V  ML +   K++  A  +      DGN +       +A + R K  
Sbjct: 306 QPWPNISDSAKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNAS--DKPIDSAVLSRMKQF 363

Query: 294 RS-EYLSKAFQYFDKDNSGYDE---FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           R+   L K       +N   +E    +AM  +  T ++ +  Y +   K GL        
Sbjct: 364 RAMNKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGTITYEEL--KSGLHRLGSKLT 421

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
              +K+L+   D+DGNG+ID+IEF+      +KLE  + L KAFQY DK++  FIT +EL
Sbjct: 422 EAEVKQLMEAADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDNSGFITRDEL 481

Query: 410 ETAFKENNMGDDATIKEIISEV 431
           E+A KE  MGDDATIKEIISEV
Sbjct: 482 ESAMKEYGMGDDATIKEIISEV 503

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	436
TAIR|locus:2092399	541	CPK9 "calmodulin-domain protei	0.401	0.323	0.619	3.8e-95
TAIR|locus:2015846	521	CPK33 "calcium-dependent prote	0.383	0.320	0.642	4.8e-95
TAIR|locus:2036783	551	CPK19 "calcium-dependent prote	0.408	0.323	0.527	4.4e-90
TAIR|locus:2150225	523	CPK34 "AT5G19360" [Arabidopsis	0.399	0.332	0.570	7.2e-88
TAIR|locus:2177023	528	CPK17 "calcium-dependent prote	0.399	0.329	0.576	9.1e-88
TAIR|locus:2128409	529	CDPK6 "calcium-dependent prote	0.396	0.327	0.545	8.2e-85
TAIR|locus:2827528	544	CPK6 "calcium dependent protei	0.389	0.312	0.514	5.8e-82
TAIR|locus:2122063	556	CPK5 "calmodulin-domain protei	0.389	0.305	0.508	2.8e-78
TAIR|locus:2175503	610	CPK1 "calcium dependent protei	0.408	0.291	0.497	1.5e-77
TAIR|locus:2014691	495	CDPK2 "AT1G35670" [Arabidopsis	0.371	0.327	0.521	1.5e-77

TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
 Identities = 109/176 (61%), Positives = 133/176 (75%)

Query:     7 KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY 66
             K+  +   IL   +EDV L Y+ G+ LGRG+FGVTYLCTENST   YACKS++KK  +  
Sbjct:    71 KTTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTK 130

Query:    67 AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE 126
             A+ D M RREIQI + LSGQPNIVE K A+EDE AV++VMELC GG+LFDRIIAKG+Y+E
Sbjct:   131 ADKDDM-RREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTE 189

Query:   127 RDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
             R AA V R IVN V +CH MGV+HRDLKPENF   S+D+ AL+K TDFG ++  EE
Sbjct:   190 RAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEE 245

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0007165 "signal transduction" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
 Identities = 108/168 (64%), Positives = 130/168 (77%)

Query:    15 ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
             IL KPYEDV L Y+  + LGRG+FGVTYLCTE ST   +ACKS++KK  +   + + M R
Sbjct:    61 ILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDM-R 119

Query:    75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
             REIQI + LSGQPNIVE K A+EDE AV++VMELC GG+LFDRI+AKG+YSER AA V R
Sbjct:   120 REIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCR 179

Query:   135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
              IVN VN+CH MGVMHRDLKPENF   S+D+ AL+K TDFG ++  EE
Sbjct:   180 QIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEE 227

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 519 (187.8 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
 Identities = 96/182 (52%), Positives = 137/182 (75%)

Query:    10 RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
             +Q  PILG+P+ED+   YS GR LGRG+FG+TY+CTE S+   +ACKS+ K+  ++  + 
Sbjct:    81 QQPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDR 140

Query:    70 DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
             +  +RREIQI   LSGQPNIVE+K A+ED  +VH+VMELC+GG+LFD+I  +G+YSE+ A
Sbjct:   141 ED-VRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAA 199

Query:   130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSALLFEEEGGEAS 188
             A ++R++V  V +CH MGV+HRDLKPENF   S+D+ +++LK TDFG ++  EE  G+  
Sbjct:   200 AEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEE--GKVY 257

Query:   189 DD 190
             +D
Sbjct:   258 ED 259

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
 Identities = 101/177 (57%), Positives = 137/177 (77%)

Query:    14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI 73
             P+LG+P EDV   Y+ G+ LGRG+FGVT+LCT+ +T + +ACK++AK+ K+   E+   +
Sbjct:    55 PVLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKR-KLVNKEDIEDV 113

Query:    74 RREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL 133
             RRE+QI   L+GQPNIVELK A+ED+ +VH+VMELC GG+LFDRIIAKG+YSER AA +L
Sbjct:   114 RREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLL 173

Query:   134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDD 190
             R IV  ++ CHSMGV+HRDLKPENF  +S+D+N+ LK TDFG ++ ++   GE   D
Sbjct:   174 RTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKP--GEVFKD 228

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0004672 "protein kinase activity" evidence=IDA

TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
 Identities = 102/177 (57%), Positives = 136/177 (76%)

Query:    14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI 73
             P+LG+P EDV   YS G+ LGRG+FGVT+LCT+ +T   +ACK++AK+ K+   E+   +
Sbjct:    60 PVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKR-KLVNKEDIEDV 118

Query:    74 RREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL 133
             RRE+QI   L+GQPNIVELK A+ED+ +VH+VMELC GG+LFDRIIAKG+YSER AA +L
Sbjct:   119 RREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLL 178

Query:   134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDD 190
             R IV  V+ CHSMGV+HRDLKPENF  +++D+N+ LK TDFG ++ ++   GE   D
Sbjct:   179 RTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKP--GEVFKD 233

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
 Identities = 95/174 (54%), Positives = 127/174 (72%)

Query:     8 SQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
             S +Q   ILG+P E+V   Y FGR LGRG+FGVTYL T   T    ACKS+  + ++ + 
Sbjct:    59 STQQNGRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTR-RLVHK 117

Query:    68 ENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER 127
             ++   +RRE+QI   LSG  NIV+LK A+ED  +V+++MELC+GG+LFDRII+KG YSER
Sbjct:   118 DDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSER 177

Query:   128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
              AA + R +V  V+ CHSMGVMHRDLKPENF F+S+D+N+ LK TDFG ++ F+
Sbjct:   178 AAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFK 231

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0051049 "regulation of transport" evidence=RCA

TAIR|locus:2827528 CPK6 "calcium dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 456 (165.6 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
 Identities = 88/171 (51%), Positives = 120/171 (70%)

Query:    11 QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND 70
             Q Y +LG    ++   Y+  R LG+G+FG TYLCT+ +T + YACKS++K+ K+   E+ 
Sbjct:    69 QSYYVLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKR-KLISKEDV 127

Query:    71 MMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
               +RREIQI   L+G  NIV +K A+ED   VH+VMELC GG+LFDRII +G+YSER AA
Sbjct:   128 EDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAA 187

Query:   131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
              + + IV  V  CHS+GVMHRDLKPENF  +++DD+  LK  DFG ++ F+
Sbjct:   188 ELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 238

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=RCA;IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006820 "anion transport" evidence=RCA

GO:0006862 "nucleotide transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015696 "ammonium transport" evidence=RCA

GO:0015802 "basic amino acid transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0043269 "regulation of ion transport" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2122063 CPK5 "calmodulin-domain protein kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
 Identities = 87/171 (50%), Positives = 120/171 (70%)

Query:    11 QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND 70
             Q Y +LG    ++   Y+  R LG+G+FG TYLCTE ++ + YACKS++K+ K+   E+ 
Sbjct:    81 QAYYVLGHKTPNIRDIYTLSRKLGQGQFGTTYLCTEIASGVDYACKSISKR-KLISKEDV 139

Query:    71 MMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
               +RREIQI   L+G  +IV +K A+ED   VH+VMELC GG+LFDRII +G+YSER AA
Sbjct:   140 EDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIVMELCAGGELFDRIIQRGHYSERKAA 199

Query:   131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
              + + IV  V  CHS+GVMHRDLKPENF  +++DD+  LK  DFG ++ F+
Sbjct:   200 ELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK 250

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
 Identities = 89/179 (49%), Positives = 125/179 (69%)

Query:     5 VSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM 64
             VS +  +   +L +  E+    YS GR LG+G+FG T+LC E +T   +ACKS+AK+ K+
Sbjct:   128 VSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKR-KL 186

Query:    65 KYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY 124
                E+   +RREIQI   L+G PN++ +K A+ED  AVH+VME C GG+LFDRII +G+Y
Sbjct:   187 LTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHY 246

Query:   125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             +ER AA + R IV  V  CHS+GVMHRDLKPENF F+S+ +++LLK  DFG ++ F+ +
Sbjct:   247 TERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPD 305

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=NAS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2014691 CDPK2 "AT1G35670" [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
 Identities = 86/165 (52%), Positives = 118/165 (71%)

Query:    19 PYEDVML--HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
             PY+   L  HY  G+ LG+G+FG TYLCTE ST+  YACKS+ K+ K+   E+   + RE
Sbjct:    16 PYQTPRLRDHYLLGKKLGQGQFGTTYLCTEKSTSANYACKSIPKR-KLVCREDYEDVWRE 74

Query:    77 IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
             IQI   LS  PN+V +K  +ED   VH+VME+C+GG+LFDRI++KG++SER+A  +++ I
Sbjct:    75 IQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGHFSEREAVKLIKTI 134

Query:   137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
             +  V  CHS+GVMHRDLKPENF F S  D+A LK TDFG ++ ++
Sbjct:   135 LGVVEACHSLGVMHRDLKPENFLFDSPKDDAKLKATDFGLSVFYK 179

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=ISS;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:1901979 "regulation of inward rectifier potassium channel activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_302426.1 annotation not avaliable (541 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	436
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-45
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-45
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-33
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-27
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-26
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-26
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-23
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-21
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-21
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-20
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-19
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-19
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-19
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-18
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-18
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-18
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-17
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-17
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-16
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-16
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-15
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-15
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	6e-15
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-15
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-15
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	1e-14
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-14
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-14
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-14
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-14
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-14
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-14
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	5e-14
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-14
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	9e-14
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-13
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-13
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-13
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-13
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-13
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-13
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-13
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-13
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	6e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-12
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-12
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-12
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-12
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-12
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-12
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	6e-12
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	9e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-11
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-11
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-11
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-11
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-11
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-11
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-11
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	4e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-11
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	6e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-11
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-11
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-10
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-10
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-10
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	3e-10
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-10
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-10
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	5e-10
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	6e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-10
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	8e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-09
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-09
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	3e-09
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-09
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	5e-09
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-09
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	7e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-09
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-09
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-08
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-08
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-08
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-08
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-08
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-08
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-08
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	5e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	6e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-08
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-08
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-07
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-07
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	2e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-07
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	5e-07
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-07
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	1e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-06
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	4e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-06
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-06
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	7e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	9e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	4e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	5e-05
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	9e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-04
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-04
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-04
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	7e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	8e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-04
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	0.001
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.001
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.001
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.001
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.001
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.001
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.001
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.001
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.001
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	0.002
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	0.002
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.002
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.002
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	0.002
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	0.003
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.003
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.003
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	0.003
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.003
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.004
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  158 bits (401), Expect = 2e-45
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 6/163 (3%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R LG G FG  Y      T    A K + K+ +    + D   RREI+I R LS  
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKS--KKDQTARREIRILRRLSH- 57

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  A ED+  +++VME C+GGDLFD +   G  SE +A  +   I+  +   HS 
Sbjct: 58  PNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSN 117

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           G++HRDLKPEN   +  +    +K+ DFG A    +     + 
Sbjct: 118 GIIHRDLKPENI-LLDENGV--VKIADFGLAKKLLKSSSSLTT 157

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  157 bits (400), Expect = 2e-45
 Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 7/158 (4%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG G FG  YL  +  T    A K + KK   K  E    I REI+I + L   
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRER---ILREIKILKKL-KH 56

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L    EDE  +++VME C+GGDLFD +  +G  SE +A   LR I++A+   HS 
Sbjct: 57  PNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSK 116

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           G++HRDLKPEN   +  D +  +K+ DFG A   +   
Sbjct: 117 GIVHRDLKPENI-LLDEDGH--VKLADFGLARQLDPGE 151

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  123 bits (312), Expect = 4e-33
 Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 7/158 (4%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  YL  +  T    A K + K+      E    + REI+I + L+  PNIV+L
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE---ELLREIEILKKLNH-PNIVKL 56

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
               EDE  +++VME C+GG L D +    G  SE +   +L  I+  +   HS G++HR
Sbjct: 57  YGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR 116

Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           DLKPEN    S +    +K+ DFG + L   +      
Sbjct: 117 DLKPENILLDSDNGK--VKLADFGLSKLLTSDKSLLKT 152

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  109 bits (274), Expect = 4e-27
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK-----PKMKYAENDMMIRREIQIRR 81
           + FG+++G G F    L  E  TN  YA K + K+      K+KY      I +E+  R 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYV----KIEKEVLTR- 57

Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            L+G P I++L    +DE  ++ V+E    G+L   I   G   E+        I+ A+ 
Sbjct: 58  -LNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE 116

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFR 201
             HS G++HRDLKPEN      D +  +K+TDFG+A + +      S+         Q  
Sbjct: 117 YLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIE 173

Query: 202 RM 203
           + 
Sbjct: 174 KN 175

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  110 bits (274), Expect = 1e-26
 Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 9/169 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y   R LG G FG  YL  +       A K +AKK     ++      REIQI   L+ 
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR---KLVALKVLAKK-LESKSKEVERFLREIQILASLNH 56

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI---IAKGYYSERDAAPVLRAIVNAVNV 142
            PNIV+L    +DE ++++VME   GG L D +     KG  SE +A  +L  I++A+  
Sbjct: 57  PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
            HS G++HRD+KPEN   +   D  ++K+ DFG A L  + G  +S   
Sbjct: 117 LHSKGIIHRDIKPEN--ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPA 163

Length = 384

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  104 bits (262), Expect = 9e-26
 Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG+G FG   L  +  T   YA K + KK  +K  E +     E  I   ++  P IV+L
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHT-LTERNILSRIN-HPFIVKL 58

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             A + E  +++V+E   GG+LF  +  +G +SE  A      IV A+   HS+G+++RD
Sbjct: 59  HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRD 118

Query: 153 LKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           LKPEN      D +  +K+TDFG A     EG   + 
Sbjct: 119 LKPENILL---DADGHIKLTDFGLAKELSSEGSRTNT 152

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 96.9 bits (242), Expect = 8e-23
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 8/150 (5%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           G +LGRG FG  YL  +  T    A KS+      +  E    + REI+I   L   PNI
Sbjct: 5   GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EELEALEREIRILSSLQ-HPNI 61

Query: 90  VELKSAHEDETAVH--VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           V    +  DE      + +E   GG L   +   G   E       R I+  +   HS G
Sbjct: 62  VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG 121

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++HRD+K  N   I  D + ++K+ DFG A
Sbjct: 122 IVHRDIKGAN---ILVDSDGVVKLADFGCA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 93.3 bits (233), Expect = 1e-21
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 20/156 (12%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           + +G+G FG  YL    S    Y  K     +M++K + + A N      E++I + L+ 
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKER-EDALN------EVKILKKLN- 57

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI----IAKGYYSERDAAPVLRAIVNAVN 141
            PNI++   + E++  + +VME   GGDL  +I         + E         +  A+ 
Sbjct: 58  HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK 117

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             HS  ++HRD+KP+N  F++ +   L+K+ DFG +
Sbjct: 118 YLHSRKILHRDIKPQNI-FLTSNG--LVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 93.9 bits (234), Expect = 1e-21
 Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 26/169 (15%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     +G G  G+ +   +  T    A K +A +       N  +  REI+  +     
Sbjct: 2   YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQAL--REIKALQACQ-H 58

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRI----------IAKGYYSERDAAPVLRAI 136
           P +V+L       +   +VME     DL + +            K Y         +R +
Sbjct: 59  PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSY---------MRML 108

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
           +  V   H+ G+MHRDLKP N   IS D    LK+ DFG A LF EE  
Sbjct: 109 LKGVAYMHANGIMHRDLKPAN-LLISADGV--LKIADFGLARLFSEEEP 154

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 89.9 bits (224), Expect = 3e-20
 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLS 84
           + F + LG G FG   L     +   YA K ++K    K+K  E+   +  E +I + + 
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEH---VLNEKRILQSIR 59

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +V L  + +D++ +++VME   GG+LF  +   G + E  A      +V A+   H
Sbjct: 60  -HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S+ +++RDLKPEN   +  D +  +K+TDFG A
Sbjct: 119 SLDIVYRDLKPEN---LLLDSDGYIKITDFGFA 148

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 88.5 bits (220), Expect = 3e-19
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-------YAENDMMIRREIQI 79
           +   +++GRG FG  +L  +  T   YA K + K   +K        AE D++       
Sbjct: 3   FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD----- 57

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
               +  P IV+L  + +DE  +++VME   GGDL + +I K  + E  A   +  +V A
Sbjct: 58  ----ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLA 113

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQ 199
           ++  H +G +HRD+KP+N   I  D +  +K+ DFG      +              + +
Sbjct: 114 LDSVHKLGFIHRDIKPDNI-LIDADGH--IKLADFGLCKKMNKAKDREYYLNDSHNLLFR 170

Query: 200 FRR 202
              
Sbjct: 171 DNV 173

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQ-PNIV 90
           + +G +G  +L  + ST   YA K + K   ++  + D ++  R+I    L   Q P +V
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDI----LSQAQSPYVV 56

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           +L  + + +  +++VME   GGDL   +   G   E  A   +  IV A+   HS G++H
Sbjct: 57  KLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLKP+N   I  D N  LK+TDFG
Sbjct: 117 RDLKPDN---ILIDSNGHLKLTDFG 138

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 85.4 bits (212), Expect = 9e-19
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 5/145 (3%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG   L    S N  +A K + K+  ++  + +  I  E +I    +  P IV+L
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEH-IFSEKEILEECN-HPFIVKL 58

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
               +D+  ++++ME C GG+L+  +  +G + E  A   +  +V A    H+ G+++RD
Sbjct: 59  YRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRD 118

Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           LKPEN      D N  +K+ DFG A
Sbjct: 119 LKPENLLL---DSNGYVKLVDFGFA 140

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 13/155 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     +G+G FG  Y      T    A K +  + K K  +    I  EIQI +    
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEK----IINEIQILKKCK- 55

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNV 142
            PNIV+   ++  +  + +VME C GG L D  + K      +E   A V + ++  +  
Sbjct: 56  HPNIVKYYGSYLKKDELWIVMEFCSGGSLKD--LLKSTNQTLTESQIAYVCKELLKGLEY 113

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            HS G++HRD+K  N   I    +  +K+ DFG +
Sbjct: 114 LHSNGIIHRDIKAAN---ILLTSDGEVKLIDFGLS 145

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 84.1 bits (209), Expect = 3e-18
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + LG G FG  YL     T    A K M KK    Y+  + M  RE++  R L+  
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKK---FYSWEECMNLREVKSLRKLNEH 57

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCH 144
           PNIV+LK    +   ++ V E  +G +L+  +       +SE     ++  I+  +   H
Sbjct: 58  PNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH 116

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             G  HRDLKPEN   +S  +  ++K+ DFG A
Sbjct: 117 KHGFFHRDLKPENL-LVSGPE--VVKIADFGLA 146

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
           H+   R++G+G FG   +  +  T   +A K M K+   +     N   +  E   RR+L
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRN---VLNE---RRIL 54

Query: 84  SG--QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
                P +V L  + +DE  +++V++L  GGDL   +  K  +SE      +  IV A+ 
Sbjct: 55  QELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALE 114

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
             HS G++HRD+KP+N   I  D+   + +TDF  A          +  TS
Sbjct: 115 YLHSKGIIHRDIKPDN---ILLDEQGHVHITDFNIATKV--TPDTLTTSTS 160

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 82.8 bits (205), Expect = 7e-18
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 20/156 (12%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMA-KKPKMKYAENDMMIRREIQIRRLLSGQPN 88
           G  +G G FG  Y      T    A K +  +    K  +    I  E+++  LL   PN
Sbjct: 5   GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKE---IADEMKVLELLK-HPN 60

Query: 89  IVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN----AVNV 142
           +V+      H ++  V++ ME C GG L + +       E     V+R         +  
Sbjct: 61  LVKYYGVEVHREK--VYIFMEYCSGGTLEELLEHGRILDEH----VIRVYTLQLLEGLAY 114

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            HS G++HRD+KP N   I  D N ++K+ DFG A+
Sbjct: 115 LHSHGIVHRDIKPAN---IFLDHNGVIKLGDFGCAV 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 82.5 bits (205), Expect = 1e-17
 Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 30/166 (18%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLS 84
           Y     LG G +GV Y   +  T    A K +    ++   E  +     REI + + L 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI----RLDNEEEGIPSTALREISLLKELK 56

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDL----------FDRIIAKGYYSERDAAPVLR 134
             PNIV+L      E  +++V E C   DL              + K           + 
Sbjct: 57  -HPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSI---------MY 105

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            ++  +  CHS  ++HRDLKP+N   I+RD    LK+ DFG A  F
Sbjct: 106 QLLRGLAYCHSHRILHRDLKPQNI-LINRDGV--LKLADFGLARAF 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 15/157 (9%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN--DMMIRREIQIRRLLS 84
           Y  G+ LG G + V Y   +  T    A K + K  + K A++  +    REI++ + L 
Sbjct: 2   YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI-KLGERKEAKDGINFTALREIKLLQELK 60

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDL----FDRIIAKGYYSERDAAPVLRAIVNAV 140
             PNI+ L      ++ +++V E  +  DL     D+ I     +  D    +   +  +
Sbjct: 61  -HPNIIGLLDVFGHKSNINLVFEFMET-DLEKVIKDKSI---VLTPADIKSYMLMTLRGL 115

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              HS  ++HRDLKP N   I    + +LK+ DFG A
Sbjct: 116 EYLHSNWILHRDLKPNN-LLI--ASDGVLKLADFGLA 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 24/160 (15%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA-KKPKMKYAENDMMIRREIQIRRLLS 84
            Y     +G G  G  Y  T+ +T    A K M  +K   +   N+++I ++ +      
Sbjct: 20  LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK------ 73

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY-SERDAAPVLRAIVNAVNVC 143
             PNIV+   ++     + VVME   GG L D I       +E   A V R ++  +   
Sbjct: 74  -HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYL 132

Query: 144 HSMGVMHRDLKPENFCFISRDDNALL------KVTDFGSA 177
           HS  V+HRD+K          DN LL      K+ DFG A
Sbjct: 133 HSQNVIHRDIK---------SDNILLSKDGSVKLADFGFA 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRL 82
           Y    ++G G +GV   C   +T    A K      K K +E+D  ++    RE+++ R 
Sbjct: 3   YEVLGVVGEGAYGVVLKCRNKATGEIVAIK------KFKESEDDEDVKKTALREVKVLRQ 56

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI---VNA 139
           L    NIV LK A   +  +++V E      L + + A       DA  V   I   + A
Sbjct: 57  LR-HENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDA--VRSYIWQLLQA 112

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  CHS  ++HRD+KPEN   I   ++ +LK+ DFG A
Sbjct: 113 IAYCHSHNIIHRDIKPEN---ILVSESGVLKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 75.6 bits (187), Expect = 2e-15
 Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 22/158 (13%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPY----ACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           + G+ LG G FG  Y               A K   K+      +      RE +I R L
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVK-TLKEDAS--EQQIEEFLREARIMRKL 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              PN+V+L     +E  +++VME  +GGDL   +        R    +   +  A+ + 
Sbjct: 59  D-HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIA 112

Query: 144 ------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                  S   +HRDL   N C +  +     K++DFG
Sbjct: 113 RGMEYLESKNFIHRDLAARN-CLVGENLVV--KISDFG 147

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQPN 88
           G++LG+G FG  YLC +  T    A K +   P     + ++  +  EIQ+ + L     
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HER 65

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           IV+      D+  + + ME   GG + D++ A G  +E       R I+  V   HS  +
Sbjct: 66  IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI 125

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N   I RD    +K+ DFG++
Sbjct: 126 VHRDIKGAN---ILRDSAGNVKLGDFGAS 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 21/158 (13%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG        S       K +     M   E   ++  E+ I R L   PNIV  
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEI-DYGNMTEKEKQQLVS-EVNILRELK-HPNIVRY 64

Query: 93  KSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAP------VLRAIVNAVNVCH 144
                D +   +++VME C+GGDL  ++I K    ER          +L  ++ A+  CH
Sbjct: 65  YDRIIDRSNQTLYIVMEYCEGGDL-AQLIQK-CKKERKYIEEEFIWRILTQLLLALYECH 122

Query: 145 -----SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
                   V+HRDLKP N  F+  ++N   K+ DFG A
Sbjct: 123 NRSDPGNTVLHRDLKPANI-FLDANNNV--KLGDFGLA 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 75.1 bits (185), Expect = 4e-15
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKK------PKMKYAENDMMIRREIQIRRLLSGQ 86
           +G G +GV Y   +  T    A K +  +      PK           REI++ + L+  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELN-H 57

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHS 145
           PNI++L      +  +++V E     DL+  I  +     E      L  ++  +  CHS
Sbjct: 58  PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS 116

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            G++HRDLKPEN   +  +   +LK+ DFG A  F
Sbjct: 117 HGILHRDLKPEN---LLINTEGVLKLADFGLARSF 148

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 74.1 bits (183), Expect = 5e-15
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 23/159 (14%)

Query: 28  SFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           + G+ LG G FG  Y  T     +   +  A K   K+   +    + +  RE +I R L
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVK-TLKEDASEQQIEEFL--REARIMRKL 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
              PNIV+L     +E  + +VME   GGDL D +        R     L  +++ A+ +
Sbjct: 59  D-HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKN-----RPKELSLSDLLSFALQI 112

Query: 143 C------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   S   +HRDL   N C +  +     K++DFG
Sbjct: 113 ARGMEYLESKNFIHRDLAARN-CLVGENLVV--KISDFG 148

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 75.2 bits (185), Expect = 6e-15
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 28/158 (17%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNI 89
           ++GRG FG   +  E +T   YA K M KK  +   E       E   R +LS    P I
Sbjct: 8   LVGRGHFGEVQVVREKATGDIYAMKVM-KKSVLLAQETVSFFEEE---RDILSISNSPWI 63

Query: 90  VELKSAHEDETAVHVVMELCQGGDL----------FDRIIAKGYYSERDAAPVLRAIVNA 139
            +L+ A +D+  +++VME   GGDL          FD  +A+ Y +E         +V A
Sbjct: 64  PQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAE---------LVLA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++  H MG +HRD+KPEN   +  D    +K+ DFGSA
Sbjct: 115 IHSVHQMGYVHRDIKPEN---VLIDRTGHIKLADFGSA 149

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 75.5 bits (186), Expect = 7e-15
 Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 9/147 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL--SGQPN 88
           +++GRG FG   L  +  T   YA K + +K +M   E    +R E   R +L  +  P 
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMKKL-RKSEMLEKEQVAHVRAE---RDILAEADNPW 62

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L  + +DE  ++++ME   GGD+   ++ K  ++E +    +   + A++  H +G 
Sbjct: 63  VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY 122

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           +HRD+KP+N      D    +K++DFG
Sbjct: 123 IHRDIKPDNLLL---DAKGHIKLSDFG 146

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (184), Expect = 7e-15
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR--------EIQIRRL 82
           ++LG+G  G  +L     T   +A K + KK          MI+R        E +I   
Sbjct: 7   KLLGKGDVGRVFLVRLKGTGKLFALKVLDKK---------EMIKRNKVKRVLTEQEILAT 57

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSERDAAPVLRAIVNAV 140
           L   P +  L ++ + ET + +VM+ C GG+LF   +       SE  A      ++ A+
Sbjct: 58  LD-HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLAL 116

Query: 141 NVCHSMGVMHRDLKPEN 157
              H +G+++RDLKPEN
Sbjct: 117 EYLHLLGIVYRDLKPEN 133

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 21/164 (12%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            L  E+ Q LKE F   D D +G +  +EL   L  +G   +E ++ +L E  D  GN  
Sbjct: 13  QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNET 71

Query: 277 IDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
           +D+ EF T  +++ ++ ++ E L +AF+ FDKD+ GY     +    +++          
Sbjct: 72  VDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGE-------- 123

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
                           +LK+     D DG+G ID+ EF  L+ D
Sbjct: 124 -------RLSDEEVEKLLKEY----DEDGDGEIDYEEFKKLIKD 156

Length = 160

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           R+LG G +G  +L      +     YA K + K   ++ A+     R E Q+   +   P
Sbjct: 6   RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            +V L  A + +T +H++++   GG+LF  +  + +++E +    +  IV A++  H +G
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG 125

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
           +++RD+K EN   I  D    + +TDFG +  F  E  E
Sbjct: 126 IIYRDIKLEN---ILLDSEGHVVLTDFGLSKEFLAEEEE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 8/159 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    S+   YA K ++K   +K +++      R+I      + 
Sbjct: 45  YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 101

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHS 160

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG++HRD+KP+N      D +  LK+ DFG+ +  +E G
Sbjct: 161 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETG 196

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-------YAENDMMIRREIQI 79
           +   +++GRG FG   L    S+   YA K ++K   +K       + E D+M       
Sbjct: 45  FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH----- 99

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
               +    IV+L  A +D+  +++VME   GGDL + +++     E+ A      +V A
Sbjct: 100 ----ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLA 154

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           ++  HSMG +HRD+KP+N      D +  LK+ DFG+ +  +  G    D
Sbjct: 155 LDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCD 201

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 17/151 (11%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI----QIRRLLSGQ 86
           + +G G FG   L  +  TN  YA K++ K         D+++R +       R +L+  
Sbjct: 7   KTIGIGAFGEVCLVRKVDTNALYAMKTLRKA--------DVLMRNQAAHVKAERDILAEA 58

Query: 87  PN--IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
            N  +V+L  + +D+  ++ VM+   GGD+   +I  G + E  A   +  +  A+   H
Sbjct: 59  DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            MG +HRD+KP+N   I RD +  +K+TDFG
Sbjct: 119 KMGFIHRDIKPDNI-LIDRDGH--IKLTDFG 146

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 9/163 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y+  R++G G FG   L    +++  YA K + + PK   A  D   R+E  +   +   
Sbjct: 2   YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI-RLPKSSSAVEDS--RKEAVLLAKMK-H 57

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKG-YYSERDAAPVLRAIVNAVNVCH 144
           PNIV  K + E +  +++VME C GGDL  +I + +G  + E         +   V   H
Sbjct: 58  PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH 117

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
              V+HRD+K +N  F+++  N  +K+ DFGSA L    G  A
Sbjct: 118 EKRVLHRDIKSKNI-FLTQ--NGKVKLGDFGSARLLTSPGAYA 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 16/158 (10%)

Query: 26  HYSFGRMLGRGRFG--VTYLCTENSTNMPYACKSMAK--KPKMKYAENDMMIRREIQIRR 81
           HY   R+LG+G FG    Y  TE+ + + +   ++ +  + + + A N      EI I  
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALN------EIVILS 54

Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII--AKGYYSERDAAPVLRAIVNA 139
           LL   PNI+   +   D+  + + ME   GG L+D+I+      + E      L  IV+A
Sbjct: 55  LLQ-HPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSA 113

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           V+  H  G++HRD+K  N  F+++    L+K+ DFG +
Sbjct: 114 VSYIHKAGILHRDIKTLNI-FLTKAG--LIKLGDFGIS 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN--IV 90
           +G+G +G  +L  +  T    A K M K    K  E    +R  +  R +L+   +  +V
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNE----VRHVLTERDILTTTKSEWLV 64

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           +L  A +D+  +++ ME   GGD    +   G  SE  A   +  +  AV+  H +G +H
Sbjct: 65  KLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIH 124

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLKPENF  I    +  +K+TDFG
Sbjct: 125 RDLKPENF-LIDASGH--IKLTDFG 146

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 73.0 bits (179), Expect = 3e-14
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 4/144 (2%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI-RREIQIRRLLSGQPNIVE 91
           +G+G FG  Y   +  T   YA K ++KK  +   E    I  R I +R LL   P IV 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
           LK + + ++ +++V +   GG+LF  +  +G +SE  A   +  +V A+   H   +++R
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120

Query: 152 DLKPENFCFISRDDNALLKVTDFG 175
           DLKPEN   I  D    + + DFG
Sbjct: 121 DLKPEN---ILLDATGHIALCDFG 141

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 11/148 (7%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G F          T   YA K M K  K     N++   REIQ  R LS  PNI+ L
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNL---REIQALRRLSPHPNILRL 63

Query: 93  KSAHEDETA--VHVVMELCQGGDLFDRIIAKGYY-SERDAAPVLRAIVNAVNVCHSMGVM 149
                D     + +V EL    +L++ I  +     E+     +  ++ +++  H  G+ 
Sbjct: 64  IEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIF 122

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSA 177
           HRD+KPEN   I  D   +LK+ DFGS 
Sbjct: 123 HRDIKPEN-ILIKDD---ILKLADFGSC 146

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 71.7 bits (176), Expect = 6e-14
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G FG  +L  +  +   YA K MA     ++K  ++   +  E ++ + +S  P I+
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQH---VHNEKRVLKEVS-HPFII 64

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L     D+  ++++ME   GG+LF  +   G +S          IV A+   HS  +++
Sbjct: 65  RLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVY 124

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
           RDLKPEN   + ++ +  +K+TDFG A
Sbjct: 125 RDLKPENI-LLDKEGH--IKLTDFGFA 148

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 68.2 bits (167), Expect = 9e-14
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 20/166 (12%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 274 NGAIDYTEFTAATIQRQKLERSE-YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K   SE  + +AF+ FD+D +G+        S   +R   H+ 
Sbjct: 61  NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGF-------ISAAELR---HVM 110

Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           T+  +K              + +++ + D+DG+G I++ EFV +M 
Sbjct: 111 TNLGEKL---------TDEEVDEMIREADVDGDGQINYEEFVKMMM 147

Length = 149

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 35  RGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS 94
           +G FG  YL  + ST   +A K + KK  M        ++ E  I  +    P + +L  
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIK-VLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYY 64

Query: 95  AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLK 154
           + + +  +++VME   GGD    I   G   E  A   +  +V  V   H  G++HRD+K
Sbjct: 65  SFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124

Query: 155 PENFCFISRDDNALLKVTDFG 175
           PEN      D    LK+TDFG
Sbjct: 125 PENLLI---DQTGHLKLTDFG 142

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 49/150 (32%), Positives = 85/150 (56%), Gaps = 13/150 (8%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--G 85
           ++LG+G FG  +L    T       YA K + KK  +K  +    +R +++ R +L+   
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVL-KKATLKVRDR---VRTKME-RDILAEVN 56

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P IV+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +  A++  HS
Sbjct: 57  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 116

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +G+++RDLKPEN   I  D+   +K+TDFG
Sbjct: 117 LGIIYRDLKPEN---ILLDEEGHIKLTDFG 143

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 11/170 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
           +Y  G ++GRG FGV Y      T    A K ++     K  E  +  I +EI + + L 
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISL---EKIKEEALKSIMQEIDLLKNLK 57

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV+   + E   ++++++E  + G L   I   G + E   A  +  ++  +   H
Sbjct: 58  -HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH 116

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
             GV+HRD+K  N    ++D     K+ DFG A    +      DD SV+
Sbjct: 117 EQGVIHRDIKAANI-LTTKDGVV--KLADFGVATKLNDVSK---DDASVV 160

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 17/157 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           LG+G FG    C   +T   YACK + KK  K +  E   +  ++I           IV 
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL---EKVSSRFIVS 57

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------HS 145
           L  A E +  + +VM L  GGDL   I    Y       P  RAI  A  +       H 
Sbjct: 58  LAYAFETKDDLCLVMTLMNGGDLKYHI----YNVGEPGFPEARAIFYAAQIICGLEHLHQ 113

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
             +++RDLKPEN   +  DD+  ++++D G A+  + 
Sbjct: 114 RRIVYRDLKPEN---VLLDDHGNVRISDLGLAVELKG 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 11/151 (7%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQP 87
           G  LG G FG   +     T   YA K + K+   KMK  ++   + +E  I   LS  P
Sbjct: 23  GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQH---VAQEKSILMELS-HP 78

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA-IVNAVNVCHSM 146
            IV +  + +DE  V+ ++E   GG+LF  +   G +   D A    A +V A    HS 
Sbjct: 79  FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN-DVAKFYHAELVLAFEYLHSK 137

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +++RDLKPEN      D+   +KVTDFG A
Sbjct: 138 DIIYRDLKPENLLL---DNKGHVKVTDFGFA 165

Length = 329

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ----IRRLLSGQ 86
           + LG G FG   L  +  T   YA K++ KK        D+++R ++      R +L+  
Sbjct: 7   KTLGIGAFGEVCLARKVDTKALYAMKTLRKK--------DVLLRNQVAHVKAERDILAEA 58

Query: 87  PN--IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
            N  +V L  + +D+  ++ VM+   GGD+   +I  G + E  A   +  +  AV   H
Sbjct: 59  DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            MG +HRD+KP+N   I RD +  +K+TDFG
Sbjct: 119 KMGFIHRDIKPDNI-LIDRDGH--IKLTDFG 146

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)

Query: 31  RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           ++LG G +G  +L  + S   +   YA K + K   ++ A+     R E Q+   +   P
Sbjct: 6   KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            +V L  A + +T +H++++   GG+LF  +  +  + E++       IV A+   H +G
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG 125

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
           +++RD+K EN   I  D N  + +TDFG +  F E+  E
Sbjct: 126 IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFHEDEVE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREIQIRRLLSGQ-PN 88
           LG+G  GV Y      T   YA K      K+    ++     + RE++   L S + P 
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALK------KIHVDGDEEFRKQLLRELKT--LRSCESPY 60

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM-G 147
           +V+   A   E  + +V+E   GG L D +   G   E   A + R I+  ++  H+   
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH 120

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           ++HRD+KP N   I+       K+ DFG
Sbjct: 121 IIHRDIKPSNL-LINSKGEV--KIADFG 145

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 68.9 bits (168), Expect = 5e-13
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 15/158 (9%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG    C   +T   YACK + KK ++K  + + M   E QI   ++ +  +V
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGESMALNEKQILEKVNSR-FVV 63

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
            L  A+E + A+ +V+ L  GGDL   I    Y+         RA+  A  +C      H
Sbjct: 64  SLAYAYETKDALCLVLTLMNGGDLKFHI----YHMGEAGFEEGRAVFYAAEICCGLEDLH 119

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
              +++RDLKPEN   I  DD+  ++++D G A+   E
Sbjct: 120 QERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPE 154

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 69.3 bits (169), Expect = 6e-13
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    ST   YA K ++K   +K +++      R+I      + 
Sbjct: 45  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 101

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 102 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 160

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG +HRD+KP+N      D +  LK+ DFG+ +   +EG
Sbjct: 161 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 196

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T+ ST    A K M   K+ + +   N+++I R+ Q        PNIV
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HPNIV 79

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ S++     + VVME  +GG L D I+     +E   A V  A++ A++  H+ GV+H
Sbjct: 80  EMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIH 138

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D     K++DFG
Sbjct: 139 RDIKSDSI-LLTSDGRV--KLSDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 31  RMLGRGRFGVTYL---CTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           ++LG G +G  +L    T + T   YA K + K   ++ A+     R E  +   +   P
Sbjct: 6   KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            +V L  A + E  +H++++   GG++F  +  +  +SE +       I+ A+   H +G
Sbjct: 66  FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG 125

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
           +++RD+K EN   I  D    + +TDFG +  F  E  E
Sbjct: 126 IVYRDIKLEN---ILLDSEGHVVLTDFGLSKEFLSEEKE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE-NDMMIRREIQIRRLLSGQPNI 89
           +++G+G FG   L    S    YA K + KK  +K  E N +M  R + ++ L    P +
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL--KHPFL 58

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V L  + +    ++ V++   GG+LF  +  +  + E  A      + +A+   HS+ ++
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNII 118

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKK 208
           +RDLKPEN   I  D    + +TDFG      +EG E  + TS      ++     L+K
Sbjct: 119 YRDLKPEN---ILLDSQGHVVLTDFGLC----KEGVEPEETTSTFCGTPEYLAPEVLRK 170

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 66.8 bits (164), Expect = 3e-12
 Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 48/189 (25%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSM---------AKKPKMKYAENDMMIRRE 76
            Y   + +G G +GV     +  T    A K +         AK+           I RE
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKR-----------ILRE 49

Query: 77  IQIRRLLSGQPNIVELKS-----AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP 131
           I++ R L    NI+ L       + ED   V++V EL +  DL  ++I     S +    
Sbjct: 50  IKLLRHL-RHENIIGLLDILRPPSPEDFNDVYIVTELMET-DL-HKVI----KSPQPLTD 102

Query: 132 ---------VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
                    +LR +       HS  V+HRDLKP N   +  + N  LK+ DFG A   + 
Sbjct: 103 DHIQYFLYQILRGL----KYLHSANVIHRDLKPSN-ILV--NSNCDLKICDFGLARGVDP 155

Query: 183 EGGEASDDT 191
           +  E    T
Sbjct: 156 DEDEKGFLT 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQPNI 89
             +G+G FG  Y   +  TN   A K +     ++ AE+++  I++EIQ        P I
Sbjct: 7   ECIGKGSFGEVYKAIDKRTNQVVAIKVI----DLEEAEDEIEDIQQEIQFLSQCR-SPYI 61

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
            +   +    + + ++ME C GG   D ++  G   E   A +LR ++  +   H  G +
Sbjct: 62  TKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHEEGKI 120

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSA 177
           HRD+K  N   I   +   +K+ DFG +
Sbjct: 121 HRDIKAAN---ILLSEEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 13/153 (8%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQ-IRRLLSGQ-PN 88
           ++GRG +G  Y      T    A K +     +   ++D+  I+RE+  + +L   Q PN
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKII----NLDTPDDDVSDIQREVALLSQLRQSQPPN 63

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMG 147
           I +   ++     + ++ME  +GG +  R + K G  +E+  + ++R ++ A+   H +G
Sbjct: 64  ITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKVG 121

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           V+HRD+K  N   ++   N  L   DFG A L 
Sbjct: 122 VIHRDIKAANI-LVTNTGNVKL--CDFGVAALL 151

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 7/154 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG    C   +T   YACK + KK ++K  + + M   E QI   ++ Q  +V
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKRLEKK-RIKKRKGESMALNEKQILEKVNSQ-FVV 63

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGV 148
            L  A+E + A+ +V+ +  GGDL   I   G   + E  A      I+  +   H    
Sbjct: 64  NLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           ++RDLKPEN   I  DD   ++++D G A+   E
Sbjct: 124 VYRDLKPEN---ILLDDYGHIRISDLGLAVKIPE 154

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 67.6 bits (165), Expect = 5e-12
 Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 11/144 (7%)

Query: 35  RGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR---LLSGQPNIVE 91
           RG FG  YL  + + +  YA K + KK  M    N  M+  ++Q  R    LS  P IV 
Sbjct: 14  RGAFGKVYLGRKKNNSKLYAVKVV-KKADMI---NKNMVH-QVQAERDALALSKSPFIVH 68

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
           L  + +    V++VME   GGD+   +   GY+ E  A   +  +  A++  H  G++HR
Sbjct: 69  LYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHR 128

Query: 152 DLKPENFCFISRDDNALLKVTDFG 175
           DLKP+N   IS + +  +K+TDFG
Sbjct: 129 DLKPDNM-LISNEGH--IKLTDFG 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 66.4 bits (162), Expect = 6e-12
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSG 85
              +G G  G  Y      T   YA K +       Y  ++  +R    REI+I R ++ 
Sbjct: 79  VNRIGSGAGGTVYKVIHRPTGRLYALKVI-------YGNHEDTVRRQICREIEILRDVN- 130

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PN+V+     +    + V++E   GG L    IA     E+  A V R I++ +   H 
Sbjct: 131 HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD----EQFLADVARQILSGIAYLHR 186

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRD+KP N    S  +   +K+ DFG
Sbjct: 187 RHIVHRDIKPSNLLINSAKN---VKIADFG 213

Length = 353

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 65.3 bits (159), Expect = 6e-12
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 6/162 (3%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSGQ-PNI 89
           ++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G  P I
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTGDCPFI 59

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V +  A      +  +++L  GGDL   +   G +SE +       I+  +   H+  V+
Sbjct: 60  VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVV 119

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 120 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 158

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.7 bits (157), Expect = 9e-12
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLS 84
           ++  G++LGRG FG  YLC +  T    A K +   P  +    ++  +  EIQ+ + L 
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62

Query: 85  GQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               IV+      D  E  + + +E   GG + D++ A G  +E       R I+  V+ 
Sbjct: 63  -HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSY 121

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            HS  ++HRD+K  N   I RD    +K+ DFG++
Sbjct: 122 LHSNMIVHRDIKGAN---ILRDSAGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 64.5 bits (157), Expect = 9e-12
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG FG+ +LC   +       K +  +   K        + E Q+ +LLS  PNI+
Sbjct: 6   RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLA--AQNECQVLKLLS-HPNII 62

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGV 148
           E      ++ A+ +VME   GG L + I  +      E         I+ A++  H+  +
Sbjct: 63  EYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI 122

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           +HRDLK +N          ++K+ DFG
Sbjct: 123 LHRDLKTQNILLDKH--KMVVKIGDFG 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 65.2 bits (159), Expect = 1e-11
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE-NDMMIRREIQIRRLLSGQPNI 89
           +++G+G FG   L    +    YA K + KK  +K  E   +M  R + ++ +    P +
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV--KHPFL 58

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V L  + +    ++ V++   GG+LF  +  +  + E  A      I +A+   HS+ ++
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNII 118

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           +RDLKPEN   I  D    + +TDFG      +EG E S  TS
Sbjct: 119 YRDLKPEN---ILLDSQGHVVLTDFGLC----KEGIEHSKTTS 154

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 19/152 (12%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKS-----MAKKPKMKY--AENDMMIRREIQIRRLL 83
           +++G+G FG   L  +  T   YA K+     M KK ++ +  AE D++           
Sbjct: 7   KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE--------- 57

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           S  P +V L  + +D   ++++ME   GGDL   +I    +SE      +   V A+   
Sbjct: 58  SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAV 117

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           H +G +HRD+KP+N   I  D    +K++DFG
Sbjct: 118 HKLGFIHRDIKPDN---ILIDRGGHIKLSDFG 146

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 64.4 bits (158), Expect = 1e-11
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 26/159 (16%)

Query: 29  FGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLL 83
            G+ LG G FG  Y  T       T    A K++    K   +E +      E  I + L
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL----KEGASEEEREEFLEEASIMKKL 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
           S  PNIV L         +++V E   GGDL D      +  +      L+ ++  A+ +
Sbjct: 59  S-HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLD------FLRKHGEKLTLKDLLQMALQI 111

Query: 143 C------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   S   +HRDL   N C ++ +     K++DFG
Sbjct: 112 AKGMEYLESKNFVHRDLAARN-CLVTENLVV--KISDFG 147

Length = 258

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 26  HYSFGRMLGRGRFGVTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
            Y    ++G G   V Y  +C  N+  +      + K         D + R+E+Q     
Sbjct: 2   DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ----TSVDEL-RKEVQAMSQC 56

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFD---RIIAKGYYSERDAAPVLRAIVNAV 140
           +  PN+V+  ++      + +VM    GG L D       +G   E   A VL+ ++  +
Sbjct: 57  N-HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGL 115

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFE 181
              HS G +HRD+K  N   I   ++  +K+ DFG SA L +
Sbjct: 116 EYLHSNGQIHRDIKAGN---ILLGEDGSVKIADFGVSASLAD 154

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 23/166 (13%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    ++G G +G  Y      T    A K M         + +  I+ E  I R  S  
Sbjct: 8   FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNH 62

Query: 87  PNIVELKSA--------HEDETAVHVVMELCQGG---DLFDRIIAKG-YYSERDAAPVLR 134
           PNI     A        ++D+  + +VMELC GG   DL   +  KG    E   A +LR
Sbjct: 63  PNIATFYGAFIKKNPPGNDDQ--LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALL 179
             +  +   H   V+HRD+K +N   I    NA +K+ DFG SA L
Sbjct: 121 ETLRGLAYLHENKVIHRDIKGQN---ILLTKNAEVKLVDFGVSAQL 163

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 17/151 (11%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ----IRRLLSGQ 86
           + LG G FG   L  +  T+  YA K++ KK        D++ R ++      R +L+  
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKK--------DVLNRNQVAHVKAERDILAEA 58

Query: 87  PN--IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
            N  +V+L  + +D+  ++ VM+   GGD+   +I    + E  A   +  +  A+   H
Sbjct: 59  DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            MG +HRD+KP+N   I  D +  +K+TDFG
Sbjct: 119 KMGFIHRDIKPDN---ILIDLDGHIKLTDFG 146

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 7/155 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLS 84
           ++  G++LG+G FG  YLC +  T    A K +   P+      ++  +  EIQ+ + L 
Sbjct: 3   NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62

Query: 85  GQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
            +  IV+      D  E  + + ME   GG + D++ + G  +E       R I+  V+ 
Sbjct: 63  HE-RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSY 121

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            HS  ++HRD+K  N   I RD    +K+ DFG++
Sbjct: 122 LHSNMIVHRDIKGAN---ILRDSVGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSGQ-PNI 89
           ++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G  P I
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTGDCPFI 59

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V +  A      +  +++L  GGDL   +   G +SE++       I+  +   H+  V+
Sbjct: 60  VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVV 119

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 120 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 158

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G +G  Y      T    A K +  +      E+   I +EI I +     P IV+ 
Sbjct: 11  LGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQEIIKEISILKQ-CDSPYIVKY 63

Query: 93  KSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
             ++   T + +VME C  G + D  +I  K   +E + A +L   +  +   HS   +H
Sbjct: 64  YGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTL-TEEEIAAILYQTLKGLEYLHSNKKIH 122

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K  N   I  ++    K+ DFG
Sbjct: 123 RDIKAGN---ILLNEEGQAKLADFG 144

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 19/152 (12%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIRRLL-- 83
           ++LG+G FG   L  E +T   YA K + K         +++I ++     +   R+L  
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKK---------EVIIAKDEVAHTLTESRVLQN 51

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           +  P +  LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A+   
Sbjct: 52  TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYL 111

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           HS  V++RDLK EN      D +  +K+TDFG
Sbjct: 112 HSCDVVYRDLKLENLML---DKDGHIKITDFG 140

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + +G G FG   L         Y  K +    KM   E +   R+E+ +   +   
Sbjct: 2   YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINIS-KMSPKEREES-RKEVAVLSNMK-H 58

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGY-YSERDAAPVLRAIVNAVNVCH 144
           PNIV+ + + E+   +++VM+ C+GGDL+ +I A +G  + E         I  A+   H
Sbjct: 59  PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              ++HRD+K +N  F+++D    +K+ DFG A
Sbjct: 119 DRKILHRDIKSQNI-FLTKD--GTIKLGDFGIA 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +++GRG FG   L  +  T   YA K + +K  M   E    IR E  I     G   +V
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMK-ILRKADMLEKEQVAHIRAERDILVEADGAW-VV 64

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           ++  + +D+  ++++ME   GGD+   ++ K   SE      +   V A++  H +G +H
Sbjct: 65  KMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIH 124

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+KP+N      D    +K++DFG
Sbjct: 125 RDIKPDNLLL---DAKGHVKLSDFG 146

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMA---KKPKMKYAENDMMIRREIQIRRLLSGQP 87
           R +G G FG  Y   +  TN   A K M+   K+   K+ +    I +E++  + L   P
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD----IIKEVRFLQQLR-HP 75

Query: 88  NIVELKSAHEDETAVHVVMELCQG--GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
           N +E K  +  E    +VME C G   D+ +  + K    E + A +    +  +   HS
Sbjct: 76  NTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHS 133

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
              +HRD+K  N   I   +   +K+ DFGSA L
Sbjct: 134 HERIHRDIKAGN---ILLTEPGTVKLADFGSASL 164

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 34/171 (19%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV + C    T    A K      K   +E+D +I+    REI++ + L   PN
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIK------KFVESEDDPVIKKIALREIRMLKQLK-HPN 61

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP----------VLRAIVN 138
           +V L      +  +H+V E C    L          +E +  P          ++   + 
Sbjct: 62  LVNLIEVFRRKRKLHLVFEYCDHTVL----------NELEKNPRGVPEHLIKKIIWQTLQ 111

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           AVN CH    +HRD+KPEN   I++     +K+ DFG A +    G + +D
Sbjct: 112 AVNFCHKHNCIHRDVKPENI-LITKQG--QIKLCDFGFARILTGPGDDYTD 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 62.9 bits (153), Expect = 5e-11
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG    C   +T   YACK + KK ++K  + + M   E QI   ++    +V
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVN-SRFVV 63

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
            L  A+E + A+ +V+ L  GGDL   I    Y          RA+  A  +       H
Sbjct: 64  SLAYAYETKDALCLVLTLMNGGDLKFHI----YNMGNPGFDEERAVFYAAEITCGLEDLH 119

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
              +++RDLKPEN   I  DD   ++++D G A+
Sbjct: 120 RERIVYRDLKPEN---ILLDDYGHIRISDLGLAV 150

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 63.0 bits (153), Expect = 5e-11
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G+G  G  Y   + +T    A K M   ++PK +   N++++ RE +        PNIV
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-------HPNIV 79

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
               ++     + VVME   GG L D ++ +    E   A V R  + A+   HS  V+H
Sbjct: 80  NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 138

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K +N   I    +  +K+TDFG
Sbjct: 139 RDIKSDN---ILLGMDGSVKLTDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 63.1 bits (153), Expect = 6e-11
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG--QPN 88
           ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L     P 
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNTRHPF 56

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   HS  V
Sbjct: 57  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 116

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RD+K EN      D +  +K+TDFG
Sbjct: 117 VYRDIKLENLML---DKDGHIKITDFG 140

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 62.9 bits (153), Expect = 6e-11
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 7/148 (4%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           ++LG+G +G  +     T   T   +A K + K   ++  ++    + E  I   +   P
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            IV+L  A +    +++++E   GG+LF  +  +G + E  A   L  I  A+   H  G
Sbjct: 61  FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           +++RDLKPEN   I  D    +K+TDFG
Sbjct: 121 IIYRDLKPEN---ILLDAQGHVKLTDFG 145

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 61.9 bits (150), Expect = 9e-11
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 29/159 (18%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG+G FG        +T   YACK + KK ++K    + M   E +I   ++  P IV L
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKK-RLKKKSGEKMALLEKEILEKVN-SPFIVNL 58

Query: 93  KSAHEDETAVHVVMELCQGGDL-------------FDRIIAKGYYSERDAAPVLRAIVNA 139
             A E +T + +VM L  GGDL              +R+I   +YS +    +L      
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVI---HYSAQITCGILH----- 110

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
               HSM +++RD+KPEN      DD    +++D G A+
Sbjct: 111 ---LHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAV 143

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 26/169 (15%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-I 89
           +++GRG FG   +    +T   YA K + K   +K AE     R E  +  L++G    I
Sbjct: 7   KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAET-ACFREERDV--LVNGDRRWI 63

Query: 90  VELKSAHEDETAVHVVMELCQGGDLF-------DRI---IAKGYYSERDAAPVLRAIVNA 139
             L  A +DE  +++VM+   GGDL        DR+   +A+ Y +E         +V A
Sbjct: 64  TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAE---------MVLA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
           ++  H +G +HRD+KP+N   +  D N  +++ DFGS L    +G   S
Sbjct: 115 IDSVHQLGYVHRDIKPDN---VLLDKNGHIRLADFGSCLRLLADGTVQS 160

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 22/165 (13%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY   R+LG+G FG    C   +T   YACK + KK ++K  + + M   E +I   ++ 
Sbjct: 4   HY---RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKRILEKVNS 59

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVC 143
           +  +V L  A+E + A+ +V+ +  GGDL   I   G   + E+      RAI  A  +C
Sbjct: 60  R-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQ------RAIFYAAELC 112

Query: 144 ------HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
                     +++RDLKPEN   I  DD   ++++D G A+   E
Sbjct: 113 CGLEDLQRERIVYRDLKPEN---ILLDDRGHIRISDLGLAVQIPE 154

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 17/169 (10%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM----AKKPKMKYAENDMMIRREIQIRRL 82
           Y F R++G+G +G   L    +    Y  K +    A + + K AE +  +  +++    
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK---- 57

Query: 83  LSGQPNIVELKSAHEDETA-VHVVMELCQGGDLFDRII-AKG-YYSERDAAPVLRAIVNA 139
               PNIV  + + E E   +++VM  C+GGDL+ ++   KG    E         I  A
Sbjct: 58  ---HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
           +   H   ++HRDLK +N  F++R +  ++KV D G A + E +   AS
Sbjct: 115 LQYLHEKHILHRDLKTQNV-FLTRTN--IIKVGDLGIARVLENQCDMAS 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM---MIRREIQIRRLL--SGQP 87
           +G G +G  Y   + +T    A K +    ++  +E  +    +R EI + + L     P
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKV----RVPLSEEGIPLSTLR-EIALLKQLESFEHP 61

Query: 88  NIVEL-----KSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERDAAPVLRAIVNA 139
           NIV L         + E  + +V E     DL     +    G         ++R ++  
Sbjct: 62  NIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGL-PPETIKDLMRQLLRG 119

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           V+  HS  ++HRDLKP+N   ++ D    +K+ DFG A ++  E
Sbjct: 120 VDFLHSHRIVHRDLKPQNI-LVTSDGQ--VKIADFGLARIYSFE 160

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 9/147 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-- 88
           +++GRG FG   L  +  T   YA K + +K  M   E    IR E   R +L    +  
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHVYAMK-ILRKADMLEKEQVGHIRAE---RDILVEADSLW 62

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V++  + +D+  ++++ME   GGD+   ++ K   +E +    +   V A++  H +G 
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF 122

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           +HRD+KP+N    S+     +K++DFG
Sbjct: 123 IHRDIKPDNLLLDSKGH---VKLSDFG 146

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           L+E F   D D +GT+S DEL+A L  +G  L+E ++ +++   D DG+G ID+ EF   
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 60.5 bits (146), Expect = 3e-10
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)

Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLL 83
           +++  G++LG+G FG  YLC +  T    A K +   P+      ++  +  EIQ+ + L
Sbjct: 2   INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL 61

Query: 84  SGQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
             +  IV+      D  E  + + ME   GG + D++ A G  +E       R I+  ++
Sbjct: 62  QHE-RIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMS 120

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             HS  ++HRD+K  N   I RD    +K+ DFG++
Sbjct: 121 YLHSNMIVHRDIKGAN---ILRDSAGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
           H  F + LG G FG   LC  +        +   K       E       REI+I R L 
Sbjct: 5   HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD 64

Query: 85  GQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIVNA 139
              NIV+ K   E     ++ ++ME    G L  R   + +  + +   +L     I   
Sbjct: 65  -HENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQICKG 121

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           ++   S   +HRDL   N   I  +   L+K++DFG A +  E
Sbjct: 122 MDYLGSQRYIHRDLAARN---ILVESEDLVKISDFGLAKVLPE 161

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQPNI 89
           +++G+G FG   L    +    YA K + KK  +K  E   +M  R + ++ +    P +
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--KHPFL 58

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V L  + +    ++ V++   GG+LF  +  +  + E  A      I +A+   HS+ ++
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV 118

Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
           +RDLKPEN   I  D    + +TDFG
Sbjct: 119 YRDLKPEN---ILLDSQGHIVLTDFG 141

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 61.4 bits (149), Expect = 5e-10
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 3/108 (2%)

Query: 74  RREIQIRRLLSGQPNIVELKSAHEDETA-VHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           RRE  +   L   PNIV L  + E     +  V E   G  L + + A G     +   +
Sbjct: 26  RRETALCARLY-HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRL 84

Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALL 179
           +  +++A+   H+ G++HRDLKP+N            KV DFG   LL
Sbjct: 85  MLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL 132

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQPNI 89
           ++LG+G FG   L     T+  YA K + K   +   ++D+     E ++  L    P +
Sbjct: 1   KVLGKGSFGKVLLAELKGTDELYAVKVLKK--DVILQDDDVECTMTEKRVLALAGKHPFL 58

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
            +L S  + +  +  VME   GGDL   I   G + E  A      IV  +   H  G++
Sbjct: 59  TQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGII 118

Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
           +RDLK +N   +  D    +K+ DFG
Sbjct: 119 YRDLKLDN---VLLDSEGHIKIADFG 141

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 59.1 bits (144), Expect = 8e-10
 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 19/157 (12%)

Query: 31  RMLGRGRFGVTYLCT---ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           + LG G FG  Y      ++      A K++ K+   +    D +  +E ++ + L G P
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTL-KEDASEEERKDFL--KEARVMKKL-GHP 56

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVC- 143
           N+V L     +E  +++V+E  +GGDL D +              L     +  A+ +  
Sbjct: 57  NVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116

Query: 144 -----HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                 S   +HRDL   N C +  D     K++DFG
Sbjct: 117 GMEYLASKKFVHRDLAARN-CLVGEDLVV--KISDFG 150

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 59.2 bits (143), Expect = 8e-10
 Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 18/152 (11%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQP 87
           ++G G +GV   C    T    A K      K K +E +  ++    RE+++ R L  Q 
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIK------KFKDSEENEEVKETTLRELKMLRTLK-QE 60

Query: 88  NIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
           NIVELK A      +++V E  +    +L + +   G   E+  + + + ++ A++ CH 
Sbjct: 61  NIVELKEAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQ-LIKAIHWCHK 118

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             ++HRD+KPEN   IS +D  +LK+ DFG A
Sbjct: 119 NDIVHRDIKPENL-LISHND--VLKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 58.9 bits (143), Expect = 8e-10
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 19/150 (12%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL----LSGQPN 88
           LG G  GV        T    A K++         E +  I+++I +R L        P 
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTI-------RLEINEAIQKQI-LRELDILHKCNSPY 60

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRII--AKGYYSERDAAPVLRAIVNAVNVCHS- 145
           IV    A  +   + + ME   GG L D+I+   +G   ER    +  A++  +   H  
Sbjct: 61  IVGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRD+KP N    SR     +K+ DFG
Sbjct: 120 HKIIHRDVKPSNILVNSRGQ---IKLCDFG 146

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 80

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 81  EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIH 139

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 140 RDIKSDSI-LLTHDGR--VKLSDFG 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-I 89
           +++GRG FG   +     T   YA K + K   +K AE     R E  +  L++G    I
Sbjct: 7   KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAET-ACFREERNV--LVNGDCQWI 63

Query: 90  VELKSAHEDETAVHVVMELCQGGDLF-------DRI---IAKGYYSERDAAPVLRAIVNA 139
             L  A +DE  +++VM+   GGDL        DR+   +A+ Y +E         +V A
Sbjct: 64  TTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAE---------MVLA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           ++  H +  +HRD+KP+N   +  D N  +++ DFGS L   ++G
Sbjct: 115 IHSIHQLHYVHRDIKPDN---VLLDMNGHIRLADFGSCLKMNQDG 156

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 58.8 bits (142), Expect = 2e-09
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 14/165 (8%)

Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMP-YACKSMAKKPKMKYAENDMMIRREIQ 78
           YED    ++F R LG G FG   L T  + + P  A K   K   +K  + D +      
Sbjct: 29  YED----FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSE--- 81

Query: 79  IRRLLS--GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
            R++L+    P  V L  + +DE+ +++V+E   GG+ F  +     +           I
Sbjct: 82  -RKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQI 140

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           V       S+ +++RDLKPEN      D +  +K+TDFG A + +
Sbjct: 141 VLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVD 182

Length = 340

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + TE  T    A K M   K+ + +   N+++I R+           N+V
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-------HENVV 82

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           ++ +++     + VVME  +GG L D I+     +E   A V  +++ A++  H+ GV+H
Sbjct: 83  DMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 141

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++    S   +  +K++DFG
Sbjct: 142 RDIKSDSILLTS---DGRIKLSDFG 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 14/151 (9%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-PNIVE 91
           LG+G +G  Y     S N  YA K +     M   E +  +    +IR L S   PNI+ 
Sbjct: 8   LGKGSYGSVYKVKRLSDNQFYALKEV-DLGSMSQKEREDAVN---EIRILASVNHPNIIS 63

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-----YSERDAAPVLRAIVNAVNVCHSM 146
            K A  D   + +VME    GDL  + I+K         E++   +   ++  +   H  
Sbjct: 64  YKEAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ 122

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            ++HRDLK  N   I    N L+K+ D G +
Sbjct: 123 KILHRDLKSAN---ILLVANDLVKIGDLGIS 150

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 18/155 (11%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV Y      T    A K      K++    +  +     REI + + L   PN
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMK------KIRLESEEEGVPSTAIREISLLKELQ-HPN 60

Query: 89  IVELKSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
           IV L+     E+ ++++ E     DL    D +    Y         L  I+  +  CHS
Sbjct: 61  IVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS 119

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             V+HRDLKP+N      D+  ++K+ DFG A  F
Sbjct: 120 RRVLHRDLKPQNLLI---DNKGVIKLADFGLARAF 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 10/163 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQPNI 89
           +++G+G FG   L         YA K + KK  +   E   +M  R + ++ +    P +
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV--KHPFL 58

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V L  + +    ++ V++   GG+LF  +  +  + E  A      I +A+   HS+ ++
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIV 118

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           +RDLKPEN   I  D    + +TDFG      +EG   SD T+
Sbjct: 119 YRDLKPEN---ILLDSQGHVVLTDFGLC----KEGIAQSDTTT 154

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A K M   ++PK +   N++++ RE       +
Sbjct: 21  YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE-------N 73

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A++  H
Sbjct: 74  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDFLH 132

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 133 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + +G G FG  YL    S +     K +    KM   E +   +  I + ++    
Sbjct: 2   YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMPVKEKEASKKEVILLAKM--KH 58

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKG-YYSERDAAPVLRAIVNAVNVCH 144
           PNIV   ++ ++   + +VME C GGDL  RI   +G  +SE         I   +   H
Sbjct: 59  PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              ++HRD+K +N  F+S+ +  + K+ DFG A
Sbjct: 119 DRKILHRDIKSQNI-FLSK-NGMVAKLGDFGIA 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G FG  Y  T + TN   A K M+   K    E    I +E++  + L   PN +E 
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN-EKWQDIIKEVKFLQQLK-HPNTIEY 86

Query: 93  KSAHEDETAVHVVMELCQG--GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           K  +  E    +VME C G   DL +  + K    E + A +    +  +   HS  ++H
Sbjct: 87  KGCYLKEHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 144

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
           RD+K  N   I   +   +K+ DFGSA
Sbjct: 145 RDIKAGN---ILLTEPGQVKLADFGSA 168

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 57.4 bits (138), Expect = 4e-09
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 26/165 (15%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-I 89
           +++GRG FG   +    + +  +A K + K   +K AE     R E  +  L++G    I
Sbjct: 7   KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET-ACFREERDV--LVNGDNQWI 63

Query: 90  VELKSAHEDETAVHVVMELCQGGDLF-------DRI---IAKGYYSERDAAPVLRAIVNA 139
             L  A +DE  +++VM+   GGDL        DR+   +A+ Y +E         +V A
Sbjct: 64  TTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAE---------MVIA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           ++  H +  +HRD+KP+N   I  D N  +++ DFGS L   E+G
Sbjct: 115 IDSVHQLHYVHRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDG 156

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE------IQIR 80
           ++F  +LG+G FG   L     T+  YA K + K         D++I+ +      ++ R
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK---------DVIIQDDDVECTMVEKR 52

Query: 81  RL-LSGQPN-IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
            L L G+P  + +L S  +    ++ VME   GGDL   I   G + E  A      I  
Sbjct: 53  VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAI 112

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +   HS G+++RDLK +N   +  D    +K+ DFG
Sbjct: 113 GLFFLHSKGIIYRDLKLDN---VMLDAEGHIKIADFG 146

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 33/162 (20%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV Y   +  T    A K      K++    D  +     REI + + L+  PN
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALK------KIRLETEDEGVPSTAIREISLLKELN-HPN 59

Query: 89  IVELKSAHEDETAVHVVMELCQ----------GGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           IV L      E  +++V E                  D  + K Y  +         ++ 
Sbjct: 60  IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQ---------LLQ 110

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            +  CHS  V+HRDLKP+N   I R+    LK+ DFG A  F
Sbjct: 111 GIAYCHSHRVLHRDLKPQNL-LIDREGA--LKLADFGLARAF 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 20/159 (12%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           ++ + ++E F   DTD +GT+   EL+  +  +G    + ++KQ++   D DG+G ID+ 
Sbjct: 14  DQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFE 73

Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           EF    T +  + +  E + KAF+ FD D +G    + +       + V       AK+ 
Sbjct: 74  EFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNL-------KRV-------AKEL 119

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           G   T +      L++++ + D +G+G I   EF  +M 
Sbjct: 120 GETITDE-----ELQEMIDEADRNGDGEISEEEFYRIMK 153

Length = 158

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 56.2 bits (135), Expect = 7e-09
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 12/157 (7%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P ED    +   + +G G +G  Y     +T    A K +  +P     E+  ++++EI 
Sbjct: 7   PQED----FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEII 58

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           + +      NIV    ++     + + ME C GG L D     G  SE   A V R  + 
Sbjct: 59  MMKDCK-HSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQ 117

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +   HS G MHRD+K  N   I   DN  +K+ DFG
Sbjct: 118 GLYYLHSKGKMHRDIKGAN---ILLTDNGHVKLADFG 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 56.7 bits (137), Expect = 7e-09
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 12/156 (7%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y    ++G+G +GV     +  T    A K +      ++  +   I REI++ RLL   
Sbjct: 2   YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--NDVFEHVSDATRILREIKLLRLLR-H 58

Query: 87  PNIVELK-----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
           P+IVE+K      +  +   ++VV EL    DL   I A    +       L  ++ A+ 
Sbjct: 59  PDIVEIKHIMLPPSRREFKDIYVVFEL-MESDLHQVIKANDDLTPEHHQFFLYQLLRALK 117

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             H+  V HRDLKP+N   I  + +  LK+ DFG A
Sbjct: 118 YIHTANVFHRDLKPKN---ILANADCKLKICDFGLA 150

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACK----------SMAKKPKMKYAENDMMIRREIQI 79
           G ++G G FG  YL    S+    A K          S  +K  M  A     + REI +
Sbjct: 5   GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDA-----LAREIAL 59

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
            + L    NIV+   +  D   +++ +E   GG +   +   G + E      +R I+  
Sbjct: 60  LKELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKG 118

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +N  H+ G++HRD+K  N   I  D+   +K++DFG
Sbjct: 119 LNYLHNRGIIHRDIKGAN---ILVDNKGGIKISDFG 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 56.3 bits (135), Expect = 9e-09
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL--SGQPN 88
           ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L  S  P 
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVLQNSRHPF 56

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MG 147
           +  LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A++  HS   
Sbjct: 57  LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 116

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           V++RDLK EN      D +  +K+TDFG
Sbjct: 117 VVYRDLKLENLML---DKDGHIKITDFG 141

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           RE++I   +    NI+ L   + +   +++VM++    DL   +  K   +E     +L 
Sbjct: 69  RELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILL 126

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            I+N +NV H    MHRDL P N  FI  +   + K+ DFG A
Sbjct: 127 QILNGLNVLHKWYFMHRDLSPANI-FI--NSKGICKIADFGLA 166

Length = 335

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG--QPN 88
           ++LG+G FG   L  E ++   YA K + K+  +   E    +   +   R+L     P 
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDE----VAHTLTESRVLKNTRHPF 56

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +  LK + + +  +  VME   GG+LF  +  +  +SE         IV+A++  HS  +
Sbjct: 57  LTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI 116

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RDLK EN      D +  +K+TDFG
Sbjct: 117 VYRDLKLENLML---DKDGHIKITDFG 140

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 10/152 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
           ++F  +LG+G FG   L     T+  YA K + K   ++    E  M+ +R +     LS
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLA----LS 57

Query: 85  GQPN-IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           G+P  + +L S  +    ++ VME   GGDL  +I   G + E  A      I   +   
Sbjct: 58  GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFL 117

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           HS G+++RDLK +N   +  D    +K+ DFG
Sbjct: 118 HSKGIIYRDLKLDN---VMLDSEGHIKIADFG 146

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T   YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 1   RVIGRGSYAKVLLVRLKKTERIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 59

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 60  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 119

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N      D    +K+TD+G      +EG    D TS
Sbjct: 120 RDLKLDNVLL---DSEGHIKLTDYGMC----KEGLRPGDTTS 154

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  +  E  +    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-------HQNVV 81

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+  ++     + V+ME  QGG L D I+++   +E   A V  +++ A+   HS GV+H
Sbjct: 82  EMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIH 140

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 141 RDIKSDSI-LLTLDGR--VKLSDFG 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 12/149 (8%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND----MMIRREIQIRRLLSGQ 86
           ++LG+G FG   L     TN  +A K++ K   +   E+D     M+ R +    L    
Sbjct: 1   KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL---EDDDVECTMVERRVLA--LAWEH 55

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P +  L    + +  +  VME   GGDL   I + G + E  A      I+  +   H  
Sbjct: 56  PFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK 115

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           G+++RDLK +N   +  D +  +K+ DFG
Sbjct: 116 GIIYRDLKLDN---VLLDKDGHIKIADFG 141

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 17/154 (11%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIR---RLLSGQPN 88
           LG+G FG    C   +T   YACK + KK  K +      M+ + I  +   R       
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRF------ 54

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRII----AKGYYSERDAAPVLRAIVNAVNVCH 144
           IV L  A + +T + +VM +  GGDL   I         + E  A      I++ +   H
Sbjct: 55  IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH 114

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
              +++RDLKPEN      D++  ++++D G A+
Sbjct: 115 QRRIIYRDLKPENVLL---DNDGNVRISDLGLAV 145

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSGQPNIV 90
           +G G +G  Y      T    A K +    +M+  +    I   REI++ + L   PNIV
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKI----RMENEKEGFPITAIREIKLLQKLR-HPNIV 61

Query: 91  ELKS--AHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVNAVNVCHSM 146
            LK     + + ++++V E     DL   ++       +E      ++ ++  +   HS 
Sbjct: 62  RLKEIVTSKGKGSIYMVFEYMDH-DL-TGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN 119

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           G++HRD+K  N   I  +++ +LK+ DFG A  + +  
Sbjct: 120 GILHRDIKGSN---ILINNDGVLKLADFGLARPYTKRN 154

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 54.7 bits (131), Expect = 2e-08
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  +   + +T    A K  ++ K+PK +   N++++ +E++      
Sbjct: 21  YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK------ 74

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    +      + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 75  -NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLH 132

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +  V+HRD+K +N           +K+TDFG
Sbjct: 133 ANQVIHRDIKSDNVLLGMDGS---VKLTDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 5/149 (3%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQPN 88
           G +LG G FG  Y          +A K ++     +   E    + +EI +   L   PN
Sbjct: 5   GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           IV+      +E  +++ +EL  GG L   +   G + E       R I+  +   H    
Sbjct: 64  IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N   I  D N ++K+ DFG A
Sbjct: 124 VHRDIKGAN---ILVDTNGVVKLADFGMA 149

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKS--MAKKPKMKYAENDMMIRREIQIRRLLS--GQ 86
             +G+G FG  Y       N   A K+      P +K        R+ +Q   +L     
Sbjct: 1   EKIGKGNFGDVYKGVLK-GNTEVAVKTCRSTLPPDLK--------RKFLQEAEILKQYDH 51

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV+L      +  +++VMEL  GG L   +  K      +   V + +  +++    M
Sbjct: 52  PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGM 106

Query: 147 ------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
                   +HRDL   N C +   +N +LK++DFG +   EEEGG 
Sbjct: 107 EYLESKNCIHRDLAARN-CLV--GENNVLKISDFGMSR--EEEGGI 147

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 18/156 (11%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN--DMMIRREIQIRRLLSG--QPN 88
           LG G FG  Y      T +     + AK  +++  E   D M+  EI I   LS    PN
Sbjct: 13  LGDGAFGKVYKAQHKETGL----FAAAKIIQIESEEELEDFMV--EIDI---LSECKHPN 63

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMG 147
           IV L  A+  E  + +++E C GG L   ++      +E     V R ++ A+N  HS  
Sbjct: 64  IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK 123

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG-SALLFEE 182
           V+HRDLK  N   ++ D +  +K+ DFG SA     
Sbjct: 124 VIHRDLKAGNI-LLTLDGD--VKLADFGVSAKNKST 156

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 25/64 (39%), Positives = 39/64 (60%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           +KE F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G I+Y EF   
Sbjct: 86  IKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKM 145

Query: 286 TIQR 289
            + +
Sbjct: 146 MMSK 149

Length = 149

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L      +  YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 1   RVIGRGSYAKVLLVRLKKNDQIYAMK-VVKKELVHDDEDIDWVQTEKHVFEQASSNPFLV 59

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  +  + + +V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 60  GLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIY 119

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N      D +  +K+TD+G      +EG    D TS
Sbjct: 120 RDLKLDNVLL---DADGHIKLTDYGMC----KEGLGPGDTTS 154

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 53.7 bits (129), Expect = 6e-08
 Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 16/167 (9%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           I G  +E +   Y   + +G G FG+     +  T    A K + K              
Sbjct: 1   IFGTVFE-ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKP--FSTPVLAKRTY 57

Query: 75  REIQIRRLLSGQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
           RE+++ + L  + NI+ L     S  ED   ++ V EL  G DL  R++      ++   
Sbjct: 58  RELKLLKHLRHE-NIISLSDIFISPLED---IYFVTEL-LGTDL-HRLLTSRPLEKQFIQ 111

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             L  I+  +   HS GV+HRDLKP N   I  ++N  LK+ DFG A
Sbjct: 112 YFLYQILRGLKYVHSAGVVHRDLKPSN---ILINENCDLKICDFGLA 155

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 53.6 bits (129), Expect = 6e-08
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 21/153 (13%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREIQIRRLLSGQPNI 89
           LG G  G    C   +T M +A K++   P      N  +   I RE++I +     P I
Sbjct: 9   LGEGAGGSVTKCRLKNTGMIFALKTITTDP------NPDLQKQILRELEINKSCK-SPYI 61

Query: 90  VELKSAHEDE--TAVHVVMELCQGGDLFDRIIAK-----GYYSERDAAPVLRAIVNAVNV 142
           V+   A  DE  +++ + ME C+GG L D I  K     G   E+    +  +++  ++ 
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            HS  ++HRD+KP N   I       +K+ DFG
Sbjct: 121 LHSRKIIHRDIKPSN---ILLTRKGQVKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 53.5 bits (129), Expect = 7e-08
 Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 33/158 (20%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI----RRLL----- 83
           LGRG FG   L     T   YA K++ K         D++ R E++     +R+      
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKK--------GDIIARDEVESLMCEKRIFETANS 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P +V L +  + E  V  VME   GGDL    I    +SE       RA+  A  V 
Sbjct: 59  ERHPFLVNLFACFQTEDHVCFVMEYAAGGDLM-MHIHTDVFSEP------RAVFYAACVV 111

Query: 144 ------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                 H   +++RDLK +N   +  D    +K+ DFG
Sbjct: 112 LGLQYLHENKIVYRDLKLDN---LLLDTEGFVKIADFG 146

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 7e-08
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +G  Y   + +T    A K +  +P   +      I++EI + +     PNIV  
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEI----IQQEISMLKECR-HPNIVAY 65

Query: 93  KSAHEDETAVHVVMELCQGG---DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
             ++     + +VME C GG   D++     +G  SE   A V R  +  +   H  G +
Sbjct: 66  FGSYLRRDKLWIVMEYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETGKI 123

Query: 150 HRDLKPENFCFISRDDNALLKVTDFG-SALLFE 181
           HRD+K  N       D   +K+ DFG SA L  
Sbjct: 124 HRDIKGANILLTEDGD---VKLADFGVSAQLTA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.6 bits (128), Expect = 7e-08
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R +G G FG  Y   +  TN   A K M+   K    +   +I+    ++R+    PN +
Sbjct: 31  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI--KHPNSI 88

Query: 91  ELKSAHEDETAVHVVMELCQG--GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           E K  +  E    +VME C G   DL +  + K    E + A +    +  +   HS  +
Sbjct: 89  EYKGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNM 146

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N   I   +   +K+ DFGSA
Sbjct: 147 IHRDIKAGN---ILLTEPGQVKLADFGSA 172

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 53.2 bits (128), Expect = 8e-08
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 35/160 (21%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI----RRLLS-- 84
           +++  G +G  YL     T   +A K + K         ++++R +IQ     R +L+  
Sbjct: 7   KLISNGAYGAVYLVRHKETRQRFAMKKINK--------QNLILRNQIQQVFVERDILTFA 58

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGD---LFDRI------IAKGYYSERDAAPVLRA 135
             P +V +  + E +  + +VME  +GGD   L   I      +A+ Y++E         
Sbjct: 59  ENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAE--------- 109

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            V A+   H+ G++HRDLKP+N    S      +K+TDFG
Sbjct: 110 TVLALEYLHNYGIVHRDLKPDNLLITSMGH---IKLTDFG 146

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 53.4 bits (128), Expect = 8e-08
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 5/143 (3%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG      +  T   YA K++ K   +  +E    +     + ++    P IV L
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV--NCPFIVPL 58

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
           K + +    +++V+    GG+LF  +  +G +    A      ++ A+   H   V++RD
Sbjct: 59  KFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRD 118

Query: 153 LKPENFCFISRDDNALLKVTDFG 175
           LKPEN   I  D    + + DFG
Sbjct: 119 LKPEN---ILLDYQGHIALCDFG 138

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 53.4 bits (129), Expect = 8e-08
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 19/160 (11%)

Query: 34  GRGRFGVTYLC--TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           GRG +G  Y            YA K   K  K +Y        REI + R L    N+V 
Sbjct: 9   GRGTYGRVYKAKRKNGKDGKEYAIKKF-KGDKEQYTGISQSACREIALLRELK-HENVVS 66

Query: 92  LKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV--------NAVN 141
           L     +     V+++ +  +  DL+ +II   ++ +     +  ++V        N V+
Sbjct: 67  LVEVFLEHADKSVYLLFDYAEH-DLW-QIIK--FHRQAKRVSIPPSMVKSLLWQILNGVH 122

Query: 142 VCHSMGVMHRDLKPEN-FCFISRDDNALLKVTDFGSALLF 180
             HS  V+HRDLKP N        +  ++K+ D G A LF
Sbjct: 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R +G G FG  Y   +   +   A K M+   K +  E    I +E++  + L   PN +
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLR-HPNTI 78

Query: 91  ELKSAHEDETAVHVVMELCQG--GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +  +  E    +VME C G   DL +  + K    E + A V    +  +   HS  +
Sbjct: 79  QYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N   I   +  L+K+ DFGSA
Sbjct: 137 IHRDVKAGN---ILLSEPGLVKLGDFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           ++LG+G FG   L     T+  YA K + K   ++  + D  +  E +I  L +  P + 
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMT-EKRILALAAKHPFLT 59

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L    + +  +  VME   GGDL  +I     + E  +      +  A+   H  GV++
Sbjct: 60  ALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIY 119

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLK +N   I  D     K+ DFG
Sbjct: 120 RDLKLDN---ILLDAEGHCKLADFG 141

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 10/152 (6%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM------IRREIQIRRLL 83
           G ++G+G +G  YL    +T    A K +     +    +         +R EI+  + L
Sbjct: 6   GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
               NIV+       E  + + +E   GG +   +   G + E+        ++  +   
Sbjct: 66  D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           HS G++HRDLK +N   +  D + + K++DFG
Sbjct: 125 HSKGILHRDLKADN---LLVDADGICKISDFG 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 36/160 (22%)

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKA 336
           T+ T   IQ         L +AFQ FD+D+ G    +E   ++ S               
Sbjct: 12  TQLTEEQIQE--------LKEAFQLFDRDSDGLIDRNELGKILRS--------------- 48

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQY 395
              G   ++       + KL  + D  GN  +DF EF+ +M+   K  +  E L +AF+ 
Sbjct: 49  --LGFNPSEAE-----INKLFEEID-AGNETVDFPEFLTVMSVKLKRGDKEEELREAFKL 100

Query: 396 LDKNSDQFITVNELETAFKE-NNMGDDATIKEIISEVGRD 434
            DK+ D +I++ EL    K       D  +++++ E   D
Sbjct: 101 FDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDED 140

Length = 160

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 8/151 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + +G G +G  Y      T    A K +    K++  ++  +I++EI + +     
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKII----KLEPGDDFSLIQQEIFMVKECK-H 65

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            NIV    ++     + + ME C GG L D     G  SE   A V R  +  +   HS 
Sbjct: 66  CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           G MHRD+K  N   I   DN  +K+ DFG A
Sbjct: 126 GKMHRDIKGAN---ILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG+G +G  Y      T +  A K +  + ++  ++ + +I     + + +S  P IV+ 
Sbjct: 9   LGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDILHKAVS--PYIVDF 64

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV-----NVCHSMG 147
             A   E AV++ ME    G L D++ A G  +E     VLR I  AV      +     
Sbjct: 65  YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           ++HRD+KP N   +  + N  +K+ DFG
Sbjct: 124 IIHRDVKPTN---VLVNGNGQVKLCDFG 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 22/160 (13%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLS--GQPN 88
           +GRG FG  +     + N P A KS  +   P +K         + +Q  R+L     PN
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK--------AKFLQEARILKQYSHPN 54

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA---VNVCHS 145
           IV L      +  +++VMEL QGGD    +  +G         +++ + NA   +    S
Sbjct: 55  IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLES 112

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
              +HRDL   N C ++  +  +LK++DFG +   EEE G
Sbjct: 113 KHCIHRDLAARN-CLVTEKN--VLKISDFGMSR--EEEDG 147

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T   YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 1   RVIGRGSYAKVLLVELKKTRRIYAMK-VIKKELVNDDEDIDWVQTEKHVFETASNHPFLV 59

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 60  GLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIY 119

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N      D    +K+TD+G      +EG    D TS
Sbjct: 120 RDLKLDNVLL---DAEGHIKLTDYGMC----KEGIRPGDTTS 154

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 7/149 (4%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 64

Query: 93  KSAHEDETAVHVVME-LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                 E  +++V E L Q    F                 L  ++  +  CHS  V+HR
Sbjct: 65  LDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124

Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLF 180
           DLKP+N      +    +K+ DFG A  F
Sbjct: 125 DLKPQNLLI---NTEGAIKLADFGLARAF 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 51.2 bits (122), Expect = 5e-07
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
           ++F  +LG+G FG   L     T+  YA K + K   ++    E  M+ +R   +  L  
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKR---VLALQD 58

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +   H
Sbjct: 59  KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLH 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             G+++RDLK +N   +  D    +K+ DFG
Sbjct: 119 RRGIIYRDLKLDN---VMLDSEGHIKIADFG 146

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 51.1 bits (122), Expect = 5e-07
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG   L     +   YA K + KK  +   ++      E +I  L    P + 
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVK-VLKKDVILQDDDVECTMTEKRILSLARNHPFLT 59

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           +L    +    +  VME   GGDL   I     + E  A      I +A+   H  G+++
Sbjct: 60  QLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIY 119

Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLK +N   +  D     K+ DFG
Sbjct: 120 RDLKLDN---VLLDHEGHCKLADFG 141

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 14/150 (9%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQP 87
           ++G G +G+   C    T    A K      K   +E+D M++    REI++ + L  + 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIK------KFLESEDDKMVKKIAMREIRMLKQLRHE- 60

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           N+V L      +  +++V E      L D         E      L  I+  +  CHS  
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++HRD+KPEN   +S+  + ++K+ DFG A
Sbjct: 121 IIHRDIKPENI-LVSQ--SGVVKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQI 79
           DV   Y     +G G +GV     +  +      K   KK    +    +  R  RE++I
Sbjct: 2   DVGSRYKPIENIGSGAYGVVCSAIDTRSG----KKVAIKKIPHAFDVPTLAKRTLRELKI 57

Query: 80  RRLLSGQPNIVE----LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
            R      NI+     L+    D   V+VVM+L    DL   I +    +E      L  
Sbjct: 58  LRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDLHHIIHSDQPLTEEHIRYFLYQ 115

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++  +   HS  V+HRDLKP N      +++  L++ DFG A
Sbjct: 116 LLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMA 154

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 50.7 bits (121), Expect = 6e-07
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLSGQPN 88
           +MLG+G FG  +L     TN  +A K++ K   +     E  M+ +R   +  L    P 
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKR---VLSLAWEHPF 57

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +  L    + +  +  VME   GGDL   I +   +    A      I+  +   HS G+
Sbjct: 58  LTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI 117

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RDLK +N   I  D +  +K+ DFG
Sbjct: 118 VYRDLKLDN---ILLDTDGHIKIADFG 141

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 50.2 bits (120), Expect = 7e-07
 Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 26/168 (15%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQI 79
           M  Y     +G G +GV Y   +  TN   A K      K++  + D  +     REI +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALK------KIRLEQEDEGVPSTAIREISL 54

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI--- 136
            + +    NIV L+     E  +++V E        D  + K   S  D A   R I   
Sbjct: 55  LKEMQ-HGNIVRLQDVVHSEKRLYLVFEY------LDLDLKKHMDSSPDFAKNPRLIKTY 107

Query: 137 ----VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
               +  +  CHS  V+HRDLKP+N   I R  NA LK+ DFG A  F
Sbjct: 108 LYQILRGIAYCHSHRVLHRDLKPQNL-LIDRRTNA-LKLADFGLARAF 153

Length = 294

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 50.0 bits (119), Expect = 8e-07
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 11/158 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRLLSGQPNI 89
           + +GRG+F   Y  T      P A K +     M   A  D +  +EI + + L+  PN+
Sbjct: 8   KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCV--KEIDLLKQLN-HPNV 64

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRII----AKGYYSERDAAPVLRAIVNAVNVCHS 145
           ++   +  ++  +++V+EL   GDL   I      K    ER        + +AV   HS
Sbjct: 65  IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS 124

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             VMHRD+KP N  FI+     ++K+ D G    F  +
Sbjct: 125 RRVMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSK 159

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)

Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMI 73
           LG  Y D+       R LG G  G+ +   ++  +   A K   +     +K+A      
Sbjct: 3   LGSRYMDL-------RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHA------ 49

Query: 74  RREIQIRRLL--------------SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII 119
            REI+I R L              SG     ++ S  E  + V++V E  +  DL   ++
Sbjct: 50  LREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMET-DL-ANVL 106

Query: 120 AKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +G  SE  A   +  ++  +   HS  V+HRDLKP N  FI+ +D  +LK+ DFG A
Sbjct: 107 EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANV-FINTED-LVLKIGDFGLA 162

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 28/159 (17%)

Query: 36  GRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND----MMIRREIQIRRLLSGQ-PNIV 90
           G +GV Y   +  T    A K      K+K  +      +   REI I  LL  Q PNIV
Sbjct: 16  GTYGVVYRARDKKTGEIVALK------KLKMEKEKEGFPITSLREINI--LLKLQHPNIV 67

Query: 91  ELK-----SAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
            +K     S  +    +++VME  +     L + +  K  + + +   ++  +++ V   
Sbjct: 68  TVKEVVVGSNLDK---IYMVMEYVEHDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHL 122

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           H   ++HRDLK  N    +R    +LK+ DFG A  +  
Sbjct: 123 HDNWILHRDLKTSNLLLNNR---GILKICDFGLAREYGS 158

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 23/172 (13%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKS------MAKKPKMKYAENDMMIRREIQIR 80
           +   + +G+G+F V Y           A K       M  K     A  D +  +EI + 
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK-----ARQDCL--KEIDLL 56

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-----KGYYSERDAAPVLRA 135
           + L   PN+++  ++  +   +++V+EL   GDL  R+I      K    ER        
Sbjct: 57  KQLD-HPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQ 114

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
           + +A+   HS  +MHRD+KP N  FI+     ++K+ D G    F  +   A
Sbjct: 115 LCSALEHMHSKRIMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAA 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 8/147 (5%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLSGQPN 88
           ++LG+G FG   L         +A K++ K   +     E  M+ +R   +  L    P 
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKR---VLALAWENPF 57

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +  L    + +  +  VME   GGDL   I  KG +    A      IV  +   HS G+
Sbjct: 58  LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI 117

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RDLK +N   +  D +  +K+ DFG
Sbjct: 118 IYRDLKLDN---VMLDRDGHIKIADFG 141

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 232 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQ----LMEAADMDGNGAIDYTEFTAA 285
            +D D +G +  +ELR  L  +G  LT+ +V++         D DG+G I + EF  A
Sbjct: 2   LLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59

Length = 60

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
           Y   + LG+G FG  YL  +         K + + P  +   N+ +   +E Q+   L  
Sbjct: 2   YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD- 60

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI----IAKGYYSERDAAPVLRAIVNAVN 141
            P IV+  ++  +  A  ++ E C+G DL  ++          SE         ++  V+
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             H   ++HRDLK +N  F+    N LLK+ DFG + L 
Sbjct: 121 YMHQRRILHRDLKAKNI-FLK---NNLLKIGDFGVSRLL 155

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 36  GRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA 95
           G+FG   +     T   +  K +  K    +         E  + +L+   PN ++L  +
Sbjct: 27  GKFGKVSVLKHKPTQKLFVQKIIKAK---NFNAI------EPMVHQLMKDNPNFIKLYYS 77

Query: 96  HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKP 155
                   ++M+  + GDLFD +  +G  SE +   ++R +V A+N  H   ++H D+K 
Sbjct: 78  VTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKL 137

Query: 156 EN-FCFISRDDNALLKVTDFG 175
           EN     ++D    + + D+G
Sbjct: 138 ENVLYDRAKDR---IYLCDYG 155

Length = 267

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
           +G+G FG  Y   +N T    A K +     ++ AE+++  I++EI +       P I  
Sbjct: 12  IGKGSFGEVYKGIDNRTKEVVAIKII----DLEEAEDEIEDIQQEITVLSQCD-SPYITR 66

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
              ++   T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HR
Sbjct: 67  YYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHR 125

Query: 152 DLKPENFCFISRDDNALLKVTDFGSA 177
           D+K  N     + D   +K+ DFG A
Sbjct: 126 DIKAANVLLSEQGD---VKLADFGVA 148

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
           +G+G FG  +   +N T    A K +     ++ AE+++  I++EI +       P + +
Sbjct: 12  IGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITVLSQCD-SPYVTK 66

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
              ++  +T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HR
Sbjct: 67  YYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHR 125

Query: 152 DLKPENFCFISRDDNALLKVTDFGSA 177
           D+K  N       ++  +K+ DFG A
Sbjct: 126 DIKAANVLL---SEHGEVKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 15/148 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G  G  Y      T    A K M    +    E +  I  ++ +       P IV+ 
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQM---RRTGNKEENKRILMDLDVVLKSHDCPYIVKC 79

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRII--AKGYYSERDAAPVLRAIVNAVN---VCHSMG 147
                 ++ V + MEL       D+++   +G   E     +  AIV A++     H  G
Sbjct: 80  YGYFITDSDVFICMELM--STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--G 135

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           V+HRD+KP N      D +  +K+ DFG
Sbjct: 136 VIHRDVKPSNILL---DASGNVKLCDFG 160

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRL 82
           + ++   + +GRG+F   Y  T     +P A K +     M   A  D +  +EI + + 
Sbjct: 1   LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQ 58

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLRAIV 137
           L+  PN+++  ++  ++  +++V+EL   GDL  R+I      K    E+        + 
Sbjct: 59  LN-HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLC 116

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           +A+   HS  VMHRD+KP N  FI+     ++K+ D G    F  +
Sbjct: 117 SALEHMHSRRVMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSK 159

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           E  +  Y   + +G GRFG  +L     T   +  K+++ +   +  ++ ++I  E+ + 
Sbjct: 9   ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVI--EVNVM 66

Query: 81  RLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAKGY-----YSERDAAPVL 133
           R L    NIV    +  ++    ++++ME C  GDL  R I K Y       E     + 
Sbjct: 67  RELK-HKNIVRYIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDIT 124

Query: 134 RAIVNAVNVCHSMG-------VMHRDLKPENFCFISRDDNALLKVT 172
           R +++A+  CH++        V+HRDLKP+N  F+S     + K+T
Sbjct: 125 RQLLHALAYCHNLKDGPNGERVLHRDLKPQNI-FLSTGIRHIGKIT 169

Length = 1021

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 36/186 (19%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-- 72
            L K   +V   Y     +G G +G               C +   K   K A   +   
Sbjct: 5   ELNKTVWEVPDRYQNLSPVGSGAYGQV-------------CSAFDTKTGRKVAIKKLSRP 51

Query: 73  ---------IRREIQIRRLLSGQPNIVEL------KSAHEDETAVHVVMELCQGGDLFDR 117
                      RE+++ + +    N++ L       S+ ED   V++V  L  G DL + 
Sbjct: 52  FQSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NN 108

Query: 118 IIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           I+     S+     ++  I+  +   HS G++HRDLKP N   I+ +++  LK+ DFG A
Sbjct: 109 IVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSN---IAVNEDCELKILDFGLA 165

Query: 178 LLFEEE 183
              ++E
Sbjct: 166 RHTDDE 171

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV-- 132
           REI + + L    NIV L      E  + +V E     DL   +   G     D   V  
Sbjct: 47  REISLMKELK-HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKS 104

Query: 133 -LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
               ++  +  CH   V+HRDLKP+N     R +   LK+ DFG A  F
Sbjct: 105 FTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE---LKLADFGLARAF 150

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ LM    K  ++ E +++AF+  D++ + FI+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRH 108

Query: 412 AFKENNMG---DDATIKEIISEVGRD 434
                N+G    D  + E+I E   D
Sbjct: 109 VM--TNLGEKLTDEEVDEMIREADVD 132

Length = 149

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 8/147 (5%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FGV +     +    YA K +    KM   E +  I     + +L S    I+  
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLS-KMNRREREEAIDEARVLAKLDS--SYIIRY 64

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
             +  D+  +++VME  + GDL   +         E         I+  +   HS  ++H
Sbjct: 65  YESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILH 124

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
           RD+K  N  F+   DN  +K+ D G A
Sbjct: 125 RDIKSLNL-FLDAYDN--VKIGDLGVA 148

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSGQPNIV 90
           +G G +G+ Y   + ++    A K    K +M    + + I   REI +   L   PNIV
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALK----KVRMDNERDGIPISSLREITLLLNLR-HPNIV 69

Query: 91  ELKS--AHEDETAVHVVMELCQG--GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           ELK     +   ++ +VME C+     L D +     +SE     ++  ++  +   H  
Sbjct: 70  ELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLHEN 127

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLK  N       D   LK+ DFG A  + 
Sbjct: 128 FIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 47.6 bits (113), Expect = 4e-06
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 7/150 (4%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLSGQP 87
           G +LG+G +G  Y C   +     A K +        A       ++ E+ + + L    
Sbjct: 5   GEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HV 62

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           NIV+      D+  + + ME   GG +   +   G   E       + I++ V   H+  
Sbjct: 63  NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           V+HRD+K  N   +    N ++K+ DFG A
Sbjct: 123 VVHRDIKGNNVMLMP---NGIIKLIDFGCA 149

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 13/146 (8%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQPNIVE 91
           LG G FG  Y      T +  A K +  K + +    D M+  EI I  L S   PNIV+
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL--EDYMV--EIDI--LASCDHPNIVK 66

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           L  A   E  + +++E C GG + D ++ +     +E     V +  + A+N  H   ++
Sbjct: 67  LLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKII 125

Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
           HRDLK  N  F    D   +K+ DFG
Sbjct: 126 HRDLKAGNILFTLDGD---IKLADFG 148

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 47.6 bits (113), Expect = 4e-06
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 5/154 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLL 83
            +  G+ LG G F   Y   +  T    A K +         + +++  +R+EI++   L
Sbjct: 1   EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           +  P+I+ +  A  +++  ++ +E   GG +   +   G + E         ++  ++  
Sbjct: 61  N-HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYL 119

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           H   ++HRD+K  N    S      L++ DFG+A
Sbjct: 120 HENQIIHRDVKGANLLIDSTGQR--LRIADFGAA 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 35/131 (26%)

Query: 75  REIQIRRLLSGQPNIVELKSAH--EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           REI   + L   PNIV+L +    E++  +++V E                Y E D   V
Sbjct: 55  REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFE----------------YMETDLHAV 98

Query: 133 LRA--------------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           +RA              ++ A+   HS  V+HRDLKP N   I  + +  +K+ DFG A 
Sbjct: 99  IRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSN---ILLNSDCRVKLADFGLAR 155

Query: 179 LFEEEGGEASD 189
              E      +
Sbjct: 156 SLSELEENPEN 166

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 47.0 bits (112), Expect = 7e-06
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERDAAP 131
           REI + + L    NIV L      +  + +V E C   DL   FD     G         
Sbjct: 48  REICLLKELK-HKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSC--NGDIDPEIVKS 103

Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            +  ++  +  CHS  V+HRDLKP+N      + N  LK+ DFG A  F
Sbjct: 104 FMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAF 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 47.0 bits (112), Expect = 9e-06
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPN 88
           R +G G FGV +  T+     P   K +A K      +N +  +R  +  ++L      N
Sbjct: 6   RPIGYGAFGVVWSVTD-----PRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN 60

Query: 89  IVE----LKSAHEDE-TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           ++     L+  H D    ++VV EL Q  DL   I++    S       L  I+  +   
Sbjct: 61  VLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYL 119

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           HS G++HRD+KP N    S   N +LK+ DFG A + E
Sbjct: 120 HSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEE 154

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T    A K +  K + +    D M+  EI         P IV+L
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYMVEIEILAT---CNHPYIVKL 74

Query: 93  KSAHEDETAVHVVMELCQGGDL------FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
             A   +  + +++E C GG +       DR +     +E     + R ++ A+   HSM
Sbjct: 75  LGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVICRQMLEALQYLHSM 129

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
            ++HRDLK  N       D   +K+ DFG
Sbjct: 130 KIIHRDLKAGNVLLTLDGD---IKLADFG 155

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 19/161 (11%)

Query: 31  RMLGRGRFG-VTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ- 86
           +++G G FG V    L       +P A K++    K  Y E     RR+      + GQ 
Sbjct: 10  KVIGAGEFGEVCSGRLKLPGKREIPVAIKTL----KAGYTEKQ---RRDFLSEASIMGQF 62

Query: 87  --PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNV 142
             PNI+ L+        V +V E  + G L D  + K  G ++      +LR I + +  
Sbjct: 63  DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKY 121

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              MG +HRDL   N   I  + N + KV+DFG + + E++
Sbjct: 122 LSDMGYVHRDLAARN---ILVNSNLVCKVSDFGLSRVLEDD 159

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
           +G+G FG  +   +N T    A K +     ++ AE+++  I++EI +       P + +
Sbjct: 12  IGKGSFGEVFKGIDNRTQQVVAIKII----DLEEAEDEIEDIQQEITVLSQCD-SPYVTK 66

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
              ++   T + ++ME   GG   D ++  G + E   A +L+ I+  ++  HS   +HR
Sbjct: 67  YYGSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 125

Query: 152 DLKPENFCFISRDDNALLKVTDFGSA 177
           D+K  N     + D   +K+ DFG A
Sbjct: 126 DIKAANVLLSEQGD---VKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 38/170 (22%)

Query: 27  YSFGRMLGRGRFGVTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           Y  G ++G G FGV Y  +C + S  +  A K + + P+ K         RE+ I + L+
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKV--AIKKVLQDPQYK--------NRELLIMKNLN 117

Query: 85  GQPNIVELKSAHEDETA--------VHVVMELCQGGDLFDRIIAK--GYYSERDAA-PVL 133
              NI+ LK  +  E          ++VVME         + + K   +Y+  + A P+ 
Sbjct: 118 -HINIIFLKDYYYTECFKKNEKNIFLNVVME------FIPQTVHKYMKHYARNNHALPLF 170

Query: 134 RAIVNAVNVC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              + +  +C      HS  + HRDLKP+N           LK+ DFGSA
Sbjct: 171 LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHT--LKLCDFGSA 218

Length = 440

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 23  VMLHYSFGRMLGRGRFGVTYLCTE--NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           V + Y+    L  G  G  ++CT+  +        K++                REI I 
Sbjct: 90  VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPG---------REIDIL 140

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           + +S    I+ L  A+  ++ V +VM   +  DLF  +   G      A  + R ++ A+
Sbjct: 141 KTIS-HRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEAL 198

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              H  G++HRD+K EN  F+   +NA+L   DFG+A
Sbjct: 199 AYLHGRGIIHRDVKTENI-FLDEPENAVLG--DFGAA 232

Length = 392

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 24/178 (13%)

Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REI 77
            +  +  +     +G G +G  Y   +  T    A K    K ++   +    I   REI
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALK----KVRLDNEKEGFPITAIREI 57

Query: 78  QIRRLLSGQPNIVELKSA----------HEDETAVHVVMELCQGGDLFDRIIAKG--YYS 125
           +I R L+   NIV LK             +D+ A ++V E     DL   ++  G  ++S
Sbjct: 58  KILRQLN-HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMG-LLESGLVHFS 114

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           E      ++ ++  +N CH    +HRD+K  N   I  ++   +K+ DFG A L+  E
Sbjct: 115 EDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSN---ILLNNKGQIKLADFGLARLYNSE 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 75  REIQIRRLLSGQPNIVELKSA-HEDETA----VHVVMELCQGGDLFDRIIAKGYYSER-- 127
           REI + ++LS    IV L    H +E      +++V E     DL   + + G    R  
Sbjct: 49  REISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPL 107

Query: 128 DAAPVLR---AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            A  +      ++  V  CH  GVMHRDLKP+N   +      LLK+ D G
Sbjct: 108 PAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQN--LLVDKQKGLLKIADLG 156

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 23/161 (14%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKS----MAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           +LG+G FG  +  T      P A K+    + ++ K+K+     ++++           P
Sbjct: 2   LLGKGNFGEVFKGTLKDKT-PVAVKTCKEDLPQELKIKFLSEARILKQ--------YDHP 52

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN---VCH 144
           NIV+L         +++VMEL  GGD    +  K    E     +++  ++A        
Sbjct: 53  NIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLE 110

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
           S   +HRDL   N C +   +N +LK++DFG +   +E+ G
Sbjct: 111 SKNCIHRDLAARN-CLVG--ENNVLKISDFGMSR--QEDDG 146

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 19/180 (10%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPY-ACKSMA------KKPKMKYAENDMMIRREIQI 79
           Y+    LG G FG  Y   + +      A K +        K K +  ++   I  E+ I
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRA 135
            +     PNIV       +   +++VM+L +G  L +   +    K  ++E     +   
Sbjct: 62  IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 136 IVNAVNVCH-SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           +V A+   H    ++HRDL P N      D    + +TDFG A    ++    S  TSV+
Sbjct: 122 MVLALRYLHKEKRIVHRDLTPNNIMLGEDDK---VTITDFGLA----KQKQPESKLTSVV 174

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 44.6 bits (106), Expect = 5e-05
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 28  SFGRMLGRGRFGVT--YLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLL 83
               ++G+    +   +L     TN   A K  ++    K         +++EI   R L
Sbjct: 1   ELLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKL----LQQEIITSRQL 56

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGG---DLFDRIIAKGYYSERDAAPVLRAIVNAV 140
              PNI+   ++   ++ ++VV  L   G   DL      +G   E   A +L+ ++NA+
Sbjct: 57  Q-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGL-PELAIAFILKDVLNAL 114

Query: 141 NVCHSMGVMHRDLK 154
           +  HS G +HR +K
Sbjct: 115 DYIHSKGFIHRSVK 128

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + G ++ +EL+  L  +G  L+E +V  L    D DG+G I + EF
Sbjct: 1   EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEF 46

Length = 53

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 16/116 (13%)

Query: 75  REIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGYY 124
           REI+I +LL    N+V L           +  + + ++V E C+     L      K  +
Sbjct: 60  REIKILQLLK-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK--F 116

Query: 125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +  +   V++ ++N +   H   ++HRD+K  N   I++D   +LK+ DFG A  F
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI-LITKD--GILKLADFGLARAF 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 28/174 (16%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLL 83
            Y     LG G FG  Y   +  T    A K    K  M   ++   I   REI+I + L
Sbjct: 9   DYEILGKLGEGTFGEVYKARQIKTGRVVALK----KILMHNEKDGFPITALREIKILKKL 64

Query: 84  SGQPNIVEL--------KSAHEDETAVHVVM-----ELCQGGDLFDRIIAKGYYSERDAA 130
              PN+V L          +     +V++V      +L   G L +  +     +E    
Sbjct: 65  K-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSV---KLTESQIK 118

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             +  ++  +N  H   ++HRD+K  N   I  D+  +LK+ DFG A  ++   
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAAN---ILIDNQGILKIADFGLARPYDGPP 169

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 25/146 (17%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG-NTKQFRAMN 351
           ++ + + +AF  FD D SG  + + +                K     LG   K+     
Sbjct: 14  DQKKEIREAFDLFDTDGSGTIDPKEL----------------KVAMRSLGFEPKK----E 53

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELE 410
            +K+++   D DG+G IDF EF+++MT  + + +  E + KAF+  D +    I++  L+
Sbjct: 54  EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLK 113

Query: 411 TAFKE--NNMGDDATIKEIISEVGRD 434
              KE    +  D  ++E+I E  R+
Sbjct: 114 RVAKELGETI-TDEELQEMIDEADRN 138

Length = 158

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 26/162 (16%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            R LG G+FG  ++ T N T    A K++ K   M          +E QI + L     +
Sbjct: 11  ERKLGAGQFGEVWMGTWNGT-TKVAVKTL-KPGTMSPEA----FLQEAQIMKKLR-HDKL 63

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---------AIVNAV 140
           V+L +   +E  +++V E    G L D       + +      LR          I   +
Sbjct: 64  VQLYAVCSEEEPIYIVTEYMSKGSLLD-------FLKSGEGKKLRLPQLVDMAAQIAEGM 116

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
               S   +HRDL   N   I   +N + K+ DFG A L E+
Sbjct: 117 AYLESRNYIHRDLAARN---ILVGENLVCKIADFGLARLIED 155

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            DV   Y     +G G +G+    T   T +  A K ++      + +  +   REI+I 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL---REIKIL 57

Query: 81  RLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           R    + NI+ +       + E    V++V EL +  DL+ ++I   + S       L  
Sbjct: 58  RRFKHE-NIIGILDIIRPPSFESFNDVYIVQELMET-DLY-KLIKTQHLSNDHIQYFLYQ 114

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           I+  +   HS  V+HRDLKP N   +  + N  LK+ DFG A
Sbjct: 115 ILRGLKYIHSANVLHRDLKPSN---LLLNTNCDLKICDFGLA 153

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG+G FG  ++ T N T    A K++  KP     E  +   +E Q+ + L  +  +V+L
Sbjct: 14  LGQGCFGEVWMGTWNGTTR-VAIKTL--KPGTMSPEAFL---QEAQVMKKLRHE-KLVQL 66

Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSMGV 148
            +   +E  +++V E    G L D +  KG   +    P L      I + +     M  
Sbjct: 67  YAVVSEE-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +HRDL+  N   I   +N + KV DFG A L E+
Sbjct: 124 VHRDLRAAN---ILVGENLVCKVADFGLARLIED 154

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 29/167 (17%)

Query: 31  RMLGRGRFGVTYLCT------ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             LG G FG  Y  T        S  +  A K++ K         D   +  ++   L+S
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK------GATDQEKKEFLKEAHLMS 54

Query: 85  G--QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI------ 136
               PNIV+L          +++MEL +GGDL   +  +    ER   P+L         
Sbjct: 55  NFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYL--RDARVERFGPPLLTLKELLDIC 112

Query: 137 VNAVNVCH---SMGVMHRDLKPENFCFISRDDNA---LLKVTDFGSA 177
           ++    C     M  +HRDL   N C +S        ++K+ DFG A
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARN-CLVSEKGYDADRVVKIGDFGLA 158

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 24/156 (15%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR---EIQIRRLLSGQPNI 89
           +GRG +G+      + TN   A K +A        +N +  +R   EI++ R L  + N+
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANA-----FDNRIDAKRTLREIKLLRHLDHE-NV 66

Query: 90  VELK--------SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
           + +K         A  D   V++V EL    DL   I +    S+      L  ++  + 
Sbjct: 67  IAIKDIMPPPHREAFND---VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLK 122

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             HS  V+HRDLKP N      + N  LK+ DFG A
Sbjct: 123 YIHSANVLHRDLKPSNLLL---NANCDLKICDFGLA 155

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 35/206 (16%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA-KKPKMKYAENDMMIRREIQIRRL 82
           M  Y   R++G+G  G  YL  +     P   + +A KK +   +EN ++ +R ++  ++
Sbjct: 1   MQRYDIIRLIGKGGMGEVYLAYD-----PVCSRRVALKKIREDLSENPLLKKRFLREAKI 55

Query: 83  LSG--QPNIVELKSAHEDETAVHVVMELCQGGDL-------FDRIIAKGYYSERDAA--- 130
            +    P IV + S   D   V+  M   +G  L       + +       +E+ +    
Sbjct: 56  AADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAF 115

Query: 131 -PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK------VTDFGSALLFEEE 183
             +   I   +   HS GV+HRDLKP         DN LL       + D+G+A+  + E
Sbjct: 116 LSIFHKICATIEYVHSKGVLHRDLKP---------DNILLGLFGEVVILDWGAAIFKKLE 166

Query: 184 GGEASDDTSVILRMKQFRRMSKLKKL 209
             +   D  V  R   +  M+   K+
Sbjct: 167 EEDLL-DIDVDERNICYSSMTIPGKI 191

Length = 932

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 26/166 (15%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R LG G+FG  +    N+T  P A K++ K   M     D +   E QI + L   P ++
Sbjct: 12  RKLGAGQFGEVWEGLWNNTT-PVAVKTL-KPGTM--DPKDFL--AEAQIMKKLR-HPKLI 64

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIVNAVNVCHSMG 147
           +L +    E  +++V EL + G L +       Y +  A   L+    I  A  V   M 
Sbjct: 65  QLYAVCTLEEPIYIVTELMKYGSLLE-------YLQGGAGRALKLPQLIDMAAQVASGMA 117

Query: 148 VM------HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
            +      HRDL   N   +   +N + KV DFG A + +E+  EA
Sbjct: 118 YLEAQNYIHRDLAARN---VLVGENNICKVADFGLARVIKEDIYEA 160

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 25/162 (15%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSG--QPN 88
           +G G +G  Y   +  +    A KS+    +++  E+ + +   RE+ + + L     PN
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSV----RVQTNEDGLPLSTVREVALLKRLEAFDHPN 63

Query: 89  IVEL----KSAHED-ETAVHVVMELCQGGDL---FDRIIAKGYYSE--RDAAPVLRAIVN 138
           IV L     ++  D ET V +V E     DL    D++   G  +E  +D   ++R  + 
Sbjct: 64  IVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKD---LMRQFLR 119

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            ++  H+  ++HRDLKPEN    S      +K+ DFG A ++
Sbjct: 120 GLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG+G +G+ Y   + ST +  A K + +    + +     +  EI +   L    NIV+
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPE----RDSRYVQPLHEEIALHSYLK-HRNIVQ 69

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVL--RAIVNAVNVCHSMGV 148
              +  +     + ME   GG L   + +K G   + +   +   + I+  +   H   +
Sbjct: 70  YLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K +N   +    + ++K++DFG++
Sbjct: 130 VHRDIKGDN--VLVNTYSGVVKISDFGTS 156

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 25/85 (29%)

Query: 297 YLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
            L +AF+ FDKD  G    DE +A +                 K  G G +++      +
Sbjct: 1   ELREAFRLFDKDGDGTISADELKAAL-----------------KSLGEGLSEEE-----I 38

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMT 378
            +++ + D DG+G IDF EF+ LM 
Sbjct: 39  DEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.0 bits (96), Expect = 7e-04
 Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 21/167 (12%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI 79
           D+ + +     LG G++G  Y       ++  A K++ K+  M+  E   +  + +EI+ 
Sbjct: 7   DITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK- 60

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AI 136
                  PN+V+L      E   +++ E    G+L D +       E +A  +L     I
Sbjct: 61  ------HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQI 113

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            +A+        +HRDL   N C +   +N L+KV DFG + L   +
Sbjct: 114 SSAMEYLEKKNFIHRDLAARN-CLVG--ENHLVKVADFGLSRLMTGD 157

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 41.1 bits (96), Expect = 7e-04
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 20/155 (12%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
            ++G G +G  Y      T    A K M         + +  I+ EI + +  S   NI 
Sbjct: 22  EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIA 76

Query: 91  ELKSA--------HEDETAVHVVMELCQGGDLFDRII-AKGYYSERD-AAPVLRAIVNAV 140
               A        H+D+  + +VME C  G + D +   KG   + D  A + R I+  +
Sbjct: 77  TYYGAFIKKSPPGHDDQ--LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGL 134

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              H+  V+HRD+K +N       +NA +K+ DFG
Sbjct: 135 AHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFG 166

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 22/168 (13%)

Query: 32  MLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-- 86
           ++G G FG      L       +  A K++    K  Y E     RR+      + GQ  
Sbjct: 11  VIGAGEFGEVCRGRLKLPGKREIFVAIKTL----KSGYTEKQ---RRDFLSEASIMGQFD 63

Query: 87  -PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
            PNI+ L+        V ++ E  + G  D F R    G ++      +LR I   +   
Sbjct: 64  HPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYL 122

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
             M  +HRDL   N   I  + N + KV+DFG +   E+   + SD T
Sbjct: 123 SEMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRFLED---DTSDPT 164

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 40.8 bits (95), Expect = 8e-04
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G  GV +  +   + +  A K   +  KP ++       I RE+Q+    +  P IV
Sbjct: 13  LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 66

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSM-GV 148
               A   +  + + ME   GG L D+++ K G   E+    V  A++  +        +
Sbjct: 67  GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 125

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           MHRD+KP N    SR +   +K+ DFG
Sbjct: 126 MHRDVKPSNILVNSRGE---IKLCDFG 149

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 7/60 (11%)

Query: 267 EAADMDGNGAIDYTEF----TAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMV 319
           +  D DG+G ID  E      A  ++    E  E +   F   DKD  G   ++EF   +
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           V+R ++  +   H +G++HRD+KPEN   ++ D    +K+ DFG+A+
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENL-LVTVDGQ--VKIIDFGAAV 357

Length = 507

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 43/128 (33%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 58  MAKKPKMKYAENDM--MIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLF 115
           MAKK     A++ +   I RE+QI       P IV    A  +E  + + ME    G L 
Sbjct: 33  MAKKVVHIGAKSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMCMEFMDCGSL- 90

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAV--------NVCHSMGVMHRDLKPENFCFISRDDNA 167
           DRI  KG     +   +L  I  AV        NV     +MHRD+KP N    SR    
Sbjct: 91  DRIYKKGGPIPVE---ILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQ-- 142

Query: 168 LLKVTDFG 175
            +K+ DFG
Sbjct: 143 -IKLCDFG 149

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 50/201 (24%), Positives = 71/201 (35%), Gaps = 49/201 (24%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK---YAENDMMIRREIQIRRL 82
               G  +G+G FG   L          A K +           AE  +M          
Sbjct: 7   ELKLGATIGKGEFGDVMLGD--YRGQKVAVKCLKDDSTAAQAFLAEASVMTTLR------ 58

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN---- 138
               PN+V+L         +++V E    G L D + ++G           RA++     
Sbjct: 59  ---HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG-----------RAVITLAQQ 104

Query: 139 ---AVNVCHSM------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
              A++VC  M        +HRDL   N   +S D  A  KV+DFG  L  E   G+ S 
Sbjct: 105 LGFALDVCEGMEYLEEKNFVHRDLAARNV-LVSEDLVA--KVSDFG--LAKEASQGQDSG 159

Query: 190 DTSV------ILRMKQFRRMS 204
              V       LR K+F   S
Sbjct: 160 KLPVKWTAPEALREKKFSTKS 180

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 16/117 (13%)

Query: 70  DMMIRREIQIRRLLSGQPNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYY 124
           D  I  E  I + LS  PN+V+      K   ++   + +V+ELC GG + D  + KG+ 
Sbjct: 58  DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD--LVKGFL 115

Query: 125 S--ERDAAPVLRAIVN----AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              ER   P++  I++     +   H    +HRD+K  N    +      +K+ DFG
Sbjct: 116 KRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG---VKLVDFG 169

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 11/159 (6%)

Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQ 78
           V+  Y   + +G G  G+     +    +  A K +++    +   K A  ++++ + + 
Sbjct: 19  VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 78

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
            + ++S   N+   + + E+   V++VMEL        ++I      ER  + +L  ++ 
Sbjct: 79  HKNIIS-LLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIHMELDHER-MSYLLYQMLC 134

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +   HS G++HRDLKP N    S   +  LK+ DFG A
Sbjct: 135 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 170

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 21/168 (12%)

Query: 28  SFGRMLGRGRFGVTYLCTENST-NMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
           + G+ LG G FG           N         K  K    E D+  +  E+++ +++  
Sbjct: 15  TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 74

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPV-----LRAI 136
             NI+ L      E  ++VV+E    G+L D + A+     Y S  D  P       + +
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134

Query: 137 VN-AVNVCHSMG------VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           V+ A  V   M        +HRDL   N   +   ++ ++K+ DFG A
Sbjct: 135 VSFAYQVARGMEFLASKKCIHRDLAARN---VLVTEDHVMKIADFGLA 179

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 34/175 (19%)

Query: 28  SFGRMLGRGRFGVTYLC--------------TENSTNMPY--ACKSMAKKPKMKYAENDM 71
           +F   LG G+FG  +LC               + S N P   A K M ++   K A ND 
Sbjct: 8   TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVK-MLREDANKNARNDF 66

Query: 72  MIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERD 128
           +  +EI+I   L   PNI+ L +       + ++ E  + GDL     R   +    + D
Sbjct: 67  L--KEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123

Query: 129 AAPV--------LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              +           I + +    S+  +HRDL   N C + +  N  +K+ DFG
Sbjct: 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN-CLVGK--NYTIKIADFG 175

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 42/185 (22%)

Query: 26  HYSFGRMLGRGRFGVTYLC-TENSTNMP---------------YACKSMAKKPKMKYAEN 69
           H  F   LG G+FG  +LC   N  ++P                A K + +    K A N
Sbjct: 6   HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVK-ILRPDANKNARN 64

Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDL--------FDRIIAK 121
           D +  +E++I   L   PNI+ L     DE  + ++ E  + GDL         D     
Sbjct: 65  DFL--KEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEEN 121

Query: 122 GYYSERDAAP-----------VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK 170
           G  +   A             V   I + +    S+  +HRDL   N C +   +N  +K
Sbjct: 122 GNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRN-CLVG--ENLTIK 178

Query: 171 VTDFG 175
           + DFG
Sbjct: 179 IADFG 183

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
           D DG+G I   E    +  + +  + E +++  + +DK+ D  I   E 
Sbjct: 10  DKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEF 58

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 389 LEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDH 435
           L +AF+  DK+ D  I+ +EL+ A K    G  +  I E+I EV +D 
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDG 49

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 30/174 (17%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCT---ENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
           ED+ L    GR +G G+FG  Y        +  +  A K+          E  +   +E 
Sbjct: 6   EDITL----GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFL---QEA 58

Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRA 135
            I R     P+IV+L     +   V +VMEL   G+L         Y    + +  +   
Sbjct: 59  YIMRQFD-HPHIVKLIGVITEN-PVWIVMELAPLGEL-------RSYLQVNKYSLDLASL 109

Query: 136 IVNAVNVC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           I+ +  +        S   +HRD+   N    S D    +K+ DFG +   E+E
Sbjct: 110 ILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDE 160

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 16/152 (10%)

Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           ++G G +G  Y      T    A K M         + +  I++EI + +  S   NI  
Sbjct: 13  LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----GDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 92  LKSAHEDET------AVHVVMELCQGGDLFDRII-AKG-YYSERDAAPVLRAIVNAVNVC 143
              A   +        + +VME C  G + D I   KG    E   A + R I+  ++  
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           H   V+HRD+K +N       +NA +K+ DFG
Sbjct: 128 HQHKVIHRDIKGQNVLLT---ENAEVKLVDFG 156

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKS--MAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G  GV        + +  A K   +  KP ++       I RE+++    +  P IV
Sbjct: 9   LGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR-----NQIIRELKVLHECN-SPYIV 62

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVC---HSM 146
               A   +  + + ME   GG L D+++ K G   E     +  A++  +      H  
Sbjct: 63  GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLTYLREKHK- 120

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +MHRD+KP N    SR +   +K+ DFG
Sbjct: 121 -IMHRDVKPSNILVNSRGE---IKLCDFG 145

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS G++HRDLKP N   I    +  LK+ DFG A
Sbjct: 135 HSAGIIHRDLKPSN---IVVKSDCTLKILDFGLA 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIY----KLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           D DG+G ID  E   L+  +       E  EL+E  F  +DK+ D  I+  E   A 
Sbjct: 4   DKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 30/176 (17%)

Query: 26  HYSFGRMLGRGRFGVTYLC----TENSTNMPYACKSMA----KKPKMKYAENDMMIRREI 77
            Y   + LG+G +G+  +C     E S     A K +     KK   K A       RE+
Sbjct: 1   RYELIKELGQGAYGI--VCSARNAETSEEETVAIKKITNVFSKKILAKRA------LREL 52

Query: 78  QIRRLLSGQPNIVEL------KSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAA 130
           ++ R   G  NI  L         + +E  +++  EL +  DL  +II  G   ++    
Sbjct: 53  KLLRHFRGHKNITCLYDMDIVFPGNFNE--LYLYEELMEA-DL-HQIIRSGQPLTDAHFQ 108

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
             +  I+  +   HS  V+HRDLKP N    +   +  LK+ DFG A  F E  GE
Sbjct: 109 SFIYQILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFSENPGE 161

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 13/157 (8%)

Query: 28  SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           SFG+ LG G FG       Y  +++   M  A K +  KP    +E + ++  E++I   
Sbjct: 38  SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKML--KPTAHSSEREALMS-ELKIMSH 94

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSERDAAPVLRAIVNAV 140
           L    NIV L  A      + V+ E C  GDL +  R   + + +  D       +   +
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
               S   +HRDL   N          ++K+ DFG A
Sbjct: 155 AFLASKNCIHRDLAARNVLLTH---GKIVKICDFGLA 188

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVG 254
           L+E F   D D +G +S +ELR  L  +G
Sbjct: 2   LREAFKLFDKDGDGYISAEELRKALRSLG 30

Length = 30

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           CH   V+HRDLKP+N   IS  +   LK+ DFG A
Sbjct: 119 CHQRRVLHRDLKPQNL-LIS--ERGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)

Query: 31  RMLGRGRFGVTYLC----TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           R LG G FG   LC      ++T    A KS+  +    +  +   +++EI+I R L  +
Sbjct: 10  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEIEILRNLYHE 66

Query: 87  PNIVELKSAHEDE--TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
            NIV+ K    ++    + ++ME    G L      K Y         L+  +  AV +C
Sbjct: 67  -NIVKYKGICTEDGGNGIKLIMEFLPSGSL------KEYLPRNKNKINLKQQLKYAVQIC 119

Query: 144 HSMGVM------HRDLKPENFCFISRDDNALLKVTDFG 175
             M  +      HRDL   N   +  +    +K+ DFG
Sbjct: 120 KGMDYLGSRQYVHRDLAARN---VLVESEHQVKIGDFG 154

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 22/165 (13%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLSGQ 86
           F   LG G FG  Y       N   +  S+A K   + AE  +    R+E ++   L   
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-H 67

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----------- 135
           PNIV L      E    ++ E    GDL + ++    +S+  A                 
Sbjct: 68  PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127

Query: 136 -----IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                I   +    S   +HRDL   N C +   +   +K++DFG
Sbjct: 128 HIAIQIAAGMEYLSSHHFVHRDLAARN-CLVG--EGLTVKISDFG 169

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	436
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.98
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.98
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.98
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.98
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.98
PTZ00036	440	glycogen synthase kinase; Provisional	99.98
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.98
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.98
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.98
PHA03212	391	serine/threonine kinase US3; Provisional	99.98
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.98
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.98
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.98
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.98
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.98
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.98
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.98
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.98
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.98
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.98
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.98
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.98
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.98
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.97
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.96
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.96
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.96
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.96
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.96
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.96
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.96
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.96
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
KOG1152	772	consensus Signal transduction serine/threonine kin	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.96
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.96
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.96
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.96
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.96
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.96
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.96
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.96
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.95
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.95
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.95
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.95
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.95
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.94
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.94
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.93
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.93
KOG3653	534	consensus Transforming growth factor beta/activin	99.93
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.93
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.91
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.91
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.91
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.91
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.9
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.9
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.89
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.89
PRK10345	210	hypothetical protein; Provisional	99.89
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.88
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.87
smart00090	237	RIO RIO-like kinase.	99.86
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.86
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.85
PRK12274	218	serine/threonine protein kinase; Provisional	99.85
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.82
PRK14879	211	serine/threonine protein kinase; Provisional	99.81
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.8
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.8
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.77
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.77
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.77
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.77
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.76
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.76
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.75
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.74
PTZ00183	158	centrin; Provisional	99.74
PTZ00184	149	calmodulin; Provisional	99.73
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.72
PLN00181	793	protein SPA1-RELATED; Provisional	99.7
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.7
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.68
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.67
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.67
PTZ00183	158	centrin; Provisional	99.65
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.65
PTZ00184	149	calmodulin; Provisional	99.63
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.62
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.61
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.61
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.6
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.59
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.58
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.56
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.51
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.51
PLN02964	644	phosphatidylserine decarboxylase	99.48
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.46
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.43
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.43
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.42
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.41
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.32
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.28
KOG3087	229	consensus Serine/threonine protein kinase [General	99.26
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.26
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.22
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.19
KOG4251	362	consensus Calcium binding protein [General functio	99.15
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.14
KOG1243	690	consensus Protein kinase [General function predict	99.13
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.11
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.09
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.05
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.04
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.02
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.02
PLN02964	644	phosphatidylserine decarboxylase	98.98
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.97
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.96
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.94
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.84
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.83
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.83
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.81
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.76
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.75
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.74
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	98.74
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.71
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.71
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.7
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.69
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	98.68
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.66
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.65
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.65
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.61
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.6
KOG0038	189	consensus Ca2+-binding kinase interacting protein	98.6
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.6
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.57
KOG0751	694	consensus Mitochondrial aspartate/glutamate carrie	98.55
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.55

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-43  Score=320.87  Aligned_cols=246  Identities=26%  Similarity=0.388  Sum_probs=195.1

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ....+|.+.+.||+|+||+||+|+++.++..||||.+.+....  ....+.+..|+.+|+.+ +|||||+++++...++.
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~--~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~   83 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN--KKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDF   83 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC--HHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCe
Confidence            3557899999999999999999999999999999999887543  35677889999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC---CcEEEEecCCcc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN---ALLKVTDFGSAL  178 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~---~~~kl~DFG~a~  178 (436)
                      +|+|||||.||+|.+++++++.+++..++.++.||+.|+++||+++||||||||+|||+......   ..+||+|||+|+
T Consensus        84 i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR  163 (429)
T KOG0595|consen   84 IYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR  163 (429)
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence            99999999999999999999999999999999999999999999999999999999999754222   579999999999


Q ss_pred             cccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .+.+..       .....|||++.. ++|+.++|+||+ ++++.+.+.              .+.+--.-+..||...++
T Consensus       164 ~L~~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSi-G~Ilyq~l~--------------g~~Pf~a~t~~eL~~~~~  227 (429)
T KOG0595|consen  164 FLQPGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSI-GTILYQCLT--------------GKPPFDAETPKELLLYIK  227 (429)
T ss_pred             hCCchhHHHHhhCCccccCHHHHHh-ccccchhhHHHH-HHHHHHHHh--------------CCCCccccCHHHHHHHHh
Confidence            987532       222339999874 789999999998 555544441              122222334444444333


Q ss_pred             hcC-------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          252 KVG-------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       252 ~~~-------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +=.       ...+....+.++.....+...++++.+|...-
T Consensus       228 k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~  269 (429)
T KOG0595|consen  228 KGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP  269 (429)
T ss_pred             ccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence            211       11233334566666667777788998887653

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.9e-44  Score=311.37  Aligned_cols=255  Identities=19%  Similarity=0.275  Sum_probs=205.9

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      |++|..+..+|+|+||.||+|+++.||+.||||.+..+...  +...+..+|||.+|++| +|||+|.++++|.....+|
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd--~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklh   77 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD--PVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLH   77 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCcc--HHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeE
Confidence            57899999999999999999999999999999998765433  35566789999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +|+|||+. ++.+.+... ..++...+..+++|++.|+.|||+++++||||||+|||+   +.++.+||||||+|+.+..
T Consensus        78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcC
Confidence            99999988 776777664 349999999999999999999999999999999999999   7889999999999999875


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC---------
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN---------  238 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~---------  238 (436)
                      ++..        +..|||.+.+-.+|+.++|||++ +|++++.+       +.++++++..+-..++.=..         
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAi-GCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N  232 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAI-GCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN  232 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhh-hHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence            4332        22399999998999999999999 88888876       56778887776555432110         


Q ss_pred             ----C--ccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          239 ----G--TLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       239 ----g--~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                          |  ...++++...-++ -+..+.-.++.+-+.++.|++.+++.++.+.+-+
T Consensus       233 ~~F~Gv~lP~~~~~epLe~k-~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y  286 (396)
T KOG0593|consen  233 PFFHGVRLPEPEHPEPLERK-YPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY  286 (396)
T ss_pred             CceeeeecCCCCCccchhhh-cccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence                1  0111112121112 1244556678888889999999999999886643

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.2e-42  Score=298.98  Aligned_cols=257  Identities=21%  Similarity=0.280  Sum_probs=214.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|...+.||+|+||.||+|++..||+.||||.++.....  ........|||..|+.+ +||||+.++++|.....+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k--dGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~l   78 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK--DGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSL   78 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc--cCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEE
Confidence            5799999999999999999999999999999999876433  23455688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |+||++. +|...++... .++..+++.++.+++.|+.|||++.|+||||||.|+|+   +++|.+||+|||+|+.+.+.
T Consensus        79 VfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   79 VFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             EEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCC
Confidence            9999987 9999998754 48999999999999999999999999999999999999   78999999999999998765


Q ss_pred             CCCCC--------CChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc-------c
Q 042392          184 GGEAS--------DDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT-------L  241 (436)
Q Consensus       184 ~~~~~--------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~-------i  241 (436)
                      .....        .|||.+.|.+.|+..+|+||. +|++++.+       +..+++++..+|+.++++....       .
T Consensus       155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWav-GCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAV-GCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             CcccccceeeeeccChHHhccchhcCCcchhhhH-HHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence            44322        299999999999999999999 89999876       7889999999999998765422       2


Q ss_pred             CHHHHHHHH----HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          242 SYDELRAGL----TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       242 ~~~eL~~~l----~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++.+++..-    ..+....+...++.+-+.+..|+-.+|+-.+-+.+-+..
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~  285 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK  285 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence            333333111    112223455567777788888888899988887764433

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.2e-43  Score=325.22  Aligned_cols=256  Identities=20%  Similarity=0.306  Sum_probs=213.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      ...+.|..++.||+|+||.||+|++..||+.||+|.+......  ........|||.||++| +||||+++.+.....  
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~  190 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLS  190 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhc-CCCcccceeeEEEecCC
Confidence            3456799999999999999999999999999999999876543  35567788999999999 799999999998876  


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..+|+|+|||+. ||..++...+ .|++.+++.+++||+.||.|||.+||+|||||.+|||+   +.+|.+||+|||+|+
T Consensus       191 ~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  191 GSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLAR  266 (560)
T ss_pred             ceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEecccccee
Confidence            689999999998 9999988753 59999999999999999999999999999999999999   889999999999999


Q ss_pred             cccccCCCCC---------CChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCccC
Q 042392          179 LFEEEGGEAS---------DDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       179 ~~~~~~~~~~---------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      .+........         .+||.|+|...|+.++|+||. +|++++.+       +..+++++..||..++.+.+.+-.
T Consensus       267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~-GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  267 FYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSV-GCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             eccCCCCcccccceEEeeccChHHhcCCcccccceeehhh-hHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence            8876554322         299999999999999999999 89999987       678899999999999877665422


Q ss_pred             HHHH------------HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          243 YDEL------------RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       243 ~~eL------------~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...|            ...++.....++...++.+-..+..|++.+++-.+-+..
T Consensus       346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            1111            122233344567777777777778888888776665443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.5e-42  Score=313.77  Aligned_cols=251  Identities=26%  Similarity=0.375  Sum_probs=194.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch---hhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY---AENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .+.+.+.|.+.+.||+|+||.|.+|..+.||+.||||++.+......   ......+.+|+++|++| +|||||+++++|
T Consensus       167 pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f  245 (475)
T KOG0615|consen  167 PKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFF  245 (475)
T ss_pred             cchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeee
Confidence            34578889999999999999999999999999999999987654331   11234478999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ..+...|+||||++||+|++++...+.+.+...+.+++|++.|+.|||++||+||||||+|||+.....+..+||+|||+
T Consensus       246 ~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  246 EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence            99999999999999999999999999999999999999999999999999999999999999997766778999999999


Q ss_pred             ccccccc-------CCCCCCChHHHHHH--HHHHHhhhhhhHHHHHH---HhcCChhhHHHHHHHhhhhCCCCCCccCH-
Q 042392          177 ALLFEEE-------GGEASDDTSVILRM--KQFRRMSKLKKLTVKVI---VEYLPGEETQALKEKFIEMDTDKNGTLSY-  243 (436)
Q Consensus       177 a~~~~~~-------~~~~~~~pe~~~~~--~~~~~~~d~~s~~~~~~---~~~l~~e~~~~l~~~F~~~D~~~~g~i~~-  243 (436)
                      |+.....       +.....|||++.+.  ..|..++|+||+|+.++   ..+.+..+              ..+..+. 
T Consensus       326 AK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~--------------~~~~~sl~  391 (475)
T KOG0615|consen  326 AKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE--------------EYTDPSLK  391 (475)
T ss_pred             hhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc--------------ccCCccHH
Confidence            9987532       22334499999853  34556889999955432   22222211              1122211 


Q ss_pred             HHHHHHHHhcC----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          244 DELRAGLTKVG----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       244 ~eL~~~l~~~~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +++.++=-.++    ..++++..+.+=.++-.|++.|.+-.|-+.+
T Consensus       392 eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  392 EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            11211111122    2456666666666788899999999888764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-41  Score=320.93  Aligned_cols=241  Identities=28%  Similarity=0.382  Sum_probs=199.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|...+.||+|+|+.||.+++..+|+.||+|++.+....+ +.....+.+||+|++.| +|||||+++++|++.+++||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k-~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK-PKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC-cchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEE
Confidence            46999999999999999999999999999999999876555 56677899999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |+|+|+.++|..++++.++++|.+++.+++||+.||.|||+++|+|||||..|+++   +.+.+|||+|||+|..+..++
T Consensus        96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcc
Confidence            99999999999999999999999999999999999999999999999999999999   788899999999999987542


Q ss_pred             CC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC---ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc
Q 042392          185 GE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL---PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV  253 (436)
Q Consensus       185 ~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l---~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~  253 (436)
                      ..        -..|||++.+ ..++..+||||+ +|++.-.+   +|-+...+.+.+.++-.+.-             .+
T Consensus       173 Erk~TlCGTPNYIAPEVl~k-~gHsfEvDiWSl-GcvmYtLL~G~PPFetk~vkety~~Ik~~~Y-------------~~  237 (592)
T KOG0575|consen  173 ERKKTLCGTPNYIAPEVLNK-SGHSFEVDIWSL-GCVMYTLLVGRPPFETKTVKETYNKIKLNEY-------------SM  237 (592)
T ss_pred             cccceecCCCcccChhHhcc-CCCCCchhhhhh-hhHHHhhhhCCCCcccchHHHHHHHHHhcCc-------------cc
Confidence            22        1229999996 567899999999 44444433   34444444444444322211             12


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...++.+..+.+-+.++.|+..|++.++.+..
T Consensus       238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  238 PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            34566666677777788899999999887765

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-42  Score=316.20  Aligned_cols=258  Identities=22%  Similarity=0.279  Sum_probs=212.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...++++|++++.||.|+||.||+|+.+.+|..||||.+++....   ..+..-+||+..|++|..|||||++.+++.+.
T Consensus         5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s---~ee~~nLREvksL~kln~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNPHPNIIKLKEVIRDN   81 (538)
T ss_pred             ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc---HHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence            346889999999999999999999999999999999998776532   34455679999999995599999999999988


Q ss_pred             C-eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 T-AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~-~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      . .+|+|||||+. +|+++++.+. .+++..++.|+.||+.||+|+|++|+.||||||||||+   .....+||+|||+|
T Consensus        82 ~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLA  157 (538)
T KOG0661|consen   82 DRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLA  157 (538)
T ss_pred             CceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEecccccc
Confidence            7 99999999986 9999999875 49999999999999999999999999999999999999   55779999999999


Q ss_pred             ccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          178 LLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       178 ~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      +.+.+...-       +..|||++++...|+.+.|+|++ +|++++..       +..+++++.++...++++.......
T Consensus       158 Rev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~-GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e  236 (538)
T KOG0661|consen  158 REVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAV-GCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE  236 (538)
T ss_pred             cccccCCCcchhhhcccccchHHhhhccccCCchHHHHH-HHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence            998765432       33399999999999999999999 78877754       6789999999999998765544333


Q ss_pred             -HHHHHHHHh------------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          244 -DELRAGLTK------------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       244 -~eL~~~l~~------------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       .+|...+.-            +-.+.+.+-+..+-+.+-=|++.|.+=.+-+.+
T Consensus       237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence             444444431            112335555565666666788888888886665

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.4e-41  Score=297.86  Aligned_cols=208  Identities=21%  Similarity=0.287  Sum_probs=184.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--C
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--T  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~  100 (436)
                      -.+.|+.+..|++|+||.||+|+++.|++.||+|.++.....  ....-..+|||.+|.++ +|||||.+.++....  +
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek--~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK--EGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc--CCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccc
Confidence            446799999999999999999999999999999998765422  34455678999999999 599999999987643  6


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+|||||+. +|..++...+ +++..+++.++.|++.|+.|||.+.|+||||||+|+|+   ...|.+||+|||+|+.
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLARE  226 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhh
Confidence            79999999998 9999998876 79999999999999999999999999999999999999   7889999999999999


Q ss_pred             ccccCCCCCC--------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC
Q 042392          180 FEEEGGEASD--------DTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       180 ~~~~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~  238 (436)
                      +.++....+.        +||.+++.+.|+.++|+||+ +|++++.+       +..+++++..+|+.++.+..
T Consensus       227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSv-GCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte  299 (419)
T KOG0663|consen  227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSV-GCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSE  299 (419)
T ss_pred             hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhH-HHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcc
Confidence            9876444332        99999999999999999999 89998876       67899999999999987765

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=299.43  Aligned_cols=190  Identities=27%  Similarity=0.406  Sum_probs=168.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .-.++|+++++||+|+||+||.++.+.|++.||+|++++..... .........|..+|..+ +||+||.++..|++...
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~k   99 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEK   99 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh-hhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCe
Confidence            34678999999999999999999999999999999998876655 34567789999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+|+||+.||+|+..|++.+.+++..++.++.+|+.||.|||+.|||||||||+|||+   +..|+++|+|||+|+...
T Consensus       100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcc
Confidence            99999999999999999999999999999999999999999999999999999999999   899999999999999654


Q ss_pred             ccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          182 EEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       182 ~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ..+...        ..|||++.+. .|+.++|.||+|+ ++.+++
T Consensus       177 ~~~~~t~tfcGT~eYmAPEil~~~-gy~~~vDWWsLGi-llYeML  219 (357)
T KOG0598|consen  177 KDGDATRTFCGTPEYMAPEILLGK-GYDKAVDWWSLGI-LLYEML  219 (357)
T ss_pred             cCCCccccccCCccccChHHHhcC-CCCcccchHhHHH-HHHHHh
Confidence            432222        2299999985 8999999999944 455554

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-40  Score=309.31  Aligned_cols=247  Identities=28%  Similarity=0.386  Sum_probs=193.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -..+|.+++.||.|+|++|++|+++.+++.||||++.+....+ ....+.+.+|-.+|..|++||.|++|+..|++...+
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iik-e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIK-EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHh-hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            3457999999999999999999999999999999998876655 445567889999999998899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|+||+++|+|.++|.+.+.+++..++.++.||+.||.|||++|||||||||+|||+   +.+++++|+|||.|+.+.+
T Consensus       150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCCh
Confidence            9999999999999999999999999999999999999999999999999999999999   8999999999999998865


Q ss_pred             cCCC----------CC-----------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          183 EGGE----------AS-----------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       183 ~~~~----------~~-----------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                      ....          .+           -+||+|.. ..-++.+|||++ +|++.+++...      ..|+    ..+-++
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAl-GCilyQmlaG~------PPFr----a~Neyl  294 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWAL-GCILYQMLAGQ------PPFR----AANEYL  294 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHH-HHHHHHHhcCC------CCCc----cccHHH
Confidence            3221          01           17888876 566789999999 77776666211      0011    122233


Q ss_pred             CHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          242 SYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       242 ~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ....+++.--.+...+++.-.+.+-+-+..|.+.|++-++...+
T Consensus       295 iFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  295 IFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            33334443334444455333333334456666666666665443

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-39  Score=290.43  Aligned_cols=243  Identities=19%  Similarity=0.203  Sum_probs=191.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe-EE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA-VH  103 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~  103 (436)
                      .+.+.+..||+|+.|+||+|+|+.|++.+|+|++.....   +....++.+|+++++.+ +||+||++|++|..++. ++
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~---~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNID---PALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCC---HHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEE
Confidence            467788999999999999999999999999999944332   46678899999999999 79999999999999995 99


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||++|+|.++++..++++|.....++.+|++||.|||. ++||||||||+|||+   +..|.|||||||.+..+..
T Consensus       155 I~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             eehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhh
Confidence            999999999999999999999999999999999999999995 999999999999999   7889999999999998766


Q ss_pred             cCC------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-cCC
Q 042392          183 EGG------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-VGS  255 (436)
Q Consensus       183 ~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-~~~  255 (436)
                      .-.      .+..+||-+.+ ..|+..+||||+|+.++--.++.-.          +-.+.....+.-+|..++-. -.+
T Consensus       232 S~a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP----------~~~~~~~~~~~~~Ll~~Iv~~ppP  300 (364)
T KOG0581|consen  232 SIANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFP----------YPPPNPPYLDIFELLCAIVDEPPP  300 (364)
T ss_pred             hhcccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCC----------CCCcCCCCCCHHHHHHHHhcCCCC
Confidence            421      22239999988 4799999999999988755443110          00112344556666555443 222


Q ss_pred             C-----CCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          256 M-----LTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       256 ~-----~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .     ++.+-..-+=.++..|+..|-+..+.+.+
T Consensus       301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            2     23333333444556666777777776654

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-39  Score=290.05  Aligned_cols=259  Identities=20%  Similarity=0.254  Sum_probs=216.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-   98 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-   98 (436)
                      ...+..+|..++.||+|+||.|+.|.++.||+.||||.+......  ....+...||+.+|+.+ +|+||+.+++++.. 
T Consensus        17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~--~~~akRtlRElklLr~~-~HeNIi~l~di~~p~   93 (359)
T KOG0660|consen   17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN--QIDAKRTLRELKLLRHL-RHENIIGLLDIFRPP   93 (359)
T ss_pred             EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc--hHHHHHHHHHHHHHHHh-cCCCcceEEeecccc
Confidence            344667788899999999999999999999999999998754432  35567789999999999 59999999999876 


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           99 ----ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        99 ----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                          -+.+|+|+|+++. +|.+.+++...+++..+..++.|++.||.|+|+.+|+||||||.|+++   +.+..+|||||
T Consensus        94 ~~~~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DF  169 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDF  169 (359)
T ss_pred             cccccceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccc
Confidence                2569999999965 999999888779999999999999999999999999999999999999   78889999999


Q ss_pred             CCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCC
Q 042392          175 GSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       175 G~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~  237 (436)
                      |+|+...+...          .+..|||++.....|+.+.||||+ +|++++++       +.+...++..+...+++++
T Consensus       170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv-GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~  248 (359)
T KOG0660|consen  170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV-GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS  248 (359)
T ss_pred             cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhh-hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence            99999864210          112299999999999999999999 99999987       5678889999888888765


Q ss_pred             C---CccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          238 N---GTLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       238 ~---g~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .   ..++.+....++++++           +..+...++.+-+++-.|++.||+-+|=+.+-
T Consensus       249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence            4   3455555666777654           24466677888888889999999999977653

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-40  Score=284.48  Aligned_cols=244  Identities=23%  Similarity=0.326  Sum_probs=187.9

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee-ee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS-AH   96 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-~~   96 (436)
                      ++......+|++.++||+|+||.||++.+..+|..+|.|.+.-....  ......+..|+.+|++| +|||||++++ .|
T Consensus        12 ~~~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md--~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f   88 (375)
T KOG0591|consen   12 SPPQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD--AKARQDCVKEISLLKQL-NHPNIVQYYAHSF   88 (375)
T ss_pred             CCCcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhcc--HHHHHHHHHHHHHHHhc-CCchHHHHHHHhh
Confidence            34555677899999999999999999999999999999998744332  45667788999999999 7999999998 55


Q ss_pred             ecCCe-EEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH--cC--cccccCCCCcceeeccCCCC
Q 042392           97 EDETA-VHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHS--MG--VMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        97 ~~~~~-~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~--~~--i~Hrdlkp~Nill~~~~~~~  167 (436)
                      ...+. ++||||||.+|+|.+.++..    ..++|..+|.++.|+|.||..+|.  .+  |+||||||.||++   +.+|
T Consensus        89 ~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~g  165 (375)
T KOG0591|consen   89 IEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANG  165 (375)
T ss_pred             hccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCC
Confidence            55555 99999999999999988752    459999999999999999999998  45  9999999999999   7899


Q ss_pred             cEEEEecCCcccccccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCC
Q 042392          168 LLKVTDFGSALLFEEEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      .+||+|||+++.+.+...-+        ..+||.+.. ..|+.+||+||+ +|++.++.             .+..+-.|
T Consensus       166 vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWsl-GCllyEMc-------------aL~~PF~g  230 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSL-GCLLYEMC-------------ALQSPFYG  230 (375)
T ss_pred             ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHH-HHHHHHHH-------------hcCCCccc
Confidence            99999999999987643221        228888876 689999999999 66665543             12223334


Q ss_pred             ccCHHHHHHHHHhcCCC-CC----HHHHHHHHH-HHcCCCCCcccHHHHH
Q 042392          240 TLSYDELRAGLTKVGSM-LT----EFDVKQLME-AADMDGNGAIDYTEFT  283 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~-~s----~~~i~~l~~-~~d~d~~g~i~~~EF~  283 (436)
                      . +..+|.+-+.+-..+ ++    ..++..+.. +++.|...+.+--.++
T Consensus       231 ~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  231 D-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             c-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence            4 566666666654432 22    233454444 3566777676643343

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.5e-39  Score=290.09  Aligned_cols=207  Identities=24%  Similarity=0.318  Sum_probs=179.9

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCC-eeeceeeeecCC--
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-IVELKSAHEDET--  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n-iv~~~~~~~~~~--  100 (436)
                      +..|..++.||+|+||+||+|+.+.+|+.||+|++......  ........||+.+|+.| +|+| |+++++++.+.+  
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~   86 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNH   86 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccc
Confidence            67788899999999999999999999999999999876542  23455678999999999 5999 999999998877  


Q ss_pred             ----eEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          101 ----AVHVVMELCQGGDLFDRIIAKG----YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       101 ----~~~iv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                          .+|+|+||++. +|..++...+    .++...++.+++||+.||.|||+++|+||||||+|||+   ++.|.+||+
T Consensus        87 ~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKla  162 (323)
T KOG0594|consen   87 RGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLA  162 (323)
T ss_pred             cccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeee
Confidence                89999999986 9999998865    47788999999999999999999999999999999999   779999999


Q ss_pred             ecCCcccccccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCC
Q 042392          173 DFGSALLFEEEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       173 DFG~a~~~~~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~  237 (436)
                      |||+|+.+.-+....        ..+||++.+...|+...|+||+ +|++++++       +..+.+++..+|+.+++++
T Consensus       163 DFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~-GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~  241 (323)
T KOG0594|consen  163 DFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSL-GCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN  241 (323)
T ss_pred             ccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhH-HHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence            999999765333221        2299999999999999999999 88888876       5667888888888888765


Q ss_pred             C
Q 042392          238 N  238 (436)
Q Consensus       238 ~  238 (436)
                      .
T Consensus       242 e  242 (323)
T KOG0594|consen  242 E  242 (323)
T ss_pred             c
Confidence            4

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.8e-39  Score=288.16  Aligned_cols=206  Identities=26%  Similarity=0.355  Sum_probs=175.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .+...-.|.-.+++|.|+||.||.|...++++.||||.+-.....+        .+|+++|+.+ +|||||++.-+|...
T Consensus        19 ~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--------nrEl~im~~l-~HpNIV~L~~~f~~~   89 (364)
T KOG0658|consen   19 GKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--------NRELQIMRKL-DHPNIVRLLYFFSSS   89 (364)
T ss_pred             CcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--------cHHHHHHHhc-CCcCeeeEEEEEEec
Confidence            3445567999999999999999999999999999999986654332        4899999999 799999998888643


Q ss_pred             C-----eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392          100 T-----AVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       100 ~-----~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      .     ...+||||+|. +|.+.++.    ..+++.-.++.+.+||++||.|||+.||+||||||+|+|+.  ...+.+|
T Consensus        90 ~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LK  166 (364)
T KOG0658|consen   90 TESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLK  166 (364)
T ss_pred             CCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEE
Confidence            2     35699999987 99999985    35689999999999999999999999999999999999994  3458999


Q ss_pred             EEecCCcccccccCCCCCC-------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCC
Q 042392          171 VTDFGSALLFEEEGGEASD-------DTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTD  236 (436)
Q Consensus       171 l~DFG~a~~~~~~~~~~~~-------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~  236 (436)
                      |||||.|+.+.......+.       |||.+.+...|+.+.|+||+ +|++++.+       +.+..+++..++..++.+
T Consensus       167 icDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSa-GCV~aELl~g~plFpG~s~~dQL~eIik~lG~P  245 (364)
T KOG0658|consen  167 ICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSA-GCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP  245 (364)
T ss_pred             eccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhh-hHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence            9999999999876665443       99999999999999999999 89999876       567788888888887765


Q ss_pred             CC
Q 042392          237 KN  238 (436)
Q Consensus       237 ~~  238 (436)
                      +.
T Consensus       246 t~  247 (364)
T KOG0658|consen  246 TR  247 (364)
T ss_pred             CH
Confidence            43

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=301.46  Aligned_cols=246  Identities=32%  Similarity=0.475  Sum_probs=191.1

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh-hHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ...++|.+.+.||+|+||+|+.|.+..++..||+|++.+....... .....+.+|+.+++.+..||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999999999999999987765322111 345667799999999955999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC-CcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN-ALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~kl~DFG~a~~  179 (436)
                      .+|+|||||.||+|++++.+.++++|..++.+++|++.|+.|||++||+||||||+|||+   +.+ +.+||+|||++..
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAI  170 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999   666 8999999999998


Q ss_pred             cc-cc-------CCCCCCChHHHHHHHHH-HHhhhhhhHHHHHHHhcC---ChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          180 FE-EE-------GGEASDDTSVILRMKQF-RRMSKLKKLTVKVIVEYL---PGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       180 ~~-~~-------~~~~~~~pe~~~~~~~~-~~~~d~~s~~~~~~~~~l---~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      .. ..       +..+..|||++.+...| ..++|+||+|+.++....   +.+. .....++..+..            
T Consensus       171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~------------  237 (370)
T KOG0583|consen  171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRK------------  237 (370)
T ss_pred             cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhc------------
Confidence            73 21       12233399999986635 589999999887755443   2222 112222222111            


Q ss_pred             HHHHhcCCCC-CHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          248 AGLTKVGSML-TEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       248 ~~l~~~~~~~-s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                       .--.+...+ +.+-...+-+.+..|+..+++..|.+.
T Consensus       238 -~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  238 -GEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             -CCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence             101122233 544455555667888888999998883

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-38  Score=303.54  Aligned_cols=247  Identities=27%  Similarity=0.398  Sum_probs=198.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.+-|++++.||.|+-|.|.+|++..||+.+|||++.+..... ......+.+||.+|+.+ .||||+++|++|++..++
T Consensus        10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s-~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~l   87 (786)
T KOG0588|consen   10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELS-SSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHL   87 (786)
T ss_pred             cccceeccccccCCCCceehhhhcccccceeEEEeeccccccc-cccccchhhhhHHHHHh-cCCCeeeeeeeeccCceE
Confidence            3456999999999999999999999999999999998774332 34566789999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|+||++||.|++++.+++++++.++.++++||+.|+.|||..+|+||||||+|+|+   +..+++||+|||+|..-.+
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccC
Confidence            9999999999999999999999999999999999999999999999999999999999   7777899999999986544


Q ss_pred             c-------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC
Q 042392          183 E-------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS  255 (436)
Q Consensus       183 ~-------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~  255 (436)
                      .       +....-+||++.|..+-+.++|+||-|+.+++-..+.=          -||-+ +=+.-....+.+.-.+..
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L----------PFdDd-Nir~LLlKV~~G~f~MPs  233 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL----------PFDDD-NIRVLLLKVQRGVFEMPS  233 (786)
T ss_pred             CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC----------CCCCc-cHHHHHHHHHcCcccCCC
Confidence            2       22223389999998777899999998776665433211          12211 101111112222223445


Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .++.+.=+.+.+++|.|+..+|+.+|.+++
T Consensus       234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  234 NISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            666666667778899999999999998876

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=275.95  Aligned_cols=190  Identities=28%  Similarity=0.396  Sum_probs=168.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .-.++|++++.||.|+||.|.+++++.+|..||+|++.+...-+ -...+...+|..+|+.+ .||+++++++.+.+.+.
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVk-lKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~  118 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVK-LKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSN  118 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHH-HHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCe
Confidence            45678999999999999999999999999999999998876554 44566788999999999 59999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||.+||.|+.++++.+++++..++.++.||+.|+.|||+++|++|||||+|||+   +.+|.+||+|||+|+...
T Consensus       119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVS  195 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEec
Confidence            99999999999999999999999999999999999999999999999999999999999   899999999999999886


Q ss_pred             ccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          182 EEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       182 ~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ...-+     -..|||++.. +.|..++|.|++|+.+ .+++
T Consensus       196 ~rT~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLI-YEMl  235 (355)
T KOG0616|consen  196 GRTWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLI-YEML  235 (355)
T ss_pred             CcEEEecCCccccChHHhhc-CCCCcchhHHHHHHHH-HHHH
Confidence            54222     2228888876 7899999999995544 4443

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-38  Score=286.29  Aligned_cols=189  Identities=31%  Similarity=0.480  Sum_probs=169.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+..-+|.+.+.||+|+||.|-+|.....|+.||||.+++..... ......++|||.||..| +||||+.+|++|+..
T Consensus        48 khnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvhIRREIeIMSsL-NHPhII~IyEVFENk  125 (668)
T KOG0611|consen   48 KHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVHIRREIEIMSSL-NHPHIIQIYEVFENK  125 (668)
T ss_pred             ccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHHHHHHHHHHhhc-CCCceeehhhhhcCC
Confidence            3456678999999999999999999998999999999998877655 55567799999999999 799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+.|||||..+|.|++++.+++.+++.+++.+++||++|+.|||+++++|||||.+|||+   +.++++||+|||++..
T Consensus       126 dKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNl  202 (668)
T KOG0611|consen  126 DKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNL  202 (668)
T ss_pred             ceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999   8899999999999988


Q ss_pred             ccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +....       .....+||++.|..+-.+.+|-||+|+.+
T Consensus       203 y~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLL  243 (668)
T KOG0611|consen  203 YADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLL  243 (668)
T ss_pred             hccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHH
Confidence            76532       22333899999876667889999987654

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.2e-37  Score=292.80  Aligned_cols=186  Identities=28%  Similarity=0.405  Sum_probs=167.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+.....  .....+++|++|++.| +|||||.++++|++..++|
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~--k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~   77 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE--KELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLW   77 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch--HHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEE
Confidence            478999999999999999999999999999999998876543  4567799999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|+|||.| +|+.++...+.++|+.++.+..+++.||.|||+.+|+|||+||+|||+   +.++.+|+||||+|+-+...
T Consensus        78 vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~  153 (808)
T KOG0597|consen   78 VVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTN  153 (808)
T ss_pred             EEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccC
Confidence            99999987 999999999999999999999999999999999999999999999999   88999999999999987653


Q ss_pred             C--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          184 G--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       184 ~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .        .....|||++.+ +.|+..+|+||+ +|++++.+
T Consensus       154 t~vltsikGtPlYmAPElv~e-~pyd~~sDlWsl-GcilYE~~  194 (808)
T KOG0597|consen  154 TSVLTSIKGTPLYMAPELVEE-QPYDHTSDLWSL-GCILYELY  194 (808)
T ss_pred             ceeeeeccCcccccCHHHHcC-CCccchhhHHHH-HHHHHHHh
Confidence            2        223338988875 789999999999 77777765

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.4e-37  Score=288.03  Aligned_cols=191  Identities=24%  Similarity=0.370  Sum_probs=168.7

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-.++|.++++||+|+||.||+|+-+.||..||+|++++..... ......++.|-.+|... ++|+||++|-.|++..
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~-~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~  214 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLK-KNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKE  214 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHh-hhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCC
Confidence            345678999999999999999999999999999999998876655 55667788999999996 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ++|+||||++||++..+|.+.+.+++..++.++.+++.|+.-||+.|+|||||||+|+||   +..|++||+|||+|..+
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchh
Confidence            999999999999999999999999999999999999999999999999999999999999   89999999999999654


Q ss_pred             cc-----------------------cCCC----C----------------------------CCChHHHHHHHHHHHhhh
Q 042392          181 EE-----------------------EGGE----A----------------------------SDDTSVILRMKQFRRMSK  205 (436)
Q Consensus       181 ~~-----------------------~~~~----~----------------------------~~~pe~~~~~~~~~~~~d  205 (436)
                      ..                       ....    .                            ..|||++.+. .|...+|
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k-gY~~~cD  370 (550)
T KOG0605|consen  292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK-GYGKECD  370 (550)
T ss_pred             hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC-CCCcccc
Confidence            22                       0000    0                            0199999985 5999999


Q ss_pred             hhhHHHHHHHhcC
Q 042392          206 LKKLTVKVIVEYL  218 (436)
Q Consensus       206 ~~s~~~~~~~~~l  218 (436)
                      .||+ +|++.+++
T Consensus       371 wWSL-G~ImyEmL  382 (550)
T KOG0605|consen  371 WWSL-GCIMYEML  382 (550)
T ss_pred             HHHH-HHHHHHHH
Confidence            9999 77777765

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-37  Score=282.21  Aligned_cols=248  Identities=23%  Similarity=0.280  Sum_probs=182.3

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----------hhHHHHHHHHHHHHHhcCCCCCee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----------AENDMMIRREIQIRRLLSGQPNIV   90 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~~h~niv   90 (436)
                      .....+|++++.||+|+||.|-+|++..+++.||||++.+......          ....+..++||.+|++| .|||||
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV  171 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVV  171 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCee
Confidence            3456789999999999999999999999999999999987644321          11235789999999999 699999


Q ss_pred             eceeeeecC--CeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           91 ELKSAHEDE--TAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        91 ~~~~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      +++++..++  +.+|||+|||..|.+.. ....++ +++.+++.+++.++.||.|||.+||+||||||.|+|+   +++|
T Consensus       172 ~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g  247 (576)
T KOG0585|consen  172 KLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDG  247 (576)
T ss_pred             EEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCC
Confidence            999999765  67999999999887743 222334 8999999999999999999999999999999999999   7889


Q ss_pred             cEEEEecCCccccccc-------------CCCCCCChHHHHHH---HHHHHhhhhhhHHHHHHHhcCChh--hHHHHHHH
Q 042392          168 LLKVTDFGSALLFEEE-------------GGEASDDTSVILRM---KQFRRMSKLKKLTVKVIVEYLPGE--ETQALKEK  229 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~-------------~~~~~~~pe~~~~~---~~~~~~~d~~s~~~~~~~~~l~~e--~~~~l~~~  229 (436)
                      ++||+|||.+......             +..+..|||.+.+.   ..-+.+.|+|++|+++++..++.-  --+....+
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l  327 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL  327 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence            9999999999876332             22233399998872   234578899999998766554211  11122233


Q ss_pred             hhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHH-HHHHHHcCCCCCcccHHHHHHH
Q 042392          230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVK-QLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       230 F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~-~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      |.++-.++.-+....|+            .++.+ .+.+.++.|.+.||+..+...+
T Consensus       328 ~~KIvn~pL~fP~~pe~------------~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  328 FDKIVNDPLEFPENPEI------------NEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             HHHHhcCcccCCCcccc------------cHHHHHHHHHHhhcChhheeehhhheec
Confidence            33333333322222111            12222 3444567888888888887665

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-36  Score=256.22  Aligned_cols=246  Identities=24%  Similarity=0.365  Sum_probs=193.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-.++|.+++.||+|.||.||.|+.+.++-.||+|++.+..... .....++.||++|...| .||||.++|++|.+..
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~-~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~   95 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILK-TQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSK   95 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHH-hcchhhhhheeEeeccc-CCccHHhhhhheeccc
Confidence            345678999999999999999999999999999999998776444 45667899999999999 5999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRII--AKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+|+++||.+.|+|+..+.  ...++++..++.++.|++.|+.|+|.++|+||||||+|+|+   +..+.+||+|||-+.
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV  172 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSV  172 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCcee
Confidence            9999999999999999999  45679999999999999999999999999999999999999   788899999999998


Q ss_pred             cccccCCCCCC------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC--ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          179 LFEEEGGEASD------DTSVILRMKQFRRMSKLKKLTVKVIVEYL--PGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       179 ~~~~~~~~~~~------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      .-........+      +||+..+ ..++..+|+|++|+-+.-..+  ++-+-+...+.+             ..+.+.=
T Consensus       173 ~~p~~kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY-------------krI~k~~  238 (281)
T KOG0580|consen  173 HAPSNKRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY-------------KRIRKVD  238 (281)
T ss_pred             ecCCCCceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH-------------HHHHHcc
Confidence            77543333222      7777766 578899999998654432222  111111122222             2222211


Q ss_pred             HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      -.+...++.+.-+.+...+-.++..++...|.+.+
T Consensus       239 ~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  239 LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            12334566666677777778888888888887765

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-35  Score=275.88  Aligned_cols=242  Identities=21%  Similarity=0.254  Sum_probs=192.8

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...|+..++.+++++.||+|.||.||+|.++.+ ..||+|.++....     ....+.+|+++|++| .|+|||++++++
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m-----~~~~f~~Ea~iMk~L-~H~~lV~l~gV~  270 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM-----SPEAFLREAQIMKKL-RHEKLVKLYGVC  270 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc-----ChhHHHHHHHHHHhC-cccCeEEEEEEE
Confidence            456788888899999999999999999998643 4799999976533     235678999999999 599999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ..++.+||||||++.|+|.++++.  .+.+...+...++.|||+|++||+++++|||||..+|||+   +++..+||+||
T Consensus       271 ~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDF  347 (468)
T KOG0197|consen  271 TKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDF  347 (468)
T ss_pred             ecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEccc
Confidence            998999999999999999999997  3458999999999999999999999999999999999999   78889999999


Q ss_pred             CCcccccccCCCCC---------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          175 GSALLFEEEGGEAS---------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       175 G~a~~~~~~~~~~~---------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+|+...++.....         .|||.+.. ..|+.+||+||+|+.+ .            ++|.. ...+-+..+..+
T Consensus       348 GLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL-~------------E~fT~-G~~py~~msn~e  412 (468)
T KOG0197|consen  348 GLARLIGDDEYTASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLL-W------------ELFTY-GRVPYPGMSNEE  412 (468)
T ss_pred             ccccccCCCceeecCCCCCCceecCHHHHhh-CCcccccceeehhhhH-H------------HHhcc-CCCCCCCCCHHH
Confidence            99996655433322         29999886 5699999999995543 3            34433 445555567777


Q ss_pred             HHHHHHh---cC-C-CCCHHHHHHHHHHHcCCCCCcccHHHHH
Q 042392          246 LRAGLTK---VG-S-MLTEFDVKQLMEAADMDGNGAIDYTEFT  283 (436)
Q Consensus       246 L~~~l~~---~~-~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~  283 (436)
                      +...+.+   +. + ..+.+-.+.|..+...++..|.+|....
T Consensus       413 v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  413 VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            7666654   22 2 2233334445556678899999998433

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=286.17  Aligned_cols=210  Identities=22%  Similarity=0.271  Sum_probs=177.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-----CCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-----PNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~~~~   94 (436)
                      .+.+..+|.+.++||+|+||.|-+|.+..|++.||||+++...     ....+...|+.+|..|.+|     -|||++++
T Consensus       181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d  255 (586)
T KOG0667|consen  181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLD  255 (586)
T ss_pred             cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeee
Confidence            4556668999999999999999999999999999999997653     3445667899999999633     58999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +|..++++|||+|++.. +|+++++...  .++...++.++.||+.||.+||+.+|||+|||||||||.... ...|||+
T Consensus       256 ~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVI  333 (586)
T KOG0667|consen  256 YFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVI  333 (586)
T ss_pred             ccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEE
Confidence            99999999999999976 9999999864  489999999999999999999999999999999999997644 4489999


Q ss_pred             ecCCcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC
Q 042392          173 DFGSALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       173 DFG~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~  238 (436)
                      |||.|......-..     ...|||+++|. +|+.+.||||+ +|++++.+       +..+.+++..+-+.++.++.
T Consensus       334 DFGSSc~~~q~vytYiQSRfYRAPEVILGl-pY~~~IDmWSL-GCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~  409 (586)
T KOG0667|consen  334 DFGSSCFESQRVYTYIQSRFYRAPEVILGL-PYDTAIDMWSL-GCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP  409 (586)
T ss_pred             ecccccccCCcceeeeeccccccchhhccC-CCCCccceeeh-hhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence            99999876553321     12299999995 79999999999 89999976       56677777777776665543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-35  Score=281.05  Aligned_cols=191  Identities=27%  Similarity=0.374  Sum_probs=166.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-.++|+++++||+|+||+|++|..+.+++.||||++++...-. ....+....|..|+....+||.++.++..|+++.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE  442 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence            445678999999999999999999999999999999999887665 5567788999999998878999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ++|.||||+.||++. .++..+.+++..++.|+..|+.||.|||++|||+||||.+|||+   +..|++||+|||+++.-
T Consensus       443 ~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~  518 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEG  518 (694)
T ss_pred             eEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEeccccccccc
Confidence            999999999999954 34445679999999999999999999999999999999999999   89999999999999987


Q ss_pred             cccCCCCCC--------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          181 EEEGGEASD--------DTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       181 ~~~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ...+..+++        |||++.+ ..|+.++|.|++|+ ++.+++
T Consensus       519 m~~g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGV-LlyeML  562 (694)
T KOG0694|consen  519 MGQGDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGV-LLYEML  562 (694)
T ss_pred             CCCCCccccccCChhhcChhhhcc-CcccchhhHHHHHH-HHHHHH
Confidence            644444333        9999988 57999999999954 444444

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.7e-35  Score=259.91  Aligned_cols=259  Identities=21%  Similarity=0.281  Sum_probs=197.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTN----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....|+++..||+|+||.||+|..+.++    +.+|||.++.....  ........||+.+++.+ +||||+.+..+|..
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~--tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG--TGISMSACREIALLREL-KHPNVISLVKVFLS   98 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC--CCcCHHHHHHHHHHHHh-cCCcchhHHHHHhc
Confidence            4457999999999999999999765543    37999998765332  23445678999999999 69999999999987


Q ss_pred             -CCeEEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-CCCCcEEE
Q 042392           99 -ETAVHVVMELCQGGDLFDRIIAK-----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-DDNALLKV  171 (436)
Q Consensus        99 -~~~~~iv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-~~~~~~kl  171 (436)
                       +..+|+++||.+. +|++.|.-.     ..++...++.++.||+.|+.|||++=|+||||||.|||+... .+.|.|||
T Consensus        99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence             7889999999998 999999753     348889999999999999999999999999999999999642 34589999


Q ss_pred             EecCCcccccccCCCCC-----------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCC----------------hhhHH
Q 042392          172 TDFGSALLFEEEGGEAS-----------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLP----------------GEETQ  224 (436)
Q Consensus       172 ~DFG~a~~~~~~~~~~~-----------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~----------------~e~~~  224 (436)
                      +|||+|+.+...-....           .|||.++|.+.|+++.|+|++ +|++++.++                +-+..
T Consensus       178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAi-GCIfaElLtl~PlF~g~E~k~~~~~Pfq~d  256 (438)
T KOG0666|consen  178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAI-GCIFAELLTLEPLFKGREEKIKTKNPFQHD  256 (438)
T ss_pred             ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHH-HHHHHHHHccCccccchhhhcccCCCchHH
Confidence            99999999876544321           299999999999999999999 899998762                34567


Q ss_pred             HHHHHhhhhCCCCCCc-------cCH-HHHHH-------------HHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHH
Q 042392          225 ALKEKFIEMDTDKNGT-------LSY-DELRA-------------GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT  283 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~-------i~~-~eL~~-------------~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~  283 (436)
                      ++.++|..++.+.+..       ... ..+..             ++..... -+....+.+.+.+..|+-.+|+-++-+
T Consensus       257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~-k~~~a~~LL~klL~yDP~kRIta~qAl  335 (438)
T KOG0666|consen  257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKV-KDPSALDLLQKLLTYDPIKRITAEQAL  335 (438)
T ss_pred             HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcC-CCchHHHHHHHHhccCchhhccHHHHh
Confidence            8888898887665532       112 11111             1111111 122256666777777777777776665


Q ss_pred             HHHH
Q 042392          284 AATI  287 (436)
Q Consensus       284 ~~~~  287 (436)
                      ...+
T Consensus       336 eh~y  339 (438)
T KOG0666|consen  336 EHPY  339 (438)
T ss_pred             cccc
Confidence            5443

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=276.49  Aligned_cols=192  Identities=44%  Similarity=0.709  Sum_probs=167.8

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+...|.+.+.||+|.||.||+|+++.||+.+|+|++.+..... ......+.+|+++|+.+++|||||.++++|++
T Consensus        29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~-~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG-KEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc-cccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            45678889999999999999999999999999999999998876543 23456899999999999669999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC-CCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~-~~~~kl~DFG~a  177 (436)
                      ...+|+|||+|.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+..... .+.+|++|||+|
T Consensus       108 ~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla  186 (382)
T KOG0032|consen  108 PDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA  186 (382)
T ss_pred             CCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence            99999999999999999999887 4999999999999999999999999999999999999976543 458999999999


Q ss_pred             ccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          178 LLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       178 ~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........       ....|||++.. ..|+..+|+||+|+..
T Consensus       187 ~~~~~~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~  228 (382)
T KOG0032|consen  187 KFIKPGERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVIL  228 (382)
T ss_pred             eEccCCceEeeecCCccccCchhhcC-CCCCcccchhHHHHHH
Confidence            98876211       11228999876 5899999999986544

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-34  Score=260.85  Aligned_cols=251  Identities=21%  Similarity=0.290  Sum_probs=197.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .+..-.+.|.+.++||.|.-++||+|+...++..||||++.......   ....+++|++.|..+ +||||++++..|..
T Consensus        20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~---~ld~l~kE~~~msl~-~HPNIv~~~~sFvv   95 (516)
T KOG0582|consen   20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN---DLDALRKEVQTMSLI-DHPNIVTYHCSFVV   95 (516)
T ss_pred             cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh---hHHHHHHHHHHhhhc-CCCCcceEEEEEEe
Confidence            34455678999999999999999999999999999999998776543   367899999999999 79999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      +..+|+||.|+.+|++.++++..-  .++|..+..++++++.||.|||++|.||||||+.|||+   +.+|.|||+|||.
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgv  172 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGV  172 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCcee
Confidence            999999999999999999999853  39999999999999999999999999999999999999   8999999999998


Q ss_pred             cccccccCCC------------CCCChHH-HHHHHHHHHhhhhhhHHHHHHHh---cCChhhHHHHHHHhhhhCCCCC--
Q 042392          177 ALLFEEEGGE------------ASDDTSV-ILRMKQFRRMSKLKKLTVKVIVE---YLPGEETQALKEKFIEMDTDKN--  238 (436)
Q Consensus       177 a~~~~~~~~~------------~~~~pe~-~~~~~~~~~~~d~~s~~~~~~~~---~l~~e~~~~l~~~F~~~D~~~~--  238 (436)
                      +..+...+..            ...+||+ ......|+.++||||+|++.+--   ..+......++-+...+..++.  
T Consensus       173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~  252 (516)
T KOG0582|consen  173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTL  252 (516)
T ss_pred             eeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCc
Confidence            8776553311            1119999 55667899999999998877533   2345555555555555554443  


Q ss_pred             --CccCHHHHHHHHHhcCCCCCHHHHHHHHH-HHcCCCCCcccHHHHHHH
Q 042392          239 --GTLSYDELRAGLTKVGSMLTEFDVKQLME-AADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 --g~i~~~eL~~~l~~~~~~~s~~~i~~l~~-~~d~d~~g~i~~~EF~~~  285 (436)
                        +.++.++.+..    +.     ....+.. +++.|+..|.+=.+.+++
T Consensus       253 ~t~~~~~d~~k~~----~k-----sf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  253 LTSGLDKDEDKKF----SK-----SFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             ccccCChHHhhhh----cH-----HHHHHHHHHhhcCcccCCCHHHHhcc
Confidence              23444443332    11     2333333 456677777777776655

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-36  Score=256.18  Aligned_cols=250  Identities=26%  Similarity=0.409  Sum_probs=195.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-.+.+.|.+-++||+|.|+.|++|.+..||+.+|+|++.......  ...+.+.+|+.|.+.| +||||+++.+.+...
T Consensus         6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~--~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~   82 (355)
T KOG0033|consen    6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQKLEREARICRKL-QHPNIVRLHDSIQEE   82 (355)
T ss_pred             ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc--ccHHHHHHHHHHHHhc-CCCcEeehhhhhccc
Confidence            3456788999999999999999999999999999999987654433  3556789999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +..|+|+|++.|++|..-|..+-.++|..+..+++||+++|.|||.+||||||+||+|+++.+++...-+||+|||+|..
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            99999999999999988777767799999999999999999999999999999999999999888888899999999998


Q ss_pred             ccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHh---cC--ChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          180 FEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVE---YL--PGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       180 ~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~---~l--~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +.....       ....+||++.. .+|+.++|+|+-|+.++.-   .+  ..+....+.+-...-+-+-++.       
T Consensus       163 l~~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~-------  234 (355)
T KOG0033|consen  163 VNDGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSP-------  234 (355)
T ss_pred             eCCccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCc-------
Confidence            873211       11128888876 5899999999987765432   32  2333444443332222222221       


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          . -...+++.=+.+-+++..|+..+|+-.|-+++
T Consensus       235 ----~-w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  235 ----E-WDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             ----c-cCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence                1 12345444445556778889999998887754

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-34  Score=263.24  Aligned_cols=243  Identities=28%  Similarity=0.363  Sum_probs=184.2

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--e
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--A  101 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--~  101 (436)
                      ..+|...+.||+|+||.||++.+..+|..+|||.+.....    .....+.+|+.+|+.|. |||||++++......  .
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDE   90 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCee
Confidence            4568999999999999999999999999999999876521    12567899999999995 999999999855544  6


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC-CCcEEEEecCCccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSALL  179 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~-~~~~kl~DFG~a~~  179 (436)
                      +++.|||+++|+|.+++.+.+ ++++..++.+.+||+.||.|||++||+||||||+|||+   +. ++.+||+|||+|+.
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~  167 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKK  167 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCccccc
Confidence            999999999999999999977 79999999999999999999999999999999999999   66 68999999999987


Q ss_pred             ccc--c---------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh-hhHHH----HHHHhhhhCCCCCCccCH
Q 042392          180 FEE--E---------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQA----LKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       180 ~~~--~---------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~-e~~~~----l~~~F~~~D~~~~g~i~~  243 (436)
                      ...  .         +.....+||++.....-.+++|+||+ +|.+.++++. ..+..    ...+|...-.+   .   
T Consensus       168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSl-GCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~---~---  240 (313)
T KOG0198|consen  168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSL-GCTVVEMLTGKPPWSEFFEEAEALLLIGRED---S---  240 (313)
T ss_pred             cccccccccccccccCCccccCchhhcCCCcCCccchhhhc-CCEEEeccCCCCcchhhcchHHHHHHHhccC---C---
Confidence            763  1         11112299999851112249999999 6666666642 21111    11222111111   0   


Q ss_pred             HHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          244 DELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       244 ~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                            ...+...++.+.-+-+.+.+..+...|.+..|.+.+..
T Consensus       241 ------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  241 ------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             ------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence                  01223345666666677778888888888888876643

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.4e-33  Score=261.81  Aligned_cols=252  Identities=20%  Similarity=0.230  Sum_probs=183.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||.|+||.||+|++..++..||+|++......   .....+.+|+.+++.+ +||||+++++++...+..|
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   79 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLT   79 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEE
Confidence            46799999999999999999999999999999998654321   2234577999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++....
T Consensus        80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~  155 (288)
T cd07871          80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSV  155 (288)
T ss_pred             EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccC
Confidence            99999986 9999987654 47899999999999999999999999999999999999   7788999999999976543


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC----CccCH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN----GTLSY  243 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~----g~i~~  243 (436)
                      ...        ....+||.+.+...|+.++|+||+|+.+ .+.+       +......+..++..+..+..    +..+.
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07871         156 PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL-YEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN  234 (288)
T ss_pred             CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence            221        1123899887766788999999995544 3332       11222333333333322221    11112


Q ss_pred             HHHHHHHH---------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          244 DELRAGLT---------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       244 ~eL~~~l~---------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      +++...+.         ......+.+..+.+-+++..|+..|++..|.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            22221110         011233445555565666777777777777653

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=267.54  Aligned_cols=195  Identities=29%  Similarity=0.384  Sum_probs=169.9

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |+..-....|.+=|.+.+.||+|-|..|.+|++.-||..||||++.+.....  .....+..|+..|+.+ +|||||++|
T Consensus         7 ~~g~i~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~--~st~hlfqEVRCMKLV-QHpNiVRLY   83 (864)
T KOG4717|consen    7 KRGHIYDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT--LSTGHLFQEVRCMKLV-QHPNIVRLY   83 (864)
T ss_pred             ccccccccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch--hhhhHHHHHHHHHHHh-cCcCeeeee
Confidence            3434445668888999999999999999999999999999999998876654  4456789999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      ++..+...+|+|+|+-++|+|+++|.++. .+.+..++.+++||+.|+.|||+..+|||||||+|+.+.  ..-|.|||.
T Consensus        84 EViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLT  161 (864)
T KOG4717|consen   84 EVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLT  161 (864)
T ss_pred             ehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEee
Confidence            99999999999999999999999998763 499999999999999999999999999999999999875  456899999


Q ss_pred             ecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |||++..+.+...       .+..|||+++|-.+-.+++||||+|+.+
T Consensus       162 DFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVIL  209 (864)
T KOG4717|consen  162 DFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVIL  209 (864)
T ss_pred             eccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHH
Confidence            9999998876433       2334999999976666889999986654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-35  Score=236.69  Aligned_cols=205  Identities=23%  Similarity=0.310  Sum_probs=174.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|...+.||+|+||+||+|++..+++.||+|.++......  ......+|||-+++.| +|.|||+++++....+.+-+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde--gvpssalreicllkel-khknivrl~dvlhsdkkltl   78 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC--CCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEE
Confidence            46778899999999999999999999999999998765442  4566789999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |+|||.- +|..+..+- +.++...++.++.|++.||.|+|+++++||||||+|.|+   +.+|.+|++|||+|+-+.-+
T Consensus        79 vfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgip  154 (292)
T KOG0662|consen   79 VFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             eHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCc
Confidence            9999975 998888774 568999999999999999999999999999999999999   78999999999999876432


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC--------ChhhHHHHHHHhhhhCCCC
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL--------PGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--------~~e~~~~l~~~F~~~D~~~  237 (436)
                      -.        ....+|.++.+.+-|+...|+||. +|++++.-        +.+-.+++.++|..++.+.
T Consensus       155 vrcysaevvtlwyrppdvlfgakly~tsidmwsa-gcifaelanagrplfpg~dvddqlkrif~~lg~p~  223 (292)
T KOG0662|consen  155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA-GCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT  223 (292)
T ss_pred             eEeeeceeeeeeccCcceeeeeehhccchHhhhc-chHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence            21        122388899999999999999998 78887743        3445567777777766543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-33  Score=263.35  Aligned_cols=183  Identities=25%  Similarity=0.346  Sum_probs=157.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l   78 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR-LKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYM   78 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-hHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEE
Confidence            47999999999999999999999999999999986543221 22345688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~  155 (291)
T cd05612          79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT  155 (291)
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCc
Confidence            99999999999999988889999999999999999999999999999999999999   678899999999998765432


Q ss_pred             C-----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 G-----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .     ....+||.+.+ ..++.++|+||+|+++
T Consensus       156 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  188 (291)
T cd05612         156 WTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILI  188 (291)
T ss_pred             ccccCChhhcCHHHHcC-CCCCchhhHHHHHHHH
Confidence            1     12238988765 4578899999995544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=9e-34  Score=270.68  Aligned_cols=187  Identities=27%  Similarity=0.374  Sum_probs=160.8

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK-MKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDEN   91 (329)
T ss_pred             CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCC
Confidence            344678999999999999999999999999999999987543222 23345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEc
Confidence            999999999999999999988889999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......     ...+||.+.+ ..++.++|+||+|+++
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  205 (329)
T PTZ00263        169 PDRTFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLL  205 (329)
T ss_pred             CCCcceecCChhhcCHHHHcC-CCCCCcceeechHHHH
Confidence            543221     1238888875 4578899999995544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-33  Score=265.00  Aligned_cols=185  Identities=23%  Similarity=0.259  Sum_probs=156.4

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCce-EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMP-YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ........+.+.||+|+||+||+|.+.  |.. ||||++.......  .....+.+|+.+|..+ +|||||++++++..+
T Consensus        37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~--~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~  111 (362)
T KOG0192|consen   37 EIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDD--ESRKAFRREASLLSRL-RHPNIVQFYGACTSP  111 (362)
T ss_pred             ecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcCh--HHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence            333445667778999999999999986  444 9999997765443  2267899999999999 699999999999988


Q ss_pred             C-eEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-cccccCCCCcceeeccCCCC-cEEEEec
Q 042392          100 T-AVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMG-VMHRDLKPENFCFISRDDNA-LLKVTDF  174 (436)
Q Consensus       100 ~-~~~iv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~Hrdlkp~Nill~~~~~~~-~~kl~DF  174 (436)
                      . .+.|||||+++|+|.+++..  ...++...+..++.+|+.|+.|||+++ ||||||||+|||+   +.++ ++||+||
T Consensus       112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DF  188 (362)
T KOG0192|consen  112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADF  188 (362)
T ss_pred             CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCC
Confidence            7 79999999999999999988  567999999999999999999999999 9999999999999   6776 9999999


Q ss_pred             CCcccccccC--C------CCCCChHHHHH-HHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEG--G------EASDDTSVILR-MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~--~------~~~~~pe~~~~-~~~~~~~~d~~s~~~~~  213 (436)
                      |+++......  .      ....|||++.+ ...|+.++|+||+|+++
T Consensus       189 Glsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl  236 (362)
T KOG0192|consen  189 GLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL  236 (362)
T ss_pred             ccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH
Confidence            9998776431  1      11229999986 36799999999996654

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.1e-33  Score=273.82  Aligned_cols=184  Identities=23%  Similarity=0.380  Sum_probs=157.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE-KEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEE
Confidence            47999999999999999999999999999999997543222 23345678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+....
T Consensus        79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~  155 (363)
T cd05628          79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAH  155 (363)
T ss_pred             EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCcccccccc
Confidence            99999999999999988889999999999999999999999999999999999999   778899999999987543210


Q ss_pred             -------------------------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 -------------------------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 -------------------------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                                                                 .....|||++.+ ..|+.++|+||+|++++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~  227 (363)
T cd05628         156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMY  227 (363)
T ss_pred             cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHH
Confidence                                                       111228998876 46888999999965543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.4e-33  Score=264.97  Aligned_cols=187  Identities=26%  Similarity=0.334  Sum_probs=159.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK-LNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEE
Confidence            36999999999999999999999999999999997643221 23345678899999999 59999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+|.......
T Consensus        79 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~~  155 (333)
T cd05600          79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTYA  155 (333)
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccccc
Confidence            99999999999999888889999999999999999999999999999999999999   778899999999998764421


Q ss_pred             C-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          185 G-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       185 ~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .     ....+||.+.+. .|+.++|+||+|++ +.+.+
T Consensus       156 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~i-l~ell  192 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCM-LYEFL  192 (333)
T ss_pred             CCcccCccccChhHhcCC-CCCCccceecchHH-Hhhhh
Confidence            1     122389988764 78899999999544 44433

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-33  Score=270.76  Aligned_cols=187  Identities=25%  Similarity=0.427  Sum_probs=158.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|++..+++.||||++....... ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~l   78 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE-KEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYL   78 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEE
Confidence            47999999999999999999999999999999997543221 23445678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |||||++|+|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.++|+|||++..+....
T Consensus        79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~  155 (364)
T cd05599          79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSH  155 (364)
T ss_pred             EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccc
Confidence            99999999999999988889999999999999999999999999999999999999   788899999999987643211


Q ss_pred             ----------------------------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          185 ----------------------------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       185 ----------------------------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                                                                    .....|||++.+ ..|+.++|+||+|+ ++.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~-il~el~  233 (364)
T cd05599         156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGV-IMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchh-HHHHhh
Confidence                                                          112238888765 46788999999954 444443

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=8.6e-33  Score=269.26  Aligned_cols=149  Identities=28%  Similarity=0.408  Sum_probs=136.1

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|++++.||+|+||.||+|++..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN-RNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEE
Confidence            6899999999999999999999999999999997653322 23455688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ||||+||+|.+++.+.+.+++..++.++.||+.||.|||+.||+||||||+|||+   +..+.+||+|||++..
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~  150 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTG  150 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCcc
Confidence            9999999999999988889999999999999999999999999999999999999   7788999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-33  Score=267.19  Aligned_cols=258  Identities=19%  Similarity=0.222  Sum_probs=199.7

Q ss_pred             ccccccccccccccccceeeeeeecccCCeEEEEEEECCCCc---e-EEEEEeecCCccchhhHHHHHHHHHHHHHhcCC
Q 042392           10 RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNM---P-YACKSMAKKPKMKYAENDMMIRREIQIRRLLSG   85 (436)
Q Consensus        10 ~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   85 (436)
                      ....|+.+..|+...++-.+.+.||+|+||.||+|+.+..+.   . ||+|......... ......+.+|.++|+++ +
T Consensus       142 ~L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~-~~~~~e~m~EArvMr~l-~  219 (474)
T KOG0194|consen  142 FLKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELT-KEQIKEFMKEARVMRQL-N  219 (474)
T ss_pred             eecccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccccccc-HHHHHHHHHHHHHHHhC-C
Confidence            346899999999999999999999999999999998765422   3 8999887533222 45677899999999999 7


Q ss_pred             CCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        86 h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      |||||++||+.....++|+|||+|+||+|.++|++.+. ++..+...++.+.+.||.|||+++++||||-.+|+|+   .
T Consensus       220 H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~  296 (474)
T KOG0194|consen  220 HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---S  296 (474)
T ss_pred             CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---c
Confidence            99999999999999999999999999999999999874 9999999999999999999999999999999999999   6


Q ss_pred             CCCcEEEEecCCcccccccC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC
Q 042392          165 DNALLKVTDFGSALLFEEEG--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD  236 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~  236 (436)
                      .++.+||+|||+|+.-....        +....|||.+... -|+.++|+|++|+.+.             ++|.....+
T Consensus       297 ~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~-------------Eif~~g~~P  362 (474)
T KOG0194|consen  297 KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLW-------------EIFENGAEP  362 (474)
T ss_pred             CCCeEEeCccccccCCcceeeccccccCcceecChhhhccC-ccccccchhheeeeEE-------------eeeccCCCC
Confidence            66788999999998654211        1112289999875 8999999999855432             333322222


Q ss_pred             CCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHH-HHcCCCCCcccHHHHHHHHH
Q 042392          237 KNGTLSYDELRAGLTKV-----GSMLTEFDVKQLME-AADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~-~~d~d~~g~i~~~EF~~~~~  287 (436)
                      -.| ....++...+..-     -+.-...++..+++ .+..+++.|.++.+....+.
T Consensus       363 y~g-~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~  418 (474)
T KOG0194|consen  363 YPG-MKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE  418 (474)
T ss_pred             CCC-CCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence            233 3334555544221     12234455555555 45678888999998887654

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.5e-34  Score=268.73  Aligned_cols=184  Identities=29%  Similarity=0.410  Sum_probs=161.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe-E
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA-V  102 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~  102 (436)
                      +++|..++++|+|+||.++.++++..+..|++|.+.......  .......+|+.+++++ .|||||.+.+.|..++. +
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~--~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE--PERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc--hhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceE
Confidence            578999999999999999999999999999999998765543  3334778999999999 69999999999998888 9


Q ss_pred             EEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 HVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|||+||+||+|.+.+.+..  .+++..+..|+.|++.|+.|||+.+|+|||||+.||++   +.++.|||.|||+|+.+
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhc
Confidence            99999999999999998764  49999999999999999999999999999999999999   77788999999999999


Q ss_pred             cccCCCCC--------CChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGGEAS--------DDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~~~~--------~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .+....+.        ..||.+.+ .+|..++|+|++|.|+.
T Consensus       157 ~~~~~~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~y  197 (426)
T KOG0589|consen  157 NPEDSLASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLY  197 (426)
T ss_pred             CCchhhhheecCCCcccCHHHhCC-CCCCccCcchhhcchHH
Confidence            87652221        17787777 58999999999955443

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=4.2e-33  Score=266.82  Aligned_cols=193  Identities=25%  Similarity=0.349  Sum_probs=161.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTN-MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ......++|++.+.||+|+||.||+|.+..++ ..||+|++.+..... ......+.+|+.+++.+ +||||+++++++.
T Consensus        24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~  101 (340)
T PTZ00426         24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK-QKQVDHVFSERKILNYI-NHPFCVNLYGSFK  101 (340)
T ss_pred             CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhC-CCCCCcceEEEEE
Confidence            44556678999999999999999999976654 689999986543222 23345678999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ..+.+|+||||+++|+|.+++.+.+.+++..+..++.|++.||.|||+.||+||||||+|||+   +.++.+||+|||+|
T Consensus       102 ~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a  178 (340)
T PTZ00426        102 DESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFA  178 (340)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCC
Confidence            999999999999999999999988889999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          178 LLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       178 ~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .........     ...|||++.+ ..++.++|+||+|+. +.+.+
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi-l~ell  222 (340)
T PTZ00426        179 KVVDTRTYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIF-IYEIL  222 (340)
T ss_pred             eecCCCcceecCChhhcCHHHHhC-CCCCccccccchhhH-HHHHh
Confidence            876542211     2238998876 457889999999544 44433

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2e-32  Score=262.56  Aligned_cols=246  Identities=19%  Similarity=0.227  Sum_probs=176.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      |....++|++.+.||+|+||.||+|.+.     .+++.||||++.....   ......+.+|+.+++.+.+||||+++++
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~   78 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT---ASEHKALMSELKILIHIGNHLNVVNLLG   78 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc---hHHHHHHHHHHHHHHHhccCcceeeEEe
Confidence            3445678999999999999999999752     3467899999864422   2334568899999999966999999999


Q ss_pred             eeecC-CeEEEEEeccCCCChHHHHHHc----------------------------------------------------
Q 042392           95 AHEDE-TAVHVVMELCQGGDLFDRIIAK----------------------------------------------------  121 (436)
Q Consensus        95 ~~~~~-~~~~iv~e~~~~g~L~~~l~~~----------------------------------------------------  121 (436)
                      ++... ..+|+|||||++|+|.+++...                                                    
T Consensus        79 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T cd05102          79 ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN  158 (338)
T ss_pred             EecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence            88764 4689999999999999998753                                                    


Q ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC------
Q 042392          122 ----------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG------  185 (436)
Q Consensus       122 ----------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~------  185 (436)
                                .++++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+.......      
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~  235 (338)
T cd05102         159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGS  235 (338)
T ss_pred             cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccC
Confidence                      236677888999999999999999999999999999999   6778999999999986532111      


Q ss_pred             ----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC--ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cC
Q 042392          186 ----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL--PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VG  254 (436)
Q Consensus       186 ----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~  254 (436)
                          ....+||.+.+ ..|+.++|+||+|++++ +.+  +...       |       .+.....++...+..     ..
T Consensus       236 ~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~-el~~~g~~p-------f-------~~~~~~~~~~~~~~~~~~~~~~  299 (338)
T cd05102         236 ARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLW-EIFSLGASP-------Y-------PGVQINEEFCQRLKDGTRMRAP  299 (338)
T ss_pred             CCCCccccCcHHhhc-CCCCcccCHHHHHHHHH-HHHhCCCCC-------C-------CCCCccHHHHHHHhcCCCCCCC
Confidence                12338998865 46889999999966543 322  1000       0       010011112121111     11


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       255 ~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...+..-.+.+.+++..|++.|+++.|.+..+.
T Consensus       300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~  332 (338)
T cd05102         300 ENATPEIYRIMLACWQGDPKERPTFSALVEILG  332 (338)
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            122333344455567788999999999887654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-33  Score=272.97  Aligned_cols=150  Identities=27%  Similarity=0.442  Sum_probs=136.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++++.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~l   78 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFK-KDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYL   78 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEE
Confidence            47999999999999999999999999999999986543222 23445678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      |||||+||+|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.+||+|||+|+.
T Consensus        79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~  150 (377)
T cd05629          79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTG  150 (377)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeecccccc
Confidence            99999999999999888889999999999999999999999999999999999999   6788999999999963

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.1e-32  Score=262.64  Aligned_cols=181  Identities=28%  Similarity=0.364  Sum_probs=152.8

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+|+.||||++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~   78 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence            46999999999999999999999999997543222 23345678899999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC------
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+......      
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~  155 (323)
T cd05571          79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCcccce
Confidence            99999999888889999999999999999999999999999999999999   778899999999987543221      


Q ss_pred             --CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          185 --GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       185 --~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                        .....+||.+.+ ..|+.++|+||+|+++ .+.+
T Consensus       156 ~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il-~ell  189 (323)
T cd05571         156 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVM-YEMM  189 (323)
T ss_pred             ecCccccChhhhcC-CCCCccccCcccchhh-hhhh
Confidence              112238998865 4688999999995544 4433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=5.5e-33  Score=265.81  Aligned_cols=189  Identities=24%  Similarity=0.386  Sum_probs=158.2

Q ss_pred             ceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +|++.+.||+|+||.||+|++.   .+++.||+|++.+............+.+|+.+++.+.+||||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999998864   4789999999875433222334456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCccccc
Confidence            9999999999999999888889999999999999999999999999999999999999   7788999999999986533


Q ss_pred             cCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          183 EGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       183 ~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ...         ....+||.+.+...++.++|+||+|+ ++.+.+
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~-il~ell  201 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI-LIFELL  201 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchh-hhhhhh
Confidence            211         11238999876556788999999954 444444

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=7.7e-33  Score=269.33  Aligned_cols=150  Identities=27%  Similarity=0.426  Sum_probs=135.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++++.||+|+||.||+|++..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++.+...+.+|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~l   78 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM-RNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYF   78 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh-hhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEE
Confidence            37999999999999999999999999999999986543221 22345678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      |||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|..
T Consensus        79 v~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~  150 (376)
T cd05598          79 VMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTG  150 (376)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCcc
Confidence            99999999999999988889999999999999999999999999999999999999   7788999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.6e-32  Score=257.75  Aligned_cols=183  Identities=20%  Similarity=0.249  Sum_probs=154.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|++..+++.||||++......   .....+.+|+.+++.+ +||||+++++++.....+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   79 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLT   79 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEE
Confidence            46899999999999999999999999999999998754322   2234567899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||++ ++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.+||+|||+|.....
T Consensus        80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          80 LVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSV  155 (303)
T ss_pred             EEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccC
Confidence            9999996 4888888764 458999999999999999999999999999999999999   6788999999999875432


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....|||++.+...|+.++|+||+|+.++
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  195 (303)
T cd07869         156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFV  195 (303)
T ss_pred             CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHH
Confidence            211        12238999877667888999999965543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-33  Score=246.74  Aligned_cols=242  Identities=26%  Similarity=0.396  Sum_probs=182.3

Q ss_pred             cccceee-eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           23 VMLHYSF-GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        23 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      +.++|++ -++||-|-.|.|-.|.++.||+.+|+|++...         ...+||+++.-..+.|||||+++++|++.  
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS---------PKARREVELHWMASGHPHIVSIIDVYENSYQ  129 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC---------HHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence            6778888 57899999999999999999999999998543         24568888877777899999999998753  


Q ss_pred             --CeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 --TAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 --~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                        ..+.+|||.++||.|+..++.++.  ++|.++..|++||+.|+.|||+.+|.||||||+|+|..+...+..+||+|||
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc
Confidence              568999999999999999998865  9999999999999999999999999999999999999988888999999999


Q ss_pred             CcccccccCCCCC-------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          176 SALLFEEEGGEAS-------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       176 ~a~~~~~~~~~~~-------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      +|+....+....+       .|||++- ...|...+|+||+|+.+..-..+...          |=.+.--.|+.. ++.
T Consensus       210 FAK~t~~~~~L~TPc~TPyYvaPevlg-~eKydkscdmwSlgVimYIlLCGyPP----------FYS~hg~aispg-Mk~  277 (400)
T KOG0604|consen  210 FAKETQEPGDLMTPCFTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPP----------FYSNHGLAISPG-MKR  277 (400)
T ss_pred             cccccCCCccccCCcccccccCHHHhC-chhcCCCCCccchhHHHHHhhcCCCc----------ccccCCccCChh-HHh
Confidence            9998764332211       1676654 46799999999997655433332110          001111122222 333


Q ss_pred             HHHhcCCCCCHHHHHH-------HHHH-HcCCCCCcccHHHHHHH
Q 042392          249 GLTKVGSMLTEFDVKQ-------LMEA-ADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       249 ~l~~~~~~~s~~~i~~-------l~~~-~d~d~~g~i~~~EF~~~  285 (436)
                      -++.=...++++|+.+       +++. +-.++..+++.+||+..
T Consensus       278 rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  278 RIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             HhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            3343223344444333       3332 45678889999999865

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-33  Score=263.07  Aligned_cols=184  Identities=28%  Similarity=0.401  Sum_probs=162.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ......|.....||+|+.|.||.|+...+++.||||.+......    ..+.+.+|+.+|+.+ +|||||.+++.|.-.+
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~----~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~d  343 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP----KKELLLNEILVMRDL-HHPNIVNFLDSYLVGD  343 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC----chhhhHHHHHHHHhc-cchHHHHHHHHhcccc
Confidence            45667899999999999999999999999999999999876533    356789999999999 6999999999999889


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||++||+|.+.+... .++|.++..++++++.||.|||.+||+|||||..|||+   +.++.+||+|||+|..+
T Consensus       344 eLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  344 ELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQI  419 (550)
T ss_pred             eeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeecc
Confidence            999999999999998887654 49999999999999999999999999999999999999   78889999999999988


Q ss_pred             cccCCCCCC--------ChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGGEASD--------DTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .........        |||++.+ +.|+.++||||+|+.++
T Consensus       420 ~~~~~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaI  460 (550)
T KOG0578|consen  420 SEEQSKRSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAI  460 (550)
T ss_pred             ccccCccccccCCCCccchhhhhh-cccCccccchhhhhHHH
Confidence            765433222        8999987 68999999999966654

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.6e-33  Score=270.83  Aligned_cols=149  Identities=29%  Similarity=0.432  Sum_probs=135.7

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++++.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLL-RNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhh-HHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEE
Confidence            6899999999999999999999999999999987543221 23455688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ||||++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|..
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~  150 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTG  150 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCcc
Confidence            9999999999999888889999999999999999999999999999999999999   7788999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.4e-33  Score=265.94  Aligned_cols=189  Identities=30%  Similarity=0.426  Sum_probs=167.8

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-...|.+.+.||+|.|+.|.+|++..|+..||||.+.+.....  .....+.+|+++|+.| +|||||+++++...+.
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~--~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP--SKRQKLGREVDIMKSL-NHPNIVKLFSVIETEA  128 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh--HHHHHHHHHHHHHHhc-CCcceeeeeeeeeecc
Confidence            344567999999999999999999999999999999998887654  3344589999999999 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+.+|.+++++.+.++..+..++.++.|+++|++|||+++|+|||||++|||+   +.+..+||+|||++..+
T Consensus       129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFF  205 (596)
T ss_pred             eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceee
Confidence            999999999999999999999999999999999999999999999999999999999999   77788999999999988


Q ss_pred             cccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHH
Q 042392          181 EEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIV  215 (436)
Q Consensus       181 ~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~  215 (436)
                      ......       ..-+||++.+.++-.+.+|+|++|+.+++
T Consensus       206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~  247 (596)
T KOG0586|consen  206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA  247 (596)
T ss_pred             cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence            753322       22289999998877799999999766543

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.4e-32  Score=264.16  Aligned_cols=187  Identities=25%  Similarity=0.414  Sum_probs=158.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....... ......+.+|+.++..+ +||||+++++++...+.+|+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~l   78 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE-KEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYL   78 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh-hhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEE
Confidence            36899999999999999999999999999999997543221 23455678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc-
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE-  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-  183 (436)
                      |||||+||+|.+++.+.+.+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.++|+|||+|..+... 
T Consensus        79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccc
Confidence            99999999999999988889999999999999999999999999999999999999   77889999999998754321 


Q ss_pred             ------------------------------------------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          184 ------------------------------------------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       184 ------------------------------------------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                                                                +.....|||++.+ ..|+.++|+||+|+ ++.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGv-ilyel~  230 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGV-IMYEML  230 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccc-eeeecc
Confidence                                                      0111228998876 46889999999954 444443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-33  Score=270.59  Aligned_cols=185  Identities=28%  Similarity=0.391  Sum_probs=157.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC----
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET----  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~----  100 (436)
                      ..|...+.||+|+||.||+++++.||+.||||.++....   ....+...+|+++|++| +|||||+++++-++..    
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~---~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~   88 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS---LRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLV   88 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcc---cchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcc
Confidence            456678899999999999999999999999999977552   23456788999999999 6999999999876554    


Q ss_pred             --eEEEEEeccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-CCCcEEEEec
Q 042392          101 --AVHVVMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDF  174 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-~~~~~kl~DF  174 (436)
                        ...+|||||+||||...+.+.   ..+++.+++.++..++.|+.|||++||+||||||.||++-... .....||+||
T Consensus        89 ~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDf  168 (732)
T KOG4250|consen   89 TRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF  168 (732)
T ss_pred             cccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence              467999999999999999874   2499999999999999999999999999999999999885422 3345799999


Q ss_pred             CCcccccccCCCCCC-------ChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGGEASD-------DTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~~~~~-------~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |.|+.+.++..-.+.       +|+++.+.+.|+..+|+||+|+++
T Consensus       169 G~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl  214 (732)
T KOG4250|consen  169 GAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL  214 (732)
T ss_pred             cccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHH
Confidence            999998776533322       899998878999999999997765

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=6.3e-32  Score=257.41  Aligned_cols=184  Identities=24%  Similarity=0.340  Sum_probs=155.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|++..+++.||||++.+..... .........|..++..+.+||+|+++++++...+.+|+|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV   79 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence            5889999999999999999999999999999987643222 223345677888888876789999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-  184 (436)
                      |||+++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++...... 
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~  156 (323)
T cd05616          80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGV  156 (323)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCC
Confidence            9999999999999888889999999999999999999999999999999999999   778899999999997643211 


Q ss_pred             -------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 -------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 -------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                             .....+||.+.+ ..|+.++|+||+|++++
T Consensus       157 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~  192 (323)
T cd05616         157 TTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLY  192 (323)
T ss_pred             ccccCCCChhhcCHHHhcC-CCCCCccchhchhHHHH
Confidence                   112238888875 56889999999955543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=9.7e-32  Score=261.15  Aligned_cols=247  Identities=22%  Similarity=0.286  Sum_probs=184.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-----
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-----  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----  100 (436)
                      +|++++.||+|+||.||+|.+..+++.||||.+......  ......+.+|+.+++.+ +||||+++++++....     
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN--LVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccc--hHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccc
Confidence            478899999999999999999999999999998654222  23345688999999999 6999999999998776     


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+.+ +|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          78 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVE  153 (372)
T ss_pred             eEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeec
Confidence            79999999974 899988887889999999999999999999999999999999999999   77889999999999865


Q ss_pred             cccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-------hhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          181 EEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-------GEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       181 ~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-------~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      .....         ....+||.+.+...|+.++|+||+| +++.+.+.       ......+..+...+..+.     .+
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG-~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~-----~~  227 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVG-CIFAELLGRRILFQAQSPIQQLDLITDLLGTPS-----LE  227 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHH-HHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC-----HH
Confidence            43211         1123899998877788999999995 44444431       222333444443333221     22


Q ss_pred             HHHH-------HHHh-------------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          245 ELRA-------GLTK-------------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       245 eL~~-------~l~~-------------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ++..       .+..             +....+.+-.+.+.+++..|+..|++..|.+.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         228 AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            2211       1111             112234444566666777788888888887654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.6e-31  Score=256.42  Aligned_cols=181  Identities=25%  Similarity=0.359  Sum_probs=151.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC-----C
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE-----T  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-----~  100 (436)
                      +|++.+.||+|+||.||+|++..++..||||.+......  ......+.+|+.+++.+ +||||+++++++...     .
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~   77 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH--VSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFK   77 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc--chhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCc
Confidence            599999999999999999999999999999998643221  22334678999999999 699999999987543     3


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++..
T Consensus        78 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          78 DIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVA  153 (338)
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCcccccc
Confidence            5899999996 5999999888889999999999999999999999999999999999999   77889999999999865


Q ss_pred             cccCC-----------CCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          181 EEEGG-----------EASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~-----------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                      .....           ....+||++.+. ..|+.++|+||+|+++
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl  198 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF  198 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence            32211           112389987653 5688899999995554

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-32  Score=261.13  Aligned_cols=187  Identities=28%  Similarity=0.424  Sum_probs=160.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYL   78 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEE
Confidence            47999999999999999999999999999999987543222 23445688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|.+++.+.+.+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++.......
T Consensus        79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~  155 (350)
T cd05573          79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAK  155 (350)
T ss_pred             EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccC
Confidence            99999999999999988889999999999999999999999999999999999999   778899999999998765433


Q ss_pred             -------------------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          185 -------------------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       185 -------------------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                                                           .....+||.+.+. .++.++|+||+|++ +.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~i-l~ell  224 (350)
T cd05573         156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVI-LYEML  224 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchh-hhhhc
Confidence                                                 1112288888764 78899999999544 44443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.4e-32  Score=254.67  Aligned_cols=183  Identities=26%  Similarity=0.356  Sum_probs=154.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-hhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEE
Confidence            3788999999999999999999999999999987553322 22344678999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++|+|..++...  ..+++..+..++.|++.||.|||+.+|+||||||+|||+   +.++.++|+|||++......
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCC
Confidence            9999999998888653  358999999999999999999999999999999999999   67889999999999875432


Q ss_pred             CC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG-------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..       ....+||.+.+ ..|+.++|+||+|++++
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~  192 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIY  192 (285)
T ss_pred             CeecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHH
Confidence            11       12238888875 46889999999965553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.7e-32  Score=265.56  Aligned_cols=187  Identities=28%  Similarity=0.411  Sum_probs=157.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++..+..
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCE
Confidence            34578999999999999999999999999999999986532222 22345678899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+|||||++|+|.+++... .+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|....
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecc
Confidence            99999999999999998654 58999999999999999999999999999999999999   778899999999998764


Q ss_pred             ccC---------CCCCCChHHHHHHH---HHHHhhhhhhHHHHHH
Q 042392          182 EEG---------GEASDDTSVILRMK---QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~---------~~~~~~pe~~~~~~---~~~~~~d~~s~~~~~~  214 (436)
                      ...         .....|||++.+..   .|+.++|+||+|++++
T Consensus       194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ily  238 (370)
T cd05621         194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF  238 (370)
T ss_pred             cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHH
Confidence            322         11223899987542   3778999999955543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-33  Score=245.10  Aligned_cols=190  Identities=27%  Similarity=0.409  Sum_probs=162.4

Q ss_pred             cccccceee-eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSF-GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+.+-|++ .+.||+|+|+.|--|....||.+||||++.+...    .....+.||++++..+.+|+||++++++|++.
T Consensus        73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g----HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG----HSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc----hHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            335556777 6789999999999999999999999999988753    45678999999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+|+|||-+.||+|.+.|.++..+++.++.++.+.|+.||.|||.+||.||||||+|||....+.-.-||||||.++.-
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999997666666799999988765


Q ss_pred             ccccCC--CCC-------------CChHHHHHH----HHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG--EAS-------------DDTSVILRM----KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~--~~~-------------~~pe~~~~~----~~~~~~~d~~s~~~~~~  214 (436)
                      +.....  .++             .|||++.-.    ..|...+|+||+|+.+.
T Consensus       229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlY  282 (463)
T KOG0607|consen  229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILY  282 (463)
T ss_pred             cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHH
Confidence            432211  111             188876532    36889999999977653

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=7.7e-32  Score=256.90  Aligned_cols=183  Identities=25%  Similarity=0.332  Sum_probs=154.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|++..+++.||||++.+..... ......+..|+.+++.+.+|++|+++++++...+.+|+|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   79 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence            5899999999999999999999999999999987643222 233456778999999985456788999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc--
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE--  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--  183 (436)
                      |||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......  
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05587          80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGK  156 (324)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCC
Confidence            9999999999999888889999999999999999999999999999999999999   77889999999998753221  


Q ss_pred             ------CCCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 ------GGEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                            +.....+||++.+ ..|+.++|+||+|+.+
T Consensus       157 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (324)
T cd05587         157 TTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL  191 (324)
T ss_pred             ceeeecCCccccChhhhcC-CCCCcccchhhhHHHH
Confidence                  1122338888876 4678899999995544

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.2e-32  Score=259.94  Aligned_cols=178  Identities=25%  Similarity=0.316  Sum_probs=151.6

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      ++||+|+||.||+|++..+++.||+|++.+..... ......+.+|..+++.+.+||||+++++++.....+|+|||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            46999999999999999999999999997653322 23345678899999998779999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++...+++++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++.......     
T Consensus        80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (329)
T cd05588          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTF  156 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999875322111     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                         ....+||++.+ ..|+.++|+||+|+++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l  186 (329)
T cd05588         157 CGTPNYIAPEILRG-EDYGFSVDWWALGVLM  186 (329)
T ss_pred             cCCccccCHHHHcC-CCCCCccceechHHHH
Confidence               12238998876 4678899999995554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-32  Score=267.57  Aligned_cols=199  Identities=26%  Similarity=0.347  Sum_probs=160.0

Q ss_pred             CCCcccccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC
Q 042392            6 SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG   85 (436)
Q Consensus         6 ~~~~~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   85 (436)
                      ..++....-..+...+.-.-++++.++|.+|+|+.||+|.+...|..||+|.+-...    ......+.+||.+|+.|++
T Consensus        18 ~~~~~~~~~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d----e~~L~~v~~EI~~MK~L~g   93 (738)
T KOG1989|consen   18 GSSPQSENYFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND----EEALNAVKREIDIMKLLSG   93 (738)
T ss_pred             CCCcccccCCCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC----HHHHHHHHHHHHHHHHhcC
Confidence            334444333445666666678999999999999999999998888999999876552    4566789999999999999


Q ss_pred             CCCeeeceee-eec------CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCC
Q 042392           86 QPNIVELKSA-HED------ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLK  154 (436)
Q Consensus        86 h~niv~~~~~-~~~------~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlk  154 (436)
                      |||||.+++. ...      .-.++|.||||.||.|.+++..+  .+|++.+++.|+.++|+||.+||...  |||||||
T Consensus        94 h~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLK  173 (738)
T KOG1989|consen   94 HKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLK  173 (738)
T ss_pred             CCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhh
Confidence            9999999993 221      12478999999999999999864  45999999999999999999999988  9999999


Q ss_pred             CCcceeeccCCCCcEEEEecCCcccccccCC-----------------CCCCChHHHHHH--HHHHHhhhhhhHHH
Q 042392          155 PENFCFISRDDNALLKVTDFGSALLFEEEGG-----------------EASDDTSVILRM--KQFRRMSKLKKLTV  211 (436)
Q Consensus       155 p~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----------------~~~~~pe~~~~~--~~~~~~~d~~s~~~  211 (436)
                      -||||+   ..++..||||||.|.-......                 ....+||++.-.  ...+.++|||++|+
T Consensus       174 iENvLl---s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGc  246 (738)
T KOG1989|consen  174 IENVLL---SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGC  246 (738)
T ss_pred             hhheEE---cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHH
Confidence            999999   7888999999999875432211                 112299988743  34568999999944

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1e-31  Score=255.85  Aligned_cols=183  Identities=24%  Similarity=0.344  Sum_probs=154.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|+++.+++.||+|++.+..... ......+..|..+++.+.+||+|+++++++...+.+|+|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            4788999999999999999999999999999987643221 223455778888998886678899999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-  184 (436)
                      |||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++...... 
T Consensus        80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~  156 (323)
T cd05615          80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGV  156 (323)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCc
Confidence            9999999999999888889999999999999999999999999999999999999   778899999999987643221 


Q ss_pred             -------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 -------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 -------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                             .....+||.+.+ ..++.++|+||+|+.+
T Consensus       157 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (323)
T cd05615         157 TTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLL  191 (323)
T ss_pred             cccCccCCccccCHHHHcC-CCCCCccchhhhHHHH
Confidence                   112238998765 4688899999995544

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=9.2e-32  Score=256.63  Aligned_cols=178  Identities=25%  Similarity=0.341  Sum_probs=151.4

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~   78 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVN   78 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCC
Confidence            46999999999999999999999999997643222 23445678899999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC------
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++......      
T Consensus        79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~  155 (328)
T cd05593          79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTF  155 (328)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCcccccccc
Confidence            99999999888889999999999999999999999999999999999999   778899999999987643211      


Q ss_pred             --CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 --GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 --~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        .....+||.+.+ ..++.++|+||+|++++
T Consensus       156 ~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~  186 (328)
T cd05593         156 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMY  186 (328)
T ss_pred             cCCcCccChhhhcC-CCCCccCCccccchHHH
Confidence              112238888865 46788999999955543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-32  Score=255.36  Aligned_cols=176  Identities=23%  Similarity=0.334  Sum_probs=150.2

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            799999999999999999999999987543222 23345678899999999 6999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC--------
Q 042392          113 DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG--------  184 (436)
Q Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--------  184 (436)
                      +|.+++...+++++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++......        
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  155 (312)
T cd05585          79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCG  155 (312)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccC
Confidence            999999988889999999999999999999999999999999999999   778899999999998643211        


Q ss_pred             CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....+||.+.+ ..|+.++|+||+|++++
T Consensus       156 t~~y~aPE~~~~-~~~~~~~DvwslGvil~  184 (312)
T cd05585         156 TPEYLAPELLLG-HGYTKAVDWWTLGVLLY  184 (312)
T ss_pred             CcccCCHHHHcC-CCCCCccceechhHHHH
Confidence            112238888876 46888999999965543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=8.8e-32  Score=256.16  Aligned_cols=178  Identities=24%  Similarity=0.305  Sum_probs=149.9

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||||++.+..... ......+..|..+++.+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence            46999999999999999999999999987643221 23344567888888877679999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+|........     
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (321)
T cd05591          80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTF  156 (321)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCcccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999876432211     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                         ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (321)
T cd05591         157 CGTPDYIAPEILQE-LEYGPSVDWWALGVLM  186 (321)
T ss_pred             ccCccccCHHHHcC-CCCCCccceechhHHH
Confidence               12238888765 4678899999995544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=6.9e-32  Score=257.99  Aligned_cols=188  Identities=28%  Similarity=0.390  Sum_probs=158.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~l   78 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYL   78 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEE
Confidence            36999999999999999999999999999999997643222 23456688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++|+|.+++.+. ..+++..++.++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||+|..+...
T Consensus        79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCC
Confidence            99999999999999876 679999999999999999999999999999999999999   77889999999999876432


Q ss_pred             CC---------CCCCChHHHHH-----HHHHHHhhhhhhHHHHHHHhcC
Q 042392          184 GG---------EASDDTSVILR-----MKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~-----~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ..         ....+||.+..     ...|+.++|+||+|+ ++.+.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~-il~el~  203 (330)
T cd05601         156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGV-IAYEMI  203 (330)
T ss_pred             CceeeecccCCccccCHHHhccccccccCCCCCcceeecccc-eeeeec
Confidence            21         12238998864     345678899999954 444433

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=8.4e-32  Score=256.87  Aligned_cols=178  Identities=24%  Similarity=0.313  Sum_probs=151.5

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.++..+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            46999999999999999999999999997653322 23445678899999888779999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC------
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++......      
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (327)
T cd05617          80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTF  156 (327)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceecc
Confidence            99999999888889999999999999999999999999999999999999   678899999999987532211      


Q ss_pred             --CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 --GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 --~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                        .....+||.+.+ ..|+.++|+||+|+++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DiwslGvil  186 (327)
T cd05617         157 CGTPNYIAPEILRG-EEYGFSVDWWALGVLM  186 (327)
T ss_pred             cCCcccCCHHHHCC-CCCCchheeehhHHHH
Confidence              112238888865 4678899999995544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=8.1e-33  Score=239.08  Aligned_cols=192  Identities=28%  Similarity=0.409  Sum_probs=165.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----hhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----AENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ..+-.+|.-.+.||+|..+.|-+|.++.||..+|+|++........    ....+.-.+|+.||+++++||+|+++.++|
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            4455678888999999999999999999999999999876543322    234556678999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      +++..+++|+|.|+.|.|++++.+.-.+++..++.+++|++.|+.|||..+||||||||+|||+   +++.++||+|||+
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGF  169 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGF  169 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccce
Confidence            9999999999999999999999998889999999999999999999999999999999999999   7889999999999


Q ss_pred             cccccccC-------CCCCCChHHHHH-----HHHHHHhhhhhhHHHHHHH
Q 042392          177 ALLFEEEG-------GEASDDTSVILR-----MKQFRRMSKLKKLTVKVIV  215 (436)
Q Consensus       177 a~~~~~~~-------~~~~~~pe~~~~-----~~~~~~~~d~~s~~~~~~~  215 (436)
                      |+.+.+..       .....|||.+..     ...|+..+|+|+.|+.++.
T Consensus       170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyT  220 (411)
T KOG0599|consen  170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYT  220 (411)
T ss_pred             eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHH
Confidence            99987643       233348887653     3468999999998665543

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.3e-31  Score=254.24  Aligned_cols=179  Identities=23%  Similarity=0.341  Sum_probs=148.7

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||||++....... .........|..++..+.+||||+++++++.....+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            46999999999999999999999999997643221 22334456677777665579999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      ||+|..++...+.+++..+..++.||+.||.|||+.+|+||||||+||++   +.++.+||+|||+|........     
T Consensus        80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~  156 (316)
T cd05592          80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTF  156 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999976432211     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         ....+||.+.+ ..|+.++|+||+|+.++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~  187 (316)
T cd05592         157 CGTPDYIAPEILKG-QKYNESVDWWSFGVLLY  187 (316)
T ss_pred             cCCccccCHHHHcC-CCCCCcccchhHHHHHH
Confidence               12238998876 45788999999955543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.5e-32  Score=259.19  Aligned_cols=185  Identities=25%  Similarity=0.372  Sum_probs=156.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK-RAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYL   78 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEE
Confidence            47999999999999999999999999999999987532222 23345678899999999 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||++||+|.+++.+ ...+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++..+...
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCC
Confidence            9999999999999976 4569999999999999999999999999999999999999   77889999999998765432


Q ss_pred             CC---------CCCCChHHHHH----HHHHHHhhhhhhHHHHHH
Q 042392          184 GG---------EASDDTSVILR----MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~  214 (436)
                      ..         ....+||++.+    ...++.++|+||+|++++
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~  199 (331)
T cd05597         156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMY  199 (331)
T ss_pred             CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHH
Confidence            21         12238998874    245778899999955543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.8e-33  Score=282.13  Aligned_cols=203  Identities=29%  Similarity=0.366  Sum_probs=171.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.++|.++++||+|+||.|..++++.|++.||+|++.+-...+ ....+.++.|-.+|... +.+.|++++-.|++..++
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlK-r~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLK-RAETACFREERDIMVFG-NSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhh-chhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccce
Confidence            4568999999999999999999999999999999997743333 34456788899999888 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||++||+|..++.+..++|+..++.|+..|+.||.-||+.|+|||||||.|||+   +..|++||+|||.|..+..
T Consensus       151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~  227 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDA  227 (1317)
T ss_pred             EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCC
Confidence            9999999999999999998899999999999999999999999999999999999999   8999999999999988876


Q ss_pred             cCCCCC---------CChHHHHHH----HHHHHhhhhhhHHHHHHHhcC--ChhhHHHHHHHh
Q 042392          183 EGGEAS---------DDTSVILRM----KQFRRMSKLKKLTVKVIVEYL--PGEETQALKEKF  230 (436)
Q Consensus       183 ~~~~~~---------~~pe~~~~~----~~~~~~~d~~s~~~~~~~~~l--~~e~~~~l~~~F  230 (436)
                      ++...+         .+||++...    ..|++.+|.||+|+++.-..+  +|-.-+.+...|
T Consensus       228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY  290 (1317)
T KOG0612|consen  228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY  290 (1317)
T ss_pred             CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH
Confidence            544322         299999855    467899999999666543333  333333444433

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.98  E-value=9.9e-31  Score=247.09  Aligned_cols=184  Identities=23%  Similarity=0.285  Sum_probs=151.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECC----------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENS----------------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ   86 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h   86 (436)
                      ...+|++.+.||+|+||.||+|.+..                ++..||+|++.....   ......+.+|+.+++.+ +|
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h   78 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---KNARNDFLKEVKILSRL-KD   78 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---HHHHHHHHHHHHHHhhc-CC
Confidence            34689999999999999999998632                345799999865432   23456788999999999 69


Q ss_pred             CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcC
Q 042392           87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-------------------YYSERDAAPVLRAIVNAVNVCHSMG  147 (436)
Q Consensus        87 ~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~qi~~~l~~lH~~~  147 (436)
                      |||+++++++...+..|+||||+++|+|.+++....                   .++...+..++.||+.||.|||+.|
T Consensus        79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999999999999999999986532                   2567788999999999999999999


Q ss_pred             cccccCCCCcceeeccCCCCcEEEEecCCcccccccC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG----------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       148 i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+||||||+|||+   +.++.+||+|||+++......          .....+||.+.+ ..++.++|+||+|+++.
T Consensus       159 ivH~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~  231 (304)
T cd05096         159 FVHRDLATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLW  231 (304)
T ss_pred             ccccCcchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHH
Confidence            9999999999999   678899999999998653321          112238888765 46889999999965543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.98  E-value=1.2e-31  Score=259.88  Aligned_cols=185  Identities=27%  Similarity=0.384  Sum_probs=155.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.++|++.+.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++.....+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEE
Confidence            3468999999999999999999999999999999987533222 22344577899999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||+||+|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||++.....
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccC
Confidence            9999999999999988654 58999999999999999999999999999999999999   7789999999999987643


Q ss_pred             cCC---------CCCCChHHHHHH---HHHHHhhhhhhHHHHH
Q 042392          183 EGG---------EASDDTSVILRM---KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~---------~~~~~pe~~~~~---~~~~~~~d~~s~~~~~  213 (436)
                      ...         ....|||.+.+.   ..++.++|+||+|+++
T Consensus       195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvil  237 (370)
T cd05596         195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  237 (370)
T ss_pred             CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHH
Confidence            221         112289988753   2478899999995544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.98  E-value=1.8e-31  Score=250.01  Aligned_cols=182  Identities=24%  Similarity=0.339  Sum_probs=152.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++......  ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   77 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN--EEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYL   77 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEE
Confidence            3799999999999999999999999999999998765332  23345678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||++++.+..+......+++..++.++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||+|.......
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          78 VFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCcccccccc
Confidence            99999986665554444569999999999999999999999999999999999999   778899999999998764321


Q ss_pred             C---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 G---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .         ....+||.+.+ ..++.++|+||+|+++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil  191 (287)
T cd07848         155 NANYTEYVATRWYRSPELLLG-APYGKAVDMWSVGCIL  191 (287)
T ss_pred             cccccccccccccCCcHHHcC-CCCCCchhHHhHHHHH
Confidence            1         11238998876 4578899999995544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.98  E-value=2e-31  Score=263.58  Aligned_cols=178  Identities=26%  Similarity=0.303  Sum_probs=146.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      ...+|++.+.||+|+||.||+|.+..+++.||||.+....        ....+|+.+++.+ +||||++++++|...   
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~  134 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNL-NHINIIFLKDYYYTECFK  134 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhc-CCCCCcceeeeEeecccc
Confidence            4567999999999999999999999999999999885432        1245799999999 699999999887432   


Q ss_pred             -----CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC-CcE
Q 042392          100 -----TAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN-ALL  169 (436)
Q Consensus       100 -----~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~  169 (436)
                           ..+++||||+++ +|.+++..    ...+++..++.++.||+.||.|||+.+|+||||||+|||+   +.+ +.+
T Consensus       135 ~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl---~~~~~~v  210 (440)
T PTZ00036        135 KNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI---DPNTHTL  210 (440)
T ss_pred             cCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE---cCCCCce
Confidence                 247899999986 78777653    3568999999999999999999999999999999999999   433 479


Q ss_pred             EEEecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          170 KVTDFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       170 kl~DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|||+|+.+......       ...|||++.+...|+.++|+||+|+++
T Consensus       211 kL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil  261 (440)
T PTZ00036        211 KLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCII  261 (440)
T ss_pred             eeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999999876432221       123899988767789999999995544

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.98  E-value=2.5e-31  Score=258.17  Aligned_cols=247  Identities=18%  Similarity=0.217  Sum_probs=178.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEE-----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTE-----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      +.....+|++.+.||+|+||.||+|++     ..++..||||++.....   ......+.+|+.+++.+.+||||+++++
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~  106 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLG  106 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeee
Confidence            445566899999999999999999974     34577899999864432   2334568899999999966999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC----------------------------------------------------
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG----------------------------------------------------  122 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------------------------------------------  122 (436)
                      ++......|+|||||++|+|.+++....                                                    
T Consensus       107 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  186 (375)
T cd05104         107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR  186 (375)
T ss_pred             eeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence            9999999999999999999999986532                                                    


Q ss_pred             -----------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          123 -----------------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       123 -----------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                                             .+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~  263 (375)
T cd05104         187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARD  263 (375)
T ss_pred             cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCcccee
Confidence                                   35677889999999999999999999999999999999   6678899999999986


Q ss_pred             ccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          180 FEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       180 ~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......          ....+||.+.+ ..++.++|+||+|+.++ +.++..            ..+-.+......+...
T Consensus       264 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~-ellt~g------------~~p~~~~~~~~~~~~~  329 (375)
T cd05104         264 IRNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLW-EIFSLG------------SSPYPGMPVDSKFYKM  329 (375)
T ss_pred             ccCcccccccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHH-HHHhcC------------CCCCCCCCchHHHHHH
Confidence            543221          11238888865 46889999999965543 322100            0000111111222222


Q ss_pred             HHh----cCCCCCHHHHHH-HHHHHcCCCCCcccHHHHHHHH
Q 042392          250 LTK----VGSMLTEFDVKQ-LMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       250 l~~----~~~~~s~~~i~~-l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +..    ........++.. +..++..|++.|+++.|.+..+
T Consensus       330 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l  371 (375)
T cd05104         330 IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLI  371 (375)
T ss_pred             HHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            221    111122234434 4445677888899999888665

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.98  E-value=1.4e-31  Score=254.54  Aligned_cols=179  Identities=23%  Similarity=0.310  Sum_probs=150.1

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|+++.+++.||||++.+..... ......+.+|..++..+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-DDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence            46999999999999999999999999987543221 22345567888888877579999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++.....+++..+..++.|++.||.|||+++|+||||||+|||+   +.++.+||+|||++........     
T Consensus        80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (320)
T cd05590          80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTF  156 (320)
T ss_pred             CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999876432111     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         ....+||.+.+ ..|+.++|+||+|++++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  187 (320)
T cd05590         157 CGTPDYIAPEILQE-MLYGPSVDWWAMGVLLY  187 (320)
T ss_pred             ccCccccCHHHHcC-CCCCCccchhhhHHHHH
Confidence               12238888865 46788999999955543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.98  E-value=9.8e-32  Score=255.98  Aligned_cols=178  Identities=27%  Similarity=0.361  Sum_probs=151.0

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+|..||+|++....... ......+.+|+.+++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCC
Confidence            46999999999999999999999999987643222 23345677899999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++........     
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~  155 (323)
T cd05595          79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999875422211     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         ....+||.+.+ ..|+.++|+||+|++++
T Consensus       156 ~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~  186 (323)
T cd05595         156 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMY  186 (323)
T ss_pred             cCCcCcCCcccccC-CCCCchhchhhhHHHHH
Confidence               12238998865 46789999999955543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=2.7e-31  Score=258.63  Aligned_cols=177  Identities=20%  Similarity=0.309  Sum_probs=151.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|....          ..+.+|+++++.+ +||||++++++|......+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~----------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR----------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh----------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeE
Confidence            4579999999999999999999999999999996432          2467899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|+|++. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|+.....
T Consensus       160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~  235 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDI  235 (391)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCcccccccc
Confidence            9999996 5999999888889999999999999999999999999999999999999   67789999999999753221


Q ss_pred             C---------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhc
Q 042392          184 G---------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEY  217 (436)
Q Consensus       184 ~---------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~  217 (436)
                      .         .....+||++.+ ..|+.++|+||+|+ ++.+.
T Consensus       236 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGv-il~el  276 (391)
T PHA03212        236 NANKYYGWAGTIATNAPELLAR-DPYGPAVDIWSAGI-VLFEM  276 (391)
T ss_pred             cccccccccCccCCCChhhhcC-CCCCcHHHHHHHHH-HHHHH
Confidence            1         112238998876 46889999999955 44443

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.98  E-value=7.4e-31  Score=250.84  Aligned_cols=184  Identities=20%  Similarity=0.229  Sum_probs=158.7

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..++|++.+.||+|+||.||+|++..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   78 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEI   78 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            35789999999999999999999999999999999875432   23456789999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++   +.++.+||+|||++....
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCccccccc
Confidence            99999999999999998888899999999999999999999985 69999999999999   678899999999997664


Q ss_pred             ccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....      ....+||.+.+ ..++.++|+||+|++++
T Consensus       156 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~  193 (331)
T cd06649         156 DSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLV  193 (331)
T ss_pred             ccccccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHH
Confidence            3221      12238888876 46888999999966543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.98  E-value=5.1e-32  Score=262.44  Aligned_cols=187  Identities=28%  Similarity=0.397  Sum_probs=157.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|++.+.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++....
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~  116 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDR  116 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence            344578999999999999999999999999999999986533221 22345577899999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~  192 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKM  192 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEc
Confidence            999999999999999988654 58999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCC---------CCCCChHHHHHHH---HHHHhhhhhhHHHHH
Q 042392          181 EEEGG---------EASDDTSVILRMK---QFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~---------~~~~~pe~~~~~~---~~~~~~d~~s~~~~~  213 (436)
                      .....         ....|||++.+..   .|+.++|+||+|+++
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil  237 (371)
T cd05622         193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  237 (371)
T ss_pred             CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHH
Confidence            43221         1123899887532   377899999995544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.98  E-value=1.2e-31  Score=255.86  Aligned_cols=179  Identities=25%  Similarity=0.312  Sum_probs=151.8

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.++..+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            46999999999999999999999999997654322 23445678899988877679999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++.......     
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (329)
T cd05618          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTF  156 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999975422111     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         ....+||.+.+ ..|+.++|+||+|++++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  187 (329)
T cd05618         157 CGTPNYIAPEILRG-EDYGFSVDWWALGVLMF  187 (329)
T ss_pred             cCCccccCHHHHcC-CCCCCccceecccHHHH
Confidence               12238998876 46788999999955543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.98  E-value=3.3e-31  Score=250.90  Aligned_cols=182  Identities=23%  Similarity=0.280  Sum_probs=154.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++.+.||+|+||.||+|++..+++.||+|.+......   .....+.+|+.+++.+ +||||+++++++...+..|
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEE
Confidence            47899999999999999999999999999999998754322   2234567899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~  156 (309)
T cd07872          81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSV  156 (309)
T ss_pred             EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCC
Confidence            99999976 8988887654 48899999999999999999999999999999999999   6788999999999976433


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ....+||.+.+...++.++|+||+|+++
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  195 (309)
T cd07872         157 PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIF  195 (309)
T ss_pred             CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHH
Confidence            211        1123899887766788999999995554

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.98  E-value=1.2e-32  Score=257.25  Aligned_cols=184  Identities=29%  Similarity=0.405  Sum_probs=160.1

Q ss_pred             cceee--eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           25 LHYSF--GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        25 ~~y~~--~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .-|++  .++||+|.||+||-|+++.+|+.||||++.+.....  ..+..+++|++||+++ .||.||.+...|++++.+
T Consensus       562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~--kqesqlR~EVaILq~l-~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT--KQESQLRNEVAILQNL-HHPGIVNLECMFETPERV  638 (888)
T ss_pred             HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC--chHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceE
Confidence            34666  689999999999999999999999999998765443  3347899999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 HVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ++|||-+.| +..+.|.+  .+++++.....++.||+.||.|||-++|+|+||||+|+|+.+.+....+||||||+|+.+
T Consensus       639 FVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  639 FVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             EEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            999999965 77777654  477999999999999999999999999999999999999988777889999999999998


Q ss_pred             cccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .+..       ..+..|||++.+ +.|.+.-|+||.|+.+
T Consensus       718 gEksFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIi  756 (888)
T KOG4236|consen  718 GEKSFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVII  756 (888)
T ss_pred             chhhhhhhhcCCccccCHHHHhh-ccccccccceeeeEEE
Confidence            7642       233448998877 7899999999986654

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.98  E-value=6.7e-32  Score=258.02  Aligned_cols=184  Identities=25%  Similarity=0.353  Sum_probs=155.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.++..+ +||||+++++++...+.+|+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~l   78 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-RAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYL   78 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEE
Confidence            47999999999999999999999999999999986532221 23344577899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|......
T Consensus        79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCC
Confidence            9999999999999987 4578999999999999999999999999999999999999   77889999999999766432


Q ss_pred             CC---------CCCCChHHHHHH----HHHHHhhhhhhHHHHH
Q 042392          184 GG---------EASDDTSVILRM----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~~----~~~~~~~d~~s~~~~~  213 (436)
                      ..         ....+||.+.+.    ..++.++|+||+|+.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil  198 (331)
T cd05624         156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM  198 (331)
T ss_pred             CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh
Confidence            21         122389988753    3577899999995544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=3.2e-33  Score=239.02  Aligned_cols=260  Identities=19%  Similarity=0.270  Sum_probs=190.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ...+.|.....||+|+||.||+|+.+.+|+.||+|++--....  ........+|+.+|..| +|+|++.+++++..   
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK--eGfpitalreikiL~~l-kHenv~nliEic~tk~T   90 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK--EGFPITALREIKILQLL-KHENVVNLIEICRTKAT   90 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc--cCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccC
Confidence            3456788899999999999999999999999999976442211  23445678999999999 69999999987743   


Q ss_pred             -----CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 -----ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 -----~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                           ...+|+|+.+|+. +|..++... -+++..++..++.+++.||.|+|...|+|||+||+|+|+   +.++.+||+
T Consensus        91 p~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklA  166 (376)
T KOG0669|consen   91 PTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLA  166 (376)
T ss_pred             CcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEee
Confidence                 2358999999988 999999776 469999999999999999999999999999999999999   788999999


Q ss_pred             ecCCcccccccCCCC------------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-------hhhHHHHHHH---h
Q 042392          173 DFGSALLFEEEGGEA------------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-------GEETQALKEK---F  230 (436)
Q Consensus       173 DFG~a~~~~~~~~~~------------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-------~e~~~~l~~~---F  230 (436)
                      |||+|+.+.......            ..+||.++|.+.|+++.|+|.+ +|++++++.       ..+.+++.-+   .
T Consensus       167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgA-gCimaeMwtrspimqgnteqqql~~Is~Lc  245 (376)
T KOG0669|consen  167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGA-GCIMAEMWTRSPIMQGNTEQQQLHLISQLC  245 (376)
T ss_pred             ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhH-HHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence            999998765432221            1289999999999999999998 899999872       3334443333   2


Q ss_pred             hhh--CCCCCCccCHHHHHHHHH--------------hcCCCC-CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh
Q 042392          231 IEM--DTDKNGTLSYDELRAGLT--------------KVGSML-TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK  291 (436)
Q Consensus       231 ~~~--D~~~~g~i~~~eL~~~l~--------------~~~~~~-s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~  291 (436)
                      ..+  +.|++  ...-+|...+.              .+.+.. ..+.++.+=+.+-.|++.+|+-.+-+..-.....
T Consensus       246 Gs~tkevWP~--~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  246 GSITKEVWPN--VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             ccCCcccCCC--cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            222  22332  11112222221              111111 2233444555567788888888887776554433

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.98  E-value=3.6e-31  Score=251.29  Aligned_cols=179  Identities=23%  Similarity=0.306  Sum_probs=149.2

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+|+.||+|++....... .........|..++..+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            46999999999999999999999999997643211 12334567788888765579999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc-------
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE-------  183 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-------  183 (436)
                      +|+|..++...+.+++..+..++.|++.||.|||++||+||||||+||++   +.++.++|+|||+++.....       
T Consensus        80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (316)
T cd05620          80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTF  156 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceecc
Confidence            99999999888889999999999999999999999999999999999999   77889999999998753211       


Q ss_pred             -CCCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 -GGEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 -~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                       +.....+||.+.+ ..|+.++|+||+|++++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~  187 (316)
T cd05620         157 CGTPDYIAPEILQG-LKYTFSVDWWSFGVLLY  187 (316)
T ss_pred             CCCcCccCHHHHcC-CCCCcccchhhhHHHHH
Confidence             1112238998876 46888999999965543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.5e-33  Score=243.58  Aligned_cols=247  Identities=20%  Similarity=0.273  Sum_probs=195.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-----
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-----  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----  100 (436)
                      +.+-.+.||.|+||.||.+++..+|+.||+|.+..-...  -..-+.+.+|+.+|+.+ +|.|+...+++.+...     
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~--L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN--LASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHH--HHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHH
Confidence            445568899999999999999999999999987654322  23456788999999999 6999999999887653     


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+++|++.. +|..+|.+...++...++-++.||++||.|||+.+|+||||||.|+|+   +++..+||||||+|+..
T Consensus       131 EiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  131 ELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEeccccccccc
Confidence            47999999976 999999888889999999999999999999999999999999999999   78999999999999987


Q ss_pred             cccCCCC---------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh-------hhHHHHHHHhhhhCCCCCCccCHH
Q 042392          181 EEEGGEA---------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-------EETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       181 ~~~~~~~---------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~-------e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      .......         ..+||++.|.+.|+.++||||. +|++++.++.       ..++++.-+-..+     |+.+.+
T Consensus       207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV-GCIFaELLgRrILFQAq~PiqQL~lItdLL-----GTPs~E  280 (449)
T KOG0664|consen  207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV-GCIFAELLQRKILFQAAGPIEQLQMIIDLL-----GTPSQE  280 (449)
T ss_pred             chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehh-hHHHHHHHhhhhhhhccChHHHHHHHHHHh-----CCCcHH
Confidence            6543322         2299999999999999999999 8898887743       3444555444443     456666


Q ss_pred             HHHHHHHhc--------------------CC--CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          245 ELRAGLTKV--------------------GS--MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       245 eL~~~l~~~--------------------~~--~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .++.+..--                    ..  .-+.+.+..+.+.++.|++.+|+-++-+.+
T Consensus       281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence            666544311                    00  123455777788888888888887776544

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.98  E-value=5.3e-31  Score=250.09  Aligned_cols=179  Identities=23%  Similarity=0.320  Sum_probs=148.7

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||||++....... .........|..+++.+.+||||+++++++.+.+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            46999999999999999999999999997643211 12234566777888765479999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC------
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|+|..++.+...+++..+..++.|++.||.|||+.||+||||||+|||+   +.++.+||+|||++.......      
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (316)
T cd05619          80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTF  156 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeee
Confidence            99999999888889999999999999999999999999999999999999   778899999999987532211      


Q ss_pred             --CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 --GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 --~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        .....+||.+.+ ..|+.++|+||+|++++
T Consensus       157 ~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~  187 (316)
T cd05619         157 CGTPDYIAPEILLG-QKYNTSVDWWSFGVLLY  187 (316)
T ss_pred             cCCccccCHHHHcC-CCCCchhhhhhHHHHHH
Confidence              112338998865 46889999999955543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.98  E-value=3.9e-31  Score=251.31  Aligned_cols=229  Identities=23%  Similarity=0.303  Sum_probs=171.9

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.+++.+.+||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            46999999999999999999999999997643222 23345567888999888679999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++.+.+.+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||+++.......     
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (318)
T cd05570          80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTF  156 (318)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCcccce
Confidence            99999999888889999999999999999999999999999999999999   7788999999999875322111     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh----cCCCCC
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK----VGSMLT  258 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~----~~~~~s  258 (436)
                         ....+||.+.+ ..|+.++|+||+|+.+ .+.+...      ..|   +     ..+..++...+..    +....+
T Consensus       157 ~g~~~y~aPE~~~~-~~~~~~~DiwslGvil-~~l~~G~------~pf---~-----~~~~~~~~~~i~~~~~~~~~~~~  220 (318)
T cd05570         157 CGTPDYIAPEILSY-QPYGPAVDWWALGVLL-YEMLAGQ------SPF---E-----GDDEDELFQSILEDEVRYPRWLS  220 (318)
T ss_pred             ecCccccCHHHhcC-CCCCcchhhhhHHHHH-HHHhhCC------CCC---C-----CCCHHHHHHHHHcCCCCCCCcCC
Confidence               12238888876 4678899999995544 3333111      001   0     1112222222221    112344


Q ss_pred             HHHHHHHHHHHcCCCCCcccH
Q 042392          259 EFDVKQLMEAADMDGNGAIDY  279 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~  279 (436)
                      .+-.+.+-+.+..|++.|++.
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCC
Confidence            444555556677888888887

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.98  E-value=5.1e-31  Score=251.25  Aligned_cols=180  Identities=26%  Similarity=0.323  Sum_probs=149.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHH---hcCCCCCeeeceeeeecCCeEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR---LLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~---~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      |++.+.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.++.   .+ +||||+++++++...+.+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEE
Confidence            788999999999999999999999999999997543221 223445677776654   45 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||+++++|..++.. +.+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++......
T Consensus        79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05589          79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGF  154 (324)
T ss_pred             EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCC
Confidence            99999999999888754 569999999999999999999999999999999999999   77889999999998754322


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..        ....+||.+.+ ..++.++|+||+|+++
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il  191 (324)
T cd05589         155 GDRTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLI  191 (324)
T ss_pred             CCcccccccCccccCHhHhcC-CCCCcccchhhHHHHH
Confidence            11        12238988876 4678899999995554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.98  E-value=2.5e-31  Score=253.54  Aligned_cols=177  Identities=28%  Similarity=0.362  Sum_probs=150.0

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|.+..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN   78 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            46999999999999999999999999997643222 23345667899999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-----  184 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-----  184 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||+ .||+||||||+|||+   +.++.+||+|||+++......     
T Consensus        79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (325)
T cd05594          79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKT  155 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCccccc
Confidence            99999999888889999999999999999999997 799999999999999   778899999999987543221     


Q ss_pred             ---CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 ---GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ---~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                         .....+||.+.+ ..|+.++|+||+|+++
T Consensus       156 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  186 (325)
T cd05594         156 FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM  186 (325)
T ss_pred             ccCCcccCCHHHHcc-CCCCCcccccccccee
Confidence               112238998865 4678999999995443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=9.4e-31  Score=253.03  Aligned_cols=192  Identities=21%  Similarity=0.280  Sum_probs=154.9

Q ss_pred             cccccc-ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCee
Q 042392           12 RYPILG-KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV   90 (436)
Q Consensus        12 ~~p~~~-~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv   90 (436)
                      .|++.. ...-.+..+|++.+.||+|+||.||+|.+..+|+.||+|++......  ......+.+|+.+++.+ +||||+
T Consensus         7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv   83 (359)
T cd07876           7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN--QTHAKRAYRELVLLKCV-NHKNII   83 (359)
T ss_pred             cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc--hhHHHHHHHHHHHHHhC-CCCCEe
Confidence            455432 23335778999999999999999999999999999999998754322  23345678999999999 699999


Q ss_pred             eceeeeecCC------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           91 ELKSAHEDET------AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        91 ~~~~~~~~~~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      ++++++....      .+|+||||+++ +|.+.+..  .+++..+..++.|++.||.|||++||+||||||+||++   +
T Consensus        84 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~  157 (359)
T cd07876          84 SLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---K  157 (359)
T ss_pred             eeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---C
Confidence            9999986543      57999999976 77776643  48899999999999999999999999999999999999   7


Q ss_pred             CCCcEEEEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          165 DNALLKVTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .++.+||+|||+|+.......       ....+||.+.+ ..|+.++|+||+|+++
T Consensus       158 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il  212 (359)
T cd07876         158 SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  212 (359)
T ss_pred             CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHH
Confidence            788999999999976533211       12338998876 4688899999996554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=3.3e-31  Score=252.36  Aligned_cols=180  Identities=25%  Similarity=0.372  Sum_probs=149.9

Q ss_pred             eeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           30 GRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      ++.||+|+||.||+|++.   .+++.||+|++..............+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEE
Confidence            367999999999999864   478899999987643222123345677899999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-  185 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-  185 (436)
                      ||+++++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+++....... 
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  156 (323)
T cd05584          80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTV  156 (323)
T ss_pred             eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCc
Confidence            999999999999988889999999999999999999999999999999999999   7788999999999875432211 


Q ss_pred             -------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 -------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 -------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                             ....+||.+.+ ..++.++|+||+|++++
T Consensus       157 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  191 (323)
T cd05584         157 THTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMY  191 (323)
T ss_pred             ccccCCCccccChhhccC-CCCCCcceecccHHHHH
Confidence                   12238888876 35778999999955543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=1.2e-30  Score=254.27  Aligned_cols=250  Identities=17%  Similarity=0.204  Sum_probs=179.5

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      +.++...++|++++.||+|+||.||+|++...     +..||||++.....   ......+.+|+.+++.+..||||+++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l  106 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNL  106 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            45666788999999999999999999987533     34699999865432   23345788999999999459999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHc---------------------------------------------------
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAK---------------------------------------------------  121 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~---------------------------------------------------  121 (436)
                      ++++.....+|+|||||++|+|.+++...                                                   
T Consensus       107 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (400)
T cd05105         107 LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT  186 (400)
T ss_pred             EEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence            99999999999999999999999988642                                                   


Q ss_pred             ---------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392          122 ---------------------------------------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus       122 ---------------------------------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                                                                   ..+++..+..++.|++.||.|||+.+|+||||||+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~  266 (400)
T cd05105         187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAAR  266 (400)
T ss_pred             ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChH
Confidence                                                         13667778899999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQAL  226 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l  226 (436)
                      |||+   +.++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|++++ +.++.      
T Consensus       267 Nill---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~-ellt~------  335 (400)
T cd05105         267 NVLL---AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLW-EIFSL------  335 (400)
T ss_pred             hEEE---eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHH-HHHHC------
Confidence            9999   6678899999999986543211          11238888765 45788999999965543 22210      


Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                            -..+..+......+...+..-     ....+..-.+.+.+.+..+++.|+++.+....+.
T Consensus       336 ------g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~  395 (400)
T cd05105         336 ------GGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE  395 (400)
T ss_pred             ------CCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence                  000001111111222211110     1122333344555567778888999888776543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.2e-31  Score=244.56  Aligned_cols=153  Identities=29%  Similarity=0.419  Sum_probs=139.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -..+|++++.||.|.-|+||+|+...++..+|+|++.+..... .....++..|-.||+.+ +||.++.+|..|+++...
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-RKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYS  152 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-hhHHHHHHHHHHHHHhc-CCCccchhhheeecccee
Confidence            3456899999999999999999999999999999998876554 34456677899999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 HVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |+|||||+||+|..+.+++.  .+++..++.++.+|+.||.|||..|||.|||||+|||+   .++|++.|+||-++...
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRC  229 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccC
Confidence            99999999999999998863  59999999999999999999999999999999999999   88999999999988653

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=8.3e-31  Score=254.27  Aligned_cols=189  Identities=22%  Similarity=0.265  Sum_probs=155.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTN-----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .|....++|++.+.||+|+||.||+|++..++     ..||+|++.....   ......+.+|+.+++.+.+||||++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~  108 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLL  108 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEe
Confidence            44566778999999999999999999875444     5799999875432   233456889999999995699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHc----------------------------------------------------
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAK----------------------------------------------------  121 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~----------------------------------------------------  121 (436)
                      +++...+.+|+|||||++|+|.+++...                                                    
T Consensus       109 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (374)
T cd05106         109 GACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS  188 (374)
T ss_pred             eEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence            9999999999999999999999998642                                                    


Q ss_pred             ------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          122 ------------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       122 ------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                                        .++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~  265 (374)
T cd05106         189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMND  265 (374)
T ss_pred             ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCC
Confidence                              136778889999999999999999999999999999999   67789999999999865432


Q ss_pred             CC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..          ....+||.+.+ ..|+.++|+||+|++++
T Consensus       266 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~  305 (374)
T cd05106         266 SNYVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLW  305 (374)
T ss_pred             cceeeccCCCCccceeCHHHhcC-CCCCccccHHHHHHHHH
Confidence            11          11338998765 46889999999965543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=8.1e-31  Score=249.19  Aligned_cols=176  Identities=23%  Similarity=0.370  Sum_probs=142.7

Q ss_pred             eeeecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CCeEEEE
Q 042392           30 GRMLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ETAVHVV  105 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~iv  105 (436)
                      .+.||+|+||.||+|+++  .+++.||+|.+.....      ...+.+|+.+++.+ +||||+++++++..  ...+|+|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLL   78 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEE
Confidence            468999999999999965  4678999999865422      23467899999999 69999999999854  4678999


Q ss_pred             EeccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-CCCCcEEEEecC
Q 042392          106 MELCQGGDLFDRIIAK---------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-DDNALLKVTDFG  175 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-~~~~~~kl~DFG  175 (436)
                      |||+.+ +|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          79 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            999965 898887642         248899999999999999999999999999999999999532 345789999999


Q ss_pred             CcccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          176 SALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       176 ~a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +|+.......           ....|||.+.+...|+.++|+||+|+++
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  206 (317)
T cd07868         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  206 (317)
T ss_pred             ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHH
Confidence            9987643211           1123899998877789999999995544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.97  E-value=2.5e-30  Score=247.34  Aligned_cols=183  Identities=20%  Similarity=0.260  Sum_probs=157.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|.+.....   ......+.+|+++++.+ +||||+++++++...+.+
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   78 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEI   78 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEE
Confidence            45789999999999999999999999999999998875432   23445688999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+   +.++.+||+|||++....
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhh
Confidence            99999999999999999888899999999999999999999975 79999999999999   677899999999997654


Q ss_pred             ccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          182 EEGG------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....      ....+||.+.+ ..++.++|+||+|+.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il  192 (333)
T cd06650         156 DSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  192 (333)
T ss_pred             hhccccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHH
Confidence            3211      12338998865 4578899999996554

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=7.6e-31  Score=249.94  Aligned_cols=178  Identities=24%  Similarity=0.364  Sum_probs=146.8

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH-HHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      +.||+|+||.||+|++..+|+.||||++.+..... ......+.+|.. +++.+ +||||+++++++.....+|+||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~   78 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYV   78 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCC
Confidence            46999999999999999999999999987543222 122334555554 45677 6999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC---
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE---  186 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~---  186 (436)
                      ++|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.........   
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (323)
T cd05575          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTST  155 (323)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCcccc
Confidence            999999999888889999999999999999999999999999999999999   77889999999998754322111   


Q ss_pred             -----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          187 -----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       187 -----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                           ...+||.+.+ ..|+.++|+||+|++++
T Consensus       156 ~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~  187 (323)
T cd05575         156 FCGTPEYLAPEVLRK-QPYDRTVDWWCLGAVLY  187 (323)
T ss_pred             ccCChhhcChhhhcC-CCCCccccccccchhhh
Confidence                 1238888765 46888999999955543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=6.2e-31  Score=250.80  Aligned_cols=178  Identities=25%  Similarity=0.384  Sum_probs=146.1

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH-HHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      +.||+|+||.||+|++..+++.||+|++.+..... ......+.+|.. +++.+ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYI   78 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCC
Confidence            46999999999999999999999999987543222 122233444444 56777 6999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      ++|+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+.......    
T Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~  155 (325)
T cd05602          79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTST  155 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCccc
Confidence            999999999888889999999999999999999999999999999999999   6788999999999975432111    


Q ss_pred             ----CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ----EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                          ....+||.+.+ ..|+.++|+||+|++++
T Consensus       156 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  187 (325)
T cd05602         156 FCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLY  187 (325)
T ss_pred             ccCCccccCHHHHcC-CCCCCccccccccHHHH
Confidence                12238998876 46888999999955443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=2.5e-31  Score=254.17  Aligned_cols=184  Identities=24%  Similarity=0.357  Sum_probs=155.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+++++.+++.||+|++.+..... ......+.+|+.++..+ +||||+++++++.....+|+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYL   78 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHH-hhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEE
Confidence            47999999999999999999999999999999986532222 22344578899999998 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++|+|.+++.+ ...+++..++.++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||++......
T Consensus        79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccC
Confidence            9999999999999987 3568999999999999999999999999999999999999   77889999999998765332


Q ss_pred             CC---------CCCCChHHHHH----HHHHHHhhhhhhHHHHH
Q 042392          184 GG---------EASDDTSVILR----MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~  213 (436)
                      ..         ....+||++.+    ...|+.++|+||+|+.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil  198 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM  198 (332)
T ss_pred             CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH
Confidence            11         12238998874    24578899999995544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=244.37  Aligned_cols=182  Identities=27%  Similarity=0.369  Sum_probs=153.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh-hhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEE
Confidence            4889999999999999999999999999999987543322 22345577899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++|+|..++...  ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCC
Confidence            9999999999888654  358999999999999999999999999999999999999   67789999999999876432


Q ss_pred             CC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..       ....+||.+.+ ..++.++|+||+|+++
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l  191 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLI  191 (285)
T ss_pred             CccccccCCCCccCcHHhcC-CCCCccccchhHHHHH
Confidence            21       12238888765 4678899999995544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.97  E-value=6.5e-33  Score=242.70  Aligned_cols=220  Identities=19%  Similarity=0.260  Sum_probs=183.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..+-|.+++.||+|+||.||+|.++++|..+|||.++...      ....+..|+.+|++| +.|+||++|+.|.....+
T Consensus        31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s------DLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDL  103 (502)
T KOG0574|consen   31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT------DLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDL  103 (502)
T ss_pred             hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc------hHHHHHHHHHHHHHc-CCchhhhhhhhhccCCce
Confidence            4455899999999999999999999999999999986543      355788999999999 799999999999888999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |||||||..|+..+.++.+ +++++.++..+++.-+.||.|||...-+|||||..|||+   +.+|..||+|||.|-.+.
T Consensus       104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLT  180 (502)
T KOG0574|consen  104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLT  180 (502)
T ss_pred             EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhh
Confidence            9999999999999999865 569999999999999999999999999999999999999   778999999999998776


Q ss_pred             ccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC---ChhhHHHHHHHhhhhCCCCCCccCHH----HH
Q 042392          182 EEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL---PGEETQALKEKFIEMDTDKNGTLSYD----EL  246 (436)
Q Consensus       182 ~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l---~~e~~~~l~~~F~~~D~~~~g~i~~~----eL  246 (436)
                      ..-...        ..|||++... .|....||||+|++.+...-   +..++..++.+|..--+++..+-.++    ++
T Consensus       181 DTMAKRNTVIGTPFWMAPEVI~EI-GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F  259 (502)
T KOG0574|consen  181 DTMAKRNTVIGTPFWMAPEVIEEI-GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEF  259 (502)
T ss_pred             hhHHhhCccccCcccccHHHHHHh-ccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHH
Confidence            532221        1299999875 58899999999888754432   56678889999977666665554444    44


Q ss_pred             HHHHHhc
Q 042392          247 RAGLTKV  253 (436)
Q Consensus       247 ~~~l~~~  253 (436)
                      ..+++++
T Consensus       260 ~DFi~~C  266 (502)
T KOG0574|consen  260 NDFIRSC  266 (502)
T ss_pred             HHHHHHH
Confidence            4455553

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=6.6e-31  Score=250.58  Aligned_cols=177  Identities=23%  Similarity=0.345  Sum_probs=146.3

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH-HHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      +.||+|+||.||+|++..+|+.||+|++.+..... ......+.+|.. +++.+ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFV   78 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCC
Confidence            46999999999999999999999999987643222 222344555655 46667 6999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      ++|+|..++...+.+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||++........    
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (325)
T cd05604          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTT  155 (325)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCccc
Confidence            999999999888889999999999999999999999999999999999999   7788999999999875432111    


Q ss_pred             ----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 ----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 ----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                          ....+||.+.+ ..|+.++|+||+|+++
T Consensus       156 ~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il  186 (325)
T cd05604         156 FCGTPEYLAPEVIRK-QPYDNTVDWWCLGAVL  186 (325)
T ss_pred             ccCChhhCCHHHHcC-CCCCCcCcccccccee
Confidence                11238888765 4678899999995544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.1e-31  Score=253.37  Aligned_cols=184  Identities=19%  Similarity=0.305  Sum_probs=153.2

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||.+......  ......+.+|+.+++.+ +||||+++++++...  
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   88 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS--LIHARRTYRELRLLKHM-KHENVIGLLDVFTPATS   88 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh--hHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccc
Confidence            4668899999999999999999999999999999998654321  12344577899999999 699999999987543  


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                          ..+|++++++ +++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        89 ~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg  163 (343)
T cd07878          89 IENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFG  163 (343)
T ss_pred             ccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCc
Confidence                4579999998 669987775 4569999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          176 SALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       176 ~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ++........     ....+||.+.+...|+.++|+||+|+.+
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  206 (343)
T cd07878         164 LARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM  206 (343)
T ss_pred             cceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence            9987654321     1223899988766788999999996554

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=253.16  Aligned_cols=185  Identities=25%  Similarity=0.372  Sum_probs=163.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ..|+..+.||+|+||.||+|.+..|++.||+|++.....   ......+.+|+.+|.++ ++|||.++|+.|.....+|+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwi   88 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWI   88 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHH
Confidence            458888999999999999999999999999999976643   23556789999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      +||||.||++.+.++..+.+.+.++..++++++.|+.|||.++.+|||||+.|||+   ...|.+||+|||.|..+....
T Consensus        89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechh
Confidence            99999999999999888777999999999999999999999999999999999999   566899999999998876643


Q ss_pred             CCCC--------CChHHHHHHHHHHHhhhhhhHHHHHHHhc
Q 042392          185 GEAS--------DDTSVILRMKQFRRMSKLKKLTVKVIVEY  217 (436)
Q Consensus       185 ~~~~--------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~  217 (436)
                      ....        .|||++. ...|+.++||||+|++.+--.
T Consensus       166 ~rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla  205 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELA  205 (467)
T ss_pred             hccccccccccccchhhhc-cccccchhhhhhhhHHHHHHh
Confidence            3321        2999999 468999999999988776443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=5.3e-30  Score=237.37  Aligned_cols=244  Identities=20%  Similarity=0.247  Sum_probs=181.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||||.+....... ......+.+|+.+++.+ +||||+++++++...+..|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD-AKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC-HHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEE
Confidence            57999999999999999999999999999999886543322 34455678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          105 VMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |+||+++++|.+++..    ...+++..+..++.|++.||.|||+++++||||||+||++   +.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceec
Confidence            9999999999988863    2348899999999999999999999999999999999999   67789999999998876


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .....        ....+||.+.+ ..++.++|+||+|+.++ +.+....            .......+..++...+..
T Consensus       157 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~-el~~g~~------------p~~~~~~~~~~~~~~~~~  222 (267)
T cd08228         157 SSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLY-EMAALQS------------PFYGDKMNLFSLCQKIEQ  222 (267)
T ss_pred             cchhHHHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHH-HHhcCCC------------CCccccccHHHHHHHHhc
Confidence            43221        12237888765 45778899999955443 3331110            011112222333333332


Q ss_pred             cCCC--C---CHHHHHH-HHHHHcCCCCCcccHHHHHHHHH
Q 042392          253 VGSM--L---TEFDVKQ-LMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       253 ~~~~--~---s~~~i~~-l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+.+  +   ....+.. +-+++..+++.|+++.|.+..+.
T Consensus       223 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~  263 (267)
T cd08228         223 CDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK  263 (267)
T ss_pred             CCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence            2211  1   1123444 44456778999999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3e-32  Score=257.66  Aligned_cols=186  Identities=27%  Similarity=0.369  Sum_probs=163.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ...|.=++.||.|+||.||-|++..+.+.||||.+.-..+.. .+....+..|+..|+.| .|||+|.+.++|......|
T Consensus        25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs-~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaW  102 (948)
T KOG0577|consen   25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAW  102 (948)
T ss_pred             HHHHHHHHHhcCCccceeEEeeccCccceeeeeecccccccc-HHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHH
Confidence            345777899999999999999999999999999987765544 55667899999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +|||||-| +..+++.-. +++.+.++..|..+.+.||.|||+.+.||||||..|||+   ...|.|||+|||.|....+
T Consensus       103 LVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~P  178 (948)
T KOG0577|consen  103 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAP  178 (948)
T ss_pred             HHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCc
Confidence            99999976 888887653 569999999999999999999999999999999999999   7889999999999988876


Q ss_pred             cCCCCCC----ChHHHHHH--HHHHHhhhhhhHHHHHHH
Q 042392          183 EGGEASD----DTSVILRM--KQFRRMSKLKKLTVKVIV  215 (436)
Q Consensus       183 ~~~~~~~----~pe~~~~~--~~~~~~~d~~s~~~~~~~  215 (436)
                      ...-..+    |||+++.+  ++|+.++||||+|++++-
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIE  217 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  217 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhh
Confidence            5443322    99999865  579999999999998753

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=6.9e-30  Score=236.61  Aligned_cols=183  Identities=16%  Similarity=0.198  Sum_probs=152.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+|++.+.||+|+||.||+|.++   ..+..||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   79 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS---DKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGN   79 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC---HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCC
Confidence            357999999999999999999875   4567899999875432   23345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++|+|.+++... ..+++..++.++.|++.||.|||+++++||||||+||++   +.++.++++|||.+..
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~  156 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQE  156 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccc
Confidence            999999999999999999874 468999999999999999999999999999999999999   6788999999998765


Q ss_pred             ccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......         ....+||.+.+ ..++.++|+||+|+.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~  199 (266)
T cd05064         157 DKSEAIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMW  199 (266)
T ss_pred             ccccchhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHH
Confidence            432110         12238888765 57889999999955543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.8e-30  Score=259.58  Aligned_cols=181  Identities=21%  Similarity=0.290  Sum_probs=152.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC-CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST-NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...|.+.+.||+|+||.||+|.+..+ +..||+|.+....    ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~  140 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKL  140 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEE
Confidence            34599999999999999999998877 7889999765432    23345678899999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          103 HVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      |+||||++||+|.+++..    ..++++..+..++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||+|+
T Consensus       141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~  217 (478)
T PTZ00267        141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSK  217 (478)
T ss_pred             EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCce
Confidence            999999999999988754    3458999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .+.....          ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       218 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l  261 (478)
T PTZ00267        218 QYSDSVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVIL  261 (478)
T ss_pred             ecCCccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHH
Confidence            7643211          11238888765 5688999999995444

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=1.6e-30  Score=243.56  Aligned_cols=251  Identities=20%  Similarity=0.253  Sum_probs=176.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeec-----
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHED-----   98 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~-----   98 (436)
                      +|++.+.||+|+||.||+|+++.+++.||+|.+.......  .......+|+.+++.+.  +||||+++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence            5899999999999999999999999999999987543221  12234567777776653  59999999998764     


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ...+++||||+++ +|.+++....  .+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus        79 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~  154 (288)
T cd07863          79 ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGL  154 (288)
T ss_pred             CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCc
Confidence            3458999999985 9999887643  48999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCccC
Q 042392          177 ALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       177 a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      +........       ....+||.+.+ ..++.++|+||+|+++ .+.+       .......+..++..+..+......
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l-~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T cd07863         155 ARIYSCQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIF-AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  232 (288)
T ss_pred             cccccCcccCCCccccccccCchHhhC-CCCCCcchhhhHHHHH-HHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence            987653322       12338998875 4688999999996554 3332       112233344444333222110000


Q ss_pred             H------HHH----HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          243 Y------DEL----RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       243 ~------~eL----~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .      ..+    ...+..+....+.+-.+.+.+++..|+..|++..|.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0      000    00011122234444456666677788888888777664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=4.5e-30  Score=248.74  Aligned_cols=184  Identities=21%  Similarity=0.277  Sum_probs=152.0

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-.+.++|++.+.||+|+||.||+|.+..+++.||||++......  ......+.+|+.+++.+ +||||+++++++...
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~   95 (364)
T cd07875          19 TFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN--QTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQ   95 (364)
T ss_pred             hhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC--chhHHHHHHHHHHHHhc-CCCCccccceeeccc
Confidence            335678999999999999999999999999999999998754322  23345678999999999 699999999987543


Q ss_pred             ------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392          100 ------TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus       100 ------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                            ..+|+||||+++ +|.+.+..  .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|
T Consensus        96 ~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~D  169 (364)
T cd07875          96 KSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILD  169 (364)
T ss_pred             ccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEe
Confidence                  358999999976 88877753  48889999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|+.......       ....+||.+.+ ..|+.++|+||+|+++
T Consensus       170 fG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il  215 (364)
T cd07875         170 FGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  215 (364)
T ss_pred             CCCccccCCCCcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHH
Confidence            999986544221       12238998876 4688899999995544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=2.7e-30  Score=258.62  Aligned_cols=186  Identities=21%  Similarity=0.308  Sum_probs=154.3

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +....+|++.+.||+|+||.||+|++..+++.||||++......  ......+.+|+.++..+ +|+||+++++.+....
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~--~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS--EADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKD  104 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC--HHHHHHHHHHHHHHhcC-CCCcEEEeecceeccc
Confidence            44567999999999999999999999999999999998765432  23445678999999999 6999999988775432


Q ss_pred             --------eEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392          101 --------AVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus       101 --------~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                              .+++||||+++|+|.+++...    ..+++..+..++.|++.||.|||+.+|+||||||+|||+   +.++.
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~  181 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGL  181 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCC
Confidence                    378999999999999998753    358999999999999999999999999999999999999   67889


Q ss_pred             EEEEecCCcccccccC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          169 LKVTDFGSALLFEEEG----------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +||+|||+++.+....          .....+||.+.+ ..|+.++|+||+|+++
T Consensus       182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvil  235 (496)
T PTZ00283        182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLL  235 (496)
T ss_pred             EEEEecccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHH
Confidence            9999999998654321          111238888865 5688999999995544

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=1.5e-29  Score=236.27  Aligned_cols=235  Identities=13%  Similarity=0.078  Sum_probs=174.3

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----CCeEEEEE
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----ETAVHVVM  106 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~~~~~iv~  106 (436)
                      ..||+|++|.||+|..  +|+.||||.+....... ......+.+|+.+|+.+ +||||+++++++.+    ...+++||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~  101 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGH-KVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLIL  101 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEecccccccc-HHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEE
Confidence            6799999999999997  68899999987653322 23346678999999999 69999999999876    45789999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-  184 (436)
                      |||++|+|.+++.+.+.+++.....++.|++.|+.|||+ .+++||||||+||++   +.++.+||+|||+++...... 
T Consensus       102 Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~~  178 (283)
T PHA02988        102 EYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPPF  178 (283)
T ss_pred             EeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhccccc
Confidence            999999999999888889999999999999999999998 499999999999999   778899999999998654322 


Q ss_pred             ----CCCCCChHHHHHH-HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc----CC
Q 042392          185 ----GEASDDTSVILRM-KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GS  255 (436)
Q Consensus       185 ----~~~~~~pe~~~~~-~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~----~~  255 (436)
                          .....+||.+.+. ..|+.++|+||+|++++ +.+...              .+-...+..++...+...    ..
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~-el~~g~--------------~Pf~~~~~~~~~~~i~~~~~~~~~  243 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLW-EIFTGK--------------IPFENLTTKEIYDLIINKNNSLKL  243 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHH-HHHHCC--------------CCCCCCCHHHHHHHHHhcCCCCCC
Confidence                1223489988763 57899999999965543 322110              011112233333322111    11


Q ss_pred             C-CCHHHHHHHH-HHHcCCCCCcccHHHHHHHHH
Q 042392          256 M-LTEFDVKQLM-EAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       256 ~-~s~~~i~~l~-~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      + ....++..++ +.+..|++.|+++.|.+..+.
T Consensus       244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~  277 (283)
T PHA02988        244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS  277 (283)
T ss_pred             CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            1 1223444444 456778999999999987654

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=4.9e-30  Score=242.00  Aligned_cols=183  Identities=21%  Similarity=0.266  Sum_probs=154.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|++..+++.||+|.+......   .....+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~   80 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLT   80 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEE
Confidence            46799999999999999999999999999999998654322   2234567899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++... ..+++..++.++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++.....
T Consensus        81 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~  156 (301)
T cd07873          81 LVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSI  156 (301)
T ss_pred             EEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCC
Confidence            99999975 999988764 458899999999999999999999999999999999999   7788999999999976532


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+.+...++.++|+||+|++++
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  196 (301)
T cd07873         157 PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY  196 (301)
T ss_pred             CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHH
Confidence            221        12238998877666888999999965543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=3.9e-30  Score=241.32  Aligned_cols=182  Identities=21%  Similarity=0.284  Sum_probs=145.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECC-CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeee----
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENS-TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHE----   97 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~----   97 (436)
                      .+|++.+.||+|+||.||+|++.. +++.||+|.+.......  .......+|+.+++.+.  +||||+++++++.    
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence            379999999999999999999864 46889999987543322  22334567888777663  5999999999875    


Q ss_pred             -cCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           98 -DETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        98 -~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                       ....+++||||+++ +|.+++...  ..+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.+||+||
T Consensus        79 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Df  154 (290)
T cd07862          79 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADF  154 (290)
T ss_pred             CCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccc
Confidence             34569999999974 999998764  348899999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|........       ....+||.+.+ ..++.++|+||+|+.+
T Consensus       155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il  199 (290)
T cd07862         155 GLARIYSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIF  199 (290)
T ss_pred             cceEeccCCcccccccccccccChHHHhC-CCCCCccchHHHHHHH
Confidence            99986543321       12238888865 4678899999995544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=5.3e-30  Score=265.29  Aligned_cols=195  Identities=24%  Similarity=0.381  Sum_probs=158.6

Q ss_pred             ccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      .-.+.+....+|++++.||+|+||.||+|++..++..||+|++......  ......+.+|+.+++.| +|||||+++++
T Consensus         4 ~~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~--e~~~~~~~~EI~IL~~L-~HPNIVrl~d~   80 (1021)
T PTZ00266          4 KYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK--EREKSQLVIEVNVMREL-KHKNIVRYIDR   80 (1021)
T ss_pred             cccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC--HHHHHHHHHHHHHHHHc-CCCCcCeEEEE
Confidence            3456677888999999999999999999999999999999998765432  23456788999999999 69999999998


Q ss_pred             eec--CCeEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc-------CcccccCCCCcceeec
Q 042392           96 HED--ETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSM-------GVMHRDLKPENFCFIS  162 (436)
Q Consensus        96 ~~~--~~~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~-------~i~Hrdlkp~Nill~~  162 (436)
                      |..  ...+|||||||++|+|.++|...    +.+++..++.++.||+.||.|||..       +|+||||||+|||+..
T Consensus        81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            854  45799999999999999998753    5699999999999999999999984       4999999999999943


Q ss_pred             c--------------CCCCcEEEEecCCcccccccC-------CCCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          163 R--------------DDNALLKVTDFGSALLFEEEG-------GEASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       163 ~--------------~~~~~~kl~DFG~a~~~~~~~-------~~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                      .              +..+.+||+|||++..+....       .....+||++.+. ..|+.++|+||+|+++
T Consensus       161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~IL  233 (1021)
T PTZ00266        161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCII  233 (1021)
T ss_pred             CccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHH
Confidence            1              123458999999998764321       1122389988753 4578899999995544

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=1.9e-30  Score=242.65  Aligned_cols=181  Identities=23%  Similarity=0.315  Sum_probs=153.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|++..+|+.||+|.+......  ......+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEE
Confidence            589999999999999999999999999999998754322  22334577899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          106 MELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      +||+++ +|.+++.+ .+++++..++.++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++.......
T Consensus        78 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          78 FEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCC
Confidence            999975 88888865 4568999999999999999999999999999999999999   678899999999998654321


Q ss_pred             C--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 G--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .        ....+||.+.+...++.++|+||+|+.+
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  190 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF  190 (284)
T ss_pred             CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHH
Confidence            1        1223899887766678899999995543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=5.1e-31  Score=250.98  Aligned_cols=178  Identities=25%  Similarity=0.364  Sum_probs=146.6

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH-HHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      ++||+|+||.||+|++..+++.||+|++.+..... ......+.+|.. +++.+ +||||+++++++...+.+|+|||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~   78 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK-KKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYV   78 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCC
Confidence            46999999999999999999999999987543222 222334555554 57778 6999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      ++|+|...+.....+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++........    
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (321)
T cd05603          79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTST  155 (321)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCcccc
Confidence            999999999888889999999999999999999999999999999999999   7788999999999875322111    


Q ss_pred             ----CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ----EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                          ....+||.+.+ ..|+.++|+||+|++++
T Consensus       156 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  187 (321)
T cd05603         156 FCGTPEYLAPEVLRK-EPYDRTVDWWCLGAVLY  187 (321)
T ss_pred             ccCCcccCCHHHhcC-CCCCCcCcccccchhhh
Confidence                12238888765 46888999999955543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=5e-30  Score=239.86  Aligned_cols=251  Identities=22%  Similarity=0.269  Sum_probs=181.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|++|.||+|++..++..||+|.+......  ......+.+|+.+++.+ +||||+++++++..+..+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   77 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLI   77 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEE
Confidence            589999999999999999999999999999998654322  12335678899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          106 MELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||++ ++|.+++...   ..+++..++.++.||+.||.|||+.+|+||||||+||++   +.++.++|+|||++.....
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~  153 (285)
T cd07861          78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGI  153 (285)
T ss_pred             EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCC
Confidence            99997 5898888653   458999999999999999999999999999999999999   7788999999999876533


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc----cCH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT----LSY  243 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~----i~~  243 (436)
                      ...        ....+||.+.+...++.++|+||+|+.+ .+.+       ...+...+...+..+.......    ...
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         154 PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIF-AEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence            211        1223899887766678899999995544 3332       1222333333333332221111    011


Q ss_pred             HHHHHHH--------HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          244 DELRAGL--------TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       244 ~eL~~~l--------~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .......        .......+.+..+.+-+++..|++.|++..+.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            1111110        0111234555556666677778888888777653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=7.3e-31  Score=244.98  Aligned_cols=175  Identities=26%  Similarity=0.359  Sum_probs=146.7

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||+|+||+||+|.+..+++.||+|.+....... ......+..|+.+++.+ +||||+++.+++.....+|+||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK-RKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh-hHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            699999999999999999999999987543222 22334567899999999 7999999999999999999999999999


Q ss_pred             ChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---
Q 042392          113 DLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---  185 (436)
Q Consensus       113 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---  185 (436)
                      +|..++..    ...+++..+..++.||+.||.|||+.+|+||||||+||++   +.++.++|+|||++..+.....   
T Consensus        79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCcccc
Confidence            99887753    2458999999999999999999999999999999999999   6788999999999976543221   


Q ss_pred             -----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 -----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 -----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                           ....+||.+.+ ..++.++|+||+|+++
T Consensus       156 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslG~il  187 (280)
T cd05608         156 GYAGTPGFMAPELLQG-EEYDFSVDYFALGVTL  187 (280)
T ss_pred             ccCCCcCccCHHHhcC-CCCCccccHHHHHHHH
Confidence                 12238998876 4678899999995554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.8e-31  Score=251.55  Aligned_cols=177  Identities=27%  Similarity=0.364  Sum_probs=146.9

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeecCCeEEEEEeccC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      ||+|+||.||+|++..+++.||||++.+..... ........+|..++..+.  +||||+++++++.....+|+||||++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~   79 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS   79 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence            799999999999999999999999986543221 122334456667776653  69999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.++|+|||++........     
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~  156 (330)
T cd05586          80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTF  156 (330)
T ss_pred             CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCc
Confidence            99999999888889999999999999999999999999999999999999   7788999999999876432211     


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                         ....+||.+.+...|+.++|+||+|+++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~~DvwslGvil  187 (330)
T cd05586         157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV  187 (330)
T ss_pred             cCCccccCHHHHcCCCCCCCccceeccccEE
Confidence               1223899987656688999999995543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=3.9e-30  Score=248.36  Aligned_cols=184  Identities=21%  Similarity=0.280  Sum_probs=152.0

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-.+.++|++.+.||+|+||.||+|.+..+++.||||.+......  ......+.+|+.+++.+ +||||+++++++...
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   88 (355)
T cd07874          12 TFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--QTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQ   88 (355)
T ss_pred             hhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC--hHHHHHHHHHHHHHHHh-CCCchhceeeeeecc
Confidence            335778999999999999999999999999999999998654322  23345677899999999 699999999988643


Q ss_pred             ------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392          100 ------TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus       100 ------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                            ..+|+||||+++ +|.+.+..  .+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        89 ~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~D  162 (355)
T cd07874          89 KSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILD  162 (355)
T ss_pred             ccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEee
Confidence                  357999999976 78777754  48889999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|+.......       ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       163 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il  208 (355)
T cd07874         163 FGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  208 (355)
T ss_pred             CcccccCCCccccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHH
Confidence            999987544221       12238998876 4688899999996544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.3e-30  Score=247.83  Aligned_cols=181  Identities=27%  Similarity=0.441  Sum_probs=150.2

Q ss_pred             eeeecccCCeEEEEEEE---CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           30 GRMLGRGRFGVTYLCTE---NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      ++.||+|+||.||++++   ..+|+.||+|++......  ......+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   77 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK--VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLIL   77 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEE
Confidence            36799999999999986   357899999999754322  12334567899999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE  186 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~  186 (436)
                      ||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.........
T Consensus        78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~  154 (318)
T cd05582          78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKK  154 (318)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCc
Confidence            999999999999888889999999999999999999999999999999999999   77889999999999865433111


Q ss_pred             --------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          187 --------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       187 --------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                              ...+||.+.+ ..++.++|+||+|+ ++.+.+
T Consensus       155 ~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~-il~el~  192 (318)
T cd05582         155 AYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGV-LMFEML  192 (318)
T ss_pred             eecccCChhhcCHHHHcC-CCCCCccceeccce-Eeeeec
Confidence                    1227888765 45788999999954 444443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=6.6e-31  Score=267.06  Aligned_cols=272  Identities=20%  Similarity=0.261  Sum_probs=188.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ....+|..++.||+|+||.||+|+++-+|+.||||.++... .  ...-..+.+|+.++.+| +|||||+++..|..   
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s--~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S--DKLYSKILREVKLLARL-NHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-H--HHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCC
Confidence            34566888999999999999999999999999999998775 2  34556789999999999 79999999876611   


Q ss_pred             --------------------------------------------------------------------------------
Q 042392           99 --------------------------------------------------------------------------------   98 (436)
Q Consensus        99 --------------------------------------------------------------------------------   98 (436)
                                                                                                      
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------C--------CeEEEEEeccCCCChHHHHHHcCCC-CHHHHHHHHHHHHHHHH
Q 042392           99 ----------------------------E--------TAVHVVMELCQGGDLFDRIIAKGYY-SERDAAPVLRAIVNAVN  141 (436)
Q Consensus        99 ----------------------------~--------~~~~iv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~qi~~~l~  141 (436)
                                                  +        ..+||-||||+.-.|.+++.+.... ....+|++++||++||.
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLa  711 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLA  711 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHH
Confidence                                        0        2379999999985555555444333 47889999999999999


Q ss_pred             HHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc---------------cCC---C--------CCCChHHHH
Q 042392          142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE---------------EGG---E--------ASDDTSVIL  195 (436)
Q Consensus       142 ~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~---------------~~~---~--------~~~~pe~~~  195 (436)
                      |+|++|||||||||.||++   ++.+.|||+|||+|.....               .+.   .        ...|||++.
T Consensus       712 YIH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~  788 (1351)
T KOG1035|consen  712 YIHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS  788 (1351)
T ss_pred             HHHhCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence            9999999999999999999   7889999999999987320               000   0        011999999


Q ss_pred             HHH--HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCC
Q 042392          196 RMK--QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG  273 (436)
Q Consensus       196 ~~~--~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~  273 (436)
                      +..  .|+.++|++|+|+.++-...+..  -.|.++...-+ =.+|.+...      ..+..+--..+...+-..+..|+
T Consensus       789 ~~~~~~Yn~KiDmYSLGIVlFEM~yPF~--TsMERa~iL~~-LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP  859 (1351)
T KOG1035|consen  789 DTSSNKYNSKIDMYSLGIVLFEMLYPFG--TSMERASILTN-LRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDP  859 (1351)
T ss_pred             ccccccccchhhhHHHHHHHHHHhccCC--chHHHHHHHHh-cccCCCCCC------cccccccchHHHHHHHHHhcCCC
Confidence            887  79999999999666653322211  11222221111 113333222      01111122344555555677788


Q ss_pred             CCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCc
Q 042392          274 NGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY  312 (436)
Q Consensus       274 ~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~  312 (436)
                      +.|.+-.|.+..-....   ...++...++....+.+|+
T Consensus       860 ~kRPtA~eLL~s~llpp---e~~el~~~~~h~~~~~~~k  895 (1351)
T KOG1035|consen  860 SKRPTATELLNSELLPP---EESELLVFLQHLYIEQLGK  895 (1351)
T ss_pred             ccCCCHHHHhhccCCCc---cchHHHHHHHHHHHHHHHH
Confidence            99999988886522221   3445556666665555554

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=1.1e-29  Score=237.75  Aligned_cols=184  Identities=23%  Similarity=0.356  Sum_probs=156.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD--PVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC--ccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEE
Confidence            4799999999999999999999999999999998654322  12234578999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||++++.|..++.....+++..++.++.|++.||.|||+.+++||||||+||++   +.++.++|+|||++.......
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             EEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCc
Confidence            99999998887777666679999999999999999999999999999999999999   677899999999998765433


Q ss_pred             C--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 G--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .        ....+||.+.+...++.++|+||+|+.+.
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~  192 (286)
T cd07847         155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA  192 (286)
T ss_pred             ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence            1        12238998877667888999999965543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=236.63  Aligned_cols=188  Identities=26%  Similarity=0.373  Sum_probs=165.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...-+++|..+++||+|+||+|.+|+.+.+++.||||++++..... ....+.-+.|-.+|+.+ .||.+..+.-.|+..
T Consensus       163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia-kdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~  240 (516)
T KOG0690|consen  163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA-KDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQ  240 (516)
T ss_pred             ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee-hHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccC
Confidence            4457789999999999999999999999999999999998876554 44556678899999999 599999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +++|.||||+.||.|+-.+.+...+++..++.+...|+.||.|||+++||.||||.+|+|+   +.+|++||+|||+++.
T Consensus       241 drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE  317 (516)
T KOG0690|consen  241 DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKE  317 (516)
T ss_pred             ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchh
Confidence            9999999999999999999988889999999999999999999999999999999999999   8999999999999986


Q ss_pred             ccccCCCCCC--------ChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGEASD--------DTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      -...+.....        |||++.. ..|..++|.|.+|+.+
T Consensus       318 ~I~~g~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVM  358 (516)
T KOG0690|consen  318 EIKYGDTTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVM  358 (516)
T ss_pred             cccccceeccccCChhhcCchhhcc-ccccceeehhhhhHHH
Confidence            5443333222        8888876 5799999999996554

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=2.5e-29  Score=237.34  Aligned_cols=241  Identities=17%  Similarity=0.192  Sum_probs=175.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCce--EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMP--YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .+|++.+.||+|+||.||+|.+..++..  +|+|.+.....   ......+.+|+.++..+.+||||+++++++...+.+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~   83 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL   83 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC---HHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence            4799999999999999999998877764  46666543221   234457888999999996699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392          103 HVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      |+||||+++++|.+++...+                .+++..++.++.|++.|+.|||++|++||||||+|||+   +.+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~  160 (303)
T cd05088          84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GEN  160 (303)
T ss_pred             eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCC
Confidence            99999999999999997543                47888999999999999999999999999999999999   678


Q ss_pred             CcEEEEecCCcccccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC--hhhHHHHHHHhhhhCCCC
Q 042392          167 ALLKVTDFGSALLFEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP--GEETQALKEKFIEMDTDK  237 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~--~e~~~~l~~~F~~~D~~~  237 (436)
                      +.+||+|||++.......       .....+||.+.+ ..++.++|+||+|+.+. +.++  ...       |       
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt~g~~p-------~-------  224 (303)
T cd05088         161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLW-EIVSLGGTP-------Y-------  224 (303)
T ss_pred             CcEEeCccccCcccchhhhcccCCCcccccCHHHHhc-cCCcccccchhhhhHHH-HHHhcCCCC-------c-------
Confidence            899999999986432111       111337887755 45788999999955543 3321  100       0       


Q ss_pred             CCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          238 NGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       238 ~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+ .+..++...+..     .....+..-.+.+.+++..+.+.|.+..+.+..+..
T Consensus       225 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         225 CG-MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             cc-CChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            00 111111111111     011223333455556677889999999998876543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=4.8e-29  Score=230.83  Aligned_cols=184  Identities=22%  Similarity=0.314  Sum_probs=155.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+....... ......+.+|+.+++.+ +||||+++++++...+..++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD-AKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc-hhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEE
Confidence            57999999999999999999999899999999987543322 33456788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          105 VMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ||||+++++|..++...    ..+++..+..++.|++.|+.|||+.|++||||+|+||++   +.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeec
Confidence            99999999999988652    348899999999999999999999999999999999999   67889999999998765


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....        ....+||.+.+ ..++.++|+|++|+.++
T Consensus       157 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~  197 (267)
T cd08224         157 SSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLY  197 (267)
T ss_pred             cCCCcccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHH
Confidence            43221        11237887765 45788999999965543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=2.1e-29  Score=239.37  Aligned_cols=241  Identities=18%  Similarity=0.201  Sum_probs=176.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCce----EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMP----YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+|++.+.||+|+||.||+|++..++..    ||+|++.....   ......+.+|+.+++.+ +||||+++++++...
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~   81 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASV-DNPHVCRLLGICLTS   81 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC
Confidence            35799999999999999999998766654    89998864322   23445688999999999 699999999998764


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                       ..++|+||+++|+|.+++.... .++...+..++.||+.||.|||+.+|+||||||+||++   +.++.+||+|||+++
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~  157 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAK  157 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccc
Confidence             5789999999999999998753 58889999999999999999999999999999999999   677899999999998


Q ss_pred             cccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .+......          ...+||.+.+ ..++.++|+||+|++++ +.++             ++..+-......++..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~-el~t-------------~g~~p~~~~~~~~~~~  222 (316)
T cd05108         158 LLGADEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVW-ELMT-------------FGSKPYDGIPASEISS  222 (316)
T ss_pred             cccCCCcceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHH-HHHc-------------CCCCCCCCCCHHHHHH
Confidence            76532211          1237887765 46788999999965553 2211             0111111123333333


Q ss_pred             HHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          249 GLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       249 ~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+..-.     ...+..-...+.+++..+++.|.++.+.+..+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~  266 (316)
T cd05108         223 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  266 (316)
T ss_pred             HHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            333211     111233334455566778888999988886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=1.8e-29  Score=242.52  Aligned_cols=246  Identities=18%  Similarity=0.219  Sum_probs=176.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEE-----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTE-----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      |.-..++|++.+.||+|+||.||+|.+     ..+++.||||.+.....   ......+.+|+.++..+.+||||+++++
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~   78 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLG   78 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcc
Confidence            344567899999999999999999985     34678999999865432   2234568899999999977899999999


Q ss_pred             eeecC-CeEEEEEeccCCCChHHHHHHcC---------------------------------------------------
Q 042392           95 AHEDE-TAVHVVMELCQGGDLFDRIIAKG---------------------------------------------------  122 (436)
Q Consensus        95 ~~~~~-~~~~iv~e~~~~g~L~~~l~~~~---------------------------------------------------  122 (436)
                      ++... ..+++|||||++|+|.+++....                                                   
T Consensus        79 ~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (343)
T cd05103          79 ACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSL  158 (343)
T ss_pred             eeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcc
Confidence            87654 56899999999999999987531                                                   


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-
Q 042392          123 ----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-  185 (436)
Q Consensus       123 ----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-  185 (436)
                                      .++...+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||++........ 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~  235 (343)
T cd05103         159 SDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDY  235 (343)
T ss_pred             ccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcch
Confidence                            25677788899999999999999999999999999999   6778999999999986532111 


Q ss_pred             ---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC--ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh--
Q 042392          186 ---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL--PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--  252 (436)
Q Consensus       186 ---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~--  252 (436)
                               ....+||.+.+ ..++.++|+|++|++++ +.+  +..              +..+.....++...+..  
T Consensus       236 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~~g~~--------------p~~~~~~~~~~~~~~~~~~  299 (343)
T cd05103         236 VRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW-EIFSLGAS--------------PYPGVKIDEEFCRRLKEGT  299 (343)
T ss_pred             hhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH-HHHHCCCC--------------CCCCccccHHHHHHHhccC
Confidence                     11237887765 56788999999965543 222  110              00011111112221111  


Q ss_pred             ---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          253 ---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       253 ---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                         .....+.+-.+.+......++..|.++.|.+..+.
T Consensus       300 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~  337 (343)
T cd05103         300 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  337 (343)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence               11123344455566667788899999999887653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=6.3e-30  Score=246.64  Aligned_cols=181  Identities=23%  Similarity=0.310  Sum_probs=149.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|++++.||+|+||.||+|++..+++.||||++.....   ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE---DTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc---HHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeE
Confidence            35679999999999999999999999999999999865432   23456788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++|+|...    ...++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.+..
T Consensus       148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceeccc
Confidence            999999999998643    235678888999999999999999999999999999999   7788999999999987643


Q ss_pred             cCC--------CCCCChHHHHHH----HHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRM----KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~----~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+...    ..++.++|+||+|++++
T Consensus       221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~  264 (353)
T PLN00034        221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL  264 (353)
T ss_pred             ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHH
Confidence            221        122388876431    22345899999965554

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=6.8e-30  Score=236.69  Aligned_cols=184  Identities=25%  Similarity=0.313  Sum_probs=155.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++.....    .....+.+|+.+++.+ +||||+++++++.....+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~   81 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKL   81 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEE
Confidence            45679999999999999999999999999999999865432    2234578899999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++++|.+++...+++++..+..++.|++.|+.|||+.+|+||||||+||++   +.++.++|+|||++.....
T Consensus        82 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06646          82 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITA  158 (267)
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecc
Confidence            9999999999999999888889999999999999999999999999999999999999   6778899999999986643


Q ss_pred             cCC--------CCCCChHHHHH--HHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILR--MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~--~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+..  ...++.++|+||+|++++
T Consensus       159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~  200 (267)
T cd06646         159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAI  200 (267)
T ss_pred             cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHH
Confidence            221        11237887742  234678899999955443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2e-29  Score=232.96  Aligned_cols=184  Identities=26%  Similarity=0.376  Sum_probs=156.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ++|++.+.||+|++|.||+|.+..++++||+|.+....... .......+.+|+.+++.+ +||||+++++++.....+|
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence            46999999999999999999999999999999987543221 122345688999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|+||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||+++.....
T Consensus        81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~  157 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTI  157 (263)
T ss_pred             EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecccc
Confidence            999999999999999888889999999999999999999999999999999999999   67789999999999765332


Q ss_pred             CC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GG-----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..           ....+||.+.+ ..++.++|+||+|+++
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  197 (263)
T cd06625         158 CSSGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTV  197 (263)
T ss_pred             ccccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHH
Confidence            11           12237888766 4578899999995554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=7.6e-30  Score=236.37  Aligned_cols=185  Identities=24%  Similarity=0.337  Sum_probs=157.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|++..+++.||+|+++....    .....+.+|+.+++.+ +||||+++++++...+.
T Consensus         6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~   80 (267)
T cd06645           6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG----EDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDK   80 (267)
T ss_pred             CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCE
Confidence            345689999999999999999999999999999999865432    2234577899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||+++++|.+++...+.+++..++.++.|++.|+.|||+.|++||||||+||++   +.++.++|+|||++....
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          81 LWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             EEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEcc
Confidence            99999999999999999888889999999999999999999999999999999999999   677899999999987654


Q ss_pred             ccCC--------CCCCChHHHH--HHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG--------EASDDTSVIL--RMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~--------~~~~~pe~~~--~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....        ....+||.+.  ....++.++|+||+|++++
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~  200 (267)
T cd06645         158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAI  200 (267)
T ss_pred             CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHH
Confidence            3211        1123888764  2335778999999965544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-30  Score=222.27  Aligned_cols=194  Identities=22%  Similarity=0.268  Sum_probs=160.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      -..+|++.+.||.|+|+.||+++...+++.||+|.+....    .+..+..++|+...+++ +||||++++++...+   
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKD   93 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhcc
Confidence            3468999999999999999999999999999999997765    34567789999999999 799999999876443   


Q ss_pred             --CeEEEEEeccCCCChHHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEE
Q 042392          100 --TAVHVVMELCQGGDLFDRIIAK---G-YYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus       100 --~~~~iv~e~~~~g~L~~~l~~~---~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                        ...|++++|...|+|.+.+...   + .+++.++..++.+|++||.+||+..  +.||||||.|||+   ...+.++|
T Consensus        94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl  170 (302)
T KOG2345|consen   94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVL  170 (302)
T ss_pred             CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEE
Confidence              3499999999999999988763   2 5999999999999999999999998  9999999999999   56789999


Q ss_pred             EecCCcccccccC-----------------CCCCCChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHH
Q 042392          172 TDFGSALLFEEEG-----------------GEASDDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQ  224 (436)
Q Consensus       172 ~DFG~a~~~~~~~-----------------~~~~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~  224 (436)
                      .|||.+....-.-                 .....|||.+.-.  ...+.+.||||+|+++.+.++.....+
T Consensus       171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence            9999998754321                 1122378876532  234678999999888887777554433

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=3.6e-29  Score=231.35  Aligned_cols=241  Identities=18%  Similarity=0.209  Sum_probs=181.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +.....|.+.+.||+|+||.||+|.+..++..||+|.+....     .....+.+|+.+++.+ +||||+++++++....
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   75 (263)
T cd05052           2 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREP   75 (263)
T ss_pred             CCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCC
Confidence            344567999999999999999999999999999999986432     2245688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+++||||+++++|.+++....  .+++..++.++.|++.||.|||+.+++||||||+||++   +.++.+||+|||++.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~  152 (263)
T cd05052          76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSR  152 (263)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCcccc
Confidence            9999999999999999997643  48889999999999999999999999999999999999   678899999999998


Q ss_pred             cccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      ........         ...+||.+.+ ..++.++|+||+|+ ++.+.++ ..             .+..+ .+..++..
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~-il~el~t~g~-------------~p~~~-~~~~~~~~  216 (263)
T cd05052         153 LMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGV-LLWEIATYGM-------------SPYPG-IDLSQVYE  216 (263)
T ss_pred             ccccceeeccCCCCCccccCCHHHhcc-CCCCchhHHHHHHH-HHHHHHcCCC-------------CCCCC-CCHHHHHH
Confidence            76543211         1237887754 46778899999954 4433332 10             00111 12223322


Q ss_pred             HHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+.. .    ....+.+-.+.+.+++..+++.|+++.+....+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l  259 (263)
T cd05052         217 LLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAF  259 (263)
T ss_pred             HHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence            2222 1    112234444455556678889999999987664

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=9.9e-30  Score=236.96  Aligned_cols=176  Identities=27%  Similarity=0.359  Sum_probs=146.7

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||+|+||.||+|.++.+|+.||+|.+....... ......+..|+++++.+ +||||+++++++.....+|+||||++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            699999999999999999999999986543221 12234556799999999 6999999999999999999999999999


Q ss_pred             ChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC------
Q 042392          113 DLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       113 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|.+++...+  .+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++.......      
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~  155 (277)
T cd05607          79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRA  155 (277)
T ss_pred             CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccC
Confidence            9998886543  48888999999999999999999999999999999999   678899999999988664321      


Q ss_pred             -CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 -GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 -~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                       .....+||.+.+. .++.++|+||+|++++
T Consensus       156 ~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~  185 (277)
T cd05607         156 GTNGYMAPEILKEE-PYSYPVDWFAMGCSIY  185 (277)
T ss_pred             CCCCccCHHHHccC-CCCCchhHHHHHHHHH
Confidence             1123389988764 4889999999965543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=6.9e-30  Score=239.02  Aligned_cols=183  Identities=28%  Similarity=0.375  Sum_probs=153.9

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++.+ +||||+.+++.+...+.+|+|
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc-hHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEE
Confidence            4788899999999999999999999999999987543322 23345577899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||++|++|.+++...+  .+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++......
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCC
Confidence            99999999999886543  48999999999999999999999999999999999999   67789999999999765432


Q ss_pred             CC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG-------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..       ....+||.+.+ ..++.++|+||+|++++
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~  192 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLY  192 (285)
T ss_pred             ccccCCCCCccccChHHHcC-CCCCCccccHHHHHHHH
Confidence            21       12238888865 46888999999966543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=8e-30  Score=262.90  Aligned_cols=184  Identities=24%  Similarity=0.289  Sum_probs=153.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+..|
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~-e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~ly   78 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN-PLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVY   78 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccC-HHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEE
Confidence            368999999999999999999999999999999987543322 33456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          104 VVMELCQGGDLFDRIIAK-----------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +||||++||+|.+++...           ...+...+..++.||+.||.|||+.||+||||||+||++   +.++.++|+
T Consensus        79 LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLi  155 (932)
T PRK13184         79 YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVIL  155 (932)
T ss_pred             EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEE
Confidence            999999999999988642           124566788999999999999999999999999999999   778899999


Q ss_pred             ecCCccccccc--------------------------CCCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEE--------------------------GGEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~--------------------------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |||+|+.....                          +.....+||.+.+ ..++.++|+||+|+.+
T Consensus       156 DFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVIL  221 (932)
T PRK13184        156 DWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVIL  221 (932)
T ss_pred             ecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHH
Confidence            99999876210                          0111228888765 4678899999996554

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=1.5e-29  Score=242.16  Aligned_cols=247  Identities=19%  Similarity=0.225  Sum_probs=177.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      |+...++|++.+.||+|+||.||+|.+..     +++.||+|++.....   ......+.+|+.+++.+.+||||+++++
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~   78 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLG   78 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheee
Confidence            45566789999999999999999997543     457899999864432   2234567889999999966999999999


Q ss_pred             eeecC-CeEEEEEeccCCCChHHHHHHc----------------------------------------------------
Q 042392           95 AHEDE-TAVHVVMELCQGGDLFDRIIAK----------------------------------------------------  121 (436)
Q Consensus        95 ~~~~~-~~~~iv~e~~~~g~L~~~l~~~----------------------------------------------------  121 (436)
                      ++... ..+|++|||+++++|.+++...                                                    
T Consensus        79 ~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
T cd05054          79 ACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEE  158 (337)
T ss_pred             eEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhccc
Confidence            87644 5789999999999999998642                                                    


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-------
Q 042392          122 ---------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-------  185 (436)
Q Consensus       122 ---------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-------  185 (436)
                               .++++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++..+.....       
T Consensus       159 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~  235 (337)
T cd05054         159 DEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDA  235 (337)
T ss_pred             chhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCC
Confidence                     247888899999999999999999999999999999999   6678999999999987532211       


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCC
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSM  256 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~  256 (436)
                         ....+||.+.+ ..++.++|+||+|+.+ .+.++ ..             .+..+....+.+...+..     ....
T Consensus       236 ~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l-~el~t~g~-------------~p~~~~~~~~~~~~~~~~~~~~~~~~~  300 (337)
T cd05054         236 RLPLKWMAPESIFD-KVYTTQSDVWSFGVLL-WEIFSLGA-------------SPYPGVQIDEEFCRRLKEGTRMRAPEY  300 (337)
T ss_pred             CCCccccCcHHhcC-CCCCccccHHHHHHHH-HHHHHcCC-------------CCCCCCCccHHHHHHHhccCCCCCCcc
Confidence               12338888876 4688899999995544 33221 00             000111111122222211     0112


Q ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       257 ~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+.+-.+.+.+.+..+++.|.++.|.+..+.
T Consensus       301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~  331 (337)
T cd05054         301 ATPEIYSIMLDCWHNNPEDRPTFSELVEILG  331 (337)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            2333344455666778889999999887654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=3.2e-29  Score=230.16  Aligned_cols=176  Identities=22%  Similarity=0.334  Sum_probs=147.7

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|++..+++.||+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|+||||++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP---PDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQ   76 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeecc
Confidence            469999999999999999999999998764321   23446788999999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC---
Q 042392          111 GGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE---  186 (436)
Q Consensus       111 ~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~---  186 (436)
                      +++|.+++...+ .+++..++.++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||++.........   
T Consensus        77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~  153 (252)
T cd05084          77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTG  153 (252)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccC
Confidence            999999997654 58999999999999999999999999999999999999   67788999999998764432110   


Q ss_pred             -------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          187 -------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       187 -------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                             ...+||.+.+ ..++.++|+||+|+.++
T Consensus       154 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~  187 (252)
T cd05084         154 GMKQIPVKWTAPEALNY-GRYSSESDVWSFGILLW  187 (252)
T ss_pred             CCCCCceeecCchhhcC-CCCChHHHHHHHHHHHH
Confidence                   1237887755 45788999999955543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=3.7e-30  Score=237.25  Aligned_cols=182  Identities=31%  Similarity=0.488  Sum_probs=155.4

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |++++.||+|+||+||+|++..+++.||+|++.......  .......+|+.+++.+ +||||+++++++......++||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE--EEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH--HHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc--cccchhhhhhhccccc-cccccccccccccccccccccc
Confidence            889999999999999999999999999999998765432  2223345699999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC--
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG--  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--  184 (436)
                      ||+++++|.+++...+.+++..+..++.|++.||.+||+.+|+||||||+||++   +.++.++|+|||.+.......  
T Consensus        78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence            999999999999977889999999999999999999999999999999999999   778899999999997531111  


Q ss_pred             ------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 ------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                            .....+||.+.....++.++|+||+|..++
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  190 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY  190 (260)
T ss_dssp             BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc
Confidence                  111228888763467889999999966553

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=4.2e-29  Score=233.53  Aligned_cols=252  Identities=22%  Similarity=0.255  Sum_probs=180.4

Q ss_pred             cceeeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--
Q 042392           25 LHYSFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--   98 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--   98 (436)
                      .+|++.+.||+|+||.||+|.    +..++..||+|.+....    ......+.+|+++++.+ +||||+++++++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCC
Confidence            479999999999999999997    34578899999986543    23345688999999999 69999999997654  


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ...+|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~  155 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLT  155 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCccc
Confidence            34689999999999999999764 458999999999999999999999999999999999999   67889999999999


Q ss_pred             ccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhh--HHHHHHHhhhhCCCCCCccCHH
Q 042392          178 LLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEE--TQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       178 ~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~--~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      .........           ...+||.+.+ ..++.++|+|++|+++ .+.++...  ...........+....+.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l-~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05081         156 KVLPQDKEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVL-YELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY  233 (284)
T ss_pred             ccccCCCcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHH-HHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence            876432210           1237887765 4678899999996554 34332100  0000111122233333333334


Q ss_pred             HHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+...+..-.     ...+.+-.+.+.+++..+++.|.+..|.+..+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l  280 (284)
T cd05081         234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV  280 (284)
T ss_pred             HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            4444333321     12233334445556677888889888887654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1e-29  Score=245.39  Aligned_cols=173  Identities=17%  Similarity=0.270  Sum_probs=146.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|++..+++.||+|+....          ....|+.+++.+ +||||+++++++......|+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEE
Confidence            4699999999999999999999999999999975332          234689999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||++. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+++.....
T Consensus       135 v~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        135 VLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccC
Confidence            999996 4898888764 568999999999999999999999999999999999999   77889999999999754321


Q ss_pred             C-------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 G-------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .       .....+||.+.+ ..|+.++|+||+|+++
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl  246 (357)
T PHA03209        211 PAFLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVL  246 (357)
T ss_pred             cccccccccccccCCeecCC-CCCCchhhHHHHHHHH
Confidence            1       112238888876 4688999999996554

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=5.6e-29  Score=234.14  Aligned_cols=183  Identities=21%  Similarity=0.263  Sum_probs=153.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCC----------------ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTN----------------MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP   87 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~   87 (436)
                      ..+|++.+.||+|+||.||+|.+..++                ..||+|.+.....   ......+.+|+++++.+ +||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l-~~~   79 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS---DNAREDFLKEVKILSRL-SDP   79 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhc-CCC
Confidence            468999999999999999999876543                5689998875532   23456788999999999 699


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-----------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ||+++++++.....+++||||+++++|.+++....           .+++..++.++.|++.||.|||+.+|+||||||+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence            99999999999999999999999999999998765           6899999999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||++   +.++.++|+|||++........          ....+||.+.+ ..++.++|+||+|++++
T Consensus       160 Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~  223 (296)
T cd05051         160 NCLV---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLW  223 (296)
T ss_pred             ceee---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHH
Confidence            9999   6778999999999986533211          11237887765 46889999999966554

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=2.9e-29  Score=232.41  Aligned_cols=243  Identities=21%  Similarity=0.277  Sum_probs=179.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+....... ......+.+|+.+++.+ +||||+++++++...+..++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD-AKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh-HHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEE
Confidence            57899999999999999999999999999999886543322 33445788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          105 VMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|||+++++|.+++..    ...+++..++.++.||+.||.|||++|++|+||||+||++   +.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcc
Confidence            9999999999998874    2458999999999999999999999999999999999999   67789999999998766


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .....        ....+||.+.+ ..++.++|+||+|++++.-..+...       |      .....+..++...+..
T Consensus       157 ~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p-------~------~~~~~~~~~~~~~~~~  222 (267)
T cd08229         157 SSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSP-------F------YGDKMNLYSLCKKIEQ  222 (267)
T ss_pred             ccCCcccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCC-------c------ccccchHHHHhhhhhc
Confidence            43221        11227887754 4577889999996554332211110       1      0011112222222222


Q ss_pred             cCCC-----CCHHHHHHHHH-HHcCCCCCcccHHHHHHHH
Q 042392          253 VGSM-----LTEFDVKQLME-AADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       253 ~~~~-----~s~~~i~~l~~-~~d~d~~g~i~~~EF~~~~  286 (436)
                      ...+     ....++..++. +...+.+.|+++++....+
T Consensus       223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~  262 (267)
T cd08229         223 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVA  262 (267)
T ss_pred             CCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHH
Confidence            1111     11234444444 5667889999999877654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=4.2e-29  Score=234.32  Aligned_cols=184  Identities=27%  Similarity=0.412  Sum_probs=158.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+++++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   78 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK-LKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYL   78 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEE
Confidence            47999999999999999999999999999999987543222 23456688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|.||++   +.++.+||+|||++.......
T Consensus        79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~  155 (290)
T cd05580          79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRT  155 (290)
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCCC
Confidence            99999999999999988889999999999999999999999999999999999999   678899999999998765442


Q ss_pred             CC-----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 GE-----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..     ...+||.+.+ ..++.++|+||+|+++.
T Consensus       156 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~  189 (290)
T cd05580         156 YTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIY  189 (290)
T ss_pred             CCCCCCccccChhhhcC-CCCCccccHHHHHHHHH
Confidence            21     1237887765 35678899999965543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=5.9e-29  Score=235.32  Aligned_cols=249  Identities=16%  Similarity=0.196  Sum_probs=181.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECC-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENS-------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      .++...++|.+.+.||+|+||.||+|++..       +...+|+|.+.....   ......+.+|+.+++.+.+||||++
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~   88 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIIN   88 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC---hHHHHHHHHHHHHHHHhcCCCCEee
Confidence            345566789999999999999999998643       235699998865421   2234568889999999966999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCC
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKP  155 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp  155 (436)
                      +++++...+.+|+||||+++|+|.+++....                .++...+..++.|++.||.|||++|++||||||
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp  168 (307)
T cd05098          89 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAA  168 (307)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence            9999999999999999999999999998642                377888999999999999999999999999999


Q ss_pred             CcceeeccCCCCcEEEEecCCcccccccC-------C---CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHH
Q 042392          156 ENFCFISRDDNALLKVTDFGSALLFEEEG-------G---EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQA  225 (436)
Q Consensus       156 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------~---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~  225 (436)
                      +||++   +.++.+||+|||++.......       .   ....+||.+.+ ..++.++|+||+|++++ +.+..     
T Consensus       169 ~Nill---~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~-el~~~-----  238 (307)
T cd05098         169 RNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLW-EIFTL-----  238 (307)
T ss_pred             HheEE---cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHH-HHHcC-----
Confidence            99999   677899999999997653211       1   12337887765 45788999999965543 32210     


Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                              ...+-.....+++...+..-.     ...+.+-.+.+.+.+..+.+.|+++.|++..+..
T Consensus       239 --------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         239 --------GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             --------CCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence                    000001122333333332211     1122333344555667788999999999877644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1e-30  Score=250.09  Aligned_cols=191  Identities=18%  Similarity=0.282  Sum_probs=165.8

Q ss_pred             cccce-eeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           23 VMLHY-SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        23 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ..++| +...+||+|+|-+||+|.|..+|..||.-.++.....+.+.....+..|+++|+.| +|||||++|++|.+...
T Consensus        37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n  115 (632)
T KOG0584|consen   37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDN  115 (632)
T ss_pred             CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCC
Confidence            44556 55789999999999999999999999988777666655566778899999999999 69999999999987655


Q ss_pred             --EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          102 --VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       102 --~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                        +.+|+|++..|+|..|+++.+.++...++.|++||+.||.|||++.  |+|||||..||+++  +..|.|||+|+|+|
T Consensus       116 ~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  116 KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLA  193 (632)
T ss_pred             ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHH
Confidence              8899999999999999999999999999999999999999999875  99999999999996  56789999999999


Q ss_pred             ccccccCCCC------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          178 LLFEEEGGEA------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       178 ~~~~~~~~~~------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ..+.......      ..|||++-  ..|...+|||++|+|++-...
T Consensus       194 tl~r~s~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT  238 (632)
T KOG0584|consen  194 TLLRKSHAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVT  238 (632)
T ss_pred             HHhhccccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHh
Confidence            9887654332      12899887  589999999999888865443

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.9e-29  Score=245.24  Aligned_cols=180  Identities=21%  Similarity=0.324  Sum_probs=151.2

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ...+..+|.+++.||+|+||.||+|...  .+++.||+|.+....         ...+|+.+++.+ +||||+++++++.
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~---------~~~~E~~il~~l-~h~~iv~~~~~~~  156 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK---------TPGREIDILKTI-SHRAIINLIHAYR  156 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc---------cHHHHHHHHHhc-CCCCccceeeeEe
Confidence            3445668999999999999999999764  456889999875431         245899999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ....+|+|||++. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.++|+|||+|
T Consensus       157 ~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a  232 (392)
T PHA03207        157 WKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAA  232 (392)
T ss_pred             eCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccc
Confidence            9999999999996 5999999777789999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          178 LLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       178 ~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........          ....+||.+.+ ..|+.++|+||+|++++
T Consensus       233 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~  278 (392)
T PHA03207        233 CKLDAHPDTPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLF  278 (392)
T ss_pred             cccCcccccccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHH
Confidence            76543221          11228888765 46888999999955543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=4.6e-29  Score=233.13  Aligned_cols=241  Identities=18%  Similarity=0.184  Sum_probs=179.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTN-----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+|++.+.||+|+||.||+|.+...+     ..||+|.+.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~---~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~   79 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE---PKVQQEFRQEAELMSDL-QHPNIVCLLGVCTK   79 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC---HHHHHHHHHHHHHHHhc-CCcccceEEEEEcC
Confidence            457999999999999999999976554     6899998864432   23445688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS  162 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~  162 (436)
                      ....|++|||+++++|.+++...                ..+++..+..++.|++.||.|||+.+++||||||+||++  
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~--  157 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV--  157 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE--
Confidence            99999999999999999999864                347788999999999999999999999999999999999  


Q ss_pred             cCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          163 RDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       163 ~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                       +.++.++|+|||++........          ....|||.+.+ ..++.++|+||+|+. +.+.++.            
T Consensus       158 -~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~i-l~el~~~------------  222 (283)
T cd05048         158 -GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVV-LWEIFSY------------  222 (283)
T ss_pred             -cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHH-HHHHHcC------------
Confidence             6778999999999976533211          11238887765 467889999999544 4343320            


Q ss_pred             hCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          233 MDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                       +..+-.-.+..++...+..-     ....+.+-.+.+.++.+.|.+.|.++.|.+..+
T Consensus       223 -g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l  280 (283)
T cd05048         223 -GLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL  280 (283)
T ss_pred             -CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence             00010012223343333221     112233334445556678899999999988765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.97  E-value=2.5e-29  Score=238.87  Aligned_cols=180  Identities=23%  Similarity=0.377  Sum_probs=143.2

Q ss_pred             eeeecccCCeEEEEEEECC--CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CCeEEEE
Q 042392           30 GRMLGRGRFGVTYLCTENS--TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ETAVHVV  105 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~iv  105 (436)
                      ...||+|+||.||+|++..  ++..||+|.+.....      ...+.+|+.+++.+ +||||+++++++..  ...+|+|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI------SMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLL   78 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC------cHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEE
Confidence            4679999999999999653  568999998865422      23567899999999 69999999998853  5678999


Q ss_pred             EeccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-CCCCcEEEEecC
Q 042392          106 MELCQGGDLFDRIIAK---------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-DDNALLKVTDFG  175 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-~~~~~~kl~DFG  175 (436)
                      |||+.+ +|.+++...         ..+++..++.++.||+.||.|||+.+|+||||||+||++... +..+.+||+|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            999975 888887532         237889999999999999999999999999999999998532 345789999999


Q ss_pred             CcccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          176 SALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       176 ~a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      +|+.......           ....+||.+.+...++.++|+||+|++ +.+.+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i-l~el~  210 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-FAELL  210 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHH-HHHHH
Confidence            9987643221           112389998876678899999999554 44433

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=7.2e-29  Score=234.76  Aligned_cols=182  Identities=20%  Similarity=0.249  Sum_probs=155.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+.....   ......+.+|+++++.+ +||||+++++++...+.+|+
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK---PAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEE
Confidence            369999999999999999999999999999998865422   23445688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++++|.+++.+.+++++..+..++.|++.||.|||+ .+++||||||+||++   +.++.++|+|||++......
T Consensus        77 v~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~  153 (308)
T cd06615          77 CMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS  153 (308)
T ss_pred             EeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccc
Confidence            99999999999999888889999999999999999999997 699999999999999   67789999999998765432


Q ss_pred             CC------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..      ....+||.+.+ ..++.++|+|++|++++
T Consensus       154 ~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~  189 (308)
T cd06615         154 MANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLV  189 (308)
T ss_pred             ccccCCCCcCccChhHhcC-CCCCccchHHHHHHHHH
Confidence            11      12238888765 45788999999965543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=5.1e-29  Score=234.11  Aligned_cols=248  Identities=16%  Similarity=0.189  Sum_probs=182.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .++.-..+|++.+.||+|+||.||+|.+...     ...+|+|.+.....   ......+.+|+.+++.+.+||||++++
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~   82 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLL   82 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            3455667899999999999999999997643     37899998865432   233456889999999995699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                      +++...+.+|++|||+++|+|..++...                ..+++..+..++.|++.||.|||+.+|+||||||+|
T Consensus        83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N  162 (293)
T cd05053          83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN  162 (293)
T ss_pred             EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence            9999999999999999999999999653                347888999999999999999999999999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHH
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALK  227 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~  227 (436)
                      |++   +.++.+||+|||+++.+.....          ....+||.+.+ ..++.++|+||+|+.+ .+.++.       
T Consensus       163 il~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~el~~~-------  230 (293)
T cd05053         163 VLV---TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLL-WEIFTL-------  230 (293)
T ss_pred             EEE---cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHH-HHHhcC-------
Confidence            999   6788999999999986543211          11237887654 4678899999995444 332210       


Q ss_pred             HHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          228 EKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       228 ~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                            ...+-......++...+..     .....+..-.+.+.++++.|++.|++..|++..+.
T Consensus       231 ------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~  289 (293)
T cd05053         231 ------GGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD  289 (293)
T ss_pred             ------CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence                  0001111222233332222     11122334445566677888899999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.1e-31  Score=252.42  Aligned_cols=209  Identities=22%  Similarity=0.296  Sum_probs=171.5

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      +..+.|.|+..||.|+||.||+|.++.++...|.|++....    ......+.-||.||..| +||+||++++.|...+.
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks----eEELEDylVEIeILa~C-dHP~ivkLl~ayy~enk  103 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS----EEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENK  103 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc----hhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCc
Confidence            45567899999999999999999999999999999986543    45677889999999999 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +||..|||.||-...++..-+ .+.+.++..+++|+|.||.|||+++|||||||..|||+   +.+|.++|+|||.+...
T Consensus       104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn  180 (1187)
T KOG0579|consen  104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKN  180 (1187)
T ss_pred             eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccc
Confidence            999999999999888877754 59999999999999999999999999999999999999   78899999999998765


Q ss_pred             cccC--------CCCCCChHHHHHH----HHHHHhhhhhhHHHHHHHhcC---ChhhHHHHHHHhhhhCCCCC
Q 042392          181 EEEG--------GEASDDTSVILRM----KQFRRMSKLKKLTVKVIVEYL---PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       181 ~~~~--------~~~~~~pe~~~~~----~~~~~~~d~~s~~~~~~~~~l---~~e~~~~l~~~F~~~D~~~~  238 (436)
                      ....        .....|||++...    .+|.+.+||||+|++++-..-   +-.++..++-+...--..+.
T Consensus       181 ~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePP  253 (1187)
T KOG0579|consen  181 KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP  253 (1187)
T ss_pred             hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCC
Confidence            4321        1122288887632    479999999999988865432   44456666665544333333

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=9.3e-31  Score=220.95  Aligned_cols=214  Identities=24%  Similarity=0.336  Sum_probs=171.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--C
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--T  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~  100 (436)
                      -.++|++.+.+|+|.|+.||.|.+..++++++||+++..       ..+.+.||+.||..|++||||++++++..++  .
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk  108 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK  108 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence            457899999999999999999999999999999998643       3457999999999999999999999999765  4


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ...+|+||+.+.+...+-   ..++.-.++.++.+++.||.|||+.||+|||+||.|+++..  ....++|+|+|+|...
T Consensus       109 tpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  109 TPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFY  183 (338)
T ss_pred             CchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hhceeeeeecchHhhc
Confidence            578999999887766554   34788899999999999999999999999999999999953  4567999999999887


Q ss_pred             cccCC----CCCC---ChHHHHHHHHHHHhhhhhhHHHHHHHhcC--------ChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          181 EEEGG----EASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYL--------PGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       181 ~~~~~----~~~~---~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--------~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      .+...    .++.   .||.+...+.|...-|+||+ +|+++.++        +.+..+++-++-..        +..+|
T Consensus       184 Hp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~-GcmlA~miFrkepFFhG~dN~DQLVkIakV--------LGt~e  254 (338)
T KOG0668|consen  184 HPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL-GCMLASMIFRKEPFFHGHDNYDQLVKIAKV--------LGTDE  254 (338)
T ss_pred             CCCceeeeeeehhhcCCchheeechhccccHHHHHH-HHHHHHHHhccCcccCCCCCHHHHHHHHHH--------hChHH
Confidence            65322    1111   89999999999999999999 67766654        33344455554443        44566


Q ss_pred             HHHHHHhcCCCC
Q 042392          246 LRAGLTKVGSML  257 (436)
Q Consensus       246 L~~~l~~~~~~~  257 (436)
                      |...+.+....+
T Consensus       255 l~~Yl~KY~i~L  266 (338)
T KOG0668|consen  255 LYAYLNKYQIDL  266 (338)
T ss_pred             HHHHHHHHccCC
Confidence            777777655443

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=3e-29  Score=234.41  Aligned_cols=253  Identities=22%  Similarity=0.249  Sum_probs=175.0

Q ss_pred             ccce-eeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHY-SFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .++| ++.+.||+|+||+||++.    ...++..||+|++.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   77 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTL-YHENIVKYKGCCSE   77 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            3456 999999999999998865    335688999999865432   22345678999999999 69999999998765


Q ss_pred             C--CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 E--TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .  ..+|+||||+++++|.+++... .+++..++.++.|++.||.|||+++|+||||||+||++   +.++.++|+|||+
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~  153 (283)
T cd05080          78 QGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGL  153 (283)
T ss_pred             CCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeeccc
Confidence            3  4689999999999999998764 59999999999999999999999999999999999999   6778999999999


Q ss_pred             cccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          177 ALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       177 a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      +........           ....+||.+.+ ..++.++|+||+|+.++ +.+ +..........|..+-....+.....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~-el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd05080         154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLY-ELLTHCDSKQSPPKKFEEMIGPKQGQMTVV  231 (283)
T ss_pred             ccccCCcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHH-HHHhCCCCCCCCcchhhhhhcccccccchh
Confidence            987643211           01127887754 45788999999955543 333 11110000011111111122222222


Q ss_pred             HHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+...+...     ....+.+-.+.+.+++..+++.|+++.+.+..+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l  278 (283)
T cd05080         232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL  278 (283)
T ss_pred             hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence            222222111     112233334445556677888899998887654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=5.9e-29  Score=234.25  Aligned_cols=183  Identities=22%  Similarity=0.349  Sum_probs=155.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +|++.+.||+|+||.||+|.+..+++.||||.+....... .......+.+|+.+++.+ +||||+++++++...+..|+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEE
Confidence            5889999999999999999999999999999997654331 122345577899999999 59999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++   +.++.++|+|||++......
T Consensus        80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~  155 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSP  155 (298)
T ss_pred             EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCC
Confidence            99999 889999998766 79999999999999999999999999999999999999   67889999999999876543


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ...+||.+.+...++.++|+|++|+.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  193 (298)
T cd07841         156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIF  193 (298)
T ss_pred             CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            221        123899887666778899999995443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=7.5e-29  Score=233.45  Aligned_cols=241  Identities=15%  Similarity=0.147  Sum_probs=174.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCc--eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNM--PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ++|++.+.||+|+||.||+|....++.  .+|+|.++....   ......+.+|+.+++++.+||||+++++++...+.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~   78 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS---ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL   78 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC---HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence            579999999999999999999877664  468887753221   223456789999999996699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392          103 HVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      |+||||+++++|.+++.+..                .+++..++.++.|++.||.|||++||+||||||+|||+   +.+
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~  155 (297)
T cd05089          79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GEN  155 (297)
T ss_pred             eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCC
Confidence            99999999999999997642                37888999999999999999999999999999999999   678


Q ss_pred             CcEEEEecCCcccccccC----C---CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCC
Q 042392          167 ALLKVTDFGSALLFEEEG----G---EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~----~---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      +.+||+|||++.......    .   ....+||.+.+ ..++.++|+||+|+.+. +.++.             +..+-.
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~-el~t~-------------g~~pf~  220 (297)
T cd05089         156 LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLW-EIVSL-------------GGTPYC  220 (297)
T ss_pred             CeEEECCcCCCccccceeccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHH-HHHcC-------------CCCCCC
Confidence            899999999986432110    1   11337887765 46788999999955443 33210             000000


Q ss_pred             ccCHHHHHHH-HHhc----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          240 TLSYDELRAG-LTKV----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       240 ~i~~~eL~~~-l~~~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+..++... ....    ....+.+-.+.+.+++..+++.|+++.+.+..+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l  272 (297)
T cd05089         221 GMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL  272 (297)
T ss_pred             CCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            1112222221 1111    112344444555566778888999999987554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.97  E-value=2.7e-29  Score=235.00  Aligned_cols=183  Identities=22%  Similarity=0.330  Sum_probs=155.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.......  .....+.+|+.+++.+ +||||+++++++......|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   77 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK--MVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYL   77 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc--hhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEE
Confidence            47999999999999999999999899999999886543321  3345678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|..+......+++..+..++.||+.||.|||+.+++||||+|+||++   +.++.++|+|||++.......
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          78 VFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             EEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCc
Confidence            99999998888777666669999999999999999999999999999999999999   778899999999988764432


Q ss_pred             CC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 GE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..        ...+||.+.+...++.++|+||+|+++
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l  191 (286)
T cd07846         155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLV  191 (286)
T ss_pred             cccCcccceeeccCcHHhccccccCchHhHHHHHHHH
Confidence            21        123899887656677889999995554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=8.6e-29  Score=230.53  Aligned_cols=244  Identities=16%  Similarity=0.141  Sum_probs=178.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      +...++|++.+.||+|+||.||+|.+...     +..||+|.+.....   ......+.+|+.+++.+ +||||++++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~~-~~~~i~~~~~~   77 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS---MRERIEFLNEASVMKEF-NCHHVVRLLGV   77 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC---HHHHHHHHHHHHHHHhC-CCCceeEEEEE
Confidence            45567899999999999999999998643     47899999864432   22345678999999999 69999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAKG----------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD  165 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~  165 (436)
                      +......|+||||+++|+|.+++....          .+++..+..++.|++.||.|||+.+++||||||+||++   +.
T Consensus        78 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~  154 (277)
T cd05032          78 VSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AE  154 (277)
T ss_pred             EcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cC
Confidence            999999999999999999999997532          25778899999999999999999999999999999999   77


Q ss_pred             CCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCC
Q 042392          166 NALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDT  235 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~  235 (436)
                      ++.+||+|||+++.......          ....+||.+.+ ..++.++|+|++|+.+ .+.++.             ..
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~el~t~-------------g~  219 (277)
T cd05032         155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVL-WEMATL-------------AE  219 (277)
T ss_pred             CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHH-HHhhcc-------------CC
Confidence            88999999999876543211          11237887764 4578899999995544 333310             00


Q ss_pred             CCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          236 DKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       236 ~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+-...+..++...+..-     ....+.+-.+.+-+++..+.+.|+++.+.+..+
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l  275 (277)
T cd05032         220 QPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL  275 (277)
T ss_pred             CCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence            000011222333322211     112233333444455677888899999887654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=1e-28  Score=231.45  Aligned_cols=246  Identities=17%  Similarity=0.161  Sum_probs=176.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      |+...++|++.+.||+|+||.||+|.++.     .+..||+|.+......   .....+.+|+.+++.+ +||||+++++
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~   76 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL---RERIEFLNEASVMKGF-TCHHVVRLLG   76 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH---HHHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence            45567899999999999999999997642     3558999987644321   2334578899999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG----------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      ++......|+||||+++|+|.+++....          ..+...+..++.|++.||.|||+++|+||||||+||++   +
T Consensus        77 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~  153 (288)
T cd05061          77 VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---A  153 (288)
T ss_pred             EEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---c
Confidence            9999999999999999999999997632          24567788999999999999999999999999999999   6


Q ss_pred             CCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC
Q 042392          165 DNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD  234 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D  234 (436)
                      .++.++|+|||+++.......          ....+||.+.+ ..++.++|+||+|++++ +.++.             .
T Consensus       154 ~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~-el~~~-------------~  218 (288)
T cd05061         154 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLW-EITSL-------------A  218 (288)
T ss_pred             CCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHH-HHHhC-------------C
Confidence            788999999999885432111          11237887765 46788999999965543 22210             0


Q ss_pred             CCCCCccCHHHHHHHHHhcC-----CCCCHHHHHH-HHHHHcCCCCCcccHHHHHHHHHh
Q 042392          235 TDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQ-LMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~~~-----~~~s~~~i~~-l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+-...+.+++...+..-+     ...+ ..+.. +-.++..+.+.|+++.+.+..+..
T Consensus       219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  277 (288)
T cd05061         219 EQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKD  277 (288)
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            01111133334433322211     1112 33444 344566778888888888765543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=2.6e-29  Score=231.17  Aligned_cols=236  Identities=22%  Similarity=0.311  Sum_probs=176.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|+||.||++.+..+++.||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   76 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIV   76 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEE
Confidence            58999999999999999999999999999999865432   23345678899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||++||+|+||||+||++   +.++.++|+|||.+......
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeeccc
Confidence            9999999999988753  348899999999999999999999999999999999999   67889999999999866442


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh---
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK---  252 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~---  252 (436)
                      ..        ....+||.+.+ ..++.++|+||+|+.+ .+.+....      .   ++     ..+...+...+..   
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~-~~l~~g~~------p---~~-----~~~~~~~~~~~~~~~~  217 (255)
T cd08219         154 GAYACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCIL-YELCTLKH------P---FQ-----ANSWKNLILKVCQGSY  217 (255)
T ss_pred             ccccccccCCccccCHHHHcc-CCcCchhhhhhhchhh-eehhhccC------C---CC-----CCCHHHHHHHHhcCCC
Confidence            21        11237888765 4578899999995544 33331110      0   00     1111222111111   


Q ss_pred             --cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          253 --VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       253 --~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                        .....+....+.+.+++..|++.|+++.|.+.
T Consensus       218 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         218 KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence              11122333334455567788889999888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=8.6e-29  Score=229.35  Aligned_cols=239  Identities=19%  Similarity=0.265  Sum_probs=176.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+|++.+.||+|+||.||+|.+..++.   .+|+|.+.....   ......+.+|+.+++.+ +||||+++++++...+.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---EKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKP   79 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCc
Confidence            579999999999999999999865543   799998865432   23345788999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+||||+++++|.+++... +.++...+..++.|++.|+.|||+.+++||||||+||++   +.++.++|+|||++..+
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~  156 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCccccc
Confidence            99999999999999999875 458999999999999999999999999999999999999   67889999999999876


Q ss_pred             cccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          181 EEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       181 ~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .....           ....+||.+.+ ..++.++|+|++|+.++ +.+. ..              .+-...+..++..
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~-ell~~g~--------------~p~~~~~~~~~~~  220 (267)
T cd05066         157 EDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMW-EVMSYGE--------------RPYWEMSNQDVIK  220 (267)
T ss_pred             ccccceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHH-HHhcCCC--------------CCcccCCHHHHHH
Confidence            43221           01237887765 46788999999955443 3221 00              0000011122222


Q ss_pred             HHHhc-C----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTKV-G----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~~-~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+... .    ...+..-.+.+.+.+..+.+++.++.+.+..+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l  263 (267)
T cd05066         221 AIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL  263 (267)
T ss_pred             HHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHH
Confidence            22211 1    11122334445556677888899988887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=4.6e-29  Score=232.73  Aligned_cols=241  Identities=17%  Similarity=0.167  Sum_probs=179.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+|.+.+.||+|+||.||+|.+.     .+++.||+|.+.....   ......+.+|+++++.+ +||||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   79 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNF-QHENIVKFYGVCTE   79 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhc-CCCCchheeeEEec
Confidence            356899999999999999999874     3467899999865432   22456789999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG--------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      ....|+||||+++++|.+++...+              .+++..+..++.|++.|+.|||++|++||||||+||++   +
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~  156 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---G  156 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---c
Confidence            999999999999999999997643              36788999999999999999999999999999999999   7


Q ss_pred             CCCcEEEEecCCcccccccC------C----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC
Q 042392          165 DNALLKVTDFGSALLFEEEG------G----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD  234 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~------~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D  234 (436)
                      .++.++|+|||++.......      .    ....+||.+.+ ..++.++|+||+|+++ .+.++.             +
T Consensus       157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~e~~~~-------------g  221 (280)
T cd05049         157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVL-WEIFTY-------------G  221 (280)
T ss_pred             CCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHH-HHHHhc-------------C
Confidence            78999999999997643221      1    11238888765 4688899999995544 333310             0


Q ss_pred             CCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          235 TDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+-...+..++...+..-     ....+..-.+.+.+++..|++.|++..|.+..+
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l  278 (280)
T cd05049         222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL  278 (280)
T ss_pred             CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence            1110111222333332221     112233444555566778899999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=9.9e-29  Score=230.20  Aligned_cols=186  Identities=19%  Similarity=0.229  Sum_probs=151.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      |....++|++.+.||+|+||.||+|.+..     ++..||+|++.....   ......+.+|+.+++.+ +||||+++++
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l-~~~~iv~~~~   76 (277)
T cd05062           1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS---MRERIEFLNEASVMKEF-NCHHVVRLLG   76 (277)
T ss_pred             CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC---HHHHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence            34567789999999999999999998652     356799998754322   22344578999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG----------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      ++.....+++||||+++++|.+++.+..          .++...+..++.|++.||.|||+.+++||||||+||++   +
T Consensus        77 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~  153 (277)
T cd05062          77 VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---A  153 (277)
T ss_pred             EEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---c
Confidence            9999999999999999999999987632          24677888999999999999999999999999999999   6


Q ss_pred             CCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          165 DNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .++.++|+|||++........          ....+||.+.+ ..++..+|+||+|+++
T Consensus       154 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  211 (277)
T cd05062         154 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVL  211 (277)
T ss_pred             CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHH
Confidence            788999999999875432111          11238888765 5678899999996554

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=4.4e-29  Score=232.85  Aligned_cols=241  Identities=19%  Similarity=0.198  Sum_probs=176.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.++||+|+||.||+|.+..+++.||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+..++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   76 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT---VELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISI   76 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC---hHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEE
Confidence            368899999999999999999999999999999865432   23445688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|..+    ..+++..+..++.|++.||.|||+.||+|+||||+||++   +.++.++|+|||++.......
T Consensus        77 v~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~~  149 (279)
T cd06619          77 CTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNSI  149 (279)
T ss_pred             EEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceeccccc
Confidence            9999999988654    357899999999999999999999999999999999999   778899999999998654432


Q ss_pred             CC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----
Q 042392          185 GE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----  253 (436)
Q Consensus       185 ~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----  253 (436)
                      ..      ...+||.+.+ ..++.++|+||+|+.+.....+...       |.... ...+.....++.......     
T Consensus       150 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~p-------f~~~~-~~~~~~~~~~~~~~~~~~~~~~~  220 (279)
T cd06619         150 AKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFP-------YPQIQ-KNQGSLMPLQLLQCIVDEDPPVL  220 (279)
T ss_pred             ccCCCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCC-------chhhc-ccccccchHHHHHHHhccCCCCC
Confidence            21      1227887765 4578899999996554322222111       11111 111112222222222211     


Q ss_pred             -CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 -GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 -~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       ....+.+-.+.+.+.+..++..|.+..|.+..
T Consensus       221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence             11123333445556677788889988887754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=8.8e-29  Score=231.31  Aligned_cols=241  Identities=17%  Similarity=0.151  Sum_probs=176.2

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+|++.+.||+|+||.||+|.+.    .++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++...
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   79 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQE   79 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecC
Confidence            367999999999999999999853    4567899999864332   23345688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS  162 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~  162 (436)
                      ...|+||||+++++|.+++....                 .+++..+..++.|++.||.|||+++++||||||+||++  
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili--  157 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI--  157 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE--
Confidence            99999999999999999986432                 36788899999999999999999999999999999999  


Q ss_pred             cCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          163 RDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       163 ~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                       +.++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|+++ .+.++             
T Consensus       158 -~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il-~el~~-------------  221 (283)
T cd05090         158 -GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVL-WEIFS-------------  221 (283)
T ss_pred             -cCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHH-HHHHc-------------
Confidence             6778899999999986533211          11237887765 4578899999995544 33331             


Q ss_pred             hCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          233 MDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+-...+..++...+..-     ....+..-...+..++..|...|+++.+....+
T Consensus       222 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l  280 (283)
T cd05090         222 FGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL  280 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence            011111112223333333221     112233334445556677888999998876554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=9.3e-29  Score=232.08  Aligned_cols=183  Identities=22%  Similarity=0.265  Sum_probs=153.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|.+..+++.||||.+.......   ....+.+|+.+++.+ +||||+++++++......|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   79 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG---APFTAIREASLLKDL-KHANIVTLHDIIHTKKTLT   79 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC---CchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEE
Confidence            468999999999999999999999899999999987543221   223466899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++... ..+++..++.++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||+++....
T Consensus        80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~  155 (291)
T cd07844          80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSV  155 (291)
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCC
Confidence            99999985 999988764 458999999999999999999999999999999999999   7788999999999875432


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+.+...++.++|+||+|+.++
T Consensus       156 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~  195 (291)
T cd07844         156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY  195 (291)
T ss_pred             CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence            111        11238998876666888999999965543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=1.1e-28  Score=230.27  Aligned_cols=240  Identities=20%  Similarity=0.217  Sum_probs=175.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNM----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+|++.+.||+|+||.||+|++..++.    .||+|++.....   ......+.+|+.+++.+ +||||+++++++...
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~   81 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---PKANKEILDEAYVMAGV-GSPYVCRLLGICLTS   81 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---HHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC
Confidence            3579999999999999999999877776    489998865432   23456688999999999 699999999998754


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                       ..++++||+++|+|.+++... +.+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||+++
T Consensus        82 -~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~  157 (279)
T cd05109          82 -TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLAR  157 (279)
T ss_pred             -CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCcee
Confidence             578999999999999999774 468999999999999999999999999999999999999   667889999999998


Q ss_pred             cccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .......          ....+||.+.+ ..++.++|+||+|++++ +.+.             ++..+-......++..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~-el~t-------------~g~~p~~~~~~~~~~~  222 (279)
T cd05109         158 LLDIDETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVW-ELMT-------------FGAKPYDGIPAREIPD  222 (279)
T ss_pred             ecccccceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHH-HHHc-------------CCCCCCCCCCHHHHHH
Confidence            7643211          11237887765 46788999999965543 3221             0001111122233333


Q ss_pred             HHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+....     ...+..-.+.+.+++..|.+.|+++.|.+..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l  265 (279)
T cd05109         223 LLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEF  265 (279)
T ss_pred             HHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            333211     11223333445566778888999999887554

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=1.1e-28  Score=228.12  Aligned_cols=182  Identities=23%  Similarity=0.294  Sum_probs=149.2

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|++.+.||+|+||.||+|++..+ ..||+|.+.....     ....+.+|+++++.+ +||||+++++++.. .
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~   73 (262)
T cd05071           2 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-E   73 (262)
T ss_pred             CCChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-C
Confidence            34567899999999999999999998655 4699999875332     234678999999999 69999999998754 5


Q ss_pred             eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..|+||||+++|+|.+++.+.  ..+++..+..++.|++.||.|||+.+++||||||+||++   +.++.++|+|||.+.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~  150 (262)
T cd05071          74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLAR  150 (262)
T ss_pred             CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCcee
Confidence            689999999999999999763  347899999999999999999999999999999999999   677899999999998


Q ss_pred             cccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          179 LFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .+......         ...+||...+ ..++.++|+||+|++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~  194 (262)
T cd05071         151 LIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLT  194 (262)
T ss_pred             eccccccccccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHH
Confidence            66432211         1237887654 45788999999955543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=9.3e-29  Score=233.62  Aligned_cols=249  Identities=16%  Similarity=0.188  Sum_probs=181.0

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC-------CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN-------STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      +.....+|.+.+.||+|+||.||+|++.       .++..||+|.+.....   ......+.+|+.+++.+.+||||+++
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~   86 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINL   86 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc---hHHHHHHHHHHHHHHhhccCCCchhe
Confidence            4556778999999999999999999753       2345799998864321   23345688999999999669999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ++++.....+|+||||+++|+|.+++.+..                .++...+..++.||+.||.|||++||+||||||+
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~  166 (304)
T cd05101          87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR  166 (304)
T ss_pred             eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence            999999999999999999999999998642                3677788999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQAL  226 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l  226 (436)
                      ||++   +.++.+||+|||+++.......          ....+||.+.+ ..|+.++|+||+|+.++ +.+..      
T Consensus       167 Nili---~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~~------  235 (304)
T cd05101         167 NVLV---TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMW-EIFTL------  235 (304)
T ss_pred             eEEE---cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHH-HHHcC------
Confidence            9999   6778999999999987643211          11237887765 46788999999965543 22210      


Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                             ...+-...+..++...+..-     ....+.+-...+.+++..+++.|.++.|++..+...
T Consensus       236 -------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         236 -------GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             -------CCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence                   00000112334443333221     112223333444455667888999999998876443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.2e-28  Score=229.62  Aligned_cols=244  Identities=16%  Similarity=0.141  Sum_probs=177.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   80 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---EQDESDFLMEALIMSKF-NHQNIVRLIGVSFE   80 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcc
Confidence            3579999999999999999999977     778999998764332   23345688899999999 69999999999998


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG-------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      ....|+||||+++++|.+++...+       .+++..+..++.||+.|+.|||+.+++||||||+||++........+||
T Consensus        81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence            899999999999999999997753       4788999999999999999999999999999999999954333457999


Q ss_pred             EecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          172 TDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       172 ~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                      +|||+++.......          ....+||.+.+ ..++.++|+||+|+.+ .+.++..             ..+-...
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il-~el~~~g-------------~~pf~~~  225 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLL-WEIFSLG-------------YMPYPGR  225 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHH-HHHHcCC-------------CCCCCCC
Confidence            99999987632211          11237888765 4588999999995544 3322100             0000001


Q ss_pred             CHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          242 SYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       242 ~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +..++...+..     .....+.+-.+.+.+++..+.+.|++..+.+..+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l  275 (277)
T cd05036         226 TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI  275 (277)
T ss_pred             CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence            11222222211     1122333334444555667888999999887654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=1.4e-29  Score=233.27  Aligned_cols=183  Identities=27%  Similarity=0.388  Sum_probs=157.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|+||.||+|.+..++..||+|++.+..... ......+.+|+++++.+ +||||+++++++.....+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-KGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-hhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEE
Confidence            5899999999999999999999999999999997654322 23456788999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      +||+.|++|..++....++++..+..++.|++.||.|||.++++|+||+|+||++   +.++.++|+|||++........
T Consensus        79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCcc
Confidence            9999999999999887789999999999999999999999999999999999999   7788999999999987654321


Q ss_pred             C-------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 E-------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .       ...+||.+.+ ..++.++|+|++|+++.
T Consensus       156 ~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  190 (258)
T cd05578         156 TTSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAY  190 (258)
T ss_pred             ccccCCChhhcCHHHHcc-cCCCCcccchhhHHHHH
Confidence            1       1127887765 45788999999965543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=1.1e-28  Score=231.15  Aligned_cols=240  Identities=19%  Similarity=0.202  Sum_probs=176.3

Q ss_pred             cceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .+|.+.+.||+|+||.||+|.+.     .++..+|+|.+....    ......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNL-QHEHIVKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC----HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Confidence            47999999999999999999853     345679999886543    23345688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      ..+|+||||+++++|.+++...+             .+++..+..++.|++.||.|||++|++||||||+||++   +.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~  156 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN  156 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccC
Confidence            99999999999999999997653             38999999999999999999999999999999999999   678


Q ss_pred             CcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC
Q 042392          167 ALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD  236 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~  236 (436)
                      +.++|+|||++........          ....+||.+.+ ..++.++|+||+|+.+ .+.++.             +..
T Consensus       157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il-~~l~t~-------------g~~  221 (288)
T cd05093         157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVL-WEIFTY-------------GKQ  221 (288)
T ss_pred             CcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHH-HHHHhC-------------CCC
Confidence            8999999999986532211          12338887765 5678899999995544 333210             001


Q ss_pred             CCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          237 KNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +-......++...+..     .....+.+-.+.+.+++..|++.|+++.|....+.
T Consensus       222 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~  277 (288)
T cd05093         222 PWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ  277 (288)
T ss_pred             CCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence            1111122222222211     11123333344455566778888899888876543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.97  E-value=3.7e-29  Score=230.30  Aligned_cols=182  Identities=24%  Similarity=0.416  Sum_probs=151.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-CCeEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-ETAVHV  104 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~i  104 (436)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+......  ......+.+|+.+++.+ +|||++++++.+.. ...+|+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS--RRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC--HHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEE
Confidence            589999999999999999999999999999998654332  23345678899999999 69999999998764 456899


Q ss_pred             EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          105 VMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ||||+++++|.+++...  ..+++..+..++.|++.|+.+||+.|++||||||+||++   +.++.++|+|||++.....
T Consensus        78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEecc
Confidence            99999999999999763  348999999999999999999999999999999999999   6788999999999987643


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+.+ ..++.++|+||+|++++
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~  193 (257)
T cd08223         155 QCDMASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVY  193 (257)
T ss_pred             cCCccccccCCcCccChhHhcC-CCCCchhhhHHHHHHHH
Confidence            221        11237887765 46778899999965543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=5.1e-29  Score=233.04  Aligned_cols=251  Identities=19%  Similarity=0.234  Sum_probs=177.9

Q ss_pred             ceeeeeeecccCCeEEEEEEE----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           26 HYSFGRMLGRGRFGVTYLCTE----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      .|++++.||+|+||.||+|+.    ..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++...  
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   80 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNL-YHENIVKYKGICTEDGG   80 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---HHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCC
Confidence            478999999999999999984    45788999999865432   23345688999999999 699999999998775  


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..+++||||++|++|.+++.+.. .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++.
T Consensus        81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~  157 (284)
T cd05079          81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTK  157 (284)
T ss_pred             CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCcccc
Confidence            56899999999999999997653 58999999999999999999999999999999999999   677899999999998


Q ss_pred             cccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChh--hHHHHHHHhhhhCCCCCCccCHHH
Q 042392          179 LFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGE--ETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       179 ~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e--~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      .+.....           ....+||.+.+ ..++.++|+||+|+++ .+.++..  ....+........ +..+......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il-~ellt~~~~~~~~~~~~~~~~~-~~~~~~~~~~  234 (284)
T cd05079         158 AIETDKEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTL-YELLTYCDSESSPMTLFLKMIG-PTHGQMTVTR  234 (284)
T ss_pred             ccccCccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhh-hhhhcCCCCCccccchhhhhcc-cccccccHHH
Confidence            6643221           11237887765 4578899999995544 4433210  0000111111111 1122233332


Q ss_pred             HHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          246 LRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       246 L~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+...     ....+..-.+.+-+++..+++.|+++.+.+..+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  280 (284)
T cd05079         235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGF  280 (284)
T ss_pred             HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence            32222221     112233444445556677888899998887665

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=1.1e-29  Score=237.69  Aligned_cols=182  Identities=27%  Similarity=0.378  Sum_probs=152.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|+..+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++.+ +||||+++.+++...+.+|+|
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-RKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-hhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEE
Confidence            4788899999999999999999999999999986543222 22345578899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++++|..++...+  .+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCC
Confidence            99999999998886543  58999999999999999999999999999999999999   67789999999999765322


Q ss_pred             C-------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 G-------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .       .....+||.+.+ ..++.++|+||+|+.+
T Consensus       156 ~~~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l  191 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLI  191 (285)
T ss_pred             CcccCCCCCcCccChHHhcC-CCCCcccchHHHHHHH
Confidence            1       112238888865 4688899999995544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=9.2e-29  Score=240.98  Aligned_cols=190  Identities=23%  Similarity=0.310  Sum_probs=154.0

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      ..++...++|.+.+.||+|+||.||+|++.     .+++.||+|++.....   ......+.+|+.+|..+..||||+++
T Consensus        30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~  106 (401)
T cd05107          30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNL  106 (401)
T ss_pred             CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEE
Confidence            356777788999999999999999999964     3456899999975432   22334688999999999449999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHcC--------------------------------------------------
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAKG--------------------------------------------------  122 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--------------------------------------------------  122 (436)
                      ++++...+.+|+|||||++|+|.+++...+                                                  
T Consensus       107 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (401)
T cd05107         107 LGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES  186 (401)
T ss_pred             EEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence            999999999999999999999999986531                                                  


Q ss_pred             ------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCC
Q 042392          123 ------------------------------------------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLK  154 (436)
Q Consensus       123 ------------------------------------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlk  154 (436)
                                                                      .++...+..++.|++.||.|||+.+|+|||||
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlk  266 (401)
T cd05107         187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLA  266 (401)
T ss_pred             cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCC
Confidence                                                            24566778899999999999999999999999


Q ss_pred             CCcceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          155 PENFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       155 p~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+|||+   +..+.+||+|||+++.......          ....+||.+.+ ..++.++|+|++|++++
T Consensus       267 p~NiLl---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~  332 (401)
T cd05107         267 ARNVLI---CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLW  332 (401)
T ss_pred             cceEEE---eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHH
Confidence            999999   6678999999999986532111          11237887765 45788899999966554

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=7.1e-29  Score=233.40  Aligned_cols=183  Identities=21%  Similarity=0.254  Sum_probs=149.9

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC--------------CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCe
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST--------------NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI   89 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni   89 (436)
                      ..+|++.+.||+|+||.||+|++..+              ...||+|.+.....   ......+.+|+++++.+ +||||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~ei~~l~~l-~h~~i   79 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT---KTARNDFLKEIKIMSRL-KNPNI   79 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC---HHHHHHHHHHHHHHHhC-CCCCc
Confidence            45899999999999999999987543              23589999865422   23445688999999999 69999


Q ss_pred             eeceeeeecCCeEEEEEeccCCCChHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKG------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        90 v~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                      +++++++.....+|+||||+++++|.+++....            .+++..+..++.|++.||.|||+.+++||||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            999999999999999999999999999986532            36788899999999999999999999999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |++   +.++.+||+|||++........          ....+||.+.+ ..++.++|+||+|+.++
T Consensus       160 ill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~  222 (295)
T cd05097         160 CLV---GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLW  222 (295)
T ss_pred             EEE---cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHH
Confidence            999   6778899999999976533211          11237887765 45789999999965543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=9.4e-29  Score=227.62  Aligned_cols=237  Identities=19%  Similarity=0.244  Sum_probs=173.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|.+......     ...+.+|+.+++.+ +||||+++++++...+..|+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~-----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS-----EDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC-----HHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEE
Confidence            35889999999999999999885 5678999998654322     24577899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++++|.+++... +.+++..+..++.|++.|+.|||+.|++||||||+||++   +.++.+||+|||+++.....
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~  153 (256)
T cd05059          77 VTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDD  153 (256)
T ss_pred             EEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceecccc
Confidence            99999999999999764 468999999999999999999999999999999999999   67889999999999765432


Q ss_pred             CC-----C----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-c
Q 042392          184 GG-----E----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-V  253 (436)
Q Consensus       184 ~~-----~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-~  253 (436)
                      ..     .    ...+||.+.+ ..++.++|+||+|+++. +.++..             ..+-...+..++...+.. .
T Consensus       154 ~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~-~l~~~g-------------~~p~~~~~~~~~~~~~~~~~  218 (256)
T cd05059         154 QYTSSQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMW-EVFSEG-------------KMPYERFSNSEVVESVSAGY  218 (256)
T ss_pred             cccccCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHHH-HHhccC-------------CCCCCCCCHHHHHHHHHcCC
Confidence            11     1    1337887765 46788999999965443 322100             001011122222222221 1


Q ss_pred             C---CCCCHHHHHHHH-HHHcCCCCCcccHHHHHHHH
Q 042392          254 G---SMLTEFDVKQLM-EAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 ~---~~~s~~~i~~l~-~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .   ......++..++ +++..+++.|+++.|.+..+
T Consensus       219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            1   111223444444 45567888999998887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.1e-29  Score=239.08  Aligned_cols=262  Identities=19%  Similarity=0.199  Sum_probs=191.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ..|++++.||+|+-+.||++.. ...+.||+|.+......  ......+.+|+..|.+|.+|.+||++++|-..++.+|+
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D--~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEAD--NQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcC--HHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            3599999999999999999986 45567888876544332  45677899999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||-+. +|..+|++... .+...++.++.|++.|+.++|.+||||.||||.|+|+    -.|.+||+|||.|.-+.++
T Consensus       438 vmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~aI~~D  512 (677)
T KOG0596|consen  438 VMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANAIQPD  512 (677)
T ss_pred             Eeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcccCcc
Confidence            9999865 99999988765 4445888999999999999999999999999999999    4689999999999988764


Q ss_pred             CCC----------CCCChHHHHHHHH----------HHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCC
Q 042392          184 GGE----------ASDDTSVILRMKQ----------FRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       184 ~~~----------~~~~pe~~~~~~~----------~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      ...          ...+||.+..+..          .++++|+||+ +|++++++    +..++.....-+..+ .+++.
T Consensus       513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSL-GCILYqMvYgktPf~~~~n~~aKl~aI-~~P~~  590 (677)
T KOG0596|consen  513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSL-GCILYQMVYGKTPFGQIINQIAKLHAI-TDPNH  590 (677)
T ss_pred             ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhh-hhHHHHHHhcCCchHHHHHHHHHHHhh-cCCCc
Confidence            332          1128999886542          3579999999 77777665    333333222222222 13333


Q ss_pred             ccCHHHHHHHHHhcCCCCCHH-HHHHHHHHHcCCCCCcccHHHHHHHHHhh---hhhccHHHHHHHHHHhC
Q 042392          240 TLSYDELRAGLTKVGSMLTEF-DVKQLMEAADMDGNGAIDYTEFTAATIQR---QKLERSEYLSKAFQYFD  306 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~~s~~-~i~~l~~~~d~d~~g~i~~~EF~~~~~~~---~~~~~~~~l~~~F~~~D  306 (436)
                      .|.+.++          ++.. -++-|=.++-.|++.|.+..|.+.+-...   ...+....+..-+-.++
T Consensus       591 ~Iefp~~----------~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~~m~~~~~~~~k~~  651 (677)
T KOG0596|consen  591 EIEFPDI----------PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVEQMAKLTTNEMKYV  651 (677)
T ss_pred             cccccCC----------CCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccchHHHHHHHHHHHhc
Confidence            3333222          2222 34444445678999999999998874322   22333445555566665

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=8e-29  Score=231.79  Aligned_cols=182  Identities=24%  Similarity=0.342  Sum_probs=155.7

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|.+..+|..||+|++.......  .....+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~--~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v   77 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG--GIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLV   77 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc--hhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEE
Confidence            5899999999999999999999999999999987654322  3345688999999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          106 MELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      +||+ +++|.+++... ..+++..++.++.||+.||.|||+.+++|+||||+||++   +.++.++|+|||++.......
T Consensus        78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCC
Confidence            9999 89999998754 458999999999999999999999999999999999999   678899999999998765432


Q ss_pred             C---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 G---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .         ....+||.+.+...++.++|+|++|+.++
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~  192 (286)
T cd07832         154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFA  192 (286)
T ss_pred             CCccccccCcccccCceeeeccccCCchhHHHHHHHHHH
Confidence            1         11228888776666788999999955543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=8.9e-29  Score=232.62  Aligned_cols=184  Identities=23%  Similarity=0.296  Sum_probs=151.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe---
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA---  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~---  101 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+......  ......+.+|+.+++.+.+||||+++++++.....   
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~   78 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK   78 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence            4699999999999999999999999999999988654322  12334678899999999767999999999877665   


Q ss_pred             --EEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC-CCcEEEEe
Q 042392          102 --VHVVMELCQGGDLFDRIIAK-----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTD  173 (436)
Q Consensus       102 --~~iv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~-~~~~kl~D  173 (436)
                        +|+||||+++ +|.+++...     ..+++..++.++.||+.||.|||+.+|+||||||+||++   +. ++.+||+|
T Consensus        79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~---~~~~~~~kl~d  154 (295)
T cd07837          79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV---DKQKGLLKIAD  154 (295)
T ss_pred             ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---ecCCCeEEEee
Confidence              8999999986 898888653     247999999999999999999999999999999999999   55 78999999


Q ss_pred             cCCcccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          174 FGSALLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       174 FG~a~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||++........        ....+||.+.+...++.++|+|++|++++
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  203 (295)
T cd07837         155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFA  203 (295)
T ss_pred             cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHH
Confidence            999886533211        12338998877667788999999965543

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.9e-29  Score=232.61  Aligned_cols=184  Identities=25%  Similarity=0.281  Sum_probs=155.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..++|++.+.||.|+||.||+|.+..++..||+|++....    ......+.+|+.+++.+ +||||+++++++.....+
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   77 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKL   77 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Confidence            4567999999999999999999998899999999986542    23445688999999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+++++|..++... ..+++..++.++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++....
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          78 WILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             EEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhc
Confidence            9999999999999998774 469999999999999999999999999999999999999   778899999999987654


Q ss_pred             ccCC--------CCCCChHHHHH----HHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG--------EASDDTSVILR----MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~--------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~  214 (436)
                      ....        ....+||.+..    ...++.++|+||+|+.++
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~  199 (280)
T cd06611         155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI  199 (280)
T ss_pred             ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHH
Confidence            3221        11237888753    234667899999955543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=1.5e-28  Score=231.83  Aligned_cols=248  Identities=18%  Similarity=0.188  Sum_probs=180.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .++....+|.+.+.||+|+||.||+|.+.     .++..||+|.+.....   ......+.+|+.+++.+.+||||++++
T Consensus        29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~  105 (302)
T cd05055          29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLL  105 (302)
T ss_pred             cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEE
Confidence            35566678999999999999999999853     3456899998865432   233456889999999995699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      +++...+.+|+||||+++|+|.+++....  .+++..+..++.|++.||.|||+++|+|+||||+||++   +.++.++|
T Consensus       106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l  182 (302)
T cd05055         106 GACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKI  182 (302)
T ss_pred             EEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEE
Confidence            99999999999999999999999997643  38999999999999999999999999999999999999   67789999


Q ss_pred             EecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCc
Q 042392          172 TDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       172 ~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +|||++........          ....+||.+.+ ..++.++|+||+|++++.... +..              +..+.
T Consensus       183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~--------------p~~~~  247 (302)
T cd05055         183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSN--------------PYPGM  247 (302)
T ss_pred             CCCcccccccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCC--------------CcCCC
Confidence            99999986543221          11237887765 457889999999665532211 100              00111


Q ss_pred             cCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          241 LSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       241 i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...+++...+..-     ....+.+-.+.+.+++..+++.|+++.|.+..+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~  299 (302)
T cd05055         248 PVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG  299 (302)
T ss_pred             CchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            1112222222211     1122333334444556678888999998886653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5.5e-29  Score=245.60  Aligned_cols=175  Identities=18%  Similarity=0.246  Sum_probs=149.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....          ..+.+|+++++.| +||||+++++++...+..+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEE
Confidence            4479999999999999999999999999999996421          2356899999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +|||++. ++|..++... ..+++..++.++.||+.||.|||+.||+||||||+|||+   +..+.+||+|||+|+....
T Consensus       237 lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        237 LVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceeccc
Confidence            9999995 5999988764 459999999999999999999999999999999999999   6778999999999986543


Q ss_pred             cC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EG----------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..          .....+||.+.+ ..|+.++|+||+|++++
T Consensus       313 ~~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~  353 (461)
T PHA03211        313 SWSTPFHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIF  353 (461)
T ss_pred             ccccccccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHH
Confidence            21          112238998876 46888999999965543

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=1.7e-28  Score=227.27  Aligned_cols=241  Identities=17%  Similarity=0.240  Sum_probs=178.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ++|++.+.||+|+||.||+|.+..+   ...||||.+.....   ......+.+|+.+++.+ +||||+++++++...+.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS---DKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRP   79 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC---hHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCc
Confidence            5799999999999999999998644   45899998865432   23445678899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+||||+++++|.+++... +.+++..+..++.|++.|+.|||+.+|+||||||+||++   +.++.++|+|||++...
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~  156 (266)
T cd05033          80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRL  156 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhcc
Confidence            99999999999999999764 468999999999999999999999999999999999999   67889999999999887


Q ss_pred             cccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          181 EEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       181 ~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      .....          ....+||.+.+ ..++.++|+|++|+.+. +.+.             +...+-...+..++...+
T Consensus       157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~-~l~~-------------~g~~p~~~~~~~~~~~~~  221 (266)
T cd05033         157 EDSEATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMW-EVMS-------------YGERPYWDMSNQDVIKAV  221 (266)
T ss_pred             cccccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHH-HHHc-------------cCCCCCCCCCHHHHHHHH
Confidence            52111          11237877654 46788999999965543 3221             000111112233333333


Q ss_pred             Hhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          251 TKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       251 ~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...     ....+..-.+.+.+++..+.+.|+++.|.+..+.
T Consensus       222 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~  263 (266)
T cd05033         222 EDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD  263 (266)
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            221     1112333334455566778888999998887653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=1.6e-28  Score=226.05  Aligned_cols=237  Identities=17%  Similarity=0.213  Sum_probs=173.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.++ .+..+|+|.+.....     ....+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~i   76 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM-----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYI   76 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc-----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEE
Confidence            46899999999999999999875 456799998764322     234678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++|+|.+++... +.+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||.++.....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDD  153 (256)
T ss_pred             EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCC
Confidence            99999999999998753 458999999999999999999999999999999999999   67789999999998865321


Q ss_pred             CC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          184 GG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ..         ....+||.+.+ ..++.++|+||+|+.+. +.++..             ..+-...+..++...+... 
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~-el~~~g-------------~~p~~~~~~~~~~~~i~~~~  218 (256)
T cd05114         154 EYTSSSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMW-EVFTEG-------------KMPFEKKSNYEVVEMISRGF  218 (256)
T ss_pred             ceeccCCCCCchhhCChhhccc-CccchhhhhHHHHHHHH-HHHcCC-------------CCCCCCCCHHHHHHHHHCCC
Confidence            11         11237888764 46888999999955543 322100             0000011112222222211 


Q ss_pred             ---CCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          254 ---GSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 ---~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                         ... .+.+-.+.+.+++..+++.|.++.|.+..+
T Consensus       219 ~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         219 RLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence               111 222233445556778888999998887643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=6.4e-29  Score=248.29  Aligned_cols=187  Identities=21%  Similarity=0.311  Sum_probs=146.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-----CCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-----GQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~~~   98 (436)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++....     .......+|+.+++.+.     +|++++++++++..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            468999999999999999999999999999999986432     12233556777776663     35568999998876


Q ss_pred             C-CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccC------------
Q 042392           99 E-TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRD------------  164 (436)
Q Consensus        99 ~-~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~------------  164 (436)
                      . ..+|+||+++ |++|.+++.+.+.+++..++.++.||+.||.|||+ .||+||||||+|||+...+            
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~  281 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP  281 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence            5 5789999998 67999999888889999999999999999999998 5999999999999994321            


Q ss_pred             -CCCcEEEEecCCcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          165 -DNALLKVTDFGSALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       165 -~~~~~kl~DFG~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                       ....+||+|||.+........     ....|||++.+ ..|+.++|+||+|+ ++.+.+
T Consensus       282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGv-il~ell  339 (467)
T PTZ00284        282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGC-IIYELY  339 (467)
T ss_pred             CCCceEEECCCCccccCccccccccCCccccCcHHhhc-CCCCcHHHHHHHHH-HHHHHH
Confidence             112599999998865432211     12339999877 46889999999954 444443

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=2e-28  Score=232.44  Aligned_cols=248  Identities=17%  Similarity=0.190  Sum_probs=180.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      +....++|.+.+.||+|+||.||+|++..       ....+|+|.+.....   ......+.+|+.+++.+.+||||+++
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~   83 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DKDLADLISEMELMKLIGKHKNIINL   83 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hHHHHHHHHHHHHHHhccCCCCeeeE
Confidence            45556789999999999999999998642       345799998764432   23345688999999999569999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ++++...+.+|+||||+++|+|.+++...                ..++...+..++.|++.||.|||++|++||||||+
T Consensus        84 ~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~  163 (314)
T cd05099          84 LGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAAR  163 (314)
T ss_pred             EEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccce
Confidence            99999999999999999999999999763                23778889999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQAL  226 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l  226 (436)
                      ||++   +.++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|+.++ +.+..      
T Consensus       164 Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~-el~~~------  232 (314)
T cd05099         164 NVLV---TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMW-EIFTL------  232 (314)
T ss_pred             eEEE---cCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHH-HHHhC------
Confidence            9999   6778999999999986543111          12338887765 56888999999965553 22110      


Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                             +..+-...+..++...+..-     ....+.+-.+.+.+++..+.+.|++..|.+..+..
T Consensus       233 -------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~  292 (314)
T cd05099         233 -------GGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK  292 (314)
T ss_pred             -------CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                   00000112233333332221     11223333444555667788999999998876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=4.7e-29  Score=229.42  Aligned_cols=181  Identities=20%  Similarity=0.284  Sum_probs=154.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|.+.+.||+|++|.||+|.+..+++.||+|.+......  ......+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN--RREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC--HHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEE
Confidence            488999999999999999999999999999998754332  23456788999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++++|.+++...  ..+++..++.++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++..+...
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCc
Confidence            9999999999999874  458899999999999999999999999999999999999   67789999999998876543


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ...+||.+.+ ..++.++|+|++|+.+
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  191 (256)
T cd08529         155 TNFANTIVGTPYYLSPELCED-KPYNEKSDVWALGVVL  191 (256)
T ss_pred             cchhhccccCccccCHHHhcC-CCCCCccchHHHHHHH
Confidence            221        1237887765 4577899999995543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=1.4e-28  Score=227.04  Aligned_cols=181  Identities=18%  Similarity=0.235  Sum_probs=151.7

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .-.++|++.+.||+|+||.||+|.+. ++..||+|.+....     .....+.+|+.+++.+ +||||+++++++...+.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   75 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEP   75 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCC
Confidence            44578999999999999999999964 56779999876432     2245688999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          102 VHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .|++|||+++++|.+++.+.  ..++...+..++.|++.||.|||+.+++||||||+||++   +.++.++|+|||++..
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~  152 (261)
T cd05072          76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARV  152 (261)
T ss_pred             cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCcccee
Confidence            99999999999999999764  458888999999999999999999999999999999999   6788999999999987


Q ss_pred             ccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......         ...+||.+.+ ..++.++|+||+|+++
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l  194 (261)
T cd05072         153 IEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILL  194 (261)
T ss_pred             cCCCceeccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHH
Confidence            6432111         1237887755 4678899999995554

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=1.7e-28  Score=234.90  Aligned_cols=249  Identities=16%  Similarity=0.191  Sum_probs=180.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCC-------CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENST-------NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      .|+....+|++.+.||+|+||.||+|.+...       +..||+|.+.....   ......+.+|+++++.+.+||||++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~   82 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT---DKDLSDLVSEMEMMKMIGKHKNIIN   82 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC---HHHHHHHHHHHHHHHhhcCCCCeee
Confidence            4566677899999999999999999986432       23689998764321   2334578899999999966999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCC
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKP  155 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp  155 (436)
                      +++++...+.+|+++||+++|+|.+++.+..                .++...+..++.|++.||.|||++|++||||||
T Consensus        83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp  162 (334)
T cd05100          83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA  162 (334)
T ss_pred             eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence            9999999999999999999999999997642                266788889999999999999999999999999


Q ss_pred             CcceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHH
Q 042392          156 ENFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQA  225 (436)
Q Consensus       156 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~  225 (436)
                      +||++   +.++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|+.++ +.+..     
T Consensus       163 ~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~~-----  232 (334)
T cd05100         163 RNVLV---TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLW-EIFTL-----  232 (334)
T ss_pred             ceEEE---cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHH-HHHhc-----
Confidence            99999   6778999999999986543210          11237887765 46788899999965443 32210     


Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                              +..+-...+.+++...+..-     ....+.+-.+.+.+++..+.+.|+++.|.+..+..
T Consensus       233 --------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~  292 (334)
T cd05100         233 --------GGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR  292 (334)
T ss_pred             --------CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence                    00000112333333333221     11223333444555667788999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=9e-29  Score=229.80  Aligned_cols=185  Identities=22%  Similarity=0.331  Sum_probs=154.7

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc------hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK------YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      +|.+.+.||.|+||.||+|.+..+++.||+|.+.......      .....+.+.+|+.+++.+ +||||+++++++...
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence            5889999999999999999998899999999886432111      112235678899999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+++||||+++++|.+++...+++++..+..++.|++.||.|||+.+++||||+|+||++   +.++.++|+|||++..
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~  157 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK  157 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence            9999999999999999999888889999999999999999999999999999999999999   6788999999999986


Q ss_pred             ccccCC----------CCCCChHHHHHHH-HHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG----------EASDDTSVILRMK-QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~----------~~~~~pe~~~~~~-~~~~~~d~~s~~~~~~  214 (436)
                      ......          ....+||.+.... .++.++|+|++|+.++
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~  203 (272)
T cd06629         158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL  203 (272)
T ss_pred             ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence            543211          1122788876543 4778899999955543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=1.9e-28  Score=225.66  Aligned_cols=236  Identities=16%  Similarity=0.209  Sum_probs=172.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+.. +..+|+|.+.....     ....+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc-----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEE
Confidence            579999999999999999998754 45699998864432     234678999999999 69999999999998899999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++|+|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||++   +.++.+||+|||.++.....
T Consensus        77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCC
Confidence            99999999999999764 358999999999999999999999999999999999999   67789999999998865432


Q ss_pred             CC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-c
Q 042392          184 GG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-V  253 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-~  253 (436)
                      ..         ....+||.+.+ ..++.++|+||+|+.++ +.++.             ...+-......++...+.. .
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~-~l~~~-------------g~~p~~~~~~~~~~~~~~~~~  218 (256)
T cd05113         154 EYTSSVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMW-EVYSL-------------GKMPYERFNNSETVEKVSQGL  218 (256)
T ss_pred             ceeecCCCccChhhCCHHHHhc-CcccchhHHHHHHHHHH-HHhcC-------------CCCCcCcCCHHHHHHHHhcCC
Confidence            11         11237887765 45788999999955543 33210             0001111122222222111 1


Q ss_pred             ----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 ----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          ....+..-.+.+.+++..+.+.|.+..+.+..
T Consensus       219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         219 RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence                11123333444555566788888888887754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.8e-28  Score=226.31  Aligned_cols=184  Identities=22%  Similarity=0.271  Sum_probs=154.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      |+...++|++.+.||+|+||.||+|.+. .++.||||.+.....     ....+.+|+.+++.+ +||||+++++++...
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   73 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEE   73 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecC
Confidence            3456789999999999999999999975 457899999875432     235688999999999 699999999999988


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ..+++||||+++++|.+++....  .++...+..++.|++.|+.|||+++++|+||||+||++   +.++.++|+|||++
T Consensus        74 ~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~  150 (261)
T cd05034          74 EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLA  150 (261)
T ss_pred             CceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccc
Confidence            99999999999999999997653  58999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          178 LLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       178 ~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........         ....+||.+.+ ..++.++|+||+|++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~  195 (261)
T cd05034         151 RLIEDDEYTAREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLT  195 (261)
T ss_pred             eeccchhhhhhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHH
Confidence            87643211         12337887765 45788999999965543

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.96  E-value=1.3e-28  Score=230.50  Aligned_cols=187  Identities=20%  Similarity=0.286  Sum_probs=152.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee-
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE-   97 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-   97 (436)
                      ......++|++.+.||+|+||.||+|.+..+++.+|+|++....     .....+.+|+.+++.+++||||+++++++. 
T Consensus        12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638          12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            34457789999999999999999999999999999999875432     223457789999999866999999999874 


Q ss_pred             ----cCCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcE
Q 042392           98 ----DETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALL  169 (436)
Q Consensus        98 ----~~~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~  169 (436)
                          ....+|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.+++||||||+||++   +.++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCE
Confidence                34579999999999999988753    2458899999999999999999999999999999999999   677889


Q ss_pred             EEEecCCcccccccCC--------CCCCChHHHHHH----HHHHHhhhhhhHHHHH
Q 042392          170 KVTDFGSALLFEEEGG--------EASDDTSVILRM----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       170 kl~DFG~a~~~~~~~~--------~~~~~pe~~~~~----~~~~~~~d~~s~~~~~  213 (436)
                      +|+|||++........        ....+||.+...    ..|+.++|+||+|+.+
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~  219 (286)
T cd06638         164 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA  219 (286)
T ss_pred             EEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence            9999999986543221        112388887532    3478899999995444

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.4e-28  Score=228.57  Aligned_cols=239  Identities=15%  Similarity=0.184  Sum_probs=173.4

Q ss_pred             eeeeeeecccCCeEEEEEEECC---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe--
Q 042392           27 YSFGRMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA--  101 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~--  101 (436)
                      |++.+.||+|+||.||+|....   ++..||+|.+......  ......+.+|+..++.+ +||||+++++++.....  
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   77 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT--YSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQ   77 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccc
Confidence            6788999999999999998764   3478999998754332  23345688999999999 69999999998765443  


Q ss_pred             ----EEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392          102 ----VHVVMELCQGGDLFDRIIAK------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus       102 ----~~iv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                          .++++||+++|+|..++...      ..+++..+..++.|++.||.|||+.+++||||||+||++   +.++.+||
T Consensus        78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl  154 (273)
T cd05035          78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCV  154 (273)
T ss_pred             cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEE
Confidence                79999999999999988553      248899999999999999999999999999999999999   67789999


Q ss_pred             EecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCc
Q 042392          172 TDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       172 ~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +|||+++.......          ....+||.+.+ ..++.++|+||+|+.+ .+.+. ...      .|       .+ 
T Consensus       155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il-~el~~~g~~------p~-------~~-  218 (273)
T cd05035         155 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTM-WEIATRGQT------PY-------PG-  218 (273)
T ss_pred             CCccceeeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHH-HHHHhCCCC------CC-------CC-
Confidence            99999987643221          11237777644 5678899999995444 33331 100      00       00 


Q ss_pred             cCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          241 LSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       241 i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ....++...+..     .....+.+-.+.+.+++..|++.|+++.|.+..+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~  270 (273)
T cd05035         219 VENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLE  270 (273)
T ss_pred             CCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            111222222221     11223344455566667778899999999887653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.4e-28  Score=227.02  Aligned_cols=183  Identities=22%  Similarity=0.274  Sum_probs=153.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|++.+.||+|+||.||+|.+. +++.||+|.+.....     ....+.+|+.+++.+ +||||+++++++...+
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   74 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-----DPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEE   74 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc-----cHHHHHHHHHHHHHC-CCCCccceeEEEecCC
Confidence            345678999999999999999999975 457899999865432     234578999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..|+||||+++++|.+++....  .+++..+..++.|++.|+.|||+.||+||||||+||++   +.++.++|+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~  151 (261)
T cd05068          75 PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLAR  151 (261)
T ss_pred             CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEE
Confidence            9999999999999999997754  58999999999999999999999999999999999999   678899999999998


Q ss_pred             cccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          179 LFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........         ...+||.+.+ ..++.++|+||+|++++
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~  195 (261)
T cd05068         152 VIKEDIYEAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLT  195 (261)
T ss_pred             EccCCcccccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHH
Confidence            76432111         1237876654 46788999999966553

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=2.1e-28  Score=230.35  Aligned_cols=183  Identities=22%  Similarity=0.271  Sum_probs=149.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECC----------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENS----------------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP   87 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~   87 (436)
                      ..+|++.+.||+|+||.||+|.+..                ++..||+|.+.....   ......+.+|+.+++.+ +||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~~E~~~l~~l-~~~   79 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN---KNARNDFLKEIKIMSRL-KDP   79 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC---HHHHHHHHHHHHHHHhC-CCC
Confidence            4579999999999999999986532                345799998865421   23445788999999999 699


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-----------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ||+++++++.....+|+||||+++++|.+++....           .+++..+..++.|++.||.|||+.|++||||||+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~  159 (296)
T cd05095          80 NIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR  159 (296)
T ss_pred             CcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence            99999999999999999999999999999987643           2567789999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||++   +.++.++|+|||++..+.....          ....+||...+ ..++.++|+||+|++++
T Consensus       160 Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~  223 (296)
T cd05095         160 NCLV---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLW  223 (296)
T ss_pred             eEEE---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHH
Confidence            9999   6778999999999986533210          11237877655 46889999999965543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=7.4e-29  Score=228.90  Aligned_cols=242  Identities=16%  Similarity=0.180  Sum_probs=178.4

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +....+|++.+.||.|+||.||+|.+.. +..+|+|++.....    .....+.+|+.+++.+ +||||+++++++....
T Consensus         2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   75 (261)
T cd05148           2 ERPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL----LKQQDFQKEVQALKRL-RHKHLISLFAVCSVGE   75 (261)
T ss_pred             cCcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch----hhHHHHHHHHHHHhcC-CCcchhheeeeEecCC
Confidence            3455679999999999999999999977 88999999875532    2345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+|+||||+++++|.+++.+.  ..++...++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~  152 (261)
T cd05148          76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLAR  152 (261)
T ss_pred             CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchh
Confidence            999999999999999999863  358899999999999999999999999999999999999   778899999999997


Q ss_pred             cccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          179 LFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       179 ~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ........        ...+||.+.+ ..++.++|+|++|+.++ +.++..             ..+-...+..+....+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~-~l~~~g-------------~~p~~~~~~~~~~~~~  217 (261)
T cd05148         153 LIKEDVYLSSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLY-EMFTYG-------------QVPYPGMNNHEVYDQI  217 (261)
T ss_pred             hcCCccccccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHH-HHHcCC-------------CCCCCcCCHHHHHHHH
Confidence            66432111        1227887754 46788999999965443 322100             0000001111111111


Q ss_pred             Hh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          251 TK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       251 ~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..     .....+.+-.+.+.+++..+++.|+++.+.+..+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L  258 (261)
T cd05148         218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL  258 (261)
T ss_pred             HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            11     1122233344445556677888889988887654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=1.4e-28  Score=227.55  Aligned_cols=184  Identities=25%  Similarity=0.372  Sum_probs=153.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--Ce
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~  101 (436)
                      .+|++.+.||+|+||.||.|.+..+++.||||.+....... .......+.+|+.+++.+ +||||+++++++...  ..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence            57999999999999999999999999999999886433221 123345788999999999 699999999998763  56


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||+++++|.+++.+.+.+++..+..++.|++.||.|||+++++|+||||+||++   +.++.++|+|||++....
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence            89999999999999999887788999999999999999999999999999999999999   678899999999997653


Q ss_pred             ccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          182 EEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...           .....+||.+.+ ..++.++|+||+|+++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il  199 (265)
T cd06652         158 TICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTV  199 (265)
T ss_pred             cccccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHH
Confidence            211           111238888765 4578899999995544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=4.3e-30  Score=244.51  Aligned_cols=249  Identities=18%  Similarity=0.248  Sum_probs=185.7

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..|+...+...+...||+|+||+||+|+|-.   .||||++.......  +..+.+++|+.++++-+ |.||+-++|++.
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~--~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~  458 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTP--EQLQAFKNEVAVLKKTR-HENILLFMGACM  458 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCH--HHHHHHHHHHHHHhhcc-hhhheeeehhhc
Confidence            4688888899999999999999999999853   59999998776553  57788999999999995 999999999998


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .+.. .||+.+|.|.+|+.++.-. .++.....+.|++||+.|+.|||.++|||||||..||++   .+++.|||+|||+
T Consensus       459 ~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGL  534 (678)
T KOG0193|consen  459 NPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGL  534 (678)
T ss_pred             CCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccc
Confidence            8876 9999999999999998643 458899999999999999999999999999999999999   6779999999999


Q ss_pred             cccccccC-----CCC-----CCChHHHHHH--HHHHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCCc
Q 042392          177 ALLFEEEG-----GEA-----SDDTSVILRM--KQFRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       177 a~~~~~~~-----~~~-----~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +....--.     ...     ..|||++...  .+|+..+|+|++|. ++++.+    +......-+-+|.    -+.|+
T Consensus       535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGi-V~YELltg~lPysi~~~dqIifm----VGrG~  609 (678)
T KOG0193|consen  535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGI-VWYELLTGELPYSIQNRDQIIFM----VGRGY  609 (678)
T ss_pred             eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhH-HHHHHHhCcCCcCCCChhheEEE----ecccc
Confidence            97643211     111     1199988732  36899999999954 444443    3332222222332    23344


Q ss_pred             cCHHHHHHHHHhcCCCCCHHHHHHHHH-HHcCCCCCcccHHHHHHHHH
Q 042392          241 LSYDELRAGLTKVGSMLTEFDVKQLME-AADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       241 i~~~eL~~~l~~~~~~~s~~~i~~l~~-~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +..+-.+.     . .-..+++.+++. +...+.+.+..|.+.+..+.
T Consensus       610 l~pd~s~~-----~-s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~  651 (678)
T KOG0193|consen  610 LMPDLSKI-----R-SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE  651 (678)
T ss_pred             cCccchhh-----h-ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence            33332211     1 112334544444 45667788888888877543

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.96  E-value=1.9e-28  Score=226.03  Aligned_cols=183  Identities=22%  Similarity=0.276  Sum_probs=150.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      |+...++|++.+.||+|+||.||+|.+. .+..+|+|.+.....     ....+.+|+.+++.+ +||||+++++++. .
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~   72 (260)
T cd05070           1 WEIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-E   72 (260)
T ss_pred             CCCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-C
Confidence            3456778999999999999999999875 566799999865432     234688999999999 6999999999875 4


Q ss_pred             CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ...|++|||+++++|.+++...  ..+++..+..++.|++.||.|||+.+++||||||+||++   +.++.++|+|||++
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~  149 (260)
T cd05070          73 EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLA  149 (260)
T ss_pred             CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceee
Confidence            5689999999999999999764  348999999999999999999999999999999999999   67789999999999


Q ss_pred             ccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          178 LLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       178 ~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........         ....+||.+.+ ..++.++|+||+|++++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~  194 (260)
T cd05070         150 RLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLT  194 (260)
T ss_pred             eeccCcccccccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHH
Confidence            86543221         12337887754 46788999999965543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=7.9e-29  Score=232.82  Aligned_cols=184  Identities=21%  Similarity=0.284  Sum_probs=154.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--Ce
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TA  101 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~  101 (436)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|.+......  ......+.+|+.+++.+ +||||+++++++...  ..
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCc
Confidence            35799999999999999999999999999999998755332  22334567899999999 599999999998877  88


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+||||+++ +|.+++.... .+++..++.++.||+.||.|||+++++||||||+||++   +.++.++|+|||++...
T Consensus        81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREY  156 (293)
T ss_pred             EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeec
Confidence            9999999975 9999887654 48999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......        ...+||.+.+...++.++|+||+|++++
T Consensus       157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  198 (293)
T cd07843         157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFA  198 (293)
T ss_pred             cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHH
Confidence            543211        1238998877666788999999965543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.96  E-value=1.6e-28  Score=226.41  Aligned_cols=236  Identities=23%  Similarity=0.306  Sum_probs=171.0

Q ss_pred             eeeeeecccCCeEEEEEEEC----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           28 SFGRMLGRGRFGVTYLCTEN----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        28 ~~~~~lg~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .+.+.||.|+||.||+|.+.    ..+..|+||.+.....   ......+.+|++.++.+ +||||+++++++...+.++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~   77 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS---EEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLF   77 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS---HHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc---cccceeeeecccccccc-ccccccccccccccccccc
Confidence            46789999999999999987    4467899999954321   23467889999999999 7999999999999888899


Q ss_pred             EEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          104 VVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+|||++|+|.+++...  ..++......++.||+.||.|||+.+++|++|+|+||++   +.++.+||+|||++....
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence            999999999999999987  569999999999999999999999999999999999999   678899999999998772


Q ss_pred             ccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          182 EEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       182 ~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      ....          ....+||.+.. ..++.++|+||+|++++ +.+            ..-..+- ...+..++...+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~-ei~------------~~~~~p~-~~~~~~~~~~~~~  219 (259)
T PF07714_consen  155 EKSKYKNDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLY-EIL------------TLGKFPF-SDYDNEEIIEKLK  219 (259)
T ss_dssp             TSSSEEESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHH-HHH------------TTSSGTT-TTSCHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccc-ccccccccccccccccc-ccc------------ccccccc-ccccccccccccc
Confidence            2111          11128888766 45899999999966654 222            1100111 1224555544443


Q ss_pred             hcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 KVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...     ...+..-...+...+..+++.|.++.+.+..
T Consensus       220 ~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~  258 (259)
T PF07714_consen  220 QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQE  258 (259)
T ss_dssp             TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred             ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence            311     1223443444555667788889999887653

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.96  E-value=2.2e-28  Score=226.83  Aligned_cols=177  Identities=19%  Similarity=0.242  Sum_probs=140.5

Q ss_pred             eeecccCCeEEEEEEECC--CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRGRFGVTYLCTENS--TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +.||+|+||.||+|....  ....+|+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|+||||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~   76 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT---PDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEF   76 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC---hHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEe
Confidence            369999999999996532  345688887654321   23345678899999999 699999999999999999999999


Q ss_pred             cCCCChHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          109 CQGGDLFDRIIAKGY-----YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       109 ~~~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +++|+|.+++.....     .++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++......
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~  153 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPE  153 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccc
Confidence            999999999977432     4577888999999999999999999999999999999   77889999999998754221


Q ss_pred             C------C----CCCCChHHHHH------HHHHHHhhhhhhHHHHHH
Q 042392          184 G------G----EASDDTSVILR------MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~------~----~~~~~pe~~~~------~~~~~~~~d~~s~~~~~~  214 (436)
                      .      .    ....+||++..      ...++.++|+||+|++++
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  200 (269)
T cd05042         154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMW  200 (269)
T ss_pred             hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHH
Confidence            1      1    11237888753      235678999999965543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.96  E-value=1.9e-28  Score=229.94  Aligned_cols=182  Identities=21%  Similarity=0.233  Sum_probs=150.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+......   .....+.+|+.+++.+ +||||+++++++......|+
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~l   80 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTF   80 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEE
Confidence            6799999999999999999999999999999998654322   2233567899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||+++.....
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCC
Confidence            999996 5888777653 457888899999999999999999999999999999999   67889999999998764332


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..        ....+||.+.+...++..+|+||+|+.++
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  195 (291)
T cd07870         157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFI  195 (291)
T ss_pred             CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHH
Confidence            11        11237888766555778899999965543

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.9e-28  Score=224.31  Aligned_cols=237  Identities=16%  Similarity=0.204  Sum_probs=178.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ..+|++.+.||+|+||.||+|...  |+.||+|.+.....     ....+.+|+.+++.+ +||||+++++++......|
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   76 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLY   76 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeE
Confidence            457999999999999999999864  78999999865432     345688999999999 6999999999999899999


Q ss_pred             EEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +||||+++++|.+++....  .+++..+..++.|++.||.|||+.+++||||||+||++   +.++.++|+|||.+....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccc
Confidence            9999999999999998765  68999999999999999999999999999999999999   778899999999998764


Q ss_pred             ccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc---
Q 042392          182 EEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---  253 (436)
Q Consensus       182 ~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~---  253 (436)
                      .....     ...+||.+.. ..++.++|+||+|+.++.. +.             ....+-...+..++...+..-   
T Consensus       154 ~~~~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l-~~-------------~g~~p~~~~~~~~~~~~~~~~~~~  218 (256)
T cd05039         154 QGQDSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEI-YS-------------FGRVPYPRIPLKDVVPHVEKGYRM  218 (256)
T ss_pred             cccccCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHH-Hh-------------cCCCCCCCCCHHHHHHHHhcCCCC
Confidence            32221     1237887654 4678899999996655321 10             000111112333333322221   


Q ss_pred             --CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          254 --GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 --~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                        ....+.+-.+.+.+++..+++.|++..|.+..+
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l  253 (256)
T cd05039         219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL  253 (256)
T ss_pred             CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence              112233334445556677888899998888765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=1.5e-28  Score=227.57  Aligned_cols=183  Identities=23%  Similarity=0.359  Sum_probs=154.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-----hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-----YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +|.+...||+|+||.||+|.+..+++.||+|.+.......     .......+.+|+.+++.+ +||||+++++++....
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence            5788999999999999999998899999999886543322     122345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||+++..
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL  156 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence            999999999999999999888889999999999999999999999999999999999999   77889999999999877


Q ss_pred             cccC--------------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEG--------------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~--------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....              .....+||.+.+ ..++.++|+|++|+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il  202 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLV  202 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHH
Confidence            5211              011227887765 4577889999995444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.96  E-value=3.1e-28  Score=228.45  Aligned_cols=240  Identities=15%  Similarity=0.187  Sum_probs=174.2

Q ss_pred             ceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+.....   ......+.+|+.+++.+ +||||+++++.+...+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   76 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---SSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDG   76 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---HHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCC
Confidence            58889999999999999998753     235689888765432   22345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392          101 AVHVVMELCQGGDLFDRIIAK------------------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ..|+|+||+++++|.+++...                        .++++..++.++.|++.||.|||+.+++||||||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~  156 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR  156 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence            999999999999999998652                        23678889999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQAL  226 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l  226 (436)
                      ||++   +.++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|++++ +.++.      
T Consensus       157 nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~-el~t~------  225 (290)
T cd05045         157 NVLV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLW-EIVTL------  225 (290)
T ss_pred             eEEE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHH-HHHhc------
Confidence            9999   6778999999999976532211          12237887754 46788999999965543 32210      


Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                             ...+-......++...+...     ....+.+-..-+..++..+++.|+++.|.+..+.
T Consensus       226 -------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~  284 (290)
T cd05045         226 -------GGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE  284 (290)
T ss_pred             -------CCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence                   00000011233333333221     1122334444555566778888999988876653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=2.3e-29  Score=249.36  Aligned_cols=245  Identities=21%  Similarity=0.239  Sum_probs=190.8

Q ss_pred             cccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      +....+-.+.+.||+|+||+||+|+..     .....||||.++....   ......++||+.++..| +|||||+++|+
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~---~~~~~dF~REaeLla~l-~H~nIVrLlGV  557 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE---NQARQDFRREAELLAEL-QHPNIVRLLGV  557 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc---HHHHHHHHHHHHHHHhc-cCCCeEEEEEE
Confidence            445567788899999999999999854     2346899999976543   34678899999999999 79999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceee
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAKG--------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFI  161 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~  161 (436)
                      +...+.+|+|+|||..|||.++|+..+              +++..+...++.||+.|+.||-++.+|||||-.+|+|+ 
T Consensus       558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV-  636 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV-  636 (774)
T ss_pred             EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee-
Confidence            999999999999999999999998742              26788999999999999999999999999999999999 


Q ss_pred             ccCCCCcEEEEecCCcccccccCC-CCC---------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhh
Q 042392          162 SRDDNALLKVTDFGSALLFEEEGG-EAS---------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFI  231 (436)
Q Consensus       162 ~~~~~~~~kl~DFG~a~~~~~~~~-~~~---------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~  231 (436)
                        +++..|||+|||+++.+=+... ...         .+||.+.. ..|+..|||||+|+++             +++|.
T Consensus       637 --ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvL-------------WEIFs  700 (774)
T KOG1026|consen  637 --GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVL-------------WEIFS  700 (774)
T ss_pred             --ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-Ccccchhhhhhhhhhh-------------hhhhc
Confidence              7888999999999997643221 111         18888775 6899999999996654             34443


Q ss_pred             hhCCCCCCccCHHHHHHHHHh---c--CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          232 EMDTDKNGTLSYDELRAGLTK---V--GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       232 ~~D~~~~g~i~~~eL~~~l~~---~--~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                       +..-+-.-++-+|....+++   +  ...-+.+-...|......++..|.+|.|.-..+.
T Consensus       701 -yG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~  760 (774)
T KOG1026|consen  701 -YGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ  760 (774)
T ss_pred             -cccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence             23444445666666666664   1  2233444455566666777777888887765543

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.96  E-value=1.2e-28  Score=230.45  Aligned_cols=241  Identities=17%  Similarity=0.197  Sum_probs=177.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+|++.+.||+|+||.||+|.+..+     ++.||+|++.....   ......+.+|+.++..+ +||||+++++++..
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~   79 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---GPLREEFKHEAMMRSRL-QHPNIVCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC
Confidence            34688999999999999999987543     57899999875432   23345688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS  162 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~  162 (436)
                      ....++++||+++++|.+++...                ..++...+..++.|++.||.|||++||+||||||+||++  
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~--  157 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV--  157 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe--
Confidence            99999999999999999998632                237788899999999999999999999999999999999  


Q ss_pred             cCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          163 RDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       163 ~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                       ..++.+||+|||+++.......          ....+||.+.+ ..++.++|+||+|++++ +.++             
T Consensus       158 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~-el~~-------------  221 (283)
T cd05091         158 -FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLW-EVFS-------------  221 (283)
T ss_pred             -cCCCceEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHH-HHHc-------------
Confidence             6778899999999886533211          12238888765 45788999999955543 3321             


Q ss_pred             hCCCCCCccCHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          233 MDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+-...+..++...+....     ...+..-...+.+.++.+++.|.++.|.+..+
T Consensus       222 ~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l  280 (283)
T cd05091         222 YGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL  280 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence            0111111123334444333321     12233333445556778889999999988765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.96  E-value=9.8e-29  Score=232.07  Aligned_cols=188  Identities=23%  Similarity=0.295  Sum_probs=155.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.+.|++++.||+|+||.||+|++..++..||+|.+....    ......+.+|+.+++.+ +||||+++++++...+.
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   83 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGK   83 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCe
Confidence            34577999999999999999999999999999999986543    33456688899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+||||+++++|..++.+ ...+++..+..++.|++.|+.|||+.+++||||||+||++   +.++.++|+|||++...
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKN  160 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceec
Confidence            9999999999999888765 3568999999999999999999999999999999999999   67889999999998764


Q ss_pred             cccCC--------CCCCChHHHHH----HHHHHHhhhhhhHHHHHHHhcC
Q 042392          181 EEEGG--------EASDDTSVILR----MKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .....        ....+||.+.+    ...|+.++|+||+|+ ++.+.+
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~-il~el~  209 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI-TLIEMA  209 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHH-HHHHHh
Confidence            33211        12237887642    234677899999955 444433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=8.8e-30  Score=242.67  Aligned_cols=152  Identities=27%  Similarity=0.424  Sum_probs=140.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .-|..++.||-|+||.|.++....|...||+|.+.+..... ......++.|-.||... +++.||+||-.|++.+.+|+
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~-rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYF  706 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLM-RNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYF  706 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHh-hhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEE
Confidence            44888999999999999999999999999999998876554 34456678899999988 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      ||+|++||++..+|.+.+-|+|..++.++..+.+|+.+.|..|+|||||||.||||   +.+|++||+|||++.-+.
T Consensus       707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfR  780 (1034)
T KOG0608|consen  707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFR  780 (1034)
T ss_pred             EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccce
Confidence            99999999999999999999999999999999999999999999999999999999   899999999999998654

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1.2e-28  Score=236.34  Aligned_cols=184  Identities=26%  Similarity=0.353  Sum_probs=154.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      +..+|++.+.||+|+||.||+|++..+++.||||.+.......  .....+.+|+.+++.+ +||||+++++++...   
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~   79 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR--IDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHRE   79 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc--chhHHHHHHHHHHHhc-CCCCccchHHheeccccc
Confidence            4568999999999999999999999999999999987543222  2344567899999999 699999999987654   


Q ss_pred             --CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 --TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 --~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                        ..+|+|+||+. ++|.+++...+++++..+..++.|++.||.|||+.+++||||||+||++   +.++.+||+|||++
T Consensus        80 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~  155 (337)
T cd07858          80 AFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLA  155 (337)
T ss_pred             ccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCccc
Confidence              34899999996 5999999888889999999999999999999999999999999999999   67789999999999


Q ss_pred             ccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          178 LLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       178 ~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........        ....+||.+.+...++.++|+|++|+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  199 (337)
T cd07858         156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIF  199 (337)
T ss_pred             cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHH
Confidence            87644311        1123899887655688899999996554

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.96  E-value=2e-28  Score=226.70  Aligned_cols=241  Identities=22%  Similarity=0.295  Sum_probs=177.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CCeE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ETAV  102 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~  102 (436)
                      +|+..+.||+|+||.||+|.+..++..||+|.+....... .......+.+|+.+++.+ +||||+++++++..  ...+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence            6899999999999999999999999999999986543221 123345688999999999 69999999998865  3678


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ++++||+++++|.+++...+.+++...+.++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++.....
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence            9999999999999999887789999999999999999999999999999999999999   6778999999999976533


Q ss_pred             cC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          183 EG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       183 ~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      ..           .....+||.+.+ ..++.++|+||+|+ ++.+.+....      .|.       ..-....+.....
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~-i~~el~~g~~------pf~-------~~~~~~~~~~~~~  223 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGC-TVVEMLTEKP------PWA-------EYEAMAAIFKIAT  223 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHH-HHHHHHHCCC------Ccc-------ccchHHHHHHHhc
Confidence            11           111238888765 46788999999954 4444331110      010       0001111111111


Q ss_pred             hc-CC---CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 KV-GS---MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~~-~~---~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .. ..   ......+..+++++..++++|+++.|.+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         224 QPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             CCCCCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            10 00   112345666777777788889988887643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=1.2e-28  Score=230.33  Aligned_cols=182  Identities=24%  Similarity=0.331  Sum_probs=151.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +-|++.+.||+|+||.||+|.+..++..+|+|.+....    ......+.+|+.+++.+ +||||+++++++......|+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~   79 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWI   79 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEE
Confidence            34788999999999999999999999999999986543    23345678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |+||+++++|..++.+ ..++++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++......
T Consensus        80 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~  156 (282)
T cd06643          80 LIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRT  156 (282)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccccc
Confidence            9999999999888765 4568999999999999999999999999999999999999   67889999999998765332


Q ss_pred             CC--------CCCCChHHHH----HHHHHHHhhhhhhHHHHHH
Q 042392          184 GG--------EASDDTSVIL----RMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~--------~~~~~pe~~~----~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..        ....+||.+.    ....++.++|+||+|+.++
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~  199 (282)
T cd06643         157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI  199 (282)
T ss_pred             ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHH
Confidence            11        1123788874    2234677899999955443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=2.4e-28  Score=227.90  Aligned_cols=179  Identities=25%  Similarity=0.386  Sum_probs=144.4

Q ss_pred             eecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeecCCeEEEEEecc
Q 042392           32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      .||+|+||.||+|.+..+++.||+|.+.+..... ........+|..+++.+.  +||||+.+++++...+..|+||||+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence            4899999999999999999999999987654332 122233444544443331  6999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      ++++|.+++...+.+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++........    
T Consensus        80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (279)
T cd05633          80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV  156 (279)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCccCcC
Confidence            999999999888889999999999999999999999999999999999999   7788999999999876543221    


Q ss_pred             --CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 --EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 --~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        ....+||.+.+...++.++|+||+|++++
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~  187 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLF  187 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHH
Confidence              12238888764455788999999955443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.5e-28  Score=225.34  Aligned_cols=182  Identities=24%  Similarity=0.331  Sum_probs=156.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|++.....    .....+.+|+.+++.+ +||||+++++++.....+|
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~   76 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLW   76 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEE
Confidence            4689999999999999999999999999999999875532    2346788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ++|||+++++|.+++... .++++..+..++.|++.|+.|||+++++|+||+|+||++   +.++.++|+|||++.....
T Consensus        77 l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          77 IVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             EEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhh
Confidence            999999999999998876 679999999999999999999999999999999999999   6788999999999987654


Q ss_pred             cCCC--------CCCChHHHHHH--HHHHHhhhhhhHHHHH
Q 042392          183 EGGE--------ASDDTSVILRM--KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~--~~~~~~~d~~s~~~~~  213 (436)
                      ....        ...+||.+.+.  ..++.++|+||+|+++
T Consensus       154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l  194 (262)
T cd06613         154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA  194 (262)
T ss_pred             hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence            2211        12378877653  2677899999995544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=9.5e-29  Score=231.52  Aligned_cols=183  Identities=22%  Similarity=0.335  Sum_probs=155.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+......  ......+.+|+++++.+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i   77 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD--EDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYL   77 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc--ccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEE
Confidence            3799999999999999999999999999999988654322  23346788999999999 59999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||++++.+..+..+...+++..+..++.||+.|+.|||+.+++||||+|+||++   +.++.+||+|||++.......
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          78 VFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCc
Confidence            99999986666666555669999999999999999999999999999999999999   678899999999998765543


Q ss_pred             C---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 G---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .         ....+||.+.+...++.++|+||+|+.+
T Consensus       155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l  192 (288)
T cd07833         155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM  192 (288)
T ss_pred             cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH
Confidence            2         1123888887755788899999996544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=241.29  Aligned_cols=180  Identities=21%  Similarity=0.252  Sum_probs=150.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-eEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-AVH  103 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~~~  103 (436)
                      .+|.-...||+|+||.||+|.-. +|..||||.+......   . ...+.+|+.++..+ +|||+|+++||+.+.+ ..+
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~---~-~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~  148 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQ---G-EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRL  148 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCc---c-hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEE
Confidence            46777789999999999999964 4589999977654432   0 34599999999999 4999999999999888 599


Q ss_pred             EEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---cccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          104 VVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMG---VMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +|+||+++|+|.+.+....  ++++.....|+.+++.||.|||...   |+||||||+|||+   +.+..+||+|||+|+
T Consensus       149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~  225 (361)
T KOG1187|consen  149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAK  225 (361)
T ss_pred             EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcc
Confidence            9999999999999998765  7899999999999999999999743   9999999999999   889999999999997


Q ss_pred             cccc-cC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          179 LFEE-EG--------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~-~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .... ..        .....+||.... ...+.++|+||+|+.++
T Consensus       226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvll  269 (361)
T KOG1187|consen  226 LGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLL  269 (361)
T ss_pred             cCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHH
Confidence            7654 21        112237776654 67889999999966554

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-28  Score=232.21  Aligned_cols=182  Identities=23%  Similarity=0.330  Sum_probs=151.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECC--CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--Ce
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENS--TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TA  101 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~  101 (436)
                      +|++.+.||+|+||.||+|.+..  ++..||+|.+....... ......+.+|+.+++.+ +||||+++++++...  ..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY-TGISQSACREIALLREL-KHENVVSLVEVFLEHADKS   78 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc-cCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCce
Confidence            58999999999999999999988  89999999987643111 22335678899999999 699999999999988  88


Q ss_pred             EEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC----CCcEEEE
Q 042392          102 VHVVMELCQGGDLFDRIIAK-----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD----NALLKVT  172 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~----~~~~kl~  172 (436)
                      +|+||||+++ +|.+++...     ..+++..++.++.|++.||.|||+.+|+||||||+||++   +.    .+.+||+
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~---~~~~~~~~~~kl~  154 (316)
T cd07842          79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILV---MGEGPERGVVKIG  154 (316)
T ss_pred             EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEE---cCCCCccceEEEC
Confidence            9999999975 787777542     258899999999999999999999999999999999999   55    7899999


Q ss_pred             ecCCcccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |||++........           ....+||.+.+...++.++|+||+|+++
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l  206 (316)
T cd07842         155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIF  206 (316)
T ss_pred             CCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            9999987643322           1123899888767788999999996554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.96  E-value=1.6e-28  Score=227.46  Aligned_cols=184  Identities=22%  Similarity=0.350  Sum_probs=154.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc--hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK--YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +|+..+.||+|+||.||+|.+..+++.||+|++.......  .......+.+|+.+++.+ +||||+++++++...+.++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEE
Confidence            4888999999999999999999999999999987543221  122456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC-CcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN-ALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~kl~DFG~a~~~~~  182 (436)
                      +|+||+++++|.+++...+++++..+..++.|++.||.|||++|++||||+|+||++   +.+ ..++|+|||.+.....
T Consensus        80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~---~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI---DSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEccccccccccc
Confidence            999999999999999888889999999999999999999999999999999999999   444 3699999999987654


Q ss_pred             cCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG------------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...            ....+||.+.+ ..++.++|+|++|+++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~  199 (268)
T cd06630         157 KGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVII  199 (268)
T ss_pred             ccccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHH
Confidence            311            11227887755 46788999999955443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=4.2e-28  Score=223.27  Aligned_cols=184  Identities=24%  Similarity=0.319  Sum_probs=155.4

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +|+..+.||+|+||.||+|.+..++..||+|.+....... .......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence            5788899999999999999998899999999986543211 123456788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |+||+++++|.+++.+.+.+++..+..++.|++.|+.|||+.|++|+||+|+||++   +.++.+||+|||++.......
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~  156 (258)
T cd06632          80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFS  156 (258)
T ss_pred             EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceeccccc
Confidence            99999999999999888779999999999999999999999999999999999999   678899999999988754432


Q ss_pred             C-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 G-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .       ....+||.+.....++.++|+|++|+++
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l  192 (258)
T cd06632         157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTV  192 (258)
T ss_pred             cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHH
Confidence            1       1122788876543478899999995544

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.96  E-value=3e-28  Score=226.23  Aligned_cols=239  Identities=16%  Similarity=0.173  Sum_probs=169.3

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCc--eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC-----
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNM--PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE-----   99 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-----   99 (436)
                      |.+.+.||+|+||.||+|.+..++.  .||+|.+......  ......+.+|+.+++.+ +||||+++++++...     
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~   77 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT--RSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEG   77 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccC
Confidence            3567899999999999999877765  6999988654322  23456788999999999 699999999876422     


Q ss_pred             -CeEEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          100 -TAVHVVMELCQGGDLFDRIIAK------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       100 -~~~~iv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                       ...+++|||+++|+|.+++...      ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+
T Consensus        78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~  154 (272)
T cd05075          78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVA  154 (272)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEEC
Confidence             3478999999999999887532      237899999999999999999999999999999999999   678899999


Q ss_pred             ecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          173 DFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       173 DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      |||+++.+.....          ....+||.+.+ ..++.++|+||+|++++ +.++..            ..+-.+ .+
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~-el~~~g------------~~p~~~-~~  219 (272)
T cd05075         155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMW-EIATRG------------QTPYPG-VE  219 (272)
T ss_pred             CCCcccccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHH-HHHcCC------------CCCCCC-CC
Confidence            9999987643211          01226776655 46788999999965553 322100            000001 12


Q ss_pred             HHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          243 YDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       243 ~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..++...+..-     ....+..-.+.+-+++..+++.|+++.|.+..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  268 (272)
T cd05075         220 NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL  268 (272)
T ss_pred             HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            22232222221     112223333444456677888899988887654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.96  E-value=1.3e-28  Score=226.54  Aligned_cols=181  Identities=26%  Similarity=0.379  Sum_probs=154.2

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|+||.||.+++..+++.+++|.+......  ......+.+|+.+++.+ +||||+++++++.....++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~   77 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIE   77 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEE
Confidence            599999999999999999999999999999998655432  23345678999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||++++|.+++.+.  ..+++..+..++.|++.|+.|||+.|++||||+|+||++   +.++.+||+|||++......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEcccc
Confidence            9999999999999875  458999999999999999999999999999999999999   67789999999999876443


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..        ....+||.+.+. .++..+|+||+|+.+
T Consensus       155 ~~~~~~~~~~~~y~ape~~~~~-~~~~~~Dv~slG~i~  191 (256)
T cd08221         155 YSMAETVVGTPYYMSPELCQGV-KYNFKSDIWALGCVL  191 (256)
T ss_pred             cccccccCCCccccCHhhcCCC-CCCCcchhHHHHHHH
Confidence            31        112278877654 467889999995544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.96  E-value=1.8e-28  Score=228.86  Aligned_cols=179  Identities=26%  Similarity=0.338  Sum_probs=148.7

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--CeEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TAVHV  104 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~i  104 (436)
                      |++.+.||+|+||.||+|.+..++..||+|.+.......   ......+|+.+++.+.+||||+++++++.+.  +.+++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL---EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc---hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            788999999999999999999999999999986543221   2223457899999886699999999999887  88999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++ +|.+.+... ..+++..++.++.|++.||.|||+.+++||||+|+||++   +. +.+||+|||++......
T Consensus        78 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          78 VFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccC
Confidence            9999975 888888764 468999999999999999999999999999999999999   55 89999999999876432


Q ss_pred             CCC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...       ...+||.+.....++.++|+||+|+.+
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l  189 (282)
T cd07831         153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVF  189 (282)
T ss_pred             CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHH
Confidence            221       123898876656678899999996443

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=1.1e-28  Score=229.60  Aligned_cols=236  Identities=9%  Similarity=0.039  Sum_probs=165.3

Q ss_pred             eecccCCeEEEEEEECCC------------------------CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC
Q 042392           32 MLGRGRFGVTYLCTENST------------------------NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP   87 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~~~~------------------------~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~   87 (436)
                      .||+|+||.||+|....+                        ...||+|++....    ......+.+|+.+++.+ +||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l-~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQV-SHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcC-CCC
Confidence            599999999999975321                        2458888875432    23345677889999999 699


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc---
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR---  163 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~---  163 (436)
                      ||+++++++......|+||||+++|+|..++.. .+.+++..+..++.||+.||.|||+.+|+||||||+||++...   
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence            999999999999999999999999999998876 4568999999999999999999999999999999999999531   


Q ss_pred             -CCCCcEEEEecCCcccccccC----CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCC
Q 042392          164 -DDNALLKVTDFGSALLFEEEG----GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       164 -~~~~~~kl~DFG~a~~~~~~~----~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~  238 (436)
                       .....+|++|||++.......    .....+||.+.+...++.++|+||+|++++.-.+...              .+-
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~--------------~p~  222 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGE--------------VPL  222 (274)
T ss_pred             cCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCC--------------CCc
Confidence             122358999999886543321    1223388888765678899999999665542211100              000


Q ss_pred             CccCHHHHHHHHHh---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          239 GTLSYDELRAGLTK---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       239 g~i~~~eL~~~l~~---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ...+..+....+..   +..+....-.+.+-+.+..+++.|.++.+.+..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         223 KERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             cccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            01111222222221   1112222233444456677888899999887643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=1.9e-28  Score=232.01  Aligned_cols=184  Identities=22%  Similarity=0.322  Sum_probs=153.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--C
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--T  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~  100 (436)
                      ...+|++.+.||+|+||.||+|.+..+|+.||+|.+.......  .......+|+.+++.+ +||||+++++++...  +
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--GIPISSLREITLLLNL-RHPNIVELKEVVVGKHLD   81 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--CCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCC
Confidence            4568999999999999999999999999999999987543221  2223456899999999 699999999998755  5


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+.+ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++   +..+.+||+|||++..
T Consensus        82 ~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~  157 (309)
T cd07845          82 SIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLART  157 (309)
T ss_pred             eEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeee
Confidence            68999999975 898888763 568999999999999999999999999999999999999   6788999999999987


Q ss_pred             ccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......        ...+||.+.+...++.++|+||+|+.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il  199 (309)
T cd07845         158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCIL  199 (309)
T ss_pred             cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHH
Confidence            6543111        123899887766788999999995544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=1.1e-28  Score=230.90  Aligned_cols=182  Identities=22%  Similarity=0.212  Sum_probs=155.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++.....   ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   80 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK---SSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICM   80 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc---chHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEE
Confidence            579999999999999999999999999999998865432   23456788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++++|.+++...+.+++..+..++.+++.||.|||+ .+++||||||+||++   +.++.++|+|||++......
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh
Confidence            99999999999999888889999999999999999999996 699999999999999   67789999999998765322


Q ss_pred             CC------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..      ....+||.+.+ ..++.++|+||+|++++
T Consensus       158 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~  193 (284)
T cd06620         158 IADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISII  193 (284)
T ss_pred             ccCccccCcccCCHHHHcc-CCCCccchHHHHHHHHH
Confidence            11      12237888765 36788999999965443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=1.5e-28  Score=231.43  Aligned_cols=183  Identities=27%  Similarity=0.336  Sum_probs=155.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|.+..+++.||+|.+.....    .....+.+|+.+++.+ +||||+++++++....
T Consensus        15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~   89 (297)
T cd06656          15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMREN-KNPNIVNYLDSYLVGD   89 (297)
T ss_pred             CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence            4566899999999999999999999999999999999865432    2235678999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..|+||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.+++||||||+||++   +.++.++|+|||++...
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             EEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEc
Confidence            99999999999999998865 458899999999999999999999999999999999999   77889999999998865


Q ss_pred             cccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......        ...+||.+.+ ..++.++|+|++|+.+
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil  205 (297)
T cd06656         166 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  205 (297)
T ss_pred             cCCccCcCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHH
Confidence            433211        1227887765 5677899999995544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=3.3e-28  Score=225.12  Aligned_cols=183  Identities=22%  Similarity=0.323  Sum_probs=152.7

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc--hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK--YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +|++.+.||+|+||.||+|.+ .+++.+|+|.+.......  .......+.+|+.+++.+ +||||+++++++.....+|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence            588899999999999999986 578899999987543221  123345688999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|+||+++++|.+++.+.+++++..+..++.|++.||.|||+.+|+|+||+|+||++   +.++.++|+|||++......
T Consensus        79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhhc
Confidence            999999999999999887889999999999999999999999999999999999999   67889999999998765321


Q ss_pred             C--------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 G--------------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~--------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .              .....+||.+.+ ..++.++|+|++|+.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~  199 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVF  199 (265)
T ss_pred             cccccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHH
Confidence            1              011227777765 45778999999965543

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=4.3e-28  Score=227.93  Aligned_cols=253  Identities=23%  Similarity=0.274  Sum_probs=182.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+......  ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   78 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED--EGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYL   78 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc--ccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEE
Confidence            5799999999999999999999999999999988654322  12335678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          105 VMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ||||+++ +|.+++.....  +++..++.++.||+.||.|||+++++||||+|+||++..  .++.+||+|||++.....
T Consensus        79 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~  155 (294)
T PLN00009         79 VFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGI  155 (294)
T ss_pred             EEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCC
Confidence            9999965 88888876543  578888999999999999999999999999999999931  346799999999976532


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC----CccCH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN----GTLSY  243 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~----g~i~~  243 (436)
                      ...        ....+||.+.+...++.++|+||+|++++ +.+       ...+...+..++..+..+..    +..+.
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~-~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (294)
T PLN00009        156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA-EMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL  234 (294)
T ss_pred             CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence            211        12238888876566788999999965543 332       12233444444443332221    11222


Q ss_pred             HHHHHHHHh--------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          244 DELRAGLTK--------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       244 ~eL~~~l~~--------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .++......        .....+.+..+.+.++++.++..|.+..+.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            222111111        11234455556666777788888888777664

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=3.2e-28  Score=227.04  Aligned_cols=240  Identities=17%  Similarity=0.162  Sum_probs=171.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCce----EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMP----YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .+|++.+.||+|+||.||+|.+..++..    +|+|.+.....   ......+..|+.+++.+ +||||+++++++.. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~   81 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG---RQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-A   81 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc---hHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-C
Confidence            5789999999999999999999877764    66666543211   22335677888888999 69999999998754 5


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..++++||+++|+|.+++... +.+++..+..++.||+.||.|||+.+++||||||+||++   +.++.+||+|||+++.
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~  158 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADL  158 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCcccee
Confidence            578999999999999999764 468999999999999999999999999999999999999   6788999999999986


Q ss_pred             ccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          180 FEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       180 ~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......          ....+||.+.+ ..|+.++|+||+|++++ +.++.             +..+-......++...
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~-el~t~-------------g~~p~~~~~~~~~~~~  223 (279)
T cd05111         159 LYPDDKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVW-EMMSY-------------GAEPYAGMRPHEVPDL  223 (279)
T ss_pred             ccCCCcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHH-HHHcC-------------CCCCCCCCCHHHHHHH
Confidence            533211          11237887765 46889999999955543 32210             0111111122222232


Q ss_pred             HHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          250 LTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       250 l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +..-.     ...+......+.++.+.+++.|.++.|.+..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~  266 (279)
T cd05111         224 LEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFT  266 (279)
T ss_pred             HHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            22111     112233344455677888888999988766543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=1e-28  Score=229.39  Aligned_cols=183  Identities=25%  Similarity=0.317  Sum_probs=151.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      ..+.|++.+.||+|+||.||+|.+..+++.||+|.+.....     ....+.+|+.+++.+.+||||+++++++...   
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence            44679999999999999999999999999999999865432     2346788999999986799999999998653   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          100 ---TAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       100 ---~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                         ..+|+||||+++++|.+++...  ..+++..+..++.|++.|+.|||+++|+||||||+||++   +.++.++|+||
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Df  155 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDF  155 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccC
Confidence               4689999999999999998864  358999999999999999999999999999999999999   67789999999


Q ss_pred             CCcccccccCCC--------CCCChHHHHHH----HHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGGE--------ASDDTSVILRM----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~~--------~~~~pe~~~~~----~~~~~~~d~~s~~~~~  213 (436)
                      |++.........        ...+||.+.+.    ..|+.++|+||+|+.+
T Consensus       156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l  206 (272)
T cd06637         156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA  206 (272)
T ss_pred             CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHH
Confidence            999865432211        12388887632    3577889999995444

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=7e-29  Score=234.74  Aligned_cols=246  Identities=18%  Similarity=0.209  Sum_probs=184.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .+-.+....+.+.||+|.||.|.+|.- ..+..||||+++.....   .....+.+|+++|.+| +|||||++++++..+
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~---~~r~~F~kEIkiLsqL-khPNIveLvGVC~~D  607 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATK---NARNDFLKEIKILSRL-KHPNIVELLGVCVQD  607 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccch---hHHHHHHHHHHHHhcc-CCCCeeEEEeeeecC
Confidence            344566788899999999999999985 34689999999766533   3457899999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      +.+++|+||+++|+|.+++.++..  ..-.....++.||++|++||.+.++|||||.+.|+|+   +.++++||+|||+|
T Consensus       608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgms  684 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMS  684 (807)
T ss_pred             CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccc
Confidence            999999999999999999998733  2344566799999999999999999999999999999   88999999999999


Q ss_pred             ccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +.+-+....          ...|+|.++- ..|+.+||+|.+|+++.             ++|..+-..+-+.++-++..
T Consensus       685 R~lysg~yy~vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlw-------------E~~~~C~e~Py~~lt~e~vv  750 (807)
T KOG1094|consen  685 RNLYSGDYYRVQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLW-------------EVFMLCREQPYSQLTDEQVV  750 (807)
T ss_pred             cccccCCceeeecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHH-------------HHHHHHhhCchhhhhHHHHH
Confidence            965433221          1128888875 58999999999987763             22222222222222222221


Q ss_pred             H----HHHh--------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          248 A----GLTK--------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       248 ~----~l~~--------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .    .+..        .....+.+-.+.|...+-.+...+.+|++.-..+.
T Consensus       751 en~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq  802 (807)
T KOG1094|consen  751 ENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ  802 (807)
T ss_pred             HhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence            1    1111        12233455567777888888888888888765543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=7.4e-29  Score=248.94  Aligned_cols=186  Identities=19%  Similarity=0.353  Sum_probs=142.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCC-CceEEEEEe--------------ecCCccchhhHHHHHHHHHHHHHhcCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENST-NMPYACKSM--------------AKKPKMKYAENDMMIRREIQIRRLLSG   85 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~--------------~~~~~~~~~~~~~~~~~E~~~l~~l~~   85 (436)
                      ..+..+|++++.||+|+||.||+|..+.. +..++.|.+              .+..... ......+.+|+.+|+.+ +
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~Ei~il~~l-~  221 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAG-SRAAIQLENEILALGRL-N  221 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcc-hHHHHHHHHHHHHHHhC-C
Confidence            34567899999999999999999876533 222222211              1111111 22345678999999999 6


Q ss_pred             CCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCccee
Q 042392           86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-----YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCF  160 (436)
Q Consensus        86 h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill  160 (436)
                      ||||+++++++...+..|+|++++.+ +|..++....     ......++.++.||+.||.|||++||+||||||+|||+
T Consensus       222 HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl  300 (501)
T PHA03210        222 HENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL  300 (501)
T ss_pred             CCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            99999999999999999999999964 8888876432     23466788999999999999999999999999999999


Q ss_pred             eccCCCCcEEEEecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          161 ISRDDNALLKVTDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       161 ~~~~~~~~~kl~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                         +.++.+||+|||+|+.+.....         ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       301 ---~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  358 (501)
T PHA03210        301 ---NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLIL  358 (501)
T ss_pred             ---CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHH
Confidence               7788999999999987654221         12238998876 4688999999995554

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=7.4e-28  Score=222.17  Aligned_cols=241  Identities=17%  Similarity=0.190  Sum_probs=176.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      |+...++|++.+.||+|+||.||+|.+. .+..+|+|.+....     .....+.+|+.+++.+ +||||+++++++.. 
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-   72 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-   72 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-----hHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-
Confidence            4667889999999999999999999864 45679999876432     2345688899999999 69999999999887 


Q ss_pred             CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ...|++|||+++++|.+++.+.  ..++...+..++.|++.||.|||+.|++||||||+||++   +..+.+||+|||.+
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~  149 (260)
T cd05073          73 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLA  149 (260)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcce
Confidence            7789999999999999999764  347888899999999999999999999999999999999   67889999999999


Q ss_pred             ccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          178 LLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       178 ~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .........         ...+||.+.+ ..++.++|+||+|+.++ +.++.             +..+-...+..++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~-~l~t~-------------g~~p~~~~~~~~~~~  214 (260)
T cd05073         150 RVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLM-EIVTY-------------GRIPYPGMSNPEVIR  214 (260)
T ss_pred             eeccCCCcccccCCcccccccCHhHhcc-CCcCccccchHHHHHHH-HHHhc-------------CCCCCCCCCHHHHHH
Confidence            766432211         1237887754 46788999999965543 22210             000000011222222


Q ss_pred             HHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+.. .    ....+.+-.+.+.+++..+++.|+++.+....+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L  257 (260)
T cd05073         215 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL  257 (260)
T ss_pred             HHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence            2221 1    112233344455566778888999998887665

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=5.1e-28  Score=223.23  Aligned_cols=240  Identities=17%  Similarity=0.207  Sum_probs=174.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      |+...++|++.+.||+|+||.||+|.. .+++.||+|.+.....     ....+.+|+.+++.+ +||||+++++++. .
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~   72 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-Q   72 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC-----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-c
Confidence            355678899999999999999999986 4678899999875432     234688999999999 6999999999874 4


Q ss_pred             CeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ..+|++|||+++++|.+++...  ..++...+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~  149 (260)
T cd05067          73 EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLA  149 (260)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcce
Confidence            6689999999999999998764  358889999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      ........         ....+||.+.+ ..++.++|+||+|++++ +.++ ..      ..|       .+ .+..++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~-el~~~g~------~p~-------~~-~~~~~~~  213 (260)
T cd05067         150 RLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLT-EIVTYGR------IPY-------PG-MTNPEVI  213 (260)
T ss_pred             eecCCCCcccccCCcccccccCHHHhcc-CCcCcccchHHHHHHHH-HHHhCCC------CCC-------CC-CChHHHH
Confidence            87652211         12337887654 45788999999966553 2221 00      000       01 1112222


Q ss_pred             HHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          248 AGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       248 ~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+.. .    ....+.+-.+.+.+++..+++.|++++++...+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l  257 (260)
T cd05067         214 QNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVL  257 (260)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHh
Confidence            22111 1    112233334444455677888889888887654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=1.4e-28  Score=235.46  Aligned_cols=184  Identities=22%  Similarity=0.307  Sum_probs=154.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----   98 (436)
                      +..+|.+.+.||+|+||.||+|.+..++..||+|++......  ......+.+|+.+++.+ +||||+++++++..    
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   79 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGAD   79 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCC
Confidence            347899999999999999999999999999999998754322  23345677899999999 59999999998763    


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||+.+|+||||||+||++   +.++.+||+|||++.
T Consensus        80 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~  155 (334)
T cd07855          80 FKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMAR  155 (334)
T ss_pred             CceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccce
Confidence            356899999996 5999999877789999999999999999999999999999999999999   778899999999997


Q ss_pred             cccccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......            ....+||.+.+...++.++|+|++|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l  202 (334)
T cd07855         156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIF  202 (334)
T ss_pred             eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHH
Confidence            6543211            1123799887766788999999996443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=9.8e-28  Score=222.33  Aligned_cols=241  Identities=17%  Similarity=0.204  Sum_probs=177.2

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+|+..+.||+|+||.||+|++..++.   .+|+|.+.....   ......+.+|+.+++.+ +||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---EKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFK   79 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCC
Confidence            3478899999999999999999876654   799998865432   22345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++++|.+++... +.+++..+..++.|++.|+.|||+.|++||||||+||++   +.++.+||+|||++..
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~  156 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRV  156 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCcccee
Confidence            999999999999999999764 568999999999999999999999999999999999999   6778999999999986


Q ss_pred             ccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          180 FEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       180 ~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .......           ...+||.+.+ ..++.++|+||+|+.++ +.+..             +..+-...+..++..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~-ell~~-------------g~~p~~~~~~~~~~~  221 (268)
T cd05063         157 LEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMW-EVMSF-------------GERPYWDMSNHEVMK  221 (268)
T ss_pred             cccccccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHH-HHHhC-------------CCCCCCcCCHHHHHH
Confidence            6432111           1237887765 46788999999955543 32210             000000111222333


Q ss_pred             HHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+....     ...+.+-.+.+.+++..+++.|+++.+.+..+
T Consensus       222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l  264 (268)
T cd05063         222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL  264 (268)
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            222211     11233334455556667888899998887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=5.9e-28  Score=222.52  Aligned_cols=234  Identities=21%  Similarity=0.267  Sum_probs=176.3

Q ss_pred             eeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           31 RMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      +.||+|+||.||+|.+...   +..||+|.+......   .....+.+|+.+++.+ +||||+++++++.....+++|||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEE
Confidence            4699999999999999865   899999998765432   1356788999999999 59999999999999999999999


Q ss_pred             ccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          108 LCQGGDLFDRIIAK---------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       108 ~~~~g~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      |+++++|.+++...         ..+++..++.++.|++.||.|||+++++||||||+||++   +.++.++|+|||.+.
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~  153 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSR  153 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEccccccc
Confidence            99999999999885         679999999999999999999999999999999999999   777999999999998


Q ss_pred             cccccC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEG----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      ......          .....+||.+... .++.++|+||+|+.++ +.++.             ...+-...+..++..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~-~l~~~-------------g~~p~~~~~~~~~~~  218 (262)
T cd00192         154 DVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLW-EIFTL-------------GATPYPGLSNEEVLE  218 (262)
T ss_pred             ccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHH-HHHhc-------------CCCCCCCCCHHHHHH
Confidence            876532          0112388877664 6889999999965543 22210             000001113333333


Q ss_pred             HHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+..-     ....+.+-.+.+.+++..+.+.|++..+.+..+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             HHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            33321     112233334445556677888899998887653

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.96  E-value=4.2e-28  Score=226.57  Aligned_cols=240  Identities=20%  Similarity=0.210  Sum_probs=171.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHH-HHhcCCCCCeeeceeeeecCCeEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .+|++.+.||+|+||.||+|++..+|+.||+|.+......   .....+..|+.+ ++.+ +||||+++++++...+.+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~-~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSV-DCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHc-CCCCeeeeeEEEecCCcEE
Confidence            3699999999999999999999999999999998765322   223445566665 4555 7999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          104 VVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +||||+++ +|.+++...    ..+++..++.++.||+.|+.|||++ +++||||||+||++   +.++.+||+|||++.
T Consensus        77 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~  152 (283)
T cd06617          77 ICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISG  152 (283)
T ss_pred             EEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccc
Confidence            99999974 888877652    3589999999999999999999997 99999999999999   778899999999998


Q ss_pred             cccccCC-------CCCCChHHHHHH---HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRM---KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~---~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .+.....       ....+||.+.+.   ..++.++|+|++|+.+ .+.+....      .|   +   +..-..+.+..
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l-~~l~~g~~------p~---~---~~~~~~~~~~~  219 (283)
T cd06617         153 YLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM-IELATGRF------PY---D---SWKTPFQQLKQ  219 (283)
T ss_pred             ccccccccccccCCccccChhhcCCcccccccCccccchhhHHHH-HHHHhCCC------CC---C---ccccCHHHHHH
Confidence            6543211       112388877542   3567899999995544 33331110      00   0   01111223333


Q ss_pred             HHHhcCC-----CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          249 GLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       249 ~l~~~~~-----~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .......     ..+.+-.+.+-+++..+++.|+++.+.+..
T Consensus       220 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         220 VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3222111     123333334444566788899999888764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=4e-28  Score=226.90  Aligned_cols=181  Identities=22%  Similarity=0.313  Sum_probs=153.1

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|++|.||+|++..+|..||||++......   .....+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   76 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLV   76 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEE
Confidence            589999999999999999999999999999998765322   2234567899999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          106 MELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||+++ +|.+++....   .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++.....
T Consensus        77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGI  152 (284)
T ss_pred             EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcC
Confidence            999986 8988887643   58999999999999999999999999999999999999   7788999999999976533


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...        ....+||.+.+...++.++|+|++|++++
T Consensus       153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  192 (284)
T cd07836         153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA  192 (284)
T ss_pred             CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence            211        12237888876666788999999965543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=5.7e-28  Score=226.76  Aligned_cols=242  Identities=19%  Similarity=0.184  Sum_probs=176.8

Q ss_pred             cceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .+|.+.+.||+|+||.||+|.+.     .++..+|+|.+....    ......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT----LAARKDFQREAELLTNL-QHEHIVKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc----HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccC
Confidence            46999999999999999999864     345678999875433    23345688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR  163 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~  163 (436)
                      ...++||||+++++|.+++...+                .+++..++.++.||+.|+.|||++||+||||||+||++   
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---  156 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---  156 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---
Confidence            99999999999999999997643                37889999999999999999999999999999999999   


Q ss_pred             CCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhh
Q 042392          164 DDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEM  233 (436)
Q Consensus       164 ~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~  233 (436)
                      +.++.++|+|||++........          ....+||.+.+ ..++.++|+||+|+++ .+.++             .
T Consensus       157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~el~t-------------~  221 (291)
T cd05094         157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVIL-WEIFT-------------Y  221 (291)
T ss_pred             ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHH-HHHHh-------------C
Confidence            6788999999999976533211          11238887765 5678899999995544 33321             0


Q ss_pred             CCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          234 DTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       234 D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +..+-...+..++...+..-     ....+..-.+.+.+++..+++.|++..+....+...
T Consensus       222 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         222 GKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             CCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            01111112222222222221     112233333445556677888899999888776544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.96  E-value=2.2e-28  Score=226.66  Aligned_cols=238  Identities=18%  Similarity=0.243  Sum_probs=169.6

Q ss_pred             ccceeeeeee--cccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           24 MLHYSFGRML--GRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        24 ~~~y~~~~~l--g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ..+|.+.+.+  |+|+||.||++.++.++..+|+|.+.......         .|+.....+.+||||+++++++...+.
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---------~e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---------IEPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---------hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            3567776666  99999999999999999999999986543211         122223323369999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC-cEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~-~~kl~DFG~a~~~  180 (436)
                      +|+||||+++++|.+++.....+++..++.++.|++.|+.|||+.|++||||||+||++   +.++ .++|+|||++...
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIYLCDYGLCKII  160 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---eCCCCeEEEecCccceec
Confidence            99999999999999999888789999999999999999999999999999999999999   5555 8999999999876


Q ss_pred             cccCCC----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc---
Q 042392          181 EEEGGE----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---  253 (436)
Q Consensus       181 ~~~~~~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~---  253 (436)
                      ......    ...+||.+.+ ..++.++|+||+|+.++....+..       .|   .......+....+.......   
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~-------p~---~~~~~~~~~~~~~~~~~~~~~~~  229 (267)
T PHA03390        161 GTPSCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKH-------PF---KEDEDEELDLESLLKRQQKKLPF  229 (267)
T ss_pred             CCCccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCC-------CC---CCCCcchhhHHHHHHhhcccCCc
Confidence            543221    2238888866 457889999999655432221110       11   11111122233332222111   


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCcc-cHHHHHH
Q 042392          254 GSMLTEFDVKQLMEAADMDGNGAI-DYTEFTA  284 (436)
Q Consensus       254 ~~~~s~~~i~~l~~~~d~d~~g~i-~~~EF~~  284 (436)
                      ....+..-.+.+-+.+..++..|+ +++|.+.
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            112344445556666777888887 4677764

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=2.4e-28  Score=228.63  Aligned_cols=183  Identities=21%  Similarity=0.231  Sum_probs=152.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++++.||+|+||.||+|.+..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   76 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD---ESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYM   76 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEE
Confidence            468999999999999999999999999999998865421   22345688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          105 VMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ||||+++++|..++...   ..+++..+..++.|++.||.|||+ .+|+||||||+||++   +.++.++|+|||++...
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCcccc
Confidence            99999999998888763   368999999999999999999996 599999999999999   66889999999999765


Q ss_pred             cccCCC------CCCChHHHHHHH-----HHHHhhhhhhHHHHHH
Q 042392          181 EEEGGE------ASDDTSVILRMK-----QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~~------~~~~pe~~~~~~-----~~~~~~d~~s~~~~~~  214 (436)
                      ......      ...+||.+.+..     .++.++|+|++|+.+.
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  198 (286)
T cd06622         154 VASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL  198 (286)
T ss_pred             cCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence            332111      223788775432     3577899999955443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.96  E-value=5.8e-28  Score=226.37  Aligned_cols=241  Identities=15%  Similarity=0.134  Sum_probs=176.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+|++.+.||+|+||.||+|.+.     .++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~   79 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEF-DHPNIVKLLGVCAV   79 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---HHHHHHHHHHHHHHHhc-CCCchheEEEEEcC
Confidence            457999999999999999999874     3678999999865432   23345688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG----------------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      ...+|+||||+++|+|.+++....                      .+++..++.++.|++.||.|||..+++||||||+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            999999999999999999997532                      3677888999999999999999999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQAL  226 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l  226 (436)
                      ||++   +.++.++|+|||++........          ....+||.+.+ ..++.++|+||+|+.+ .+.++       
T Consensus       160 nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il-~el~~-------  227 (288)
T cd05050         160 NCLV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVL-WEIFS-------  227 (288)
T ss_pred             heEe---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHH-HHHHh-------
Confidence            9999   6788999999999876432210          11337887765 4688899999995544 33321       


Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                            +...+-.-.+.+++...+..-     ....+.+-.+.+.+++..+++.|+++.|.+..+
T Consensus       228 ------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l  286 (288)
T cd05050         228 ------YGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRIL  286 (288)
T ss_pred             ------CCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence                  000000012223333322221     112233444455556677888899988877543

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.2e-28  Score=230.36  Aligned_cols=251  Identities=24%  Similarity=0.257  Sum_probs=180.2

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|++|.||+|++..++..||||.+......  ......+.+|+++++.+ +||||+++++++......|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   77 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLV   77 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEE
Confidence            488999999999999999999999999999988654322  22335688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+. ++|..++...  ..+++..+..++.|++.||.|||..+++||||+|+||++   +.++.+||+|||++......
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVP  153 (284)
T ss_pred             eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccC
Confidence            99996 5898888763  458999999999999999999999999999999999999   77889999999998765432


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCcc-CHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTL-SYDELR  247 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i-~~~eL~  247 (436)
                      ..        ....+||.+.+...++.++|+|++|+.++ +.+       +.++...+.+++..+..+....- ....+.
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~-~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07860         154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA-EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLP  232 (284)
T ss_pred             ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHH
Confidence            11        11237887766555678899999965543 322       12333444444444433322110 011111


Q ss_pred             HHHH-----------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          248 AGLT-----------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       248 ~~l~-----------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ....           .....++.+..+.+.+++..|++.|++..|.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            1111           111123344444555666777888887776653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.96  E-value=1.7e-28  Score=225.68  Aligned_cols=183  Identities=23%  Similarity=0.396  Sum_probs=153.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+......  ......+.+|+.+++.+ +||||+++++.+...+.+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT--KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIV   77 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc--cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEE
Confidence            589999999999999999999999999999998765432  23456788999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.|||++|++||||+|+||++.  ..++.++|+|||++......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCC
Confidence            9999999999999874  3489999999999999999999999999999999999993  23456899999999876543


Q ss_pred             CC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG-------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..       ....+||.+.+ ..++.++|+||+|+.++
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~  192 (256)
T cd08220         156 SKAYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLY  192 (256)
T ss_pred             ccccccccCCcccCchhccC-CCCCcccchHHHHHHHH
Confidence            21       12237888765 35678899999965543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.96  E-value=3.5e-30  Score=242.75  Aligned_cols=181  Identities=23%  Similarity=0.323  Sum_probs=154.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .|+...+...-++.||+|+.|.||+|+.  .++.||||.++..           -..+|..|++| +|||||.+.+++..
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~el-----------kETdIKHLRkL-kH~NII~FkGVCtq  183 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVREL-----------KETDIKHLRKL-KHPNIITFKGVCTQ  183 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhh-----------hhhhHHHHHhc-cCcceeeEeeeecC
Confidence            3555555566689999999999999985  4788999987422           23688899999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...++||||||..|-|...|+....+.......|..+|+.|++|||.+.|||||||.-|||+   ..+..|||+|||.++
T Consensus       184 sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI---s~~d~VKIsDFGTS~  260 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI---SYDDVVKISDFGTSK  260 (904)
T ss_pred             CceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe---eccceEEeccccchH
Confidence            99999999999999999999999899999999999999999999999999999999999999   567799999999999


Q ss_pred             cccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          179 LFEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       179 ~~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .+.......       ..|||++.. .+.+.++||||+|+ ++.+++
T Consensus       261 e~~~~STkMSFaGTVaWMAPEvIrn-ePcsEKVDIwSfGV-VLWEmL  305 (904)
T KOG4721|consen  261 ELSDKSTKMSFAGTVAWMAPEVIRN-EPCSEKVDIWSFGV-VLWEML  305 (904)
T ss_pred             hhhhhhhhhhhhhhHhhhCHHHhhc-CCcccccceehhHH-HHHHHH
Confidence            876643322       228999876 57889999999954 555555

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=6.2e-28  Score=222.13  Aligned_cols=237  Identities=15%  Similarity=0.196  Sum_probs=171.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee-cCCe
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE-DETA  101 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-~~~~  101 (436)
                      -..+|++.+.||+|+||.||+|...  |..||+|.+....      ....+.+|+.+++.+ +|||++++++++. ....
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~------~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   74 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA------TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGG   74 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc------hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCc
Confidence            3568999999999999999999864  7889999885432      234678999999999 6999999999754 5567


Q ss_pred             EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +|+||||+++++|.+++.+..  .+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++..
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~  151 (256)
T cd05082          75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKE  151 (256)
T ss_pred             eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCcccee
Confidence            999999999999999998754  37889999999999999999999999999999999999   7788999999999986


Q ss_pred             ccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          180 FEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       180 ~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ........     ..+||.+.+ ..++.++|+|++|++++ +.++             ....+-...+..++...+..- 
T Consensus       152 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~-~l~~-------------~g~~p~~~~~~~~~~~~~~~~~  216 (256)
T cd05082         152 ASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLW-EIYS-------------FGRVPYPRIPLKDVVPRVEKGY  216 (256)
T ss_pred             ccccCCCCccceeecCHHHHcc-CCCCchhhhHHHHHHHH-HHHh-------------CCCCCCCCCCHHHHHHHHhcCC
Confidence            54432221     237887654 46788999999955543 2221             001111112223332222210 


Q ss_pred             ----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          254 ----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 ----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                          ....+..-.+-+.+.+..+++.|+++.+....+
T Consensus       217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l  253 (256)
T cd05082         217 KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQL  253 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence                111222223334455667888888888887654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=6.2e-28  Score=222.29  Aligned_cols=232  Identities=16%  Similarity=0.161  Sum_probs=168.8

Q ss_pred             eecccCCeEEEEEEE--CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           32 MLGRGRFGVTYLCTE--NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      .||+|+||.||+|.+  ..++..+|+|++......  ......+.+|+.+++.+ +||||+++++++.. ...++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~   77 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND--PALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELA   77 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecC
Confidence            589999999999965  456889999988654322  34456788999999999 69999999998754 5679999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      ++|+|.+++.....+++..+..++.|++.||.|||++||+||||||.||++   +.++.+||+|||++........    
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~  154 (257)
T cd05116          78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKA  154 (257)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeee
Confidence            999999999887889999999999999999999999999999999999999   6778999999999987643221    


Q ss_pred             -------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----
Q 042392          186 -------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----  253 (436)
Q Consensus       186 -------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----  253 (436)
                             ....+||.+.. ..++..+|+||+|+.++ +.++.             ...+-......++...+..-     
T Consensus       155 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~t~-------------g~~p~~~~~~~~~~~~i~~~~~~~~  219 (257)
T cd05116         155 KTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMW-EAFSY-------------GQKPYKGMKGNEVTQMIESGERMEC  219 (257)
T ss_pred             cCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHHH-HHHhC-------------CCCCCCCCCHHHHHHHHHCCCCCCC
Confidence                   12237887654 46778999999955443 32210             00111112223333333321     


Q ss_pred             CCCCCHHHHHHHH-HHHcCCCCCcccHHHHHHHH
Q 042392          254 GSMLTEFDVKQLM-EAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 ~~~~s~~~i~~l~-~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+ .++..++ ..+..|.+.|+++.+....+
T Consensus       220 ~~~~~-~~l~~li~~~~~~~p~~Rp~~~~i~~~l  252 (257)
T cd05116         220 PQRCP-PEMYDLMKLCWTYGVDERPGFAVVELRL  252 (257)
T ss_pred             CCCCC-HHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence            11223 3344444 44567888889888876554

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=2.1e-28  Score=225.47  Aligned_cols=174  Identities=13%  Similarity=0.104  Sum_probs=143.2

Q ss_pred             eeecccCCeEEEEEEECCCC----------ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           31 RMLGRGRFGVTYLCTENSTN----------MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~----------~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +.||+|+||.||+|.+..++          ..+++|.+....     .....+.+|+.+++.+ +||||+++++++.. .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQL-SHKHLVKLYGVCVR-D   73 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcC-CCcchhheeeEEec-C
Confidence            46899999999999998776          357777664332     1146788999999999 69999999999887 7


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC-------cEEEE
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-------LLKVT  172 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~-------~~kl~  172 (436)
                      ..++||||+++|+|.+++...+ .++...+..++.||+.||.|||++||+||||||+||++.   ..+       .+||+
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~---~~~~~~~~~~~~kl~  150 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVA---RYGLNEGYVPFIKLS  150 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEe---cCccccCCceeEEeC
Confidence            7899999999999999998766 689999999999999999999999999999999999994   444       79999


Q ss_pred             ecCCcccccccC----CCCCCChHHHHHH-HHHHHhhhhhhHHHHHH
Q 042392          173 DFGSALLFEEEG----GEASDDTSVILRM-KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       173 DFG~a~~~~~~~----~~~~~~pe~~~~~-~~~~~~~d~~s~~~~~~  214 (436)
                      |||++.......    .....+||.+.+. ..++.++|+||+|+.++
T Consensus       151 Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~  197 (259)
T cd05037         151 DPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLL  197 (259)
T ss_pred             CCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHH
Confidence            999998754422    1223388888764 46788999999965543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=1e-27  Score=221.30  Aligned_cols=182  Identities=24%  Similarity=0.293  Sum_probs=148.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|.+.+.||+|+||.||+|.+..+ ..+|+|.+.....     ....+.+|+.+++.+ +|||++++++++. .+
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~   73 (260)
T cd05069           2 EIPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM-----MPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EE   73 (260)
T ss_pred             cCChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc-----cHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CC
Confidence            44567899999999999999999998654 4699998764432     234678899999999 6999999999875 45


Q ss_pred             eEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..|+||||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++.
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~  150 (260)
T cd05069          74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLAR  150 (260)
T ss_pred             CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccce
Confidence            6899999999999999997643  37889999999999999999999999999999999999   778899999999997


Q ss_pred             cccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          179 LFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........         ...+||...+ ..++.++|+||+|++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~  194 (260)
T cd05069         151 LIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLT  194 (260)
T ss_pred             EccCCcccccCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHH
Confidence            65432211         1237776654 45788999999966554

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=9e-28  Score=222.73  Aligned_cols=183  Identities=20%  Similarity=0.294  Sum_probs=152.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ...|++.+.||+|+||.||+|.+..+++   .||||.+.....   ......+.+|+.+++.+ +||||+++++++....
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~   78 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT---EKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSR   78 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCC
Confidence            3568999999999999999999877665   599999865422   23456788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+++||||+++++|.+++... +.+++..++.++.|++.||.|||++|++||||||+||++   +.++.++|+|||++..
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~  155 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRF  155 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccc
Confidence            999999999999999998764 458999999999999999999999999999999999999   6778999999999876


Q ss_pred             ccccCCC-------------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGGE-------------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~~-------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .......             ...+||.+.+ ..++.++|+||+|+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~  202 (269)
T cd05065         156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMW  202 (269)
T ss_pred             cccCccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHH
Confidence            5432111             1237887764 46788999999955543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=8.4e-29  Score=228.23  Aligned_cols=236  Identities=11%  Similarity=0.059  Sum_probs=167.2

Q ss_pred             eeecccCCeEEEEEEECCCCc-------eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           31 RMLGRGRFGVTYLCTENSTNM-------PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~-------~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +.||+|+||.||+|.+..++.       ++|+|.+....    ......+.+|+.+++.+ +||||+++++++......+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH----RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh----HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcE
Confidence            469999999999999865543       48888775432    23345678899999999 6999999999999989999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-----CCCcEEEEecCCc
Q 042392          104 VVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-----DNALLKVTDFGSA  177 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-----~~~~~kl~DFG~a  177 (436)
                      +||||+++|+|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+||++...+     ..+.++++|||++
T Consensus        76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence            9999999999999998754 489999999999999999999999999999999999995321     1123799999998


Q ss_pred             ccccccCC----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-
Q 042392          178 LLFEEEGG----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-  252 (436)
Q Consensus       178 ~~~~~~~~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-  252 (436)
                      ........    ....+||.+.+...++.++|+||+|+.++ +.+...             ..+....+.......... 
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~-~l~~g~-------------~~~~~~~~~~~~~~~~~~~  221 (258)
T cd05078         156 ITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLW-EIFSGG-------------DKPLSALDSQKKLQFYEDR  221 (258)
T ss_pred             cccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHH-HHHcCC-------------CCChhhccHHHHHHHHHcc
Confidence            76544221    12338998877667888999999955543 332110             000011111111111111 


Q ss_pred             --cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 --VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 --~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        +....+.+-.+.+.+.+..+++.|+++.+.+..
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         222 HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence              111222333344455667788889999888754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.96  E-value=6.5e-29  Score=231.48  Aligned_cols=175  Identities=28%  Similarity=0.380  Sum_probs=147.6

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||+|+||.||+|.+..+|+.||+|.+....... ......+.+|+.+++.+ +||||+++++++...+.+|+||||++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK-RKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh-hhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            689999999999999999999999987643222 22344567899999999 6999999999999999999999999999


Q ss_pred             ChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-----
Q 042392          113 DLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-----  185 (436)
Q Consensus       113 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-----  185 (436)
                      +|.+++.+..  .+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||.+........     
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (277)
T cd05577          79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRA  155 (277)
T ss_pred             cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCcccccc
Confidence            9999998765  68999999999999999999999999999999999999   7788999999999876543211     


Q ss_pred             --CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 --EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 --~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                        ....+||.+.+. .++.++|+|++|+++
T Consensus       156 ~~~~y~~PE~~~~~-~~~~~~Di~slG~il  184 (277)
T cd05577         156 GTPGYMAPEVLQGE-VYDFSVDWFALGCTL  184 (277)
T ss_pred             CCCCcCCHHHhcCC-CCCchhhhHHHHHHH
Confidence              122378887653 478899999996554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=5.6e-28  Score=227.36  Aligned_cols=183  Identities=26%  Similarity=0.328  Sum_probs=155.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|.+..+++.||+|.+......    ....+.+|+.+++.+ +||||+++++.+....
T Consensus        16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~   90 (296)
T cd06654          16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN-KNPNIVNYLDSYLVGD   90 (296)
T ss_pred             CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc----hHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCC
Confidence            44567899999999999999999999999999999998764422    235678999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..|+||||+++++|.+++.. ..+++.++..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~  166 (296)
T cd06654          91 ELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             EEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhc
Confidence            99999999999999998865 458899999999999999999999999999999999999   67789999999998765


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....        ....+||.+.+ ..++.++|+|++|+.+
T Consensus       167 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil  206 (296)
T cd06654         167 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  206 (296)
T ss_pred             cccccccCcccCCccccCHHHHcC-CCCCccchHHHHHHHH
Confidence            43221        11227887765 4567899999995544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.96  E-value=6e-30  Score=241.67  Aligned_cols=185  Identities=26%  Similarity=0.335  Sum_probs=157.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh----hHHHHHHHHHHHHHhcC--CCCCeeeceeeeec
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA----ENDMMIRREIQIRRLLS--GQPNIVELKSAHED   98 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~----~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~   98 (436)
                      .+|+.++.+|.|+||.|++|.++++...|+||.+.+...-...    ...-.+-.||+||..|.  .||||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4599999999999999999999999999999999775322111    11112456999999993  39999999999999


Q ss_pred             CCeEEEEEec-cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMEL-CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      .+++||+||- -+|.+|+++|..+..++|.++..+++||+.|+.+||.+||||||||-+|+.+   +.+|-+||+|||.|
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa  717 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA  717 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence            9999999996 4677999999999999999999999999999999999999999999999999   88999999999999


Q ss_pred             ccccccCCC------CCCChHHHHHHHHHHHhhhhhhHHHH
Q 042392          178 LLFEEEGGE------ASDDTSVILRMKQFRRMSKLKKLTVK  212 (436)
Q Consensus       178 ~~~~~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~  212 (436)
                      ....+..-.      ..-|||++.|.++-..+-|||++|+-
T Consensus       718 a~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgil  758 (772)
T KOG1152|consen  718 AYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL  758 (772)
T ss_pred             hhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence            887654322      12299999998888899999998553

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=3.3e-28  Score=230.30  Aligned_cols=188  Identities=21%  Similarity=0.335  Sum_probs=153.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|.+..+++.||||.+.......  .....+.+|+.+++.+ +||||+++++++...
T Consensus         7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~   83 (310)
T cd07865           7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--GFPITALREIKILQLL-KHENVVNLIEICRTK   83 (310)
T ss_pred             ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--CchhHHHHHHHHHHhC-CCCCccceEEEEecc
Confidence            3456678999999999999999999999999999999986543221  2233467899999999 699999999987654


Q ss_pred             C--------eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392          100 T--------AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       100 ~--------~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      .        ..|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||++|++||||||+||++   +.++.+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~k  159 (310)
T cd07865          84 ATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILK  159 (310)
T ss_pred             cccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEE
Confidence            3        46999999975 8888887653 58999999999999999999999999999999999999   7788999


Q ss_pred             EEecCCcccccccCCC------------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          171 VTDFGSALLFEEEGGE------------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       171 l~DFG~a~~~~~~~~~------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+|||++.........            ...+||.+.+...++.++|+||+|+.++
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~  215 (310)
T cd07865         160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMA  215 (310)
T ss_pred             ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHH
Confidence            9999999866432211            1238998877666788999999965543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=5.3e-28  Score=225.42  Aligned_cols=178  Identities=24%  Similarity=0.355  Sum_probs=143.9

Q ss_pred             eecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH---HHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ---IRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~---~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +||+|+||.||+|.+..+++.||+|.+.+..... .........|..   .++.. +||||+++++++.....+|+||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeecccccc-chhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999999999999999987654322 111222333433   34444 699999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---
Q 042392          109 CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---  185 (436)
Q Consensus       109 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---  185 (436)
                      ++|++|..++...+.+++..++.++.|++.|+.|||+.+|+||||||+||++   +.++.++|+|||++..+.....   
T Consensus        79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~~~~~  155 (278)
T cd05606          79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS  155 (278)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccCCcCc
Confidence            9999999999888889999999999999999999999999999999999999   6788999999999876543221   


Q ss_pred             ---CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ---EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ---~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         ....+||.+.+...++.++|+||+|++++
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~  187 (278)
T cd05606         156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF  187 (278)
T ss_pred             CCCcCCcCcHHhcCCCCCCcccchHhHHHHHH
Confidence               12228888875446788999999955543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7e-30  Score=245.57  Aligned_cols=185  Identities=21%  Similarity=0.348  Sum_probs=157.1

Q ss_pred             cccceeee-----eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           23 VMLHYSFG-----RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        23 ~~~~y~~~-----~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +.-.|...     -+||+|+||+||-|++..|....|||.+.....    ....-+..||.+.+.| .|.|||++++.+.
T Consensus       568 iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds----r~~QPLhEEIaLH~~L-rHkNIVrYLGs~s  642 (1226)
T KOG4279|consen  568 IEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS----REVQPLHEEIALHSTL-RHKNIVRYLGSVS  642 (1226)
T ss_pred             eEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccc----hhhccHHHHHHHHHHH-hhHhHHHHhhccC
Confidence            44455553     369999999999999999999999999976542    3344578899999999 5999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-GYY--SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-~~~--~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ..+.+-|.||-++||+|.+++++. +++  .+..+..+.+||++||.|||.+.|||||||-.|+|++  +-.|.+||+||
T Consensus       643 enGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDF  720 (1226)
T KOG4279|consen  643 ENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDF  720 (1226)
T ss_pred             CCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEeccc
Confidence            999999999999999999999875 666  7889999999999999999999999999999999996  45689999999


Q ss_pred             CCcccccccCCCC--------CCChHHHH-HHHHHHHhhhhhhHHHHHH
Q 042392          175 GSALLFEEEGGEA--------SDDTSVIL-RMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       175 G~a~~~~~~~~~~--------~~~pe~~~-~~~~~~~~~d~~s~~~~~~  214 (436)
                      |.++.+..-.+..        ..|||++. |.+.|+++.||||+|++++
T Consensus       721 GTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~v  769 (1226)
T KOG4279|consen  721 GTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMV  769 (1226)
T ss_pred             ccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeE
Confidence            9999875432221        12999987 6678999999999966553

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.3e-27  Score=222.85  Aligned_cols=241  Identities=19%  Similarity=0.197  Sum_probs=177.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNM----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+|++.+.||+|+||.||+|.++.+|.    .+|+|.+.....   ......+.+|+.+++.+ +||||+++++++.. 
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASV-DHPHVVRLLGICLS-   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-
Confidence            4679999999999999999999877665    589998765432   23456688999999999 69999999999887 


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...++||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+++++||||||+||++   +.++.+||+|||+++
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~  157 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAK  157 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccc
Confidence            7899999999999999999874 458999999999999999999999999999999999999   677899999999998


Q ss_pred             cccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .......          ....+||.+.. ..++.++|+||+|+.++ +.++             ++..+-......++..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~-el~~-------------~g~~p~~~~~~~~~~~  222 (279)
T cd05057         158 LLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVW-ELMT-------------FGAKPYEGIPAVEIPD  222 (279)
T ss_pred             cccCcccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHH-HHhc-------------CCCCCCCCCCHHHHHH
Confidence            7653221          11237887754 46788999999965543 3221             0111111123344444


Q ss_pred             HHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          249 GLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       249 ~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+....     ...+..-.+.+.+++..+.+.+.++.+.+..+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~  266 (279)
T cd05057         223 LLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFS  266 (279)
T ss_pred             HHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            433211     111222234445556677888888888776554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=9.2e-28  Score=221.14  Aligned_cols=234  Identities=17%  Similarity=0.178  Sum_probs=171.8

Q ss_pred             eeecccCCeEEEEEEECCCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           31 RMLGRGRFGVTYLCTENSTN---MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      +.||+|+||.||+|.+..++   ..||+|.+......   .....+.+|+.+++.+ +||||+++++++. ...+++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEE
Confidence            46999999999999876554   78999998755432   2445788999999999 6999999999876 456899999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC-
Q 042392          108 LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE-  186 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~-  186 (436)
                      |+++|+|.+++...+.+++..+..++.|++.|+.|||..+++||||||+||++   +.++.+||+|||+++........ 
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCccc
Confidence            99999999999887789999999999999999999999999999999999999   67889999999999866433211 


Q ss_pred             ----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc--
Q 042392          187 ----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV--  253 (436)
Q Consensus       187 ----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~--  253 (436)
                                ...+||.+.+ ..++.++|+||+|+++..-.. +..               +-...+..++...+...  
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~---------------p~~~~~~~~~~~~~~~~~~  216 (257)
T cd05060         153 RATTAGRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAK---------------PYGEMKGAEVIAMLESGER  216 (257)
T ss_pred             ccccCccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCC---------------CcccCCHHHHHHHHHcCCc
Confidence                      1237887754 467889999999655532211 111               00111222333332221  


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          254 ---GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       254 ---~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                         ....+..-.+.+-+++..+++.|+++.+....+..
T Consensus       217 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~  254 (257)
T cd05060         217 LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR  254 (257)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence               11122233344445566788899999998876643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.1e-30  Score=235.97  Aligned_cols=189  Identities=29%  Similarity=0.394  Sum_probs=167.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -...|+.-++||+|+||.||-|+-+.||+.||+|.+.+....+ .......++|-++|.++ +.|.||.+--+|++++.+
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk-r~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~L  260 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK-RKGETMALNEKQILEKV-SSPFIVSLAYAFETKDAL  260 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH-hhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCce
Confidence            3456888999999999999999999999999999987765544 34456678999999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 HVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ++||..|.||+|.-.|...+  .+++..++.++.+|+.||.+||..+||.|||||+|||+   ++.|+++|+|+|+|..+
T Consensus       261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEI  337 (591)
T ss_pred             EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEec
Confidence            99999999999988887766  59999999999999999999999999999999999999   89999999999999988


Q ss_pred             cccCCCCC-------CChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          181 EEEGGEAS-------DDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       181 ~~~~~~~~-------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ........       .|||++.+.. |+...|.|++ +|++.+++
T Consensus       338 ~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~l-GCllYemi  380 (591)
T KOG0986|consen  338 PEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSL-GCLLYEMI  380 (591)
T ss_pred             CCCCccccccCcccccCHHHHcCCc-ccCCccHHHH-HhHHHHHH
Confidence            76544333       2999999865 9999999999 77777766

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.96  E-value=8.3e-28  Score=223.68  Aligned_cols=182  Identities=19%  Similarity=0.201  Sum_probs=150.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ++|++.+.||+|+||.||+|+.+.     +.+.||+|.+.....   ......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   80 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD---ENLQSEFRRELDMFRKL-SHKNVVRLLGLCREA   80 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc---hHHHHHHHHHHHHHHhc-CCcceeeeEEEECCC
Confidence            679999999999999999999754     346799998754321   22445688999999999 699999999999998


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG---------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      ...|+||||+++|+|.+++....         .+++..+..++.|++.||.|||+.+|+||||||+||++   +..+.++
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~  157 (275)
T cd05046          81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVK  157 (275)
T ss_pred             CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEE
Confidence            99999999999999999998765         68999999999999999999999999999999999999   6778999


Q ss_pred             EEecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          171 VTDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       171 l~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ++|||++........         ....+||.+.+ ..++.++|+||+|++++
T Consensus       158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~  209 (275)
T cd05046         158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMW  209 (275)
T ss_pred             EcccccccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHH
Confidence            999999875432111         11237887664 34678899999966553

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=4.3e-28  Score=233.90  Aligned_cols=182  Identities=23%  Similarity=0.311  Sum_probs=151.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      .+..+|++.+.||+|+||.||+|.+..+++.||||.+.+....  ......+.+|+.+++.+ +||||+++++++...  
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   89 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN--VTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKS   89 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC--hhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCC
Confidence            4678999999999999999999999999999999998654322  23345577899999999 699999999988644  


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                          ..+|+||||+.+ +|.+.+...  +++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        90 ~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg  163 (353)
T cd07850          90 LEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFG  163 (353)
T ss_pred             ccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCc
Confidence                357999999965 898887654  8999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          176 SALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       176 ~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ++.........       ...+||.+.+ ..++.++|+||+|+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l  207 (353)
T cd07850         164 LARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  207 (353)
T ss_pred             cceeCCCCCCCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHH
Confidence            99876443211       1238888866 4688899999995544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=5.2e-28  Score=223.84  Aligned_cols=183  Identities=22%  Similarity=0.337  Sum_probs=156.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||.|+||.||+|.+..++..+|+|++......   .....+.+|+.+++.+ +||||+++++.+......|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWL   76 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEE
Confidence            4799999999999999999999889999999998654322   2456788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          105 VMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |||++++++|.+++...   ..+++..++.++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||++..+.
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLA  153 (267)
T ss_pred             EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhc
Confidence            99999999999999774   358999999999999999999999999999999999999   677899999999988765


Q ss_pred             ccCCCC------------CCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGEA------------SDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~~------------~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......            ..+||.+.....++.++|+|++|++++
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~  198 (267)
T cd06610         154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAI  198 (267)
T ss_pred             cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHH
Confidence            432221            127888876557888999999955543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=1.6e-27  Score=222.10  Aligned_cols=181  Identities=22%  Similarity=0.311  Sum_probs=154.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ...|+..+.||.|+||.||+|.+..++..||+|++.....   ......+.+|+.+++.+ +||||+++++++.....+|
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEE
Confidence            3568889999999999999999999999999999875432   23456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||+++++|.+++.. +++++..+..++.|++.|+.|||+.+++|+||+|+||++   +.++.++|+|||++......
T Consensus        79 lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06640          79 IIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCC
Confidence            99999999999998865 568999999999999999999999999999999999999   67789999999999776442


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ...+||.+.+ ..++.++|+||+|+.+
T Consensus       155 ~~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il  191 (277)
T cd06640         155 QIKRNTFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITA  191 (277)
T ss_pred             ccccccccCcccccCHhHhcc-CCCccHHHHHHHHHHH
Confidence            211        1238887765 4578899999995544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.5e-28  Score=226.15  Aligned_cols=181  Identities=22%  Similarity=0.339  Sum_probs=155.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||.|+||.||+|.+..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA---EDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWI   76 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc---chHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEE
Confidence            368999999999999999999999999999999875432   22345678999999999 59999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |+||+++++|.+++... ++++..++.++.|++.|+.|||+.+++||||+|+||++   +.++.++|+|||+++......
T Consensus        77 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          77 IMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             EEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccc
Confidence            99999999999998765 78999999999999999999999999999999999999   778899999999998775431


Q ss_pred             CC--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 GE--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..        ...+||.+.+. .++.++|+|++|++++
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~~-~~~~~sDv~slG~il~  189 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQS-GYDEKADIWSLGITAI  189 (274)
T ss_pred             cccccccCCccccChhhhccC-CCCchhhHHHHHHHHH
Confidence            11        12378887764 4889999999955443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-27  Score=222.13  Aligned_cols=234  Identities=17%  Similarity=0.193  Sum_probs=168.9

Q ss_pred             eeecccCCeEEEEEEECCCCc--eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRGRFGVTYLCTENSTNM--PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +.||+|+||.||+|++..++.  .+|+|.+.....   ......+.+|+.+++.+.+||||+++++++...+.+|+||||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   77 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   77 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC---HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence            368999999999999988775  468887754321   233456889999999996799999999999999999999999


Q ss_pred             cCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          109 CQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       109 ~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +++|+|.+++....                .+++..++.++.|++.|+.|||+.|++||||||+||++   +.++.+||+
T Consensus        78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~  154 (270)
T cd05047          78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIA  154 (270)
T ss_pred             CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEEC
Confidence            99999999997642                37888999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC--hhhHHHHHHHhhhhCCCCCCccCH
Q 042392          173 DFGSALLFEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP--GEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       173 DFG~a~~~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~--~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      |||++.......       .....+||.+.. ..++.++|+||+|+.++ +.++  ...       |.       + .+.
T Consensus       155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~-el~~~g~~p-------f~-------~-~~~  217 (270)
T cd05047         155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLW-EIVSLGGTP-------YC-------G-MTC  217 (270)
T ss_pred             CCCCccccchhhhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHH-HHHcCCCCC-------cc-------c-cCH
Confidence            999986332111       011337887654 56788999999955443 3321  110       00       0 111


Q ss_pred             HHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          244 DELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       244 ~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .++...+..     .....+.+-.+.+.+++..++..|+++.+.+..+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  266 (270)
T cd05047         218 AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN  266 (270)
T ss_pred             HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence            111111111     11122334445566667778888999999887653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=8.3e-28  Score=226.15  Aligned_cols=182  Identities=25%  Similarity=0.345  Sum_probs=154.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|++.+.||.|+||.||+|.+..+++.||+|.+.....    .....+.+|+.+++.+ +||||+++++++.....+
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   91 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDEL   91 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceE
Confidence            34679999999999999999999999999999999865432    2345678999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|+||+++++|..++.. ..+++..+..++.|++.|+.|||+.|++||||||+||++   +.++.++|+|||++.....
T Consensus        92 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             EEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccc
Confidence            999999999999998865 458999999999999999999999999999999999999   6788999999999886544


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....        ...+||.+.+ ..++.++|+||+|+.+.
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~  206 (296)
T cd06655         168 EQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAI  206 (296)
T ss_pred             ccccCCCcCCCccccCcchhcC-CCCCchhhHHHHHHHHH
Confidence            3211        1227887764 45778999999955443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.6e-29  Score=235.48  Aligned_cols=244  Identities=17%  Similarity=0.184  Sum_probs=194.0

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..|+.-+.+.+....||-|.||.||.|.|+.-...||||.++...     .....++.|..+|+.+ +|||+|++++++.
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-----MeveEFLkEAAvMKei-kHpNLVqLLGVCT  333 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCT  333 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-----hhHHHHHHHHHHHHhh-cCccHHHHhhhhc
Confidence            456666777888999999999999999999999999999987653     3457899999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      .+..+|||+|||.+|+|.+++++..+  ++.-....++.||.+|+.||..+++|||||...|+|+   +++..||++|||
T Consensus       334 ~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFG  410 (1157)
T KOG4278|consen  334 HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFG  410 (1157)
T ss_pred             cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccc
Confidence            99999999999999999999998754  6777788999999999999999999999999999999   788899999999


Q ss_pred             CcccccccCCCCC---------CChHHHHHHHHHHHhhhhhhHHHHHH--Hh-cCCh---hhHHHHHHHhh---hhCCCC
Q 042392          176 SALLFEEEGGEAS---------DDTSVILRMKQFRRMSKLKKLTVKVI--VE-YLPG---EETQALKEKFI---EMDTDK  237 (436)
Q Consensus       176 ~a~~~~~~~~~~~---------~~pe~~~~~~~~~~~~d~~s~~~~~~--~~-~l~~---e~~~~l~~~F~---~~D~~~  237 (436)
                      +++.+..+..++.         .|||.+.. ..|+.++|+|++|+.+.  +. -+++   =+..+.+.+..   .+|.+.
T Consensus       411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~Pe  489 (1157)
T KOG4278|consen  411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPE  489 (1157)
T ss_pred             hhhhhcCCceecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCC
Confidence            9999877544322         28888765 67999999999966541  11 1222   22222222221   345544


Q ss_pred             CCccCHHHHHHHHHhcC--CCCCHHHHHHHHHHHcC
Q 042392          238 NGTLSYDELRAGLTKVG--SMLTEFDVKQLMEAADM  271 (436)
Q Consensus       238 ~g~i~~~eL~~~l~~~~--~~~s~~~i~~l~~~~d~  271 (436)
                      ......-||+..++++.  ..++..++.+-|+.+-.
T Consensus       490 GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  490 GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            45566778888888775  36777888887776533

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=1.5e-27  Score=219.79  Aligned_cols=232  Identities=17%  Similarity=0.201  Sum_probs=165.9

Q ss_pred             eecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           32 MLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      .||+|+||.||+|.+.  .++..||+|++.....   ......+.+|+.+++.+ +||||+++++++.. ...++||||+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~   76 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE---KSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMA   76 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC---hHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeC
Confidence            3899999999999875  4456799998865432   23445688999999999 69999999998864 5689999999


Q ss_pred             CCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---
Q 042392          110 QGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---  185 (436)
Q Consensus       110 ~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---  185 (436)
                      ++++|.+++.. ...+++..++.++.|++.||.|||++|++||||||+||++   +.++.+||+|||++........   
T Consensus        77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~  153 (257)
T cd05115          77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYK  153 (257)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCcccee
Confidence            99999999875 3468999999999999999999999999999999999999   6778999999999975533211   


Q ss_pred             --------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC---
Q 042392          186 --------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG---  254 (436)
Q Consensus       186 --------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~---  254 (436)
                              ....+||.+.+ ..++.++|+||+|++++ +.++.             ...+-......++...+.+..   
T Consensus       154 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~~-------------g~~p~~~~~~~~~~~~~~~~~~~~  218 (257)
T cd05115         154 ARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITMW-EAFSY-------------GQKPYKKMKGPEVMSFIEQGKRLD  218 (257)
T ss_pred             ccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHHH-HHhcC-------------CCCCcCcCCHHHHHHHHHCCCCCC
Confidence                    12337887765 45788999999965543 32210             011111122223333322211   


Q ss_pred             -CCCCHHHHHHHHH-HHcCCCCCcccHHHHHHHH
Q 042392          255 -SMLTEFDVKQLME-AADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       255 -~~~s~~~i~~l~~-~~d~d~~g~i~~~EF~~~~  286 (436)
                       ......++..++. .+..+.+.|+++.+....+
T Consensus       219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l  252 (257)
T cd05115         219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERM  252 (257)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence             0111234444444 4566788889888886554

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=3.8e-28  Score=232.74  Aligned_cols=183  Identities=25%  Similarity=0.329  Sum_probs=151.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.....   ......+.+|+.+++.+ +||||+++++++...   
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~   78 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH---QTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFE   78 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc---chhHHHHHHHHHHHHhC-CCCCcCchhheeeccccc
Confidence            45789999999999999999999999999999999854221   22345577899999999 599999999886544   


Q ss_pred             --CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 --TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 --~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                        ..+|+|+||+.+ +|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++
T Consensus        79 ~~~~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~  153 (336)
T cd07849          79 SFNDVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLA  153 (336)
T ss_pred             ccceEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccce
Confidence              358999999975 88887754 469999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          178 LLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       178 ~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........           ....+||.+.+...++.++|+||+|+.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~  201 (336)
T cd07849         154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILA  201 (336)
T ss_pred             eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHH
Confidence            76543211           11238998876667889999999965543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=1.4e-28  Score=234.75  Aligned_cols=179  Identities=18%  Similarity=0.275  Sum_probs=148.8

Q ss_pred             eeeeeccc--CCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           29 FGRMLGRG--RFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        29 ~~~~lg~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      ++++||+|  +||+||++.++.+|+.||+|.+......  ......+.+|+.+++.+ +||||+++++++..++..|+||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT--NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVT   78 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc--HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEE
Confidence            56889999  6789999999999999999998655332  23455788899999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          107 ELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||+++|+|.+++...  ..+++..++.++.|++.||.|||+++|+||||||+||++   +.++.++++|||.+.......
T Consensus        79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~  155 (327)
T cd08227          79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHG  155 (327)
T ss_pred             eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhcccccc
Confidence            999999999999763  458999999999999999999999999999999999999   677899999998655432211


Q ss_pred             C---------------CCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          185 G---------------EASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~---------------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                      .               ....+||.+.+. ..|+.++|+||+|+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il  200 (327)
T cd08227         156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA  200 (327)
T ss_pred             ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHH
Confidence            1               112389988753 4588999999995544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=5.8e-28  Score=226.60  Aligned_cols=185  Identities=23%  Similarity=0.387  Sum_probs=154.7

Q ss_pred             ceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +|++.+.||.|+||.||+|.+.   .+|..||+|++..............+.+|+.+++.+.+||||+++++++.....+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4889999999999999999874   4789999999875433222234456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++++|.+++....++++..+..++.|++.||.|||+.|++||||+|+||++   +.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceeccc
Confidence            9999999999999999888889999999999999999999999999999999999999   6788999999999987644


Q ss_pred             cCC---------CCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          183 EGG---------EASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~---------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                      ...         ....+||.+.+. ..++.++|+|++|+.+
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l  198 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLM  198 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHH
Confidence            221         122378887642 2456789999995544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=1.3e-27  Score=225.75  Aligned_cols=240  Identities=19%  Similarity=0.207  Sum_probs=172.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNM----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .+|+..+.||+|+||.||+|.+..++.    .||+|.+.....   ......+.+|+.+++.+ +||||+++++++... 
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---PKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---HHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-
Confidence            568899999999999999999987776    468887754332   22334678999999999 699999999988754 


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..++++||+++|+|.+++.... .+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||+++.
T Consensus        82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARL  158 (303)
T ss_pred             CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEcccccccc
Confidence            4679999999999999998754 58899999999999999999999999999999999999   6678899999999987


Q ss_pred             ccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          180 FEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       180 ~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......          ....+||.+.+ ..++.++|+||+|++++ +.++             +...+-......++...
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~-el~t-------------~g~~p~~~~~~~~~~~~  223 (303)
T cd05110         159 LEGDEKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIW-ELMT-------------FGGKPYDGIPTREIPDL  223 (303)
T ss_pred             ccCcccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHH-HHHh-------------CCCCCCCCCCHHHHHHH
Confidence            643211          12237887754 56788999999965543 2221             00000001122223332


Q ss_pred             HHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          250 LTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       250 l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +..-.     ...+..-...+.++...+++.|+++.+.+..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~  266 (303)
T cd05110         224 LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS  266 (303)
T ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            22211     112223334455566678888999988776543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.96  E-value=2.6e-28  Score=224.61  Aligned_cols=182  Identities=22%  Similarity=0.399  Sum_probs=153.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||++++..+++.||+|.+......  ......+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS--PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIV   77 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC--hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEE
Confidence            589999999999999999999999999999998754322  23345688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||+++++|.+++....  .+++..+..++.|++.|+.|||+++++|+||+|+||++   +.++.++|+|||++......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNST  154 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcc
Confidence            99999999999987643  47899999999999999999999999999999999999   67789999999999866442


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..        ....+||.+.+ ..++.++|+|++|+.++
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~  192 (256)
T cd08218         155 VELARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLY  192 (256)
T ss_pred             hhhhhhccCCccccCHHHhCC-CCCCCccchhHHHHHHH
Confidence            21        12237887765 45778899999965554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1e-27  Score=227.76  Aligned_cols=184  Identities=25%  Similarity=0.341  Sum_probs=155.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++.+ +||||+++++.+......|+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK-RNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCL   78 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch-HHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEE
Confidence            37999999999999999999999999999999997654332 23455688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          105 VMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ||||+.+++|.+++...  ..+++..++.++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++.....
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhcccc
Confidence            99999999999998764  458999999999999999999999999999999999999   6778999999999876532


Q ss_pred             cCC-------------------------------------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG-------------------------------------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~-------------------------------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...                                     ....+||.+.+. .++.++|+||+|++++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Di~slG~ll~  223 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD-GHGSAVDWWTLGILLY  223 (316)
T ss_pred             cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC-CCCchHHHHHHHHHHH
Confidence            110                                     112378888763 5788999999965543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.96  E-value=3.3e-28  Score=233.07  Aligned_cols=257  Identities=19%  Similarity=0.221  Sum_probs=184.1

Q ss_pred             cccceee-eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh----------hHHHHHHHHHHHHHhcCCCCCeee
Q 042392           23 VMLHYSF-GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA----------ENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        23 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      +..+|.. .+.||+|+||.||+|.+..+++.||||++.........          .....+.+|+.+++.+ +||||++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~   84 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG   84 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence            5567764 57799999999999999999999999998654322100          0112467899999999 6999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      +++++......|+||||++ |+|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl  160 (335)
T PTZ00024         85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI  160 (335)
T ss_pred             eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence            9999999999999999997 4999999887889999999999999999999999999999999999999   67889999


Q ss_pred             EecCCccccccc--------------C--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------Chhh
Q 042392          172 TDFGSALLFEEE--------------G--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEE  222 (436)
Q Consensus       172 ~DFG~a~~~~~~--------------~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~  222 (436)
                      +|||++......              .        .....+||.+.+...++.++|+||+|+++ .+.+       ....
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~el~tg~~p~~~~~~  239 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIF-AELLTGKPLFPGENE  239 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            999999766410              0        01123788887666678899999995544 3332       2233


Q ss_pred             HHHHHHHhhhhCCCCCCccC-HHHHH----------HHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLS-YDELR----------AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~-~~eL~----------~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...+..++..+..+...... ...+.          ..+.......+.+..+.+.++++.+++.|++.++.+.+
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            34444444443332221000 00000          00111112334445566666777788888888877753

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=1.1e-27  Score=229.05  Aligned_cols=183  Identities=22%  Similarity=0.310  Sum_probs=151.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCC--CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----C
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENST--NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----E   99 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~   99 (436)
                      +|++.+.||+|+||.||+|.+..+  +..||+|.+......  ......+.+|+.+++.+.+||||+++++....    .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~   78 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK--KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF   78 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence            589999999999999999999888  899999998643222  22345678899999999679999999986432    2


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+|++++|+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+||++   +.++.++|+|||+|..
T Consensus        79 ~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          79 NELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARG  154 (332)
T ss_pred             CcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCcee
Confidence            45899999996 5999999887889999999999999999999999999999999999999   6788999999999986


Q ss_pred             ccccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +.....            ....+||.+.+...++.++|+||+|+++.
T Consensus       155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~  201 (332)
T cd07857         155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILA  201 (332)
T ss_pred             cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHH
Confidence            543211            11238998876566888999999966553

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.96  E-value=2.5e-28  Score=227.58  Aligned_cols=240  Identities=25%  Similarity=0.381  Sum_probs=180.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|.+.+.||+|+||.||+|.+..++..||+|++....... ......+.+|+.+++.+.+||||+++++++...+.+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-hHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence            47999999999999999999999999999999987643322 23346788999999999449999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|.+++.+.+.+++..++.++.|++.||.|||+.|++|+||+|+||++   +.++.++|+|||++.......
T Consensus        80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCcc
Confidence            99999999999999988889999999999999999999999999999999999999   678899999999998765432


Q ss_pred             C----------------------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC
Q 042392          185 G----------------------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD  236 (436)
Q Consensus       185 ~----------------------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~  236 (436)
                      .                            ....+||...+ ..++.++|+|++|+.++ +.++..              .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~-~l~~g~--------------~  220 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIY-QMLTGK--------------P  220 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHH-HHHhCC--------------C
Confidence            1                            11127777665 45778999999965443 322110              0


Q ss_pred             CCCcc-CHHHHHHHHH---hcCCCCCHHHHHHHHHHHcCCCCCcccH----HHHHH
Q 042392          237 KNGTL-SYDELRAGLT---KVGSMLTEFDVKQLMEAADMDGNGAIDY----TEFTA  284 (436)
Q Consensus       237 ~~g~i-~~~eL~~~l~---~~~~~~s~~~i~~l~~~~d~d~~g~i~~----~EF~~  284 (436)
                      +-... ....+.....   .+....+..-.+.+.++++.+++.|++.    .+.+.
T Consensus       221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         221 PFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             CCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            00000 1111111111   1222334444555666778888889988    66653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.96  E-value=1.5e-27  Score=219.73  Aligned_cols=174  Identities=21%  Similarity=0.263  Sum_probs=145.0

Q ss_pred             eeecccCCeEEEEEEECC-CC--ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           31 RMLGRGRFGVTYLCTENS-TN--MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~-~~--~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      +.||+|++|.||+|.+.. .+  ..||||.+......   .....+.+|+.+++.+ +||||+++++++.. ..+++|||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTE   75 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEE
Confidence            468999999999999865 33  36999998765432   4456788999999999 69999999999988 88999999


Q ss_pred             ccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          108 LCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      |+++++|.+++....  .+++..++.++.|++.||.|||+.+++||||||+||++   +.++.+||+|||++..+.....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~~~~  152 (257)
T cd05040          76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQNED  152 (257)
T ss_pred             ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEecccccccccccccc
Confidence            999999999998764  58999999999999999999999999999999999999   6778999999999987644211


Q ss_pred             -----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 -----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 -----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                                 ....+||.+.+ ..++.++|+||+|+++
T Consensus       153 ~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l  190 (257)
T cd05040         153 HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTL  190 (257)
T ss_pred             ceecccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHH
Confidence                       11237776654 4678899999995544

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.96  E-value=3.1e-28  Score=226.84  Aligned_cols=238  Identities=21%  Similarity=0.219  Sum_probs=176.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .+.|+..+.||+|+||.||+|.+..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceE
Confidence            3568888999999999999999999999999998864432   22345788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||+++++|.+++.. +.+++..++.++.|++.|+.|||+.+++|+||+|+||++   +.++.++|+|||++..+...
T Consensus        79 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06642          79 IIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCc
Confidence            99999999999988854 568999999999999999999999999999999999999   67789999999999876542


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh---
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK---  252 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~---  252 (436)
                      ..        ....+||.+.+ ..++.++|+||+|+.++ +.++...      .|.        .....+....+..   
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~-el~tg~~------p~~--------~~~~~~~~~~~~~~~~  218 (277)
T cd06642         155 QIKRNTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAI-ELAKGEP------PNS--------DLHPMRVLFLIPKNSP  218 (277)
T ss_pred             chhhhcccCcccccCHHHhCc-CCCchhhhHHHHHHHHH-HHHhCCC------CCc--------ccchhhHHhhhhcCCC
Confidence            21        11237887765 46788999999955543 3321110      000        0000111111111   


Q ss_pred             --cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 --VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 --~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        +....+..-.+.+.+++..+++.|.++.+.+.+
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         219 PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence              111122333344555667889999999998875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=4.8e-28  Score=223.71  Aligned_cols=178  Identities=13%  Similarity=0.106  Sum_probs=141.6

Q ss_pred             eeecccCCeEEEEEEECC------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           31 RMLGRGRFGVTYLCTENS------------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~------------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      +.||+|+||.||+|+...            ....+|+|++....    ......+.+|+.+++.+ +||||+++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH----RDISLAFFETASMMRQV-SHKHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh----hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            468999999999998532            23358888865432    23345678899999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC----CCCcEEEEe
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD----DNALLKVTD  173 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~----~~~~~kl~D  173 (436)
                      ....++||||+++|+|..++... ..+++..++.++.||+.||.|||+.+|+||||||+|||+....    ....++++|
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            88999999999999998888754 4689999999999999999999999999999999999994321    112389999


Q ss_pred             cCCcccccccCC----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||++........    ....+||.+.....++.++|+||+|+.+
T Consensus       156 ~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  199 (262)
T cd05077         156 PGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTL  199 (262)
T ss_pred             CCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence            999876643322    2234899887556788899999996544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.6e-28  Score=223.64  Aligned_cols=183  Identities=26%  Similarity=0.347  Sum_probs=152.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++.....     ....+.+|+.+++.+.+||||+++++++....  
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP   78 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence            34789999999999999999999998999999999875432     23568899999999866999999999997644  


Q ss_pred             ----eEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          101 ----AVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       101 ----~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                          .+|+||||+++++|.+++...    ..+++..++.++.|++.||.|||+.+++|+||+|+||++   +.++.++|+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~  155 (275)
T cd06608          79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLV  155 (275)
T ss_pred             CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEEC
Confidence                489999999999999988753    468999999999999999999999999999999999999   677899999


Q ss_pred             ecCCcccccccCCC--------CCCChHHHHHH----HHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGGE--------ASDDTSVILRM----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~~--------~~~~pe~~~~~----~~~~~~~d~~s~~~~~  213 (436)
                      |||++.........        ...+||.+...    ..++.++|+|++|+++
T Consensus       156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il  208 (275)
T cd06608         156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITA  208 (275)
T ss_pred             CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHH
Confidence            99998765432211        12388887542    3467789999995544

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=1.2e-27  Score=222.02  Aligned_cols=176  Identities=20%  Similarity=0.205  Sum_probs=141.2

Q ss_pred             eeecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +.||+|+||.||+|...  .++..+|+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|+||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~   76 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEF   76 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEEC
Confidence            36899999999999864  3567899998765432   22345688899999999 699999999999999999999999


Q ss_pred             cCCCChHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          109 CQGGDLFDRIIAKG-----YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       109 ~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +++|+|.+++....     ..+...+..++.|++.|+.|||+.+++||||||+||++   +.++.++|+|||++......
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~  153 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNKYKE  153 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccccCc
Confidence            99999999997532     35667788999999999999999999999999999999   67789999999999754322


Q ss_pred             CC----------CCCCChHHHHHHH------HHHHhhhhhhHHHHH
Q 042392          184 GG----------EASDDTSVILRMK------QFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~----------~~~~~pe~~~~~~------~~~~~~d~~s~~~~~  213 (436)
                      ..          ....+||.+.+..      .++.++|+||+|+.+
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l  199 (269)
T cd05087         154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI  199 (269)
T ss_pred             ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH
Confidence            11          1133888876421      357789999995544

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=9.4e-28  Score=230.51  Aligned_cols=185  Identities=21%  Similarity=0.285  Sum_probs=153.2

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-  100 (436)
                      .+.++|++.+.||+|+||.||+|.+..++..||||.+......  ......+.+|+.+++.+ +||||+++++++.... 
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   88 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS--ELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLS   88 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcc
Confidence            4678899999999999999999999999999999998653221  23345678999999999 6999999999987653 


Q ss_pred             -----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          101 -----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       101 -----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                           .+++||||+ +++|..++.. ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.++|+|||
T Consensus        89 ~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg  163 (343)
T cd07880          89 LDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG  163 (343)
T ss_pred             ccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecc
Confidence                 468999999 6699887764 569999999999999999999999999999999999999   677899999999


Q ss_pred             CcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          176 SALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       176 ~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ++.........     ...+||.+.+...++.++|+|++|+.++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~  207 (343)
T cd07880         164 LARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMA  207 (343)
T ss_pred             cccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            99876443221     1237898876556788999999965543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.96  E-value=1.4e-27  Score=222.94  Aligned_cols=182  Identities=20%  Similarity=0.262  Sum_probs=150.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+|++.+.||+|+||.||+|...     .++..+|+|.+....    ......+.+|+++++.+ +||||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   78 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTVL-QHQHIVRFYGVCTE   78 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC----HHHHHHHHHHHHHHhcC-CCCCCceEEEEEec
Confidence            357889999999999999999743     356789999876443    23455788999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG---------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR  163 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~  163 (436)
                      ....|++|||+++++|.+++...+               .+++..+..++.|++.|+.|||+.|++||||||+||++   
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---  155 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---  155 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---
Confidence            999999999999999999997653               37889999999999999999999999999999999999   


Q ss_pred             CCCCcEEEEecCCcccccccC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          164 DDNALLKVTDFGSALLFEEEG----------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       164 ~~~~~~kl~DFG~a~~~~~~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +.++.++|+|||++.......          .....+||.+.+ ..++.++|+||+|+.++
T Consensus       156 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~  215 (280)
T cd05092         156 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLW  215 (280)
T ss_pred             cCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHH
Confidence            677899999999987553211          112337887765 45788999999955443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2e-27  Score=221.34  Aligned_cols=181  Identities=24%  Similarity=0.380  Sum_probs=153.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeecCCeEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~  103 (436)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+.....   ......+.+|+.+++.+.  .|||++++++++.....+|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~   78 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW   78 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence            48889999999999999999999999999999865432   223456788999999984  4999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+||||+|+||++   +..+.++|+|||++......
T Consensus        79 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          79 IIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             EEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCC
Confidence            99999999999998865 478999999999999999999999999999999999999   67889999999999876543


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ...+||.+.+...++.++|+|++|+++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l  192 (277)
T cd06917         155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITI  192 (277)
T ss_pred             ccccccccCCcceeCHHHhccCCccccchhHHHHHHHH
Confidence            221        122899887656678899999995544

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-30  Score=265.44  Aligned_cols=204  Identities=24%  Similarity=0.350  Sum_probs=172.8

Q ss_pred             ccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      +.+...++.-+|+-...||.|.||.||.|.+..||...|+|.+..+...  ......+.+|+.++..+ +|||+|++|++
T Consensus      1226 la~~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~l-nHpNlV~YyGV 1302 (1509)
T KOG4645|consen 1226 LASSLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGL-NHPNLVRYYGV 1302 (1509)
T ss_pred             HHHHhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhc-cCccccccCce
Confidence            3344567778899999999999999999999999999999998877654  23455688999999999 79999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      -..+..+||.||||.+|+|.+++...+..++...+.+..|++.|+.|||++|||||||||+||++   +.+|.+|++|||
T Consensus      1303 EvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1303 EVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFG 1379 (1509)
T ss_pred             eecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeeccc
Confidence            99999999999999999999999887778899999999999999999999999999999999999   788999999999


Q ss_pred             CcccccccCCC------------CCCChHHHHHHH--HHHHhhhhhhHHHHHHHhcC-ChhhHHHH
Q 042392          176 SALLFEEEGGE------------ASDDTSVILRMK--QFRRMSKLKKLTVKVIVEYL-PGEETQAL  226 (436)
Q Consensus       176 ~a~~~~~~~~~------------~~~~pe~~~~~~--~~~~~~d~~s~~~~~~~~~l-~~e~~~~l  226 (436)
                      .|..+......            ...|||++.+.+  .-..+.||||+ +|++.++. +...+.++
T Consensus      1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWsl-GCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSL-GCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcc-cceEEEeecCCCchhhc
Confidence            99988765321            222999999865  34468999999 66766665 44444433

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=9.4e-29  Score=240.96  Aligned_cols=185  Identities=21%  Similarity=0.322  Sum_probs=159.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTN---MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...+|.++||.|.||.|++|+.+..|   ..||||.++.....   .....++.|..||-++ +||||++|.++......
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte---kqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE---KQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH---HHHhhhhhhhhhcccC-CCCcEEEEEEEEecCce
Confidence            34678999999999999999987655   57999999766543   3556799999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +.||+|||++|+|..+|+.. +.++.-+..-+++.|+.|+.||-..++|||||..+|||+   +.+-.+|++|||+++.+
T Consensus       705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeec
Confidence            99999999999999999875 568889999999999999999999999999999999999   88899999999999988


Q ss_pred             cccCCCCC-----------CChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          181 EEEGGEAS-----------DDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       181 ~~~~~~~~-----------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .++.....           .|||.+.. +.|+.+||+||+|+ ++.+-+
T Consensus       782 edd~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGI-VmWEVm  828 (996)
T KOG0196|consen  782 EDDPEAAYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGI-VMWEVM  828 (996)
T ss_pred             ccCCCccccccCCccceeecChhHhhh-cccCchhhccccce-EEEEec
Confidence            65542221           29999876 67999999999944 444433

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=1.1e-27  Score=223.73  Aligned_cols=254  Identities=20%  Similarity=0.261  Sum_probs=179.1

Q ss_pred             cceeeeeeecccCCeEEEEEEEC----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTEN----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--   98 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--   98 (436)
                      +.|++.+.||+|+||.||+|...    .++..||+|++......   .....+.+|+.+++.+ +||||+++++++..  
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~   79 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTL-DHENIVKYKGVCEKPG   79 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhC-CCCChheEEeeeecCC
Confidence            46888999999999999999864    34889999998755432   2356789999999999 69999999999877  


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ....++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++
T Consensus        80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~  156 (284)
T cd05038          80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLA  156 (284)
T ss_pred             CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccccc
Confidence            557999999999999999997754 58999999999999999999999999999999999999   67789999999999


Q ss_pred             ccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhh-HHHHHHHhhhhCCCCCCccCHHH
Q 042392          178 LLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEE-TQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       178 ~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~-~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      ........           ....+||.+.+ ..++.++|+||+ ++++.+.++... .......+..+.....+......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~sl-G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd05038         157 KVLPEDKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSF-GVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR  234 (284)
T ss_pred             cccccCCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHH-hhhhheeeccCCCcccccchhccccccccccccHHH
Confidence            87753211           11237887765 367889999999 455555542110 00000000000001111122333


Q ss_pred             HHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          246 LRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       246 L~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +...+..-.     ...+.+-.+.+.+++..+++.|+++.|.+..+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~  281 (284)
T cd05038         235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD  281 (284)
T ss_pred             HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence            333333211     111223334455566778888888888876653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.7e-27  Score=219.67  Aligned_cols=178  Identities=27%  Similarity=0.346  Sum_probs=145.5

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|.+..+++.||+|++.+..... ......+..|..++....+||||+++++++...+.+|+|+||++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            57999999999999999999999999986543221 12223345555555444379999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----C
Q 042392          111 GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----E  186 (436)
Q Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----~  186 (436)
                      +++|.+++...+.+++..+..++.|++.||.|||+.+++||||+|.||++   +.++.++|+|||++........    .
T Consensus        81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (260)
T cd05611          81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLENKKFVGTP  157 (260)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccccccCCCCc
Confidence            99999999888889999999999999999999999999999999999999   6778999999999876543211    1


Q ss_pred             CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          187 ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       187 ~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...+||.+.+. .++.++|+|++|+.+
T Consensus       158 ~y~~pe~~~~~-~~~~~~Dv~slG~il  183 (260)
T cd05611         158 DYLAPETILGV-GDDKMSDWWSLGCVI  183 (260)
T ss_pred             CccChhhhcCC-CCcchhhhHHHHHHH
Confidence            22388887764 478899999995544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=1.2e-27  Score=224.51  Aligned_cols=184  Identities=20%  Similarity=0.292  Sum_probs=151.5

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      ...++|.+.+.||+|+||.||+|.+..+++.+|+|++....     .....+.+|+.+++.+.+||||+++++++...  
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~   93 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK   93 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence            45688999999999999999999999999999999986432     22345778999999986799999999998653  


Q ss_pred             ---CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          100 ---TAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       100 ---~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                         ..+|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.+++||||||+||++   +.++.+||+
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~  170 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLV  170 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEe
Confidence               358999999999999998863    3468999999999999999999999999999999999999   677889999


Q ss_pred             ecCCcccccccCC--------CCCCChHHHHHHH----HHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGG--------EASDDTSVILRMK----QFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~--------~~~~~pe~~~~~~----~~~~~~d~~s~~~~~  213 (436)
                      |||++........        ....+||.+....    .++.++|+||+|+.+
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~  223 (291)
T cd06639         171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITA  223 (291)
T ss_pred             ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHH
Confidence            9999886543211        1123788875432    357899999995544

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=2.6e-27  Score=220.98  Aligned_cols=243  Identities=13%  Similarity=0.090  Sum_probs=174.9

Q ss_pred             ccceeeeeeecccCCeEEEEEEECC----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENS----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-   98 (436)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++.. 
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~   80 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS---EIQVTLLLQESCLLYGL-SHQNILPILHVCIED   80 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecC
Confidence            4679999999999999999999875    368899998764321   33456688999999999 69999999998665 


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK--------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      ....+++++|+++++|..++...        ..+++..+..++.|++.||.|||+.+++||||||+||++   +.++.+|
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~k  157 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVK  157 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEE
Confidence            56789999999999999998764        348899999999999999999999999999999999999   6778999


Q ss_pred             EEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCc
Q 042392          171 VTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       171 l~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      |+|||+++.+.....          ....+||.+.+ ..++.++|+||+|+.+ .+.++.             ...+-..
T Consensus       158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l-~el~~~-------------g~~p~~~  222 (280)
T cd05043         158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLL-WELMTL-------------GQTPYVE  222 (280)
T ss_pred             ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHH-HHHhcC-------------CCCCcCc
Confidence            999999986533211          11238887765 4578899999995544 333210             0000001


Q ss_pred             cCHHHHHHHHHhc-C----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          241 LSYDELRAGLTKV-G----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       241 i~~~eL~~~l~~~-~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ....++...+..- .    ...+.+-.+.+.++...+.+.|.++.+.+..+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  275 (280)
T cd05043         223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTD  275 (280)
T ss_pred             CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            1222233222221 0    1112222333444556678888999888876543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=4.7e-28  Score=228.88  Aligned_cols=183  Identities=23%  Similarity=0.334  Sum_probs=154.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++.+ +||||+++++.+..++.+|+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCM   78 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEE
Confidence            36899999999999999999999999999999987653322 23345678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc-
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE-  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-  183 (436)
                      ||||++|++|.+++...+.+++..+..++.|++.|+.|||+.+++||||||+||++   +..+.++|+|||+++..... 
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~  155 (305)
T cd05609          79 VMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSL  155 (305)
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCc
Confidence            99999999999999888889999999999999999999999999999999999999   77889999999998642100 


Q ss_pred             ----------------------CCCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 ----------------------GGEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ----------------------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                                            ......+||.+.+ ..++.++|+||+|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl  206 (305)
T cd05609         156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIIL  206 (305)
T ss_pred             cccccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHH
Confidence                                  0011227887665 4678899999995544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=3.6e-27  Score=216.14  Aligned_cols=233  Identities=19%  Similarity=0.246  Sum_probs=169.0

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      ++||+|+||.||+|... ++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++......++||||++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   75 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP---QELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVP   75 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCC---HHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCC
Confidence            46899999999999864 688999998865432   23344688999999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          111 GGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       111 ~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      +++|.+++... ..+++..+..++.|++.||.|+|+.|++||||||+||++   +.++.+||+|||++........    
T Consensus        76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (250)
T cd05085          76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSG  152 (250)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCC
Confidence            99999998764 357899999999999999999999999999999999999   6788999999999975432211    


Q ss_pred             -----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCC
Q 042392          186 -----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGS  255 (436)
Q Consensus       186 -----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~  255 (436)
                           ....+||.+.+ ..++.++|+||+|+.++ +.++.             ...+-......+....+..     ...
T Consensus       153 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~-~~~~~-------------g~~p~~~~~~~~~~~~~~~~~~~~~~~  217 (250)
T cd05085         153 LKQIPIKWTAPEALNY-GRYSSESDVWSYGILLW-ETFSL-------------GVCPYPGMTNQQAREQVEKGYRMSCPQ  217 (250)
T ss_pred             CCCCcccccCHHHhcc-CCCCchhHHHHHHHHHH-HHhcC-------------CCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence                 11237887764 46788999999965543 22210             0000000111111111111     111


Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+..-.+.+.+.+..+++.|+++.|+...+
T Consensus       218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l  248 (250)
T cd05085         218 KCPDDVYKVMQRCWDYKPENRPKFSELQKEL  248 (250)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence            2233334445556667889999999987654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=1.2e-27  Score=219.93  Aligned_cols=179  Identities=22%  Similarity=0.309  Sum_probs=154.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|.+..++..||+|.+....      ....+.+|+.+++.+ +||||+++++++.....+|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~   74 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLW   74 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEE
Confidence            357999999999999999999998889999999986432      156788999999999 7999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +++||+++++|.+++... ..+++..++.++.|++.|+.|||..+++||||+|.||++   +.++.++|+|||++.....
T Consensus        75 l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          75 IVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             EEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhccc
Confidence            999999999999999764 458999999999999999999999999999999999999   6788999999999987654


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....        ...+||.+.+ ..++.++|+|++|+.+
T Consensus       152 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il  189 (256)
T cd06612         152 TMAKRNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITA  189 (256)
T ss_pred             CccccccccCCccccCHHHHhc-CCCCchhhHHHHHHHH
Confidence            3311        1238888765 4678899999995544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=227.58  Aligned_cols=194  Identities=24%  Similarity=0.353  Sum_probs=162.2

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-C----Ceeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-P----NIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~----niv~~~~   94 (436)
                      ...+..+|.+...+|+|+||.|-.|.+..++..||||+++.-.     ...+..+-|+++|.++..+ |    -+|++.+
T Consensus        84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-----KYREAALIEIEVLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence            3446789999999999999999999999999999999986542     3445677899999999422 2    4788899


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC--------
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD--------  164 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~--------  164 (436)
                      +|.-.++++||+|.+ |.++++++...+  +++...++.+.+|+++++.|||+.+++|-||||+|||+.+..        
T Consensus       159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC
Confidence            999999999999999 569999998865  488999999999999999999999999999999999986421        


Q ss_pred             ---------CCCcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChh
Q 042392          165 ---------DNALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGE  221 (436)
Q Consensus       165 ---------~~~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e  221 (436)
                               .+..|+++|||.|+.-.+.....     ..|||+++++ .|+.++|+||+ +|++.+.+..+
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgL-GwS~pCDvWSi-GCIL~ElytG~  306 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGL-GWSQPCDVWSI-GCILVELYTGE  306 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheecc-CcCCccCceee-eeEEEEeeccc
Confidence                     13468999999999876654321     2299999996 69999999999 78887777554

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.1e-29  Score=228.23  Aligned_cols=192  Identities=25%  Similarity=0.323  Sum_probs=162.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-..+|.++.+||+|+||.|.+|..+.|.+.||||++++..... ....+--..|-.+|....+-|.+++++.+|++.+
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL~~kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD  423 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence            445567999999999999999999999999999999998875543 2334445667778877767899999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|.||||+.||+|.-.++.-+++.++.+..++..|+-||-|||++||+.||||..|||+   +..|++||+|||+++.-
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKEN  500 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999   88999999999999864


Q ss_pred             cccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          181 EEEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       181 ~~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .-...+.        ..|||++.. ++|+.++|.|++|+. +.+++
T Consensus       501 i~~~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVL-LyEml  544 (683)
T KOG0696|consen  501 IFDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVL-LYEML  544 (683)
T ss_pred             ccCCcceeeecCCCcccccceEEe-cccccchhHHHHHHH-HHHHH
Confidence            3322221        128887765 789999999999554 44443

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=2.3e-27  Score=218.23  Aligned_cols=179  Identities=26%  Similarity=0.357  Sum_probs=151.2

Q ss_pred             eeeeeeecccCCeEEEEEEECCCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTN----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +++.+.||.|+||.||+|.+..++    ..||+|++.....   ......+.+|+.+++.+ +||||+++++++...+..
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   76 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPL   76 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCee
Confidence            357789999999999999998766    8999999865432   12456788999999999 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |++|||+++++|.+++.....  +++..+..++.|++.|+.|||+.+++||||||+||++   +.++.++|+|||++...
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~  153 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDL  153 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceec
Confidence            999999999999999987554  8999999999999999999999999999999999999   77789999999999876


Q ss_pred             cccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....         ....+||.+. ...++.++|+|++|+.+
T Consensus       154 ~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~i~  194 (258)
T smart00219      154 YDDDYYKKKGGKLPIRWMAPESLK-DGKFTSKSDVWSFGVLL  194 (258)
T ss_pred             ccccccccccCCCcccccChHHhc-cCCCCcchhHHHHHHHH
Confidence            54311         1223788774 35678899999996554

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-27  Score=223.34  Aligned_cols=250  Identities=23%  Similarity=0.275  Sum_probs=180.2

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |++.+.||.|++|.||+|.++.+|..||+|++......  ......+.+|+.+++.+ +||||+++++++......|++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVF   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEE
Confidence            67889999999999999999999999999998754322  12234577899999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          107 ELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||++ ++|.+++....  .+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.++|+|||++.......
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCc
Confidence            9996 59999998765  68999999999999999999999999999999999999   668899999999997653221


Q ss_pred             C--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc----cCHHH
Q 042392          185 G--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT----LSYDE  245 (436)
Q Consensus       185 ~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~----i~~~e  245 (436)
                      .        ....+||.+.+...++..+|+||+|+.+ .+.+       ..+....+..++..........    ....+
T Consensus       154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd07835         154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIF-AEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD  232 (283)
T ss_pred             cccCccccccCCCCCceeecCcccCcHHHHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchh
Confidence            1        1123788877655678899999996544 3322       1223333334433322221110    11111


Q ss_pred             HHHHHH--------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          246 LRAGLT--------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       246 L~~~l~--------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      +...+.        .....++..-.+.+.+++..++..|++..|.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            111111        111233444455666677778888888777653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.96  E-value=6.6e-28  Score=222.69  Aligned_cols=182  Identities=26%  Similarity=0.388  Sum_probs=152.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CCeEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ETAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~~~  103 (436)
                      +|++.+.||.|+||.||+|.+..++..||+|.+......  ......+.+|+.+++.+ +||||+++++++..  ...+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT--EKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC--HHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEE
Confidence            589999999999999999999999999999998765432  23456688999999999 69999999997754  45689


Q ss_pred             EEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-----HcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          104 VVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCH-----SMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH-----~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ++|||+++++|.+++...    .++++..++.++.||+.||.|||     +.+++|+||+|+||++   +.++.+||+||
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~  154 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDF  154 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEecc
Confidence            999999999999998763    56899999999999999999999     8999999999999999   67789999999


Q ss_pred             CCcccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          175 GSALLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       175 G~a~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |++........        ....+||.+.+ ..++.++|+|++|++++
T Consensus       155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~  201 (265)
T cd08217         155 GLAKILGHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIY  201 (265)
T ss_pred             cccccccCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHH
Confidence            99987654332        11227887765 44778899999965553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=2.5e-27  Score=218.97  Aligned_cols=183  Identities=26%  Similarity=0.388  Sum_probs=156.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+......  ......+.+|+.+++.+ +||||+++++++.....+++|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIF   77 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEE
Confidence            689999999999999999999889999999998766433  24567789999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      +||+++++|.+++.....+++..+..++.|++.|+.|||+.+|+|+||+|+||++   +.++.+||+|||++........
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCCCCC
Confidence            9999999999999887778999999999999999999999999999999999999   6788999999999987644221


Q ss_pred             ------------CCCCChHHHHHHH--HHHHhhhhhhHHHHHH
Q 042392          186 ------------EASDDTSVILRMK--QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ------------~~~~~pe~~~~~~--~~~~~~d~~s~~~~~~  214 (436)
                                  ....+||.+.+..  .++.++|+|++|+.++
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~  197 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL  197 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence                        1122788776532  2678899999955443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=1.4e-27  Score=222.97  Aligned_cols=185  Identities=24%  Similarity=0.323  Sum_probs=151.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ...+.|++.+.||.|+||.||+|.+..+++.||+|++....     .....+.+|+.+++.+.+||||+++++++..   
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   87 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP   87 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence            34578999999999999999999999999999999986542     2334678899999998679999999999853   


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           99 ---ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        99 ---~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                         ...+|++|||+++|+|.+++...  ..+++..+..++.||+.|+.|||+.+|+||||+|+||++   +.++.++|+|
T Consensus        88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~d  164 (282)
T cd06636          88 PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVD  164 (282)
T ss_pred             cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEee
Confidence               46789999999999999998764  347888899999999999999999999999999999999   6778899999


Q ss_pred             cCCcccccccCC--------CCCCChHHHHH----HHHHHHhhhhhhHHHHHH
Q 042392          174 FGSALLFEEEGG--------EASDDTSVILR----MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       174 FG~a~~~~~~~~--------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~  214 (436)
                      ||++........        ....+||.+..    ...++.++|+||+|++++
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~  217 (282)
T cd06636         165 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAI  217 (282)
T ss_pred             CcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHH
Confidence            999876543211        11238887752    235777899999965543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.96  E-value=1.3e-27  Score=221.46  Aligned_cols=178  Identities=21%  Similarity=0.340  Sum_probs=147.2

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      ...||+|+||.||+|.+..++..||+|.+....    ......+.+|+.+++.+ +||||+++++++...+.+|+|+||+
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecC
Confidence            457999999999999999999999999886543    23345788999999999 6999999999999999999999999


Q ss_pred             CCCChHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-
Q 042392          110 QGGDLFDRIIAK-GYY--SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-  185 (436)
Q Consensus       110 ~~g~L~~~l~~~-~~~--~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-  185 (436)
                      ++++|.+++... .++  ++..+..++.||+.|+.|||+.||+||||||+||++.  ...+.++|+|||++........ 
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~~  165 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINPC  165 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCCc
Confidence            999999999864 445  7888999999999999999999999999999999993  2256899999999876533211 


Q ss_pred             -------CCCCChHHHHHH-HHHHHhhhhhhHHHHHH
Q 042392          186 -------EASDDTSVILRM-KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 -------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~~  214 (436)
                             ....+||.+.+. ..++.++|+||+|+.++
T Consensus       166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~  202 (268)
T cd06624         166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIV  202 (268)
T ss_pred             cccCCCCccccChhhhccccccCCchhhhHHHHHHHH
Confidence                   122388887653 34778999999966543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=2.7e-27  Score=217.66  Aligned_cols=177  Identities=21%  Similarity=0.281  Sum_probs=146.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ..+|++.+.||+|+||.||+|.  .+++.||+|.+....      ....+.+|+.+++.+ +||||+++++++... ..|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~   74 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV------TAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLY   74 (254)
T ss_pred             HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc------hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcE
Confidence            4679999999999999999987  468889999885432      234678999999999 699999999998654 479


Q ss_pred             EEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +||||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++....
T Consensus        75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecc
Confidence            9999999999999998654  47899999999999999999999999999999999999   677899999999987654


Q ss_pred             ccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....     ...+||.+.+ ..++.++|+||+|+++.
T Consensus       152 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~  188 (254)
T cd05083         152 MGVDNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLW  188 (254)
T ss_pred             ccCCCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHH
Confidence            32111     1237887654 46788999999965543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.96  E-value=6.6e-27  Score=216.03  Aligned_cols=180  Identities=24%  Similarity=0.360  Sum_probs=156.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+......   .....+.+|+.++..+ +||||+++++++.....+|+|
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIV   77 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEE
Confidence            688999999999999999999999999999998765321   3456788999999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |||+++++|.+++.....+++..++.++.|++.|+.|||+ .+++||||+|+||++   +.++.++|+|||++.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCC
Confidence            9999999999999888889999999999999999999999 999999999999999   778899999999998765433


Q ss_pred             CCC--------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 GEA--------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ..+||.+.+ ..++.++|+|++|+.+
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il  190 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTL  190 (264)
T ss_pred             CcccceeecccccCHhhhCC-CCCCchhhHHHHHHHH
Confidence            221        227877655 4678899999995544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=3.9e-28  Score=231.20  Aligned_cols=248  Identities=19%  Similarity=0.186  Sum_probs=183.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCC----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENST----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      +.-++..++.+.||.|.||.||+|.....    .-.||||+.+.....   ...+.++.|..+|+++ +|||||+++|++
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~---d~tekflqEa~iMrnf-dHphIikLIGv~  460 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP---DDTEKFLQEASIMRNF-DHPHIIKLIGVC  460 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh---hhHHHHHHHHHHHHhC-CCcchhheeeee
Confidence            33445566678899999999999986432    346899988765443   3467899999999999 799999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      .. ..+|||||+++.|.|..+++..+ .++......++.||+.||.|||+.+.|||||..+|||+   .+..-|||+|||
T Consensus       461 ~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV---sSp~CVKLaDFG  536 (974)
T KOG4257|consen  461 VE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV---SSPQCVKLADFG  536 (974)
T ss_pred             ec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee---cCcceeeecccc
Confidence            65 57999999999999999998764 48899999999999999999999999999999999999   556679999999


Q ss_pred             CcccccccCCC-CCC--------ChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          176 SALLFEEEGGE-ASD--------DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       176 ~a~~~~~~~~~-~~~--------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      +++.+..+..- ++.        +||.+.- ++|+.+||+|.+|+|+.             +++..--++-.|.-+.+-+
T Consensus       537 LSR~~ed~~yYkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmW-------------EIl~lGvkPfqgvkNsDVI  602 (974)
T KOG4257|consen  537 LSRYLEDDAYYKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMW-------------EILSLGVKPFQGVKNSDVI  602 (974)
T ss_pred             hhhhccccchhhccccccceeecCccccch-hcccchhhHHHHHHHHH-------------HHHHhcCCccccccccceE
Confidence            99988764321 111        8888765 78999999999988864             2221111112222111111


Q ss_pred             HHHHH--hc--CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          247 RAGLT--KV--GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       247 ~~~l~--~~--~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      ...-+  ++  ..+.+..-.-.+-++.+.++..+..|.|....+....
T Consensus       603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence            11100  11  2233334455566677889999999999988776553

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=6.3e-27  Score=215.35  Aligned_cols=179  Identities=21%  Similarity=0.297  Sum_probs=150.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      .+|++.+.||+|+||.||+|.+. .+..+|+|.+......     ...+.+|+++++.+ +||||+++++++......|+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~-----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS-----EEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICL   76 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC-----HHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEE
Confidence            47899999999999999999885 4678999988654322     34578899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++++|.+++... +.+++..++.++.|++.|+.|||+.+++||||||+||++   +.++.++|+|||++......
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~  153 (256)
T cd05112          77 VFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDD  153 (256)
T ss_pred             EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccC
Confidence            99999999999998764 458999999999999999999999999999999999999   67789999999998765332


Q ss_pred             CC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..         ....+||.+.+ ..++.++|+|++|+.+.
T Consensus       154 ~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~  192 (256)
T cd05112         154 QYTSSTGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMW  192 (256)
T ss_pred             cccccCCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHH
Confidence            11         11237887765 56888999999965553

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=3.9e-27  Score=218.56  Aligned_cols=182  Identities=22%  Similarity=0.251  Sum_probs=148.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+|++.+.||+|+||.||+|.+..+   ...||||.......   ......+.+|+.+++.+ +||||+++++++.. .
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~   79 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-N   79 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-C
Confidence            35699999999999999999987544   45799998765432   23345788999999999 69999999998875 4


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..|+||||+++|+|.+++.+.. .+++..++.++.|++.||.|||+.+++||||||+||++   +..+.++|+|||++..
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~  156 (270)
T cd05056          80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRY  156 (270)
T ss_pred             CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeee
Confidence            5789999999999999998754 48999999999999999999999999999999999999   6778999999999986


Q ss_pred             ccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......         ....+||.+.+ ..++.++|+||+|+.++
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~  199 (270)
T cd05056         157 LEDESYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMW  199 (270)
T ss_pred             cccccceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHH
Confidence            543211         12237887654 46788999999965543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=3.7e-27  Score=217.68  Aligned_cols=176  Identities=28%  Similarity=0.421  Sum_probs=151.1

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||.|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++.....+|+|+||++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE-TGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchh-hhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            699999999999999999999999997654332 23456789999999999 6999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-------C
Q 042392          113 DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------G  185 (436)
Q Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------~  185 (436)
                      +|.+++.+...+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||++.......       .
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~  155 (262)
T cd05572          79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGT  155 (262)
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCC
Confidence            999999887779999999999999999999999999999999999999   678899999999998765431       1


Q ss_pred             CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....+||.+.+ ..++.++|+|++|+++.
T Consensus       156 ~~~~~PE~~~~-~~~~~~~Di~slG~il~  183 (262)
T cd05572         156 PEYVAPEIILN-KGYDFSVDYWSLGILLY  183 (262)
T ss_pred             cCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence            12237887654 45788899999965553

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.96  E-value=2.3e-27  Score=220.96  Aligned_cols=237  Identities=19%  Similarity=0.242  Sum_probs=175.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +-|++.+.||+|+||.||+|.+..++..||+|.+.....   ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEE
Confidence            447889999999999999999988999999998764432   22345688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|.+++.. +.+++..+..++.|++.|+.|||+.|++|+||+|.||++   +.++.++|+|||++..+....
T Consensus        80 v~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06641          80 IMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             EEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccch
Confidence            9999999999988864 468999999999999999999999999999999999999   677899999999987654422


Q ss_pred             C--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh----
Q 042392          185 G--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK----  252 (436)
Q Consensus       185 ~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~----  252 (436)
                      .        ....+||.+.+ ..++..+|+||+|+++ .+.+...              .+............+..    
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l-~~l~~g~--------------~p~~~~~~~~~~~~~~~~~~~  219 (277)
T cd06641         156 IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITA-IELAKGE--------------PPHSELHPMKVLFLIPKNNPP  219 (277)
T ss_pred             hhhccccCCccccChhhhcc-CCCCchhhHHHHHHHH-HHHHcCC--------------CCCCccchHHHHHHHhcCCCC
Confidence            1        11237887654 4567889999995544 3332111              00001111111111111    


Q ss_pred             -cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 -VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 -~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       +....+.+-.+-+-+.+..+++.+.++.+.+.+
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         220 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence             111223333344445567788999999998875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.3e-27  Score=228.05  Aligned_cols=184  Identities=20%  Similarity=0.318  Sum_probs=151.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++...  
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~   90 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARS   90 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh--hHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccc
Confidence            3568899999999999999999999999999999998654221  22345677899999999 699999999988643  


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                          ..+|++++++ +++|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||
T Consensus        91 ~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg  165 (345)
T cd07877          91 LEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFG  165 (345)
T ss_pred             ccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEeccc
Confidence                3478999987 6799887754 469999999999999999999999999999999999999   678899999999


Q ss_pred             CcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          176 SALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       176 ~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ++........     ....+||.+.+...++.++|+||+|+++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il  208 (345)
T cd07877         166 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM  208 (345)
T ss_pred             ccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHH
Confidence            9987543321     1223899887656678899999996554

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.96  E-value=1.6e-27  Score=220.38  Aligned_cols=182  Identities=22%  Similarity=0.284  Sum_probs=155.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|.++.+++.+|+|.+.....   ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   76 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISI   76 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEE
Confidence            368889999999999999999999999999999876542   23456788999999999 59999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ++||+++++|.+++... ..+++..+..++.|++.|+.|||+ .+++||||||+||++   +.++.++|+|||.+.....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~  153 (265)
T cd06605          77 CMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVN  153 (265)
T ss_pred             EEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHH
Confidence            99999999999999876 679999999999999999999999 999999999999999   6788999999999876643


Q ss_pred             cCC------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          183 EGG------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       183 ~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...      ....+||.+.+ ..++.++|+|++|+.++
T Consensus       154 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~  190 (265)
T cd06605         154 SLAKTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLI  190 (265)
T ss_pred             HHhhcccCChhccCHHHHcC-CCCCchhhHHHHHHHHH
Confidence            211      12237887766 47888999999955543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.96  E-value=1.6e-27  Score=228.86  Aligned_cols=182  Identities=24%  Similarity=0.312  Sum_probs=149.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      +..+|.+.+.||.|+||.||+|.+..++..||+|.+.....    .....+.+|+.+++.+ +||||+++++++...   
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~   77 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSD   77 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhc-CCCcchhhHhhhcccccc
Confidence            45789999999999999999999999999999999865542    2345678899999999 699999999877654   


Q ss_pred             -----------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392          100 -----------TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus       100 -----------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                                 ..+|+||||+++ +|.+++.. +++++..++.++.||+.||.|||+.||+||||||+||++.  ..++.
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~  153 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLV  153 (342)
T ss_pred             cccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCce
Confidence                       358999999975 99888754 4689999999999999999999999999999999999993  24567


Q ss_pred             EEEEecCCcccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          169 LKVTDFGSALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ++|+|||++........           ....+||.+.+...++.++|+||+|+.+
T Consensus       154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil  209 (342)
T cd07854         154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF  209 (342)
T ss_pred             EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence            89999999976532211           1223899887656788899999995544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=1e-27  Score=226.27  Aligned_cols=185  Identities=23%  Similarity=0.353  Sum_probs=153.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-  100 (436)
                      ...++|++.+.||+|+||.||+|.++.+++.||+|.+.......  .....+.+|+.+++.+ +||||+++++++.... 
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~   80 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--GFPITAIREIKILRQL-NHRNIVNLKEIVTDKQD   80 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--CchHHHHHHHHHHHhC-CCCCeeeeeheecCcch
Confidence            45678999999999999999999999999999999987553222  2334677899999999 6999999999887654 


Q ss_pred             ---------eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392          101 ---------AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       101 ---------~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                               .+|+|+||+++ ++...+.+. ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~k  156 (302)
T cd07864          81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIK  156 (302)
T ss_pred             hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEE
Confidence                     79999999986 787877654 358999999999999999999999999999999999999   7788999


Q ss_pred             EEecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          171 VTDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       171 l~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|||++........         ....+||.+.+...++.++|+|++|+.+
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~  208 (302)
T cd07864         157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL  208 (302)
T ss_pred             eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHH
Confidence            999999987644321         1123788887655678899999995544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.96  E-value=1.4e-27  Score=219.53  Aligned_cols=182  Identities=24%  Similarity=0.396  Sum_probs=155.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||.|+||.||+|.+..++..||+|++......  ......+.+|+++++.+ +|||++++++.+......++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS--EKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC--hHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEE
Confidence            589999999999999999999989999999998765432  24456688999999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          106 MELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +||+++++|.+++...    ..+++..+..++.|++.|+.|||+.|++|+||+|+||++   +.++.++|+|||++....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~  154 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLS  154 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeecc
Confidence            9999999999999874    569999999999999999999999999999999999999   677899999999998765


Q ss_pred             ccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....        ....+||.+.+ ..++.++|+|++|++++
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~  194 (258)
T cd08215         155 STVDLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLY  194 (258)
T ss_pred             cCcceecceeeeecccChhHhcc-CCCCccccHHHHHHHHH
Confidence            4321        11237887655 45788999999966553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-27  Score=221.56  Aligned_cols=185  Identities=25%  Similarity=0.398  Sum_probs=153.7

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--Ce
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM-KYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~  101 (436)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+...... ........+.+|+.+++.+ +||||+++++++...  ..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence            5799999999999999999999999999999988643211 1133456788999999999 699999999998764  56


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +++++||+++++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||++   +.++.++|+|||+++...
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence            89999999999999999887789999999999999999999999999999999999999   677899999999998654


Q ss_pred             ccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ...           .....+||.+.+ ..++.++|+|++|++++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~  200 (264)
T cd06653         158 TICMSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVV  200 (264)
T ss_pred             cccccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHH
Confidence            311           011227887765 45778899999955543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.3e-27  Score=217.76  Aligned_cols=182  Identities=26%  Similarity=0.367  Sum_probs=157.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|++|.||+|++..+++.||+|.+......  ......+.+|+++++.+ +|||++++++++...+.+|++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEE
Confidence            588999999999999999999989999999998766432  23456789999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|||+.||+||||+|+||++   +.++.++|+|||++........
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCcc
Confidence            9999999999999888889999999999999999999999999999999999999   6678999999999987755433


Q ss_pred             C--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 E--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .        ...+||.+.+. .++.++|+|++|+++.
T Consensus       155 ~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~~lG~~l~  190 (254)
T cd06627         155 DDASVVGTPYWMAPEVIEMS-GASTASDIWSLGCTVI  190 (254)
T ss_pred             cccccccchhhcCHhhhcCC-CCCcchhHHHHHHHHH
Confidence            1        12278877654 3778899999966553

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=1.3e-27  Score=224.40  Aligned_cols=185  Identities=24%  Similarity=0.309  Sum_probs=154.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.+.|.....||+|+||.||++.+..++..||||.+....    ......+.+|+.+++.+ +||||+++++.+...
T Consensus        17 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~   91 (292)
T cd06658          17 PGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDY-HHENVVDMYNSYLVG   91 (292)
T ss_pred             cCchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhC-CCCcHHHHHHheecC
Confidence            3445667777888999999999999999999999999986432    23345688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +..|+||||+++++|.+++.. +.+++..+..++.||+.|+.|||+.+|+||||||+||++   +.++.++|+|||++..
T Consensus        92 ~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~  167 (292)
T cd06658          92 DELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQ  167 (292)
T ss_pred             CeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhh
Confidence            999999999999999888754 468999999999999999999999999999999999999   6778999999999876


Q ss_pred             ccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......        ....+||.+.+ ..++.++|+||+|++++
T Consensus       168 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~  209 (292)
T cd06658         168 VSKEVPKRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVI  209 (292)
T ss_pred             cccccccCceeecCccccCHHHHcc-CCCCchhhHHHHHHHHH
Confidence            533221        12238887755 45788999999965554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=3e-27  Score=224.58  Aligned_cols=187  Identities=26%  Similarity=0.337  Sum_probs=154.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+...|...+.||+|+||.||+|++..++..||+|.+....... ......+.+|+.+++.+ +|||++++++++....
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   98 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-NEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREH   98 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc-hHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCC
Confidence            445556899999999999999999999999999999987553322 33445688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..|+||||++| +|.+.+.. ..++++..+..++.|++.|+.|||+.+|+||||+|+||++   +.++.++|+|||++..
T Consensus        99 ~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~  174 (317)
T cd06635          99 TAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASI  174 (317)
T ss_pred             eEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccc
Confidence            99999999975 88887755 4568999999999999999999999999999999999999   6778999999999876


Q ss_pred             ccccCCC----CCCChHHHHH--HHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGE----ASDDTSVILR--MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~----~~~~pe~~~~--~~~~~~~~d~~s~~~~~  213 (436)
                      .......    ...+||.+..  ...++.++|+||+|+.+
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil  214 (317)
T cd06635         175 ASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  214 (317)
T ss_pred             cCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHH
Confidence            5443221    2238888753  24578899999995544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.95  E-value=2.5e-27  Score=224.14  Aligned_cols=187  Identities=27%  Similarity=0.339  Sum_probs=154.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+..+|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~   88 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-NEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREH   88 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc-HHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCC
Confidence            345567999999999999999999999899999999986543322 33445688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..|+||||++| +|.+++.. ..++++..+..++.|++.||.|||+.+|+||||+|+||++   +.++.++|+|||++..
T Consensus        89 ~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~  164 (307)
T cd06607          89 TAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASL  164 (307)
T ss_pred             eEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCccee
Confidence            99999999975 88777764 4568999999999999999999999999999999999999   7788999999999976


Q ss_pred             ccccCCC----CCCChHHHHH--HHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGE----ASDDTSVILR--MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~----~~~~pe~~~~--~~~~~~~~d~~s~~~~~  213 (436)
                      .......    ...+||.+.+  ...++.++|+|++|+.+
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il  204 (307)
T cd06607         165 VSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (307)
T ss_pred             cCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHH
Confidence            6433221    2237887643  24577899999996544

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=9.7e-28  Score=229.35  Aligned_cols=182  Identities=24%  Similarity=0.327  Sum_probs=155.1

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-----
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-----  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-----  100 (436)
                      +|++.+.||+|+||.||+|++..++..||||.+......  ......+.+|+.+++.+ +||||+++++++....     
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~   77 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD--LIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFN   77 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc--chhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCccccc
Confidence            689999999999999999999889999999998754321  23445688999999999 6999999999988775     


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+++ +|.+++.+..++++..++.++.||+.||.|||+.||+||||||.||++   +.++.++|+|||++...
T Consensus        78 ~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          78 DVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGV  153 (330)
T ss_pred             ceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEee
Confidence            79999999975 899999877789999999999999999999999999999999999999   67789999999999877


Q ss_pred             cccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....           ....+||.+.+...++.++|+||+|+.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~  198 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFA  198 (330)
T ss_pred             cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHH
Confidence            55431           01238888877557888999999965543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=9.1e-28  Score=225.00  Aligned_cols=183  Identities=21%  Similarity=0.208  Sum_probs=149.1

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|...+.||+|+||.||++.+..+++.||+|.+......   .....+.+|+.++..+.+||||+++++++..++..++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence            4577788999999999999999999999999998754322   3345678999999998569999999999999999999


Q ss_pred             EEeccCCCChHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          105 VMELCQGGDLFDRII-----AKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       105 v~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +|||+.. ++.++..     ....+++..+..++.|++.||.|||+ .+++||||||+||++   +.++.++|+|||++.
T Consensus        81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~  156 (288)
T cd06616          81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISG  156 (288)
T ss_pred             EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhH
Confidence            9999965 6655432     23568999999999999999999997 499999999999999   677899999999997


Q ss_pred             cccccCC-------CCCCChHHHHHH--HHHHHhhhhhhHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRM--KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~--~~~~~~~d~~s~~~~~~  214 (436)
                      .......       ....+||.+.+.  ..++.++|+||+|+.++
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  201 (288)
T cd06616         157 QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY  201 (288)
T ss_pred             HhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence            6543211       123389988765  36888999999965543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.95  E-value=7.9e-27  Score=219.56  Aligned_cols=189  Identities=22%  Similarity=0.242  Sum_probs=152.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .+....++|++.+.||+|+||.||+|.+..+++.||||.+......   .....+.+|+.++..+.+||||+++++++..
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~   85 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK---EENKRILMDLDVVLKSHDCPYIVKCYGYFIT   85 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh---HHHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence            4445567899999999999999999999988999999998754322   2334566777777776569999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ...+|+||||+++ +|..++.. .+.+++..+..++.|++.|+.|||+ .+|+||||+|+||++   +.++.+||+|||+
T Consensus        86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~  161 (296)
T cd06618          86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGI  161 (296)
T ss_pred             CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECcccc
Confidence            9999999999864 78777765 3568999999999999999999997 699999999999999   6788999999999


Q ss_pred             cccccccCC-------CCCCChHHHHHH---HHHHHhhhhhhHHHHHH
Q 042392          177 ALLFEEEGG-------EASDDTSVILRM---KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       177 a~~~~~~~~-------~~~~~pe~~~~~---~~~~~~~d~~s~~~~~~  214 (436)
                      +..+.....       ....+||.+.+.   ..++.++|+||+|+.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  209 (296)
T cd06618         162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV  209 (296)
T ss_pred             chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence            986543221       122378887643   34778999999955443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=1.4e-27  Score=228.94  Aligned_cols=186  Identities=23%  Similarity=0.350  Sum_probs=153.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC-
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE-   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-   99 (436)
                      ..+.++|++.+.||+|+||.||+|.+..++..+|+|.+.......  .....+.+|+.+++.+.+||||+++++++... 
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~--~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~   80 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA--TDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN   80 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc--hhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence            356789999999999999999999999899999999886533221  23345678999999995699999999988653 


Q ss_pred             -CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 -TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 -~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                       ..+|+||||+++ +|..++... .+++..+..++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++.
T Consensus        81 ~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~  155 (337)
T cd07852          81 DKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLAR  155 (337)
T ss_pred             CceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchh
Confidence             468999999975 999888765 68889999999999999999999999999999999999   788899999999998


Q ss_pred             cccccCCC-------------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGGE-------------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~~-------------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........             ...+||.+.+...++.++|+||+|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l  203 (337)
T cd07852         156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL  203 (337)
T ss_pred             ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHH
Confidence            76443211             123788776656678899999995544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=3.3e-27  Score=218.86  Aligned_cols=177  Identities=18%  Similarity=0.199  Sum_probs=137.1

Q ss_pred             eeecccCCeEEEEEEECCC--CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRGRFGVTYLCTENST--NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +.||+|+||.||+|.....  ...+++|.+.....   ......+.+|+.+++.+ +||||+++++.+.....+|+||||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~   76 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS---SKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEY   76 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC---hHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEec
Confidence            3699999999999975332  23456666544321   23456788999999999 699999999999999999999999


Q ss_pred             cCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          109 CQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       109 ~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      +++|+|.+++.+.    ...++..+..++.||+.||.|||+.+++||||||+|||+   +.++.++|+|||++.......
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~  153 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKED  153 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcch
Confidence            9999999999764    235677788999999999999999999999999999999   678899999999986432110


Q ss_pred             ----------CCCCCChHHHHHH------HHHHHhhhhhhHHHHHH
Q 042392          185 ----------GEASDDTSVILRM------KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ----------~~~~~~pe~~~~~------~~~~~~~d~~s~~~~~~  214 (436)
                                .....+||.+...      ..++.++|+||+|++++
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  199 (268)
T cd05086         154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLW  199 (268)
T ss_pred             hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHH
Confidence                      1122378876421      23467899999966543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.95  E-value=7.6e-27  Score=216.91  Aligned_cols=239  Identities=16%  Similarity=0.174  Sum_probs=168.3

Q ss_pred             eeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC---
Q 042392           27 YSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET---  100 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---  100 (436)
                      |++.++||+|+||.||+|.+.   .+++.||||++......  ......+.+|+++++.+ +||||+++++++....   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   77 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS--SSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKG   77 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC--hHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCC
Confidence            678899999999999999864   35789999998654322  23355688999999999 6999999999876432   


Q ss_pred             ---eEEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392          101 ---AVHVVMELCQGGDLFDRIIAK------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus       101 ---~~~iv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                         ..+++++|+++|+|..++...      ..++...+..++.|++.|+.|||+.+|+||||||+||++   +.++.+||
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl  154 (273)
T cd05074          78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCV  154 (273)
T ss_pred             cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEE
Confidence               257899999999998887542      137888999999999999999999999999999999999   67889999


Q ss_pred             EecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          172 TDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       172 ~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                      +|||+++.......          ....+||.+.. ..++.++|+||+|++++ +.+...             ..+-...
T Consensus       155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~-el~~~g-------------~~p~~~~  219 (273)
T cd05074         155 ADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMW-EIMTRG-------------QTPYAGV  219 (273)
T ss_pred             CcccccccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHH-HHhhCC-------------CCCCCCC
Confidence            99999986643211          01125666654 45778999999955443 332100             0011111


Q ss_pred             CHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          242 SYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       242 ~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +..++........     ...+..-.+.+.+++..+++.|+++.|++..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l  269 (273)
T cd05074         220 ENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL  269 (273)
T ss_pred             CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            2223333222211     11223333444455667888899999888765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.95  E-value=3.2e-27  Score=220.93  Aligned_cols=181  Identities=21%  Similarity=0.332  Sum_probs=153.5

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--CeEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TAVHV  104 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~i  104 (436)
                      |++.+.||+|+||.||+|.+..+++.+|+|.+......  ......+.+|+.+++.+ +|||++++++++...  +..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK--EGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc--ccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEE
Confidence            77899999999999999999999999999999866411  23345678899999999 599999999999888  88999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |+||+++ +|..++... ..+++..++.++.||+.||.|||..|++|+||+|+||++   +.++.++|+|||++......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          78 VFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             Eeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCC
Confidence            9999975 999888765 569999999999999999999999999999999999999   77889999999999877554


Q ss_pred             CC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG---------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..         ....+||.+.+...++.++|+|++|+++.
T Consensus       154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (287)
T cd07840         154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA  193 (287)
T ss_pred             CcccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence            31         11237887766556788999999965543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.6e-27  Score=242.93  Aligned_cols=240  Identities=21%  Similarity=0.243  Sum_probs=187.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNM-----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      -...-++.+.||+|.||.||.|.......     .||||.+.+...   ......+.+|..+|+.+ +|||||+++++..
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~---~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS---EQEVSDFLKEALLMSKF-DHPNIVSLIGVCL  765 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC---HHHHHHHHHHHHHHhcC-CCcceeeEEEeec
Confidence            34567889999999999999998764322     499998876543   45677899999999999 7999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      +....+|++|||.||+|..+|++.       ..++......++.+|+.|+.||+++++|||||..+|+|+   +....||
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VK  842 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVK  842 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEE
Confidence            999999999999999999999986       238899999999999999999999999999999999999   6778999


Q ss_pred             EEecCCccccccc------CC----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCc
Q 042392          171 VTDFGSALLFEEE------GG----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       171 l~DFG~a~~~~~~------~~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      |+|||+|+.+-..      ..    ....+||.+.. ..|+.++|+||+|+.+             +++|. ++..+-+-
T Consensus       843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVll-------------WEifs-lG~~PY~~  907 (1025)
T KOG1095|consen  843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLL-------------WEIFS-LGATPYPS  907 (1025)
T ss_pred             EcccchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHH-------------HHHHh-CCCCCCCC
Confidence            9999999944221      11    11128998887 6899999999995543             34553 33445555


Q ss_pred             cCHHHHHHHHHh---cC--CCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          241 LSYDELRAGLTK---VG--SMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       241 i~~~eL~~~l~~---~~--~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .+-.++......   +.  ...++.-.+-|......++..|.+|-..+.
T Consensus       908 ~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  908 RSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             cchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            555555553222   22  233555566666667778888999887776

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=9.7e-27  Score=213.46  Aligned_cols=175  Identities=21%  Similarity=0.265  Sum_probs=147.1

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccC
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ  110 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~  110 (436)
                      +.||+|+||.||+|.+.. ++.||+|.+......   .....+.+|+.+++.+ +||||+++++++......|+||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~   75 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP---DLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVP   75 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH---HHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCC
Confidence            469999999999999877 999999988654332   2445788999999999 69999999999999999999999999


Q ss_pred             CCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----
Q 042392          111 GGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----  185 (436)
Q Consensus       111 ~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----  185 (436)
                      +++|.+++... ..+++..+..++.+++.||.|||+++++||||||+||++   +.++.++|+|||++........    
T Consensus        76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (251)
T cd05041          76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSD  152 (251)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceecc
Confidence            99999999764 458899999999999999999999999999999999999   7788999999999986542111    


Q ss_pred             ------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                            ....+||.+.+ ..++..+|+||+|++++
T Consensus       153 ~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i~~  186 (251)
T cd05041         153 GLKQIPIKWTAPEALNY-GRYTSESDVWSYGILLW  186 (251)
T ss_pred             ccCcceeccCChHhhcc-CCCCcchhHHHHHHHHH
Confidence                  11337887765 46788999999965553

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=1.3e-27  Score=224.51  Aligned_cols=181  Identities=27%  Similarity=0.335  Sum_probs=153.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|.+.+.||+|+||.||+|.+..++..||+|.+.....    .....+.+|+.+++.+ +||||+++++++...+..
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~   91 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ----PKKELIINEILVMREN-KHPNIVNYLDSYLVGDEL   91 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc----hHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcE
Confidence            34789999999999999999999988999999999854322    2245678999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|+||+++++|.+++.+. .+++..+..++.|++.|+.|||++|++||||||+||++   +.++.++|+|||++.....
T Consensus        92 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          92 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             EEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceecccc
Confidence            9999999999999988654 48899999999999999999999999999999999999   6778999999998876544


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....        ...+||.+.+ ..++.++|+|++|+.+
T Consensus       168 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll  205 (293)
T cd06647         168 EQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  205 (293)
T ss_pred             cccccccccCChhhcCchhhcc-CCCCchhhHHHHHHHH
Confidence            3221        1237887765 4578899999995544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=1.8e-27  Score=219.05  Aligned_cols=181  Identities=22%  Similarity=0.382  Sum_probs=150.8

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|.+.+.||+|+||.||+|.++.+|..||+|.+.......  .....+.+|+.+++.+ +||||+++++.+......|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--KEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--hhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEE
Confidence            5899999999999999999999999999999986643221  2345678999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC-CcEEEEecCCcccccc
Q 042392          106 MELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN-ALLKVTDFGSALLFEE  182 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~kl~DFG~a~~~~~  182 (436)
                      +||+++++|.+++....  .+++..+..++.|++.||.|||+.+++|+||||+||++   +.+ ..++|+|||.+.....
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL---SKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---cCCCCeEEecccccchhccC
Confidence            99999999999987643  47899999999999999999999999999999999999   444 4579999999987654


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....        ...+||.+.+ ..++.++|+||+|+.+
T Consensus       155 ~~~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il  192 (257)
T cd08225         155 SMELAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVL  192 (257)
T ss_pred             CcccccccCCCccccCHHHHcC-CCCCchhhHHHHHHHH
Confidence            3211        1226887654 3577899999995544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-28  Score=211.64  Aligned_cols=240  Identities=20%  Similarity=0.179  Sum_probs=181.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +.+.+..||.|+.|.|++++.+.+|...|||.+.+...   .+..++++..+.++....+.|.||+.+++|.....++|.
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N---kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC---HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence            35567789999999999999999999999999987653   456778899999888775689999999999999999999


Q ss_pred             EeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||.+.. .+..++++ .++++|..+-.+...++.||.||. +++|+|||+||+|||+   +..|++||||||.|-.+...
T Consensus       170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecc
Confidence            999854 55555554 467999999999999999999998 5789999999999999   89999999999999887654


Q ss_pred             CCCC-------CCChHHHHH--HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC
Q 042392          184 GGEA-------SDDTSVILR--MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG  254 (436)
Q Consensus       184 ~~~~-------~~~pe~~~~--~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~  254 (436)
                      ....       ..+||-+.-  ...|.-.+|+||+|++++--..+..             .........+-|.+.+....
T Consensus       246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~y-------------Py~~c~tdFe~ltkvln~eP  312 (391)
T KOG0983|consen  246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQY-------------PYKGCKTDFEVLTKVLNEEP  312 (391)
T ss_pred             cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccC-------------CCCCCCccHHHHHHHHhcCC
Confidence            3322       227776652  2468899999999887753221111             11222344455555555433


Q ss_pred             CC------CCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          255 SM------LTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       255 ~~------~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +.      ++..-.+-+-..+..|...+..|.+.+.+
T Consensus       313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            22      34444455555667777888888888765

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-29  Score=234.40  Aligned_cols=189  Identities=28%  Similarity=0.365  Sum_probs=166.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -..+.+++..||-|+||.|-++..+.....+|+|++++....+ ....+.+..|-++|..+ .+|.||++|..|.+...+
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd-tkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyv  495 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD-TKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYV  495 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccc-hhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhh
Confidence            4456788899999999999999887666679999998876555 44567788999999999 499999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+.||-|-||.|+..++.++.+.+..++.++..+++|+.|||++|||.|||||+|.++   +.+|.+||.|||+|+.+..
T Consensus       496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~  572 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGS  572 (732)
T ss_pred             hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999999   8899999999999999988


Q ss_pred             cCCCCCC-------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          183 EGGEASD-------DTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       183 ~~~~~~~-------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ...+.+.       |||+++. +....++|.|++|+ ++.+.+
T Consensus       573 g~KTwTFcGTpEYVAPEIILn-KGHD~avDyWaLGI-li~ELL  613 (732)
T KOG0614|consen  573 GRKTWTFCGTPEYVAPEIILN-KGHDRAVDYWALGI-LIYELL  613 (732)
T ss_pred             CCceeeecCCcccccchhhhc-cCcchhhHHHHHHH-HHHHHH
Confidence            7665543       8999987 45678999999844 444444

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.95  E-value=6e-27  Score=219.46  Aligned_cols=185  Identities=25%  Similarity=0.390  Sum_probs=153.8

Q ss_pred             ceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +|++.+.||+|+||.||+|++.   .++..||||++.+............+.+|+.+++.+.+||||+++++.+.....+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4889999999999999999864   4678999999875433222334456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++|+|.+++.....+++..++.++.|++.||.|||+.+++||||+|.||++   +.++.++|+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECcccccccc
Confidence            9999999999999999887789999999999999999999999999999999999999   6778999999999876543


Q ss_pred             cCC---------CCCCChHHHHHHH-HHHHhhhhhhHHHHH
Q 042392          183 EGG---------EASDDTSVILRMK-QFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~---------~~~~~pe~~~~~~-~~~~~~d~~s~~~~~  213 (436)
                      ...         ....+||.+.+.. .++..+|+|++|+++
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il  198 (288)
T cd05583         158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT  198 (288)
T ss_pred             ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH
Confidence            221         1123788876532 367789999996554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=2.4e-26  Score=215.26  Aligned_cols=181  Identities=24%  Similarity=0.351  Sum_probs=149.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--CeE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TAV  102 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~  102 (436)
                      ++|...+.||.|++|.||+|.+..+++.||+|.+.....   ......+.+|+++++.+ +||||+++++++...  ..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~   76 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSI   76 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeE
Confidence            368899999999999999999999999999999875432   23446688999999999 699999999988653  478


Q ss_pred             EEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          103 HVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      |+||||+++++|.+++..    ...+++..+..++.||+.||.|||+.+++|+||+|.||++   +.++.++|+|||++.
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~  153 (287)
T cd06621          77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSG  153 (287)
T ss_pred             EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccc
Confidence            999999999999887754    2458899999999999999999999999999999999999   677889999999987


Q ss_pred             cccccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGG------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......      ....+||.+.+ ..++..+|+|++|+.+
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il  193 (287)
T cd06621         154 ELVNSLAGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTL  193 (287)
T ss_pred             cccccccccccCCccccCHHHhcC-CCCCchhhHHHHHHHH
Confidence            6543221      11227887755 4678899999995443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=5.8e-27  Score=220.52  Aligned_cols=183  Identities=24%  Similarity=0.312  Sum_probs=152.1

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+..-|.....||+|+||.||+|.+..+++.||+|.+.....    .....+.+|+.+++.+ +||||+++++++...+.
T Consensus        18 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~   92 (297)
T cd06659          18 DPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEE   92 (297)
T ss_pred             cchhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCe
Confidence            344456667789999999999999999999999999865432    2245678999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      .|+|+||+++++|..++.. ..+++..++.++.|++.||.|||+.+++||||||+||++   +.++.++|+|||++....
T Consensus        93 ~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~  168 (297)
T cd06659          93 LWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQIS  168 (297)
T ss_pred             EEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhcc
Confidence            9999999999999887754 568999999999999999999999999999999999999   778899999999987654


Q ss_pred             ccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....        ....+||.+.+ ..++.++|+||+|++++
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~  208 (297)
T cd06659         169 KDVPKRKSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVI  208 (297)
T ss_pred             cccccccceecCccccCHHHHcc-CCCCchhhHHHHHHHHH
Confidence            3211        12238888765 45788999999965443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.95  E-value=3.1e-27  Score=217.20  Aligned_cols=182  Identities=23%  Similarity=0.334  Sum_probs=153.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+.......  .....+.+|+.+++.+ +||||+++++++......|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ--KEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIV   77 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH--HHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEE
Confidence            5899999999999999999999999999999987654322  3345677899999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          106 MELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +||+++++|.+++..    ...+++..++.++.|++.||.|||+.|++|+||+|.||++   +.++.+||+|||++....
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~---~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL---VANDLVKIGDLGISKVLK  154 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---ecCCcEEEeeccchhhhc
Confidence            999999999998876    2458899999999999999999999999999999999999   567889999999998765


Q ss_pred             ccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....      ...+||.+.+ ..++..+|+|++|++++
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~  192 (256)
T cd08530         155 KNMAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLY  192 (256)
T ss_pred             cCCcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHH
Confidence            43111      1227777755 46778899999965554

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=2.9e-27  Score=223.97  Aligned_cols=183  Identities=21%  Similarity=0.304  Sum_probs=150.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC----
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE----   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~----   99 (436)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.+.......  .......+|+.+++.+ +||||+++++++...    
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   83 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD--GFPITALREIKILKKL-KHPNVVPLIDMAVERPDKS   83 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC--CcchhHHHHHHHHHhc-CCCCccchhhheecccccc
Confidence            689999999999999999999999999999999986543221  2233567899999999 699999999987543    


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                          ..+|+||||+.+ +|...+... ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+||
T Consensus        84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~df  159 (311)
T cd07866          84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADF  159 (311)
T ss_pred             cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcC
Confidence                347999999975 787777653 469999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCCC-------------------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGGE-------------------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~~-------------------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |++.........                   ...+||.+.+...++.++|+||+|+++
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  217 (311)
T cd07866         160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVF  217 (311)
T ss_pred             ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHH
Confidence            999865432211                   123789887766688899999995544

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=218.78  Aligned_cols=196  Identities=23%  Similarity=0.284  Sum_probs=170.2

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..+..-..+|.++++||+|+|++|..++.+.|.+.||+|++++...+. .+.....+.|-.+..+.++||.+|.++.+|+
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfq  321 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ  321 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhc
Confidence            345556678999999999999999999999999999999998876554 4455667888888888889999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ++..+++|.||++||+|.-.++++.++++..++.+...|+.||.|||++||+.||||..|+|+   +..|++||+|+|++
T Consensus       322 tesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmc  398 (593)
T KOG0695|consen  322 TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMC  398 (593)
T ss_pred             ccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchh
Confidence            999999999999999999999998999999999999999999999999999999999999999   88999999999999


Q ss_pred             ccccccCCCCCC--------ChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          178 LLFEEEGGEASD--------DTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       178 ~~~~~~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      +.--.++...+.        |||++.+ ..|...+|.|++|+.++..+-
T Consensus       399 ke~l~~gd~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemma  446 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMA  446 (593)
T ss_pred             hcCCCCCcccccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHc
Confidence            865443333222        8998887 579999999999665554433

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=1.9e-26  Score=212.91  Aligned_cols=235  Identities=18%  Similarity=0.189  Sum_probs=165.2

Q ss_pred             eeecccCCeEEEEEEECC---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee-cCCeEEEEE
Q 042392           31 RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE-DETAVHVVM  106 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-~~~~~~iv~  106 (436)
                      +.||+|+||.||+|.+..   .+..||+|.+.....   ......+.+|+.+++.+ +||||+++++++. .++..++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD---LEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC---HHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEE
Confidence            468999999999998653   346799998754321   23345678899999999 6999999999765 456689999


Q ss_pred             eccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-
Q 042392          107 ELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-  184 (436)
                      ||+++|+|.+++.... ..+...+..++.|++.||.|||+.+++||||||+|||+   +.++.+||+|||+++...... 
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~  153 (262)
T cd05058          77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEY  153 (262)
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcc
Confidence            9999999999997643 46777888999999999999999999999999999999   677899999999997553211 


Q ss_pred             -----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc
Q 042392          185 -----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV  253 (436)
Q Consensus       185 -----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~  253 (436)
                                 .....+||.+.+ ..++.++|+||+|++++ +.++..             ..+....+..++...+...
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~~~-------------~~~~~~~~~~~~~~~~~~~  218 (262)
T cd05058         154 YSVHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLW-ELMTRG-------------APPYPDVDSFDITVYLLQG  218 (262)
T ss_pred             eeecccccCcCCccccChhHhcc-CccchHHHHHHHHHHHH-HHHcCC-------------CCCCCCCCHHHHHHHHhcC
Confidence                       011237887765 46788999999965543 322100             0000001122222222211


Q ss_pred             -----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          254 -----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       254 -----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                           ....+..-.+.+.+.+..+++.|+++.+.+..+.
T Consensus       219 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~  257 (262)
T cd05058         219 RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE  257 (262)
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence                 1112333345555666778888999988876543

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.95  E-value=9.6e-27  Score=214.92  Aligned_cols=175  Identities=28%  Similarity=0.356  Sum_probs=148.8

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||.|+||.||+|++..+|+.||+|++....... ......+.+|+.+++.+ +||||+++++.+......|+|+||++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-KNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhh-hhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCC
Confidence            689999999999999899999999987654322 34456788999999999 5999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC-------
Q 042392          113 DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG-------  185 (436)
Q Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~-------  185 (436)
                      +|.+++.+.+.+++..+..++.||+.||.|||+.+++||||+|+||++   +.++.++|+|||++........       
T Consensus        79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  155 (265)
T cd05579          79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDE  155 (265)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCccccccccc
Confidence            999999887789999999999999999999999999999999999999   7788999999999876543311       


Q ss_pred             ---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          186 ---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       186 ---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                               ....+||...+. .++.++|+|++|+.+
T Consensus       156 ~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Dv~slG~~~  191 (265)
T cd05579         156 KEDKRIVGTPDYIAPEVILGQ-GHSKTVDWWSLGCIL  191 (265)
T ss_pred             ccccCcccCccccCHHHhcCC-CCCcchhhHHHHHHH
Confidence                     112278877653 477889999995544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=1e-28  Score=205.57  Aligned_cols=184  Identities=22%  Similarity=0.235  Sum_probs=153.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      ...-+..||+|+||.|-+-++..+|...|+|.++....   ....+.+++|+.+.......|.+|++|+.+...+.+||.
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn---~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN---SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC---hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            34456779999999999999999999999999876543   345677889999888777899999999999999999999


Q ss_pred             EeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          106 MELCQGGDLFDRII----AKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       106 ~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ||.+.. +|..+-+    ..+.++|..+-+++..++.||.|||+ ..++|||+||.|||+   +..|+||+||||.+-.+
T Consensus       124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYL  199 (282)
T ss_pred             HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceee
Confidence            999976 7765543    34569999999999999999999996 589999999999999   88999999999999887


Q ss_pred             cccCC-------CCCCChHHHHH---HHHHHHhhhhhhHHHHHHHh
Q 042392          181 EEEGG-------EASDDTSVILR---MKQFRRMSKLKKLTVKVIVE  216 (436)
Q Consensus       181 ~~~~~-------~~~~~pe~~~~---~~~~~~~~d~~s~~~~~~~~  216 (436)
                      .++-.       ....|||.+..   .+.|+-++|+||+|.+++.-
T Consensus       200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiEl  245 (282)
T KOG0984|consen  200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEM  245 (282)
T ss_pred             hhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhh
Confidence            65322       23338887652   23789999999999988743

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=6.9e-27  Score=224.56  Aligned_cols=185  Identities=21%  Similarity=0.318  Sum_probs=153.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|++..++..||||++......  ......+.+|+.+++.+ +||||+++++++.....
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   88 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS--AIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASS   88 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch--hhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccc
Confidence            4667899999999999999999999999999999988654222  23345677899999999 69999999998876554


Q ss_pred             ------EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          102 ------VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       102 ------~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                            +|+|+||+ +++|.+++.. .++++..++.++.|++.||.|||+.||+||||||+||++   +.++.++|+|||
T Consensus        89 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg  163 (343)
T cd07851          89 LEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFG  163 (343)
T ss_pred             ccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEcccc
Confidence                  89999999 5699998865 469999999999999999999999999999999999999   678899999999


Q ss_pred             CcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          176 SALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       176 ~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ++.........     ...+||.+.+...++.++|+||+|+.++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~  207 (343)
T cd07851         164 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  207 (343)
T ss_pred             ccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHH
Confidence            99876433111     1237888765446778999999965543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.9e-28  Score=231.73  Aligned_cols=238  Identities=26%  Similarity=0.369  Sum_probs=182.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.+.|.+...+|.|+||.|..|.+..+++.+|+|++.+...        ...+|+.++....+||||+++.+++.+...
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~  390 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGKE  390 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCce
Confidence            356789999999999999999999999999999999977622        234677777777789999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+|||++.|+.|.+.+.....+. .++..|+++|+.|+.|||++|||||||||+|||+.  +..++++|+|||.++...
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             eeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCc
Confidence            999999999999999888766555 78889999999999999999999999999999994  367889999999999887


Q ss_pred             ccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh--cC
Q 042392          182 EEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--VG  254 (436)
Q Consensus       182 ~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~--~~  254 (436)
                      .....     ...|||++. ...|+.++|+||+|+.+ .++++..      .   .+...+.|    .++...+..  +.
T Consensus       468 ~~~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlL-y~ML~G~------t---p~~~~P~~----~ei~~~i~~~~~s  532 (612)
T KOG0603|consen  468 RSCDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLL-YEMLTGR------T---LFAAHPAG----IEIHTRIQMPKFS  532 (612)
T ss_pred             hhhcccchhhcccChhhhc-cCCCCcchhhHHHHHHH-HHHHhCC------C---ccccCCch----HHHHHhhcCCccc
Confidence            66221     122899888 57899999999995544 3443211      1   11223333    334333322  11


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       255 ~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...|+..=+.+-..+..|+..|++..+....
T Consensus       533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  533 ECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            3444444444445567888888888887654

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.95  E-value=1.1e-26  Score=213.55  Aligned_cols=182  Identities=29%  Similarity=0.429  Sum_probs=156.6

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--CeEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--TAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--~~~~  103 (436)
                      +|++.+.||+|++|.||+|.+..++..|++|++......  ......+.+|+.+++.+ +||||+++++.+...  ..++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEE
Confidence            588899999999999999999989999999998765432  23456788999999999 699999999999988  8999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|+||+++++|.+++.+...+++..+..++.|++.|+.|||+.+++|+||+|+||++   +.++.++|+|||.+......
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEecccc
Confidence            999999999999999888789999999999999999999999999999999999999   66789999999999877654


Q ss_pred             CC----C------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          184 GG----E------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~----~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..    .      ...+||.+.+. .++.++|+|++|++++
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~  194 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIRGE-EYGRAADIWSLGCTVI  194 (260)
T ss_pred             cccccccCCCCCccccCHhhhcCC-CCCchhhHHHHHHHHH
Confidence            32    1      11277776553 4788999999966543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=1.1e-26  Score=218.33  Aligned_cols=187  Identities=16%  Similarity=0.152  Sum_probs=137.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhH-------HHHHHHHHHHHHhcCCCCCeee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAEN-------DMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      ....+|++.+.||+|+||.||+|.+..+   +..+|+|+..........+.       ......+...+..+ +|+||++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~   87 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK   87 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence            3446899999999999999999998877   67788886443321110000       01112233344556 6999999


Q ss_pred             ceeeeecCC----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           92 LKSAHEDET----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        92 ~~~~~~~~~----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      ++++.....    ..+++++++.. ++.+.+......++..++.++.|++.||.|||+.+|+||||||+|||+   +.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~  163 (294)
T PHA02882         88 YYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNN  163 (294)
T ss_pred             EEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCC
Confidence            998765443    45788998854 787777766567888999999999999999999999999999999999   6778


Q ss_pred             cEEEEecCCcccccccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          168 LLKVTDFGSALLFEEEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .++|+|||+|+.+.....               ....+||...+ ..|+.++|+||+|++++
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~  224 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCML  224 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHH
Confidence            999999999987632110               11127776655 56889999999966554

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=4.4e-27  Score=224.57  Aligned_cols=177  Identities=14%  Similarity=0.191  Sum_probs=145.2

Q ss_pred             eeeccc--CCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRG--RFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      ..||+|  +||+||+|++..+|+.||+|++......  ....+.+.+|+.+++.+ +||||+++++++...+..|+|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~   80 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPF   80 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEec
Confidence            456666  9999999999999999999998754332  23456788999999999 699999999999999999999999


Q ss_pred             cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC--
Q 042392          109 CQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG--  184 (436)
Q Consensus       109 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--  184 (436)
                      +.+++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++   ..++.++++|||.+.......  
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHhhhhccCcc
Confidence            99999999988743  48899999999999999999999999999999999999   677899999998654332211  


Q ss_pred             -------------CCCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          185 -------------GEASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 -------------~~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                                   .....+||.+.+. ..|+.++|+||+|+++
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l  200 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITA  200 (328)
T ss_pred             ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence                         1113388888653 3478899999995554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=1e-26  Score=217.06  Aligned_cols=181  Identities=25%  Similarity=0.370  Sum_probs=154.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |++.+.||+|+||.||+|++..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++.....+|+|+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE--EGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVF   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc--ccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEe
Confidence            67788999999999999999999999999998765421  23345677899999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          107 ELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       107 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      ||+++ +|.+++.+. ..+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||++........
T Consensus        78 e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          78 EYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             cCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCcc
Confidence            99985 999999886 579999999999999999999999999999999999999   6788999999999987644321


Q ss_pred             --------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 --------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 --------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                              ....+||.+.+...++.++|+|++|+.++
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~  190 (282)
T cd07829         154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFA  190 (282)
T ss_pred             ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHH
Confidence                    11238888876557888999999965543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=1.5e-26  Score=215.94  Aligned_cols=181  Identities=25%  Similarity=0.372  Sum_probs=153.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |++.+.||+|++|.||+|.+..+++.+|+|.+......  ......+.+|+.+++.+ +||||+++++++.....+|+|+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVF   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEE
Confidence            67789999999999999999989999999998765432  13345778899999999 5999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          107 ELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       107 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      ||+++ +|.+++... ..+++..+..++.|++.||.|||+.+|+|+||||+||++   +.++.++|+|||.+........
T Consensus        78 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~  153 (283)
T cd05118          78 EFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVR  153 (283)
T ss_pred             eccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCcc
Confidence            99976 898888774 568999999999999999999999999999999999999   6778999999999987755331


Q ss_pred             --------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 --------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 --------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                              ....+||.+.+...++.++|+|++|+.++
T Consensus       154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~  190 (283)
T cd05118         154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFA  190 (283)
T ss_pred             cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHH
Confidence                    11238998877557889999999965543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=1.6e-26  Score=220.46  Aligned_cols=183  Identities=22%  Similarity=0.274  Sum_probs=151.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-CCe
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-ETA  101 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~  101 (436)
                      +..+|++.+.||.|+||.||+|.+..+++.||+|.+.+....  ......+.+|+.+++.+ +||||+++++++.. ...
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST--PVLAKRTYRELKLLKHL-RHENIISLSDIFISPLED   84 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc--cchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCc
Confidence            567899999999999999999999999999999988654322  23345677899999999 69999999999865 467


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      .|+|+||+. ++|..++.. .++++..+..++.|++.||.|||+.+|+||||+|.||++   +.++.++|+|||.+....
T Consensus        85 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~  159 (328)
T cd07856          85 IYFVTELLG-TDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQD  159 (328)
T ss_pred             EEEEeehhc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccC
Confidence            899999994 589887754 458888999999999999999999999999999999999   678899999999998654


Q ss_pred             ccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          182 EEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....     ...+||.+.+...++.++|+|++|+++
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il  196 (328)
T cd07856         160 PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIF  196 (328)
T ss_pred             CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHH
Confidence            32211     123788776545788899999995554

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.95  E-value=4.3e-26  Score=213.37  Aligned_cols=180  Identities=27%  Similarity=0.352  Sum_probs=151.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ..|.-.+.||+|++|.||+|.+..+++.+|+|.+....    ......+.+|+.+++.+ +||||+++++++...+..|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~   93 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWV   93 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEE
Confidence            45666789999999999999999999999999886432    22345678999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |+||+++++|.+++.. +++++..+..++.|++.|+.|||++|++||||+|+||++   +.++.++|+|||++.......
T Consensus        94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~  169 (285)
T cd06648          94 VMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEV  169 (285)
T ss_pred             EEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCC
Confidence            9999999999999877 668999999999999999999999999999999999999   778899999999887654322


Q ss_pred             C--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 G--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .        ....+||.+.+ ..++.++|+|++|+++.
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~  206 (285)
T cd06648         170 PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVI  206 (285)
T ss_pred             cccccccCCccccCHHHhcC-CCCCCcccHHHHHHHHH
Confidence            1        11237887755 45788999999955543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.95  E-value=2.4e-27  Score=245.35  Aligned_cols=154  Identities=27%  Similarity=0.429  Sum_probs=139.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....... ......+.+|+.+++.+ +||||++++.++.....+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN-KNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC-HHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEE
Confidence            468999999999999999999999999999999997654322 33456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+.|++|.+++...+.+++..++.++.||+.||.|||.++|+||||||+|||+   +.++.+||+|||+++....
T Consensus        81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCccccC
Confidence            999999999999999888889999999999999999999999999999999999999   6778999999999987643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=1.4e-26  Score=214.69  Aligned_cols=179  Identities=21%  Similarity=0.291  Sum_probs=142.4

Q ss_pred             eeecccCCeEEEEEEECCCC------ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           31 RMLGRGRFGVTYLCTENSTN------MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +.||+|+||.||+|++....      ..+|+|.+.....   ......+.+|+.+++.+ +||||+++++++......|+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT---DQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYI   76 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc---hhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEE
Confidence            36899999999999986543      6899998764422   12345678899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC--CCCcEEEEecC
Q 042392          105 VMELCQGGDLFDRIIAK-------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD--DNALLKVTDFG  175 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~--~~~~~kl~DFG  175 (436)
                      ||||+++++|.+++...       ..+++..+..++.|++.|+.|||+.+++|+||||+||++...+  ....++|+|||
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg  156 (269)
T cd05044          77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG  156 (269)
T ss_pred             EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence            99999999999999753       2377889999999999999999999999999999999994321  12289999999


Q ss_pred             CcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          176 SALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       176 ~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ++........          ....+||.+.+ ..++.++|+||+|++++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~  204 (269)
T cd05044         157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMW  204 (269)
T ss_pred             cccccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHH
Confidence            9976532211          11237887765 45788999999955543

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=2e-26  Score=215.60  Aligned_cols=184  Identities=22%  Similarity=0.314  Sum_probs=149.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeecCCe---
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHEDETA---  101 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~---  101 (436)
                      |++.+.||+|+||.||+|++..++..||+|.+......  ......+.+|+.+++.++  +||||+++++++.....   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            78899999999999999999888999999999754332  122345667888777764  59999999999988776   


Q ss_pred             --EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          102 --VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       102 --~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                        +|++|||+++ +|.+++....  .+++..++.++.|++.||.|||+.+++|+||+|+||++   +.++.++|+|||++
T Consensus        79 ~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~  154 (287)
T cd07838          79 LKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLA  154 (287)
T ss_pred             ceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcc
Confidence              9999999975 8999887643  48999999999999999999999999999999999999   67789999999999


Q ss_pred             ccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          178 LLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       178 ~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .........       ...+||.+.+ ..++.++|+|++| +++.+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G-~~l~~l~  200 (287)
T cd07838         155 RIYSFEMALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVG-CIFAELF  200 (287)
T ss_pred             eeccCCcccccccccccccChHHhcc-CCCCCcchhhhHH-HHHHHHH
Confidence            876433221       1238888766 4578899999995 4444443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.6e-26  Score=221.91  Aligned_cols=182  Identities=21%  Similarity=0.288  Sum_probs=148.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      +..+|.+.+.||+|+||.||+|++..+|+.||+|.+.+....  ......+.+|+.+++.+ +||||+++++++...   
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   89 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS--EIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSG   89 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc--ccchhHHHHHHHHHHhc-CCCCccchhheecccccC
Confidence            356899999999999999999999999999999998754322  12334578999999999 699999999998654   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          100 ---TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       100 ---~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                         ..+|+|+||+.. +|..++  ...+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||+
T Consensus        90 ~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~  163 (342)
T cd07879          90 DEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGL  163 (342)
T ss_pred             CCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCC
Confidence               347999999965 777664  2358999999999999999999999999999999999999   6788999999999


Q ss_pred             cccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          177 ALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       177 a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ++........     ...+||.+.+...++.++|+||+|+.+
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil  205 (342)
T cd07879         164 ARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIM  205 (342)
T ss_pred             CcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHH
Confidence            9865432211     123888887655678899999995544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=1.5e-26  Score=216.64  Aligned_cols=183  Identities=29%  Similarity=0.356  Sum_probs=157.1

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .....|++...||+|+||.||+|.+..++..||+|++.....     ....+.+|+.+++.+ +||||+++++++.....
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   89 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDE   89 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCE
Confidence            456679999999999999999999998999999999875432     345678999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .|+|+||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||++   +.++.++|+|||++...
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~  166 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQL  166 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhh
Confidence            999999999999999999876 79999999999999999999999999999999999999   67889999999988765


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....        ....+||.+.+ ..++.++|+|++|++++
T Consensus       167 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~  207 (286)
T cd06614         167 TKEKSKRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCI  207 (286)
T ss_pred             ccchhhhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHH
Confidence            43211        11237887665 45788999999966554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=3.1e-26  Score=216.72  Aligned_cols=185  Identities=26%  Similarity=0.341  Sum_probs=152.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ....|+..+.||+|+||.||+|++..++..+|+|.+....... ......+.+|+.+++.+ +|||++++++++......
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   90 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA   90 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-hHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCee
Confidence            4456888999999999999999999999999999986543222 23345677899999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+. |+|.+++.. ..++++..+..++.|++.|+.|||+.+++||||+|+||++   +.++.++|+|||++....
T Consensus        91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeec
Confidence            99999997 488887754 3458999999999999999999999999999999999999   677899999999988765


Q ss_pred             ccCCC----CCCChHHHHHH--HHHHHhhhhhhHHHHH
Q 042392          182 EEGGE----ASDDTSVILRM--KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~~----~~~~pe~~~~~--~~~~~~~d~~s~~~~~  213 (436)
                      .....    ...+||.+.+.  ..++.++|+||+|+.+
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il  204 (308)
T cd06634         167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (308)
T ss_pred             CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHH
Confidence            43221    22388887642  3567889999995544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=1.9e-26  Score=215.45  Aligned_cols=180  Identities=28%  Similarity=0.407  Sum_probs=151.3

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |++.+.||+|++|.||+|+...+++.||||.+......   .......+|+..++.+.+||||+++++++...+..|+||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   77 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF   77 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence            78899999999999999999888999999988654321   122345679999999944999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          107 ELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||+ +|+|.+++....  .+++..+..++.|++.+|.|||+++++|+||+|.||++   +.++.++|+|||++.......
T Consensus        78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~  153 (283)
T cd07830          78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRP  153 (283)
T ss_pred             ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCC
Confidence            999 679999988764  68999999999999999999999999999999999999   778899999999998765422


Q ss_pred             CC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 GE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..       ...+||.+.+...++.++|+||+|+++
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l  189 (283)
T cd07830         154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIM  189 (283)
T ss_pred             CcCCCCCcccccCceeeecCcCcCCccchhhHHHHH
Confidence            11       123788876656678899999995554

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.2e-27  Score=234.46  Aligned_cols=211  Identities=23%  Similarity=0.315  Sum_probs=173.3

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--   98 (436)
                      ....+.|.+.++||.|.+|.||+++++.+++..|+|+......     ..+.+..|.++++.+++|||++.++++|..  
T Consensus        15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-----ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            4456679999999999999999999999999999999876543     345678899999999999999999999864  


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           99 ---ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        99 ---~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                         .+.+|+|||||.||+.-++++..  .++.|..+..|++.++.|+.+||.+.++|||+|-.|||+   +.++.|||+|
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvD  166 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVD  166 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEee
Confidence               46799999999999999999864  458899999999999999999999999999999999999   7889999999


Q ss_pred             cCCcccccccCCCCCC--------ChHHHHHHH----HHHHhhhhhhHHHHHHHhcC---ChhhHHHHHHHhhhhCCCCC
Q 042392          174 FGSALLFEEEGGEASD--------DTSVILRMK----QFRRMSKLKKLTVKVIVEYL---PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       174 FG~a~~~~~~~~~~~~--------~pe~~~~~~----~~~~~~d~~s~~~~~~~~~l---~~e~~~~l~~~F~~~D~~~~  238 (436)
                      ||.+..+.........        |||++....    .|+..+|+||+|++.+..--   +.-+...++.+|..--.++.
T Consensus       167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPP  246 (953)
T KOG0587|consen  167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPP  246 (953)
T ss_pred             eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCc
Confidence            9999988764333222        899887654    47789999999887765543   33344556667765544443


Q ss_pred             C
Q 042392          239 G  239 (436)
Q Consensus       239 g  239 (436)
                      .
T Consensus       247 k  247 (953)
T KOG0587|consen  247 K  247 (953)
T ss_pred             c
Confidence            3

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.95  E-value=5.1e-26  Score=208.27  Aligned_cols=180  Identities=26%  Similarity=0.391  Sum_probs=154.7

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      +|.+.+.||+|++|.||+|.+..++..+++|++.....    .....+.+|+.+++.+ +||||+++++++......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEE
Confidence            48889999999999999999988999999999876542    2446788999999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          106 MELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      +||+++++|.+++... ..+++..+..++.|++.|+.|||..|++||||+|+||++   +.++.++|+|||.+.......
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~  152 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTK  152 (253)
T ss_pred             EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeeccccccccccc
Confidence            9999999999999876 578999999999999999999999999999999999999   677899999999998776543


Q ss_pred             C-------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 G-------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .       ....+||.+.+. .++.++|+|++|++++
T Consensus       153 ~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~il~  188 (253)
T cd05122         153 ARNTMVGTPYWMAPEVINGK-PYDYKADIWSLGITAI  188 (253)
T ss_pred             cccceecCCcccCHHHHcCC-CCCccccHHHHHHHHH
Confidence            1       112278877653 4778899999965543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=225.01  Aligned_cols=194  Identities=22%  Similarity=0.306  Sum_probs=160.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK---YAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      ....+.++|-++..||+|+|+.||+|.+....+.||||+-......+   .....+...||..|.+.| +||.||++|++
T Consensus       457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDy  535 (775)
T KOG1151|consen  457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDY  535 (775)
T ss_pred             cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeee
Confidence            34567889999999999999999999999999999999754332221   123455678999999999 79999999999


Q ss_pred             eec-CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--CcccccCCCCcceeeccCCCCcEEEE
Q 042392           96 HED-ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM--GVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        96 ~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      |.- .+.+|-|+|||+|.+|.-+++....+++.+++.|+-||+.||.||.+.  .|||-||||.|||+...+..|.+||+
T Consensus       536 fslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  536 FSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             eeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence            974 467899999999999988998888899999999999999999999965  59999999999999887888999999


Q ss_pred             ecCCcccccccCCCCC---------------CChHHHHH---HHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGGEAS---------------DDTSVILR---MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~~~~---------------~~pe~~~~---~~~~~~~~d~~s~~~~~  213 (436)
                      |||+++.+..+.....               .+||.+.-   ....+.++|+||+|+.+
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF  674 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF  674 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence            9999999876443311               16666552   23467789999985543

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.95  E-value=5.3e-29  Score=214.78  Aligned_cols=186  Identities=20%  Similarity=0.181  Sum_probs=152.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.++.+-+..||.|+||+|++-.++.+|+..|||.++.....   ....+++.|.....+-++.||||++|++...++..
T Consensus        62 ~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc  138 (361)
T KOG1006|consen   62 TSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC  138 (361)
T ss_pred             ccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence            334455577899999999999999999999999999876542   34567888888777766899999999999999999


Q ss_pred             EEEEeccCCCChHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          103 HVVMELCQGGDLFDRII-----AKGYYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ||.||+++- +|..+-+     ....++|...-.+....+.||.||- ...|+|||+||+|||+   +..|.+||||||.
T Consensus       139 WiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGI  214 (361)
T KOG1006|consen  139 WICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGI  214 (361)
T ss_pred             eeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccc
Confidence            999999965 6644332     2356899999999999999999998 4689999999999999   8889999999999


Q ss_pred             cccccccCCC-------CCCChHHHHHHHH-HHHhhhhhhHHHHHHH
Q 042392          177 ALLFEEEGGE-------ASDDTSVILRMKQ-FRRMSKLKKLTVKVIV  215 (436)
Q Consensus       177 a~~~~~~~~~-------~~~~pe~~~~~~~-~~~~~d~~s~~~~~~~  215 (436)
                      +-.+..+-..       ...|||-+..... |.-.||+||+|++++.
T Consensus       215 cGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~E  261 (361)
T KOG1006|consen  215 CGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYE  261 (361)
T ss_pred             hHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEee
Confidence            9876543222       2338998876655 9999999999887653

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.95  E-value=7.9e-27  Score=215.25  Aligned_cols=183  Identities=23%  Similarity=0.370  Sum_probs=147.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      +|.+.+.||+|+||.||+|.+..++..+++|++....... .......+.+|+.+++.+ +||||+++++++......++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence            6899999999999999999998887778888765433211 112334567899999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          105 VMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |+||+++++|.+++..    ...+++..++.++.|++.|+.|||+.|++|+||+|+||++   + ++.++|+|||++...
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili---~-~~~~~l~d~g~~~~~  155 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL---K-NNLLKIGDFGVSRLL  155 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe---e-cCCEeecccCceeec
Confidence            9999999999988864    2458999999999999999999999999999999999999   3 356999999998766


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .....        ....+||.+.+ ..++.++|+|++|+.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~  196 (260)
T cd08222         156 MGSCDLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILY  196 (260)
T ss_pred             CCCcccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHH
Confidence            43211        11227887654 45677899999965543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=1.1e-25  Score=208.66  Aligned_cols=184  Identities=21%  Similarity=0.297  Sum_probs=149.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECC-CCceEEEEEeecCCcc------chhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENS-TNMPYACKSMAKKPKM------KYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~------~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+......      ........+.+|+.++....+||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48889999999999999999987 6889999988643221      1123345567888888763379999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           99 ETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      .+..++||||+++++|.+++..    ...+++..++.++.|++.||.|||+ .+++||||+|+||++   +.++.++|+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence            9999999999999999988754    2458999999999999999999996 789999999999999   6788999999


Q ss_pred             cCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||++........       ....+||.+.+ ..++.++|+||+|+.+
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll  203 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCIL  203 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcC-CCCchHHHHHHHHHHH
Confidence            999987654321       11227887765 4578899999995544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=9.3e-26  Score=206.68  Aligned_cols=175  Identities=33%  Similarity=0.473  Sum_probs=149.2

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||.|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++.+.....+|+||||++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIK-RKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcc-hHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            699999999999998889999999987654332 23455788999999999 5999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC--------
Q 042392          113 DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG--------  184 (436)
Q Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--------  184 (436)
                      +|.+++.....+++..+..++.|++.|+.|||+.+++|+||+|+||++   +.++.++|+|||++.......        
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  155 (250)
T cd05123          79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCG  155 (250)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCCcccCCcC
Confidence            999999888789999999999999999999999999999999999999   677899999999998765431        


Q ss_pred             CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          185 GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       185 ~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....+||...+ ..++..+|+|++|+.+
T Consensus       156 ~~~~~~Pe~~~~-~~~~~~~D~~slG~~~  183 (250)
T cd05123         156 TPEYLAPEVLLG-KGYGKAVDWWSLGVLL  183 (250)
T ss_pred             CccccChHHhCC-CCCCchhhHHHHHHHH
Confidence            112237887765 3467889999995544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=5.3e-26  Score=213.44  Aligned_cols=180  Identities=25%  Similarity=0.326  Sum_probs=149.2

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ..|.....||+|+||.||++.+..++..||||.+....    ......+.+|+.+++.+ +||||+++++++...+..|+
T Consensus        20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   94 (292)
T cd06657          20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWV   94 (292)
T ss_pred             HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEE
Confidence            34555678999999999999999999999999875432    23455688999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      ||||+++++|.+++. .+.+++..++.++.|++.|+.|||+.|++||||+|+||++   +.++.++|+|||++.......
T Consensus        95 v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~  170 (292)
T cd06657          95 VMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEV  170 (292)
T ss_pred             EEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccc
Confidence            999999999988764 4568999999999999999999999999999999999999   677899999999987654322


Q ss_pred             CC--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 GE--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..        ...+||.+.+ ..++.++|+|++|++++
T Consensus       171 ~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~  207 (292)
T cd06657         171 PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVI  207 (292)
T ss_pred             ccccccccCccccCHHHhcC-CCCCchhhHHHHHHHHH
Confidence            11        1237886654 45678999999955443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=9.6e-26  Score=213.88  Aligned_cols=186  Identities=26%  Similarity=0.318  Sum_probs=152.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.+.|...+.||+|+||.||+|++..++..||+|.+....... ......+.+|+.+++.+ +|||++++++++......
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   96 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT-NEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTA   96 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEE
Confidence            3445888899999999999999999999999999987654332 23345678899999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+.+ +|.+++... .++++..+..++.|++.|+.|||+.|++||||+|+||++   +.++.++|+|||++....
T Consensus        97 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633          97 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSS  172 (313)
T ss_pred             EEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccC
Confidence            999999965 888887653 468999999999999999999999999999999999999   677899999999987543


Q ss_pred             ccCCC----CCCChHHHHH--HHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGE----ASDDTSVILR--MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~----~~~~pe~~~~--~~~~~~~~d~~s~~~~~~  214 (436)
                      .....    ...+||.+..  ...++..+|+||+|+.++
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~  211 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  211 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHH
Confidence            32211    2238888753  245788999999965543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.7e-27  Score=209.52  Aligned_cols=206  Identities=20%  Similarity=0.286  Sum_probs=169.8

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..-.+..+|.-++.+|.|.- .|..|.|.-++++||+|.+......  ........+|..++..+ +|+||++++.+|..
T Consensus        11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v-~~~nii~l~n~ftP   86 (369)
T KOG0665|consen   11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCV-NHKNIISLLNVFTP   86 (369)
T ss_pred             cceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc--Cccchhhhhhhhhhhhh-cccceeeeeeccCc
Confidence            44556678999999999998 8888999999999999998766332  34456778999999999 79999999999975


Q ss_pred             CC------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 ET------AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ~~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      ..      .+|+||||+.. +|.+.+.  -.++...+..++.|++.|+.|||+.||+||||||+||++   ..++.+||+
T Consensus        87 ~~~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~  160 (369)
T KOG0665|consen   87 QKTLEEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKIL  160 (369)
T ss_pred             cccHHHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeec
Confidence            43      48999999976 9988887  347788899999999999999999999999999999999   788999999


Q ss_pred             ecCCcccccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCC
Q 042392          173 DFGSALLFEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTD  236 (436)
Q Consensus       173 DFG~a~~~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~  236 (436)
                      |||+|+.-......+       ..|||++.+++ |...+||||. +|++++.+       +...++++.++...++.+
T Consensus       161 dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSv-Gci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp  236 (369)
T KOG0665|consen  161 DFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSV-GCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP  236 (369)
T ss_pred             cchhhcccCcccccCchhheeeccCchheeccC-Ccccchhhhh-hhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence            999998765542211       12999999987 9999999999 88888876       456666666666555543

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=1.3e-26  Score=210.80  Aligned_cols=165  Identities=21%  Similarity=0.222  Sum_probs=136.5

Q ss_pred             cCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCCChH
Q 042392           36 GRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLF  115 (436)
Q Consensus        36 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~  115 (436)
                      |+||.||+|+++.+++.||+|.+.....         ..+|...+... .||||+++++++.....+|+||||++||+|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---------YSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh---------hhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence            8899999999999999999999865431         22344444455 5999999999999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC-----CCCC
Q 042392          116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE-----ASDD  190 (436)
Q Consensus       116 ~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~-----~~~~  190 (436)
                      +++.+...+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++++|||.+.........     ...+
T Consensus        74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~a  150 (237)
T cd05576          74 SHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDSCDGEAVENMYCA  150 (237)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccccccCCcCccccC
Confidence            999887789999999999999999999999999999999999999   67789999999988665442211     1237


Q ss_pred             hHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          191 TSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       191 pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||...+ ..++.++|+||+|++++
T Consensus       151 PE~~~~-~~~~~~~DvwslG~il~  173 (237)
T cd05576         151 PEVGGI-SEETEACDWWSLGAILF  173 (237)
T ss_pred             CcccCC-CCCCchhhHHHHHHHHH
Confidence            876644 45678899999955543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=2.3e-26  Score=218.29  Aligned_cols=172  Identities=19%  Similarity=0.245  Sum_probs=140.2

Q ss_pred             CCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCCChHH
Q 042392           37 RFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD  116 (436)
Q Consensus        37 ~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~  116 (436)
                      ++|.||.+++..+++.||||++......  ......+.+|+.+++.+ +||||+++++++......|++|||+++|+|.+
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   88 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCS--KEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPLMAYGSCED   88 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccc--hhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence            4455666666679999999998765322  23456789999999999 69999999999999999999999999999999


Q ss_pred             HHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---------
Q 042392          117 RIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---------  185 (436)
Q Consensus       117 ~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---------  185 (436)
                      ++...  ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||.+........         
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~  165 (314)
T cd08216          89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP  165 (314)
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeecccccccccccccc
Confidence            99864  358899999999999999999999999999999999999   6778999999998875532211         


Q ss_pred             ------CCCCChHHHHHH-HHHHHhhhhhhHHHHHH
Q 042392          186 ------EASDDTSVILRM-KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~~  214 (436)
                            ....+||.+.+. ..|+.++|+||+|+.++
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~  201 (314)
T cd08216         166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITAC  201 (314)
T ss_pred             ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHH
Confidence                  112378887653 35788999999955543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=1.5e-25  Score=226.51  Aligned_cols=250  Identities=17%  Similarity=0.224  Sum_probs=152.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCC----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENST----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH--   96 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~--   96 (436)
                      -.++|.+.+.||+|+||.||+|++..+    +..||+|.+......      .....+ . ++.. .+.+++.+...+  
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~------e~~~~e-~-l~~~-~~~~~~~~~~~~~~  200 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV------EIWMNE-R-VRRA-CPNSCADFVYGFLE  200 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh------HHHHHH-H-HHhh-chhhHHHHHHhhhc
Confidence            456899999999999999999999988    899999987543211      111111 1 1111 133333332221  


Q ss_pred             ----ecCCeEEEEEeccCCCChHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCccccc
Q 042392           97 ----EDETAVHVVMELCQGGDLFDRIIAKGY--------------------YSERDAAPVLRAIVNAVNVCHSMGVMHRD  152 (436)
Q Consensus        97 ----~~~~~~~iv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~~~~qi~~~l~~lH~~~i~Hrd  152 (436)
                          .....+++|+||+++++|.+++.....                    .....+..++.||+.||.|||+++|+|||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence                345679999999999999999875421                    11334668999999999999999999999


Q ss_pred             CCCCcceeeccCCCCcEEEEecCCcccccccCC---------CCCCChHHHHHHH---------------------HHHH
Q 042392          153 LKPENFCFISRDDNALLKVTDFGSALLFEEEGG---------EASDDTSVILRMK---------------------QFRR  202 (436)
Q Consensus       153 lkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---------~~~~~pe~~~~~~---------------------~~~~  202 (436)
                      |||+|||+.  ...+.+||+|||+|+.+.....         ....+||.+....                     .+..
T Consensus       281 LKP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~  358 (566)
T PLN03225        281 VKPQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD  358 (566)
T ss_pred             CCHHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence            999999993  2357899999999986543211         1223788664321                     1234


Q ss_pred             hhhhhhHHHHHHHhcC-----ChhhHHHHHHHhhhhCCCCCC------ccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcC
Q 042392          203 MSKLKKLTVKVIVEYL-----PGEETQALKEKFIEMDTDKNG------TLSYDELRAGLTKVGSMLTEFDVKQLMEAADM  271 (436)
Q Consensus       203 ~~d~~s~~~~~~~~~l-----~~e~~~~l~~~F~~~D~~~~g------~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~  271 (436)
                      ++|+||+|+++ .+.+     .......+...+...+.+...      .....++...+..+. .......+.+-+++..
T Consensus       359 k~DVwSlGviL-~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~dLi~~mL~~  436 (566)
T PLN03225        359 RFDIYSAGLIF-LQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLD-LDGGAGWELLKSMMRF  436 (566)
T ss_pred             CcccHHHHHHH-HHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhcc-ccchHHHHHHHHHccC
Confidence            56999995554 4433     222333333333332211000      000001111111111 0111223455566778


Q ss_pred             CCCCcccHHHHHHH
Q 042392          272 DGNGAIDYTEFTAA  285 (436)
Q Consensus       272 d~~g~i~~~EF~~~  285 (436)
                      |+..|++..+.+.+
T Consensus       437 dP~kR~ta~e~L~H  450 (566)
T PLN03225        437 KGRQRISAKAALAH  450 (566)
T ss_pred             CcccCCCHHHHhCC
Confidence            88889998888765

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=3e-26  Score=216.89  Aligned_cols=156  Identities=19%  Similarity=0.193  Sum_probs=125.1

Q ss_pred             ccccccccccccccceeeeeeecccCCeEEEEEEECC-CCceEEEEEeecCCcc-chhhHHHHHHHHHHHHHhcCCCCCe
Q 042392           12 RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENS-TNMPYACKSMAKKPKM-KYAENDMMIRREIQIRRLLSGQPNI   89 (436)
Q Consensus        12 ~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni   89 (436)
                      -.|..+++-..+..+|++.+.||+|+||+||+|.+.. +++.||||++...... ........+.+|+.+|+.+ +|+||
T Consensus         5 ~~~~~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~i   83 (365)
T PRK09188          5 DVPLPGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGV   83 (365)
T ss_pred             CCCCcccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCC
Confidence            4566677888899999999999999999999999876 6788899987533110 1123456789999999999 59999


Q ss_pred             ee-ceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccC-CCCcceeeccCCCC
Q 042392           90 VE-LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDL-KPENFCFISRDDNA  167 (436)
Q Consensus        90 v~-~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdl-kp~Nill~~~~~~~  167 (436)
                      +. +++.    +..|+|||||+|++|.. +.   ...   ...++.|++.+|.|||++||+|||| ||+|||+   +.++
T Consensus        84 v~~l~~~----~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~  149 (365)
T PRK09188         84 VPQLLAT----GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDG  149 (365)
T ss_pred             CcEEEEc----CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCC
Confidence            85 5443    45899999999999963 21   111   1467899999999999999999999 9999999   6678


Q ss_pred             cEEEEecCCcccccc
Q 042392          168 LLKVTDFGSALLFEE  182 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~  182 (436)
                      .+||+|||+|+.+..
T Consensus       150 ~ikLiDFGlA~~~~~  164 (365)
T PRK09188        150 EAAVIDFQLASVFRR  164 (365)
T ss_pred             CEEEEECccceeccc
Confidence            899999999998754

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.8e-27  Score=227.11  Aligned_cols=186  Identities=21%  Similarity=0.212  Sum_probs=157.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .-...++.++.+.||+|+||.|++|.|...   ...||||++......   .....+++|+.+|.+| .|||++++|++.
T Consensus       105 clIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L-~H~hliRLyGvV  180 (1039)
T KOG0199|consen  105 CLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKL-QHPHLIRLYGVV  180 (1039)
T ss_pred             eeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhc-cCcceeEEeeee
Confidence            344556788899999999999999998753   347999999766543   2566799999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      .+ ..+.+|||+++.|+|.+.|.+.  ..+.......|+.||+.|+.||.++++|||||-..|+|+   .....||||||
T Consensus       181 l~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlll---asprtVKI~DF  256 (1039)
T KOG0199|consen  181 LD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLL---ASPRTVKICDF  256 (1039)
T ss_pred             cc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhee---cccceeeeecc
Confidence            87 7789999999999999999873  347788899999999999999999999999999999999   55678999999


Q ss_pred             CCcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          175 GSALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       175 G~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+.+.+......           +.++||.+.. ..|+.+||+|++|+++.
T Consensus       257 GLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiW  306 (1039)
T KOG0199|consen  257 GLMRALGENEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIW  306 (1039)
T ss_pred             cceeccCCCCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHH
Confidence            999988654322           2338888876 68999999999977764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.9e-26  Score=223.70  Aligned_cols=179  Identities=22%  Similarity=0.298  Sum_probs=150.1

Q ss_pred             eeeeeeecccCCeEEEEEEECCCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTN----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .+..++||+|+||+||+|.+...|    .+||||++......   .....++.|+-+|..| +|||+++++++...+. +
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~---~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~  772 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP---KASIELLDEALRMASL-DHPNLLRLLGVCMLST-L  772 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc---hhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-H
Confidence            445788999999999999987655    47899988765443   3456789999999999 7999999999998766 8


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      .||++|+++|+|.++++.. .++.......|..||++|+.|||.++++||||-.+|+|+   .+...+||.|||+|+.+.
T Consensus       773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccC
Confidence            8999999999999999875 468889999999999999999999999999999999999   677799999999999987


Q ss_pred             ccCCCCCC----------ChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGEASD----------DTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~~~~----------~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ........          |-|.+ +...|+..||+|++|+++.
T Consensus       850 ~d~~ey~~~~gK~pikwmale~i-~~~~~thqSDVWsfGVtiW  891 (1177)
T KOG1025|consen  850 PDEKEYSAPGGKVPIKWMALESI-RIRKYTHQSDVWSFGVTIW  891 (1177)
T ss_pred             cccccccccccccCcHHHHHHHh-hccCCCchhhhhhhhhhHH
Confidence            76544322          22222 3357899999999987764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.1e-26  Score=208.16  Aligned_cols=188  Identities=18%  Similarity=0.297  Sum_probs=151.4

Q ss_pred             cccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-CCCCe
Q 042392           11 QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQPNI   89 (436)
Q Consensus        11 ~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~ni   89 (436)
                      +..|.+  ....+..+.++.+.||+|.||.||+|.+.  |+.||||++...       .+..+.||.+|.+..- .|+||
T Consensus       199 SGlplL--VQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENI  267 (513)
T KOG2052|consen  199 SGLPLL--VQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENI  267 (513)
T ss_pred             CCchhH--hHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc-------chhhhhhHHHHHHHHHhccchh
Confidence            345543  33568888999999999999999999985  889999999643       3566888888887522 69999


Q ss_pred             eeceeeeecC----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccccCCCCc
Q 042392           90 VELKSAHEDE----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM--------GVMHRDLKPEN  157 (436)
Q Consensus        90 v~~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~Hrdlkp~N  157 (436)
                      ..+++.-...    ..+|+|++|.+.|+|+++|.+ ..++...+..++..+++||++||..        .|.|||||..|
T Consensus       268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN  346 (513)
T KOG2052|consen  268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN  346 (513)
T ss_pred             hhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence            9999876543    248999999999999999988 5589999999999999999999952        49999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCCC------------CCCChHHHHHHH---HHH--HhhhhhhHHHHH
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGGE------------ASDDTSVILRMK---QFR--RMSKLKKLTVKV  213 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~~------------~~~~pe~~~~~~---~~~--~~~d~~s~~~~~  213 (436)
                      ||+   ..++.+.|+|+|+|....+....            ...|||++...-   .|.  ...|||++|+.+
T Consensus       347 ILV---Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl  416 (513)
T KOG2052|consen  347 ILV---KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL  416 (513)
T ss_pred             EEE---ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence            999   78999999999999877654211            122999988543   332  578999997654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-27  Score=203.06  Aligned_cols=196  Identities=21%  Similarity=0.301  Sum_probs=158.3

Q ss_pred             cccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           13 YPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        13 ~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      .|-...+.-.+.+.|.+.+.||+|.||.+.+|+|+.++..+++|.++...     .....+.+|..---.|+.|.||+..
T Consensus        12 I~~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~t   86 (378)
T KOG1345|consen   12 IPMEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDT   86 (378)
T ss_pred             cccccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHH
Confidence            34444455667888999999999999999999999999999999997653     3456788998876677789999998


Q ss_pred             ee-eeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           93 KS-AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        93 ~~-~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      |+ .|++.+.+..++||||.|+|..-+...| +.|.....++.|+++|+.|+|+.++||||||.+|||+-.. +..+|||
T Consensus        87 Y~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKl  164 (378)
T KOG1345|consen   87 YEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKL  164 (378)
T ss_pred             HHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEe
Confidence            87 5788899999999999999988775543 8899999999999999999999999999999999999763 4569999


Q ss_pred             EecCCccccccc-----CCCCCCChHHHHHHHH----HHHhhhhhhHHHHHHH
Q 042392          172 TDFGSALLFEEE-----GGEASDDTSVILRMKQ----FRRMSKLKKLTVKVIV  215 (436)
Q Consensus       172 ~DFG~a~~~~~~-----~~~~~~~pe~~~~~~~----~~~~~d~~s~~~~~~~  215 (436)
                      ||||.++.....     ......+||++.....    ..+..|+|.+|+.++.
T Consensus       165 cDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  165 CDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             eecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence            999999876432     1123337777664432    3467899999765543

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=6.2e-25  Score=224.12  Aligned_cols=254  Identities=20%  Similarity=0.222  Sum_probs=197.6

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEEC----C---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTEN----S---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ   86 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h   86 (436)
                      |... .|+...++..+.+.||+|.||.|++|.-.    .   ....||||.++.....   .....+..|+.+|+.+..|
T Consensus       286 ~~~~-~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~---~~~~~~~~El~~m~~~g~H  361 (609)
T KOG0200|consen  286 PEDP-KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS---SEKKDLMSELNVLKELGKH  361 (609)
T ss_pred             CcCC-ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc---HHHHHHHHHHHHHHHhcCC
Confidence            4444 67777777888889999999999999743    1   1467999998765432   4567889999999999889


Q ss_pred             CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        87 ~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      |||+.+++++..++.+++|+|||..|+|..+++..+                .++......+..||+.|+.||++.+++|
T Consensus       362 ~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vH  441 (609)
T KOG0200|consen  362 PNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVH  441 (609)
T ss_pred             cchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence            999999999999999999999999999999998866                3788899999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCC------C--C---CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG------E--A---SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP  219 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~------~--~---~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~  219 (436)
                      |||-.+|||+   ..+..+||+|||+|+.......      .  .   ..|||.+.. ..|+.++|+||+|+++      
T Consensus       442 RDLAaRNVLi---~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L------  511 (609)
T KOG0200|consen  442 RDLAARNVLI---TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILL------  511 (609)
T ss_pred             hhhhhhhEEe---cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHH------
Confidence            9999999999   6778999999999995433111      0  1   228999988 7899999999997744      


Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                             .++|..-+.+-.|.....++.+.++.=     ....+.+-...|-.....+...|.+|.+-...+..
T Consensus       512 -------~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  512 -------WEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             -------HHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence                   355555444444544467776666541     12334444455555667788899999988776544

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.8e-25  Score=207.43  Aligned_cols=225  Identities=20%  Similarity=0.262  Sum_probs=166.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-CCCCeeeceeeeecCC---
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQPNIVELKSAHEDET---  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~~~~~---  100 (436)
                      ...++.++||+|.||.||+|..  +++.||||+++..       ..+.+.+|-+|..... .|+||++++++-....   
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~-------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ-------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR  280 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH-------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence            4577889999999999999985  5699999999643       3456778877776542 6999999999876554   


Q ss_pred             -eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------cCcccccCCCCcceeeccCCCCcEE
Q 042392          101 -AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS---------MGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       101 -~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---------~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                       .+++|++|.+.|+|.++++.. .++.....+++..+++||+|||+         ..|+|||||..|||+   .++.++.
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTcc  356 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCC  356 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEE
Confidence             799999999999999999875 48999999999999999999996         359999999999999   7889999


Q ss_pred             EEecCCcccccccCCC----------CCCChHHHHHHHHHH-----HhhhhhhHHHHHHHhcCChhhHHHHHHHhhhh-C
Q 042392          171 VTDFGSALLFEEEGGE----------ASDDTSVILRMKQFR-----RMSKLKKLTVKVIVEYLPGEETQALKEKFIEM-D  234 (436)
Q Consensus       171 l~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~-----~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~-D  234 (436)
                      |+|||+|..+......          ...|||++.+.-.+.     ...|++++|+.+.             +++... |
T Consensus       357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLW-------------Ei~SRC~~  423 (534)
T KOG3653|consen  357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLW-------------EIASRCTD  423 (534)
T ss_pred             eeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHH-------------HHHhhccc
Confidence            9999999988753322          122999998776554     5779999855432             233222 1


Q ss_pred             CCCCCccCHHHHHHHH-HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHH
Q 042392          235 TDKNGTLSYDELRAGL-TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF  282 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l-~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF  282 (436)
                      .++ |.+.  +.+.-+ ..+|.+|+.+++..+.-.-    .+|..|-++
T Consensus       424 ~~~-~~vp--~Yqlpfe~evG~hPt~e~mq~~VV~k----K~RP~~p~~  465 (534)
T KOG3653|consen  424 ADP-GPVP--EYQLPFEAEVGNHPTLEEMQELVVRK----KQRPKIPDA  465 (534)
T ss_pred             ccC-CCCC--cccCchhHHhcCCCCHHHHHHHHHhh----ccCCCChhh
Confidence            211 2221  122222 2578888877776654442    344444443

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.93  E-value=2.5e-26  Score=214.80  Aligned_cols=185  Identities=18%  Similarity=0.224  Sum_probs=159.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-----CCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-----GQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~   94 (436)
                      .+.+..+|.+....|+|-||+|..|.+...|..||||+|.....     +.+.=++|+++|++|.     +--|+++++.
T Consensus       427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r  501 (752)
T KOG0670|consen  427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-----MHKTGLKELEILKKLNDADPEDKFHCLRLFR  501 (752)
T ss_pred             hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-----HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence            56678899999999999999999999999999999999976543     3455678999999995     3468999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      .|...+++|+|+|.+.- +|.+++++.+.   +....++.|+.|+..||..|-.+||+|.||||.|||++  .....+||
T Consensus       502 ~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKL  578 (752)
T KOG0670|consen  502 HFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKL  578 (752)
T ss_pred             HhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeee
Confidence            99999999999999965 99999998764   77889999999999999999999999999999999995  34568999


Q ss_pred             EecCCcccccccCCCCCC------ChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          172 TDFGSALLFEEEGGEASD------DTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       172 ~DFG~a~~~~~~~~~~~~------~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||||.|........++..      |||+++|. +|..+.|+||+|+|+
T Consensus       579 CDfGSA~~~~eneitPYLVSRFYRaPEIiLG~-~yd~~iD~WSvgctL  625 (752)
T KOG0670|consen  579 CDFGSASFASENEITPYLVSRFYRAPEIILGL-PYDYPIDTWSVGCTL  625 (752)
T ss_pred             ccCccccccccccccHHHHHHhccCcceeecC-cccCCccceeeceee
Confidence            999999887665544332      99999995 799999999995544

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=7.8e-27  Score=224.15  Aligned_cols=185  Identities=25%  Similarity=0.331  Sum_probs=161.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      +..++|.+++.+|+|+||.||+|+++.+++..|+|+++......    ...+..|+-+++.+ +|||||-+++.|.....
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd----~~~iqqei~~~~dc-~h~nivay~gsylr~dk   86 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD----FSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDK   86 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc----ccccccceeeeecC-CCcChHHHHhhhhhhcC
Confidence            66789999999999999999999999999999999998876543    45678999999999 59999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|++||||.||+|.+.-.-.+++++.++....+..+.|+.|||+.|-+|||||-.||++   ++.+.+|+.|||.+..+.
T Consensus        87 lwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   87 LWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             cEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhh
Confidence            99999999999999988778899999999999999999999999999999999999999   788999999999988765


Q ss_pred             ccCCC--------CCCChHHHH--HHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGGE--------ASDDTSVIL--RMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~~--------~~~~pe~~~--~~~~~~~~~d~~s~~~~~~  214 (436)
                      ..-..        ...+||+-.  +-..|...+|+|+.|.+.+
T Consensus       164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAi  206 (829)
T KOG0576|consen  164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAI  206 (829)
T ss_pred             hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchh
Confidence            42211        122888755  4456889999999875543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=1.8e-24  Score=188.62  Aligned_cols=143  Identities=14%  Similarity=0.125  Sum_probs=111.9

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh----------------------hHHHHHHHHHHHHHhcCCCC
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA----------------------ENDMMIRREIQIRRLLSGQP   87 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~~h~   87 (436)
                      ...||+|+||.||+|.+. +|+.||||+++........                      .......+|+.+++.+ .++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTA   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHC
Confidence            568999999999999986 8999999999765321100                      0122345699999999 477


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCcccccCCCCcceeeccCCC
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC-HSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l-H~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      ++.....+...  ..++||||++|+++.......++++...+..++.|++.+|.++ |+.||+||||||+|||+   + +
T Consensus        80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli---~-~  153 (190)
T cd05147          80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY---H-D  153 (190)
T ss_pred             CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---E-C
Confidence            77544333222  2389999999887766555556799999999999999999999 79999999999999999   3 3


Q ss_pred             CcEEEEecCCcccc
Q 042392          167 ALLKVTDFGSALLF  180 (436)
Q Consensus       167 ~~~kl~DFG~a~~~  180 (436)
                      +.++|+|||+|...
T Consensus       154 ~~v~LiDFG~a~~~  167 (190)
T cd05147         154 GKLYIIDVSQSVEH  167 (190)
T ss_pred             CcEEEEEccccccC
Confidence            68999999999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.91  E-value=1.5e-23  Score=183.45  Aligned_cols=146  Identities=13%  Similarity=0.104  Sum_probs=114.6

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----------------------hhHHHHHHHHHHHHHhcCCC
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----------------------AENDMMIRREIQIRRLLSGQ   86 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~~h   86 (436)
                      +.+.||+|+||.||+|.+. +|+.||||++........                      ........+|...+..+ .|
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YE   78 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-Hh
Confidence            3578999999999999987 899999999886532100                      00122346899999999 58


Q ss_pred             CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCC
Q 042392           87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDD  165 (436)
Q Consensus        87 ~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~  165 (436)
                      ++|.....+....  .|+||||++|+++........+++...+..++.|++.++.++|+ .||+||||||+||++   + 
T Consensus        79 ~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll---~-  152 (190)
T cd05145          79 AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY---H-  152 (190)
T ss_pred             CCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE---E-
Confidence            8875544443332  48999999987665443345668889999999999999999999 999999999999999   4 


Q ss_pred             CCcEEEEecCCcccccc
Q 042392          166 NALLKVTDFGSALLFEE  182 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~  182 (436)
                      ++.++|+|||+|.....
T Consensus       153 ~~~~~liDFG~a~~~~~  169 (190)
T cd05145         153 DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             CCCEEEEEcccceecCC
Confidence            67899999999987644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=8.2e-24  Score=229.99  Aligned_cols=178  Identities=19%  Similarity=0.240  Sum_probs=142.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +...|.....||+|+||.||+|++..++..||||.+......        ...|+++++.+ +|||||++++++......
T Consensus       688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI--------PSSEIADMGKL-QHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc--------cHHHHHHHhhC-CCCCcceEEEEEEcCCCC
Confidence            345577788999999999999999999999999988643211        13568889999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH---SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      |+||||+++|+|.+++..   +++..+..++.|++.|+.|||   +.+|+||||||+||++   +.++.++++ ||.+..
T Consensus       759 ~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~  831 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGL  831 (968)
T ss_pred             EEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccc
Confidence            999999999999999853   788999999999999999999   6699999999999999   566666665 666544


Q ss_pred             ccccCC----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          180 FEEEGG----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       180 ~~~~~~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ......    ....|||.+.+ ..|+.++|+||+|+. +.+.+
T Consensus       832 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvv-l~el~  872 (968)
T PLN00113        832 LCTDTKCFISSAYVAPETRET-KDITEKSDIYGFGLI-LIELL  872 (968)
T ss_pred             cccCCCccccccccCcccccC-CCCCcccchhhHHHH-HHHHH
Confidence            322211    22338888765 568899999999554 44443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.91  E-value=2.9e-23  Score=186.68  Aligned_cols=181  Identities=36%  Similarity=0.554  Sum_probs=153.7

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |.+.+.||.|++|.||+|.+..+++.+|+|.+......   .....+.+|+..++.+ +|+|++++++++......++++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~   76 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVM   76 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEE
Confidence            67789999999999999999888999999998765422   1456788999999999 6999999999999889999999


Q ss_pred             eccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-
Q 042392          107 ELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-  184 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-  184 (436)
                      |++++++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|.||++   +..+.++|+|||.+....... 
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCccc
Confidence            99999999999988766 8999999999999999999999999999999999999   666899999999998875542 


Q ss_pred             ---C-----CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 ---G-----EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 ---~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                         .     ....+||.+.....++.++|+|++|++++
T Consensus       154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~  191 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY  191 (225)
T ss_pred             ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence               1     11226777644456677999999966543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.91  E-value=8.2e-25  Score=200.75  Aligned_cols=186  Identities=21%  Similarity=0.303  Sum_probs=155.7

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECC---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ...+.+...|..+..||.|+|++||+|.+..   .++.||+|.+.....      ...+.+|+++|..+.++.||+++.+
T Consensus        29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------p~ri~~El~~L~~~gG~~ni~~~~~  102 (418)
T KOG1167|consen   29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------PSRILNELEMLYRLGGSDNIIKLNG  102 (418)
T ss_pred             hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC------chHHHHHHHHHHHhccchhhhcchh
Confidence            3445677889999999999999999999887   789999999876543      3468899999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ++..++.+.+||||++.-...++...   ++...++.+++.++.||.++|.+|||||||||.|+|.+.  ..+.-.|+||
T Consensus       103 ~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDF  177 (418)
T KOG1167|consen  103 CFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDF  177 (418)
T ss_pred             hhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEec
Confidence            99999999999999999777777654   778999999999999999999999999999999999964  3456789999


Q ss_pred             CCcccccc----------------------------------------------------cCCCCCCChHHHHHHHHHHH
Q 042392          175 GSALLFEE----------------------------------------------------EGGEASDDTSVILRMKQFRR  202 (436)
Q Consensus       175 G~a~~~~~----------------------------------------------------~~~~~~~~pe~~~~~~~~~~  202 (436)
                      |+|.....                                                    .+.....+||++.+...-+.
T Consensus       178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt  257 (418)
T KOG1167|consen  178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT  257 (418)
T ss_pred             hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence            99972211                                                    00000118999999998999


Q ss_pred             hhhhhhHHHHHH
Q 042392          203 MSKLKKLTVKVI  214 (436)
Q Consensus       203 ~~d~~s~~~~~~  214 (436)
                      ++|+||.|+.++
T Consensus       258 aiDiws~GVI~L  269 (418)
T KOG1167|consen  258 AIDIWSAGVILL  269 (418)
T ss_pred             ccceeeccceee
Confidence            999999866543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.91  E-value=1e-22  Score=180.65  Aligned_cols=175  Identities=35%  Similarity=0.518  Sum_probs=147.0

Q ss_pred             ecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCC
Q 042392           33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGG  112 (436)
Q Consensus        33 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g  112 (436)
                      ||+|++|.||+|.+..+++.+++|++.......   ....+.+|+..++.+ .|++|+++++++......++++|+++++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCC
Confidence            689999999999998889999999987654321   345788999999999 5999999999999999999999999989


Q ss_pred             ChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC-CCcEEEEecCCcccccccC------
Q 042392          113 DLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSALLFEEEG------  184 (436)
Q Consensus       113 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~-~~~~kl~DFG~a~~~~~~~------  184 (436)
                      +|.+++... ..++...++.++.+++.++.+||+.|++|+||+|.||++   +. .+.++|+|||.+.......      
T Consensus        77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~  153 (215)
T cd00180          77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNGKVKLADFGLSKLLTSDKSLLKTI  153 (215)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE---eCCCCcEEEecCCceEEccCCcchhhcc
Confidence            999999876 468999999999999999999999999999999999999   55 6899999999998765442      


Q ss_pred             --CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          185 --GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       185 --~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        .....+||.+.....++...|+|++|.+++
T Consensus       154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~  185 (215)
T cd00180         154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILY  185 (215)
T ss_pred             cCCCCccChhHhcccCCCCchhhhHHHHHHHH
Confidence              112227777765436678899999855443

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.91  E-value=2.4e-23  Score=205.53  Aligned_cols=155  Identities=19%  Similarity=0.230  Sum_probs=116.7

Q ss_pred             cccceeeeeeecccCCeEEEEEEEC----------------CCCceEEEEEeecCCccchhh----------HHHHHHHH
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTEN----------------STNMPYACKSMAKKPKMKYAE----------NDMMIRRE   76 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~~aiK~~~~~~~~~~~~----------~~~~~~~E   76 (436)
                      -.++|.+.++||+|+||.||+|...                ..++.||||.+..........          .......|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999999999752                235679999986432111000          11123346


Q ss_pred             HHHHHhcCCCCC-----eeeceeeeec--------CCeEEEEEeccCCCChHHHHHHcC---------------------
Q 042392           77 IQIRRLLSGQPN-----IVELKSAHED--------ETAVHVVMELCQGGDLFDRIIAKG---------------------  122 (436)
Q Consensus        77 ~~~l~~l~~h~n-----iv~~~~~~~~--------~~~~~iv~e~~~~g~L~~~l~~~~---------------------  122 (436)
                      +.++..+. |.+     ++++++++..        .+..|+|+||+++++|.+++....                     
T Consensus       223 ~~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~  301 (507)
T PLN03224        223 AYMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM  301 (507)
T ss_pred             HHHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence            77777774 444     4667776643        356899999999999999886421                     


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          123 ---YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       123 ---~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                         .+++..++.++.|++.+|.|||+.+|+||||||+|||+   +.++.+||+|||++....
T Consensus       302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccc
Confidence               13456788899999999999999999999999999999   677899999999997653

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.90  E-value=1.9e-23  Score=178.18  Aligned_cols=190  Identities=21%  Similarity=0.247  Sum_probs=152.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+..+|++++.||+|+||.+|.|....+|..||||+-......      ..+..|..+.+.|++-+.|+++..++...
T Consensus        10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h------pqL~yEskvY~iL~~g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen   10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH------PQLLYESKVYRILQGGVGIPHIRHYGTEK   83 (341)
T ss_pred             hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC------cchhHHHHHHHHhccCCCCchhhhhcccc
Confidence            345677899999999999999999999999999999987655443      35788999999998778999999999998


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..-.+||++. |.+|.++..-.. .++...+..++-|++.-+.|+|.++++||||||+|+|++-......+.++|||+|+
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence            9899999998 779999887653 49999999999999999999999999999999999999766667789999999999


Q ss_pred             cccccCCCCC-----------C---Ch-HHHHHHHHHHHhhhhhhHHHHHHHhc
Q 042392          179 LFEEEGGEAS-----------D---DT-SVILRMKQFRRMSKLKKLTVKVIVEY  217 (436)
Q Consensus       179 ~~~~~~~~~~-----------~---~p-e~~~~~~~~~~~~d~~s~~~~~~~~~  217 (436)
                      .+.+......           +   |. ....+ ..-+...|+-|+|-+++..+
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfn  215 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFN  215 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeee
Confidence            8765322110           0   11 11122 23356778888766665443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.90  E-value=2e-24  Score=212.79  Aligned_cols=257  Identities=20%  Similarity=0.256  Sum_probs=174.7

Q ss_pred             eeeeeeecccCCeE-EEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           27 YSFGRMLGRGRFGV-TYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        27 y~~~~~lg~G~~g~-V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      |.-.+++|.|+-|+ ||+|..  .|+.||||.+..       +....+.||++.|+.-..|||||++|+.-.++..+||.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~-------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa  581 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE-------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA  581 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHhh-------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence            34467799999984 799986  588999998753       34456889999999988899999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCC-C---CHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC--CCCcEEEEecCCccc
Q 042392          106 MELCQGGDLFDRIIAKGY-Y---SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD--DNALLKVTDFGSALL  179 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~-~---~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~--~~~~~kl~DFG~a~~  179 (436)
                      .|+|.. +|.+++...+. +   ..-..+..+.|++.||++||+.+||||||||+||||...+  ...+++|+|||+++.
T Consensus       582 lELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  582 LELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             ehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            999976 99999987421 1   1134578999999999999999999999999999997542  335789999999998


Q ss_pred             ccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhH---HHHHHHhhhhCCCCCCccCHHH
Q 042392          180 FEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEET---QALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       180 ~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~---~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +......           ...|||++..... +.++||.|+ +|++.+.++.-..   +.+.+--+.+.    |..+   
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFsl-GCvfyYvltgG~HpFGd~~~R~~NIl~----~~~~---  731 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSL-GCVFYYVLTGGSHPFGDSLERQANILT----GNYT---  731 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhcccc-Ccccchhhc-CceEEEEecCCccCCCchHHhhhhhhc----Cccc---
Confidence            8653221           1229999987543 569999999 7776665522100   00000000000    1100   


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhC
Q 042392          246 LRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFD  306 (436)
Q Consensus       246 L~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D  306 (436)
                          +..+......+..+.+-+++..++..|.+-.+.+.+-...........++.+=..++
T Consensus       732 ----L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~Fl~dvSDRvE  788 (903)
T KOG1027|consen  732 ----LVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLSFLRDVSDRVE  788 (903)
T ss_pred             ----eeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHHHHHhhhhhhh
Confidence                011111111133444555677888888888888776444443333334444433333

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.90  E-value=1.7e-23  Score=184.40  Aligned_cols=172  Identities=16%  Similarity=0.103  Sum_probs=134.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHH------HHHHHHHHHhcCCCCCeeeceee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM------IRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~------~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      .+..+|++.++||.|+||.||++..  ++..+|||++....... +.....      +.+|++.+..| .||+|+.+.++
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~-~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~  103 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRT-ERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDF  103 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCch-HHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEe
Confidence            4667899999999999999999765  47789999997654433 222222      67999999999 69999999988


Q ss_pred             eecC--------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           96 HEDE--------TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        96 ~~~~--------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      +...        +..++||||++|.+|.++.    .+++    ....+++.++..+|..|++|||+||+||++   +.++
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili---~~~g  172 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV---SKNG  172 (232)
T ss_pred             eeecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE---eCCC
Confidence            6643        3589999999999997763    2333    346699999999999999999999999999   5566


Q ss_pred             cEEEEecCCcccccccCCCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          168 LLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                       ++|+|||.+......     .+...+.-.+.|..++|+|++|++++
T Consensus       173 -i~liDfg~~~~~~e~-----~a~d~~vler~y~~~~di~~lg~~~~  213 (232)
T PRK10359        173 -LRIIDLSGKRCTAQR-----KAKDRIDLERHYGIKNEIKDLGYYLL  213 (232)
T ss_pred             -EEEEECCCcccccch-----hhHHHHHHHhHhcccccccceeEeeh
Confidence             999999988765322     13344555567778999999987765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=3.6e-22  Score=181.46  Aligned_cols=170  Identities=37%  Similarity=0.548  Sum_probs=144.3

Q ss_pred             CCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEeccCCCChHH
Q 042392           37 RFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD  116 (436)
Q Consensus        37 ~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~  116 (436)
                      +||.||+|.+..+++.+|+|++.......   ....+.+|+..++.+ +||||+++++.+......++++||+++++|..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK---KRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFD   76 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEeccccccc---HHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHH
Confidence            58999999999889999999987654322   146788999999999 79999999999999899999999999999999


Q ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC-------CCCCC
Q 042392          117 RIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-------GEASD  189 (436)
Q Consensus       117 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~~  189 (436)
                      ++.....++...++.++.+++.++.|||+.+++|+||+|.||++   +.++.++|+|||.+.......       .....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
T smart00220       77 LLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM  153 (244)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccccccccccCCcCCC
Confidence            99877668999999999999999999999999999999999999   667899999999998775531       11122


Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +||...+ ..++.++|+|++|..++
T Consensus       154 ~pE~~~~-~~~~~~~Di~slG~~l~  177 (244)
T smart00220      154 APEVLLG-KGYGKAVDVWSLGVILY  177 (244)
T ss_pred             CHHHHcc-CCCCchhhHHHHHHHHH
Confidence            7887764 45678999999965543

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.89  E-value=1.2e-22  Score=165.90  Aligned_cols=146  Identities=31%  Similarity=0.492  Sum_probs=133.0

Q ss_pred             HHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hh
Q 042392          214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KL  292 (436)
Q Consensus       214 ~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~  292 (436)
                      ...+++.+++++++++|..+|.+++|.|+..+|.++++.+|..+++.++..++..+|. +++.|+|.+|+..+.... ..
T Consensus        10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~   88 (160)
T COG5126          10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG   88 (160)
T ss_pred             hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC
Confidence            3456799999999999999999999999999999999999999999999999999999 999999999999987765 56


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...++++++|+.||+|++|+|+..+|..++.++                   ++++++++++++++.+|.|++|.|+|++
T Consensus        89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-------------------ge~~~deev~~ll~~~d~d~dG~i~~~e  149 (160)
T COG5126          89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSL-------------------GERLSDEEVEKLLKEYDEDGDGEIDYEE  149 (160)
T ss_pred             CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-------------------cccCCHHHHHHHHHhcCCCCCceEeHHH
Confidence            678999999999999999999999998764433                   7788889999999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+..+..
T Consensus       150 F~~~~~~  156 (160)
T COG5126         150 FKKLIKD  156 (160)
T ss_pred             HHHHHhc
Confidence            9997754

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.89  E-value=6.5e-23  Score=167.48  Aligned_cols=126  Identities=27%  Similarity=0.418  Sum_probs=113.1

Q ss_pred             hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          291 KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       291 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ..++.++++++|..||.|++|.|+..+|..+++++                   +..+++.++.+++..+|. ++|.|+|
T Consensus        15 t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~l-------------------g~~~s~~ei~~l~~~~d~-~~~~idf   74 (160)
T COG5126          15 TEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSL-------------------GFNPSEAEINKLFEEIDA-GNETVDF   74 (160)
T ss_pred             CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHc-------------------CCCCcHHHHHHHHHhccC-CCCccCH
Confidence            34567889999999999999999999998775544                   666778899999999999 9999999


Q ss_pred             HHHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      .+|+.+|..... ...++++++||+.||+|+||+|+..||+++|+++|+. +++|++.||+.+|.|+|
T Consensus        75 ~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~d  142 (160)
T COG5126          75 PEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGD  142 (160)
T ss_pred             HHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCC
Confidence            999999987764 4457899999999999999999999999999999999 99999999999998775

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=1.9e-22  Score=177.43  Aligned_cols=139  Identities=20%  Similarity=0.197  Sum_probs=109.5

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC----CCCCeeeceeeeecCC---eE
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS----GQPNIVELKSAHEDET---AV  102 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~~~~---~~  102 (436)
                      .+.||+|+||.||.  ++.++.. +||++.....    .....+.+|+.+++.+.    +||||++++++++++.   .+
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence            57899999999995  7777665 6998865432    23456899999999994    3799999999999873   43


Q ss_pred             E-EEEec--cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHcCcccccCCCCcceeeccC-CCCcEEEEecCCc
Q 042392          103 H-VVMEL--CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV-NVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA  177 (436)
Q Consensus       103 ~-iv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l-~~lH~~~i~Hrdlkp~Nill~~~~-~~~~~kl~DFG~a  177 (436)
                      + +|+||  +++|+|.+++.+. .+++.  ..++.|++.++ .|||+++|+||||||+|||+...+ ....++|+||+.+
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            4 78999  5579999999763 46665  35678888777 999999999999999999995432 3458999995544


Q ss_pred             c
Q 042392          178 L  178 (436)
Q Consensus       178 ~  178 (436)
                      .
T Consensus       157 ~  157 (210)
T PRK10345        157 S  157 (210)
T ss_pred             c
Confidence            3

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.88  E-value=2.2e-22  Score=168.73  Aligned_cols=125  Identities=34%  Similarity=0.497  Sum_probs=111.2

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ....+++++|+.||+|++|+|+..||..+++++                   +..+++.++..+++++|.|++|.|+|+|
T Consensus         5 ~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~l-------------------g~~~t~~el~~~~~~~D~dg~g~I~~~e   65 (151)
T KOG0027|consen    5 EQILELKEAFQLFDKDGDGKISVEELGAVLRSL-------------------GQNPTEEELRDLIKEIDLDGDGTIDFEE   65 (151)
T ss_pred             HHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCeEcHHH
Confidence            345679999999999999999999998775444                   5667888999999999999999999999


Q ss_pred             HHHHHHhhhccC-----CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKLE-----TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~~-----~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++.......     ..++++.||++||+||+|+||.+||+++|..+|++ +.++++.|++++|.|+|
T Consensus        66 F~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~d  135 (151)
T KOG0027|consen   66 FLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGD  135 (151)
T ss_pred             HHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCC
Confidence            999998765432     24589999999999999999999999999999999 99999999999999876

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.87  E-value=2.4e-21  Score=162.46  Aligned_cols=143  Identities=32%  Similarity=0.527  Sum_probs=126.6

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc----
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE----  293 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~----  293 (436)
                      ++.++...++.+|..+|++.+|.|+..||..+++.++..++++++..+++..|.+++|.|++.||+..+.......    
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~   81 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE   81 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence            3567788999999999999999999999999999999999999999999999999999999999999887553322    


Q ss_pred             -cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          294 -RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       294 -~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                       ..++++++|+.||+|++|+|+..||+.++..+                   +.+.+.+++..+++.+|.|+||.|+|+|
T Consensus        82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~l-------------------g~~~~~~e~~~mi~~~d~d~dg~i~f~e  142 (151)
T KOG0027|consen   82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSL-------------------GEKLTDEECKEMIREVDVDGDGKVNFEE  142 (151)
T ss_pred             ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHh-------------------CCcCCHHHHHHHHHhcCCCCCCeEeHHH
Confidence             35689999999999999999999998764433                   5555677999999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus       143 f~~~m~~  149 (151)
T KOG0027|consen  143 FVKMMSG  149 (151)
T ss_pred             HHHHHhc
Confidence            9998863

>smart00090 RIO RIO-like kinase

Probab=99.86  E-value=2e-21  Score=175.10  Aligned_cols=147  Identities=14%  Similarity=0.115  Sum_probs=114.7

Q ss_pred             ceeeeeeecccCCeEEEEEE-ECCCCceEEEEEeecCCccc--------------------hhhHHHHHHHHHHHHHhcC
Q 042392           26 HYSFGRMLGRGRFGVTYLCT-ENSTNMPYACKSMAKKPKMK--------------------YAENDMMIRREIQIRRLLS   84 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~   84 (436)
                      -|.+.+.||+|+||.||+|. +..+|+.||||++.......                    .......+.+|+.+++.+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999 67789999999987543210                    0011234678999999994


Q ss_pred             CC--CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC-cccccCCCCcceee
Q 042392           85 GQ--PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG-VMHRDLKPENFCFI  161 (436)
Q Consensus        85 ~h--~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~Hrdlkp~Nill~  161 (436)
                       +  ..++++++.    ...|+||||++|++|..............+..++.|++.++.+||..| |+||||||+||++ 
T Consensus       109 -~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli-  182 (237)
T smart00090      109 -EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV-  182 (237)
T ss_pred             -hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE-
Confidence             4  233444432    235899999999888766544455667778899999999999999999 9999999999999 


Q ss_pred             ccCCCCcEEEEecCCccccc
Q 042392          162 SRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       162 ~~~~~~~~kl~DFG~a~~~~  181 (436)
                        + ++.++|+|||.|....
T Consensus       183 --~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      183 --H-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             --E-CCCEEEEEChhhhccC
Confidence              4 6789999999987653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=4.1e-20  Score=175.48  Aligned_cols=184  Identities=28%  Similarity=0.388  Sum_probs=141.5

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC---CCCCeeeceeee-ecCC
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTN-MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS---GQPNIVELKSAH-EDET  100 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~h~niv~~~~~~-~~~~  100 (436)
                      +|++.+.||+|+||.||.|.+..++ ..+|+|+........    ...+..|+.++..+.   +.++++.+++.+ ....
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~   94 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED   94 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence            8999999999999999999987764 679999876643322    115778888888885   236999999999 5778


Q ss_pred             eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC--CCCcEEEEecCC
Q 042392          101 AVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD--DNALLKVTDFGS  176 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~--~~~~~kl~DFG~  176 (436)
                      .-|+||+.+ |.+|.++....  +.++...+..++.|++.+|.++|+.|++||||||+|+++....  ....+.|.|||+
T Consensus        95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            899999999 77999988655  4699999999999999999999999999999999999996432  125799999999


Q ss_pred             cc--cccccCCC---------------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          177 AL--LFEEEGGE---------------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       177 a~--~~~~~~~~---------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+  .+......               ...++.........++..|+|||+.+++
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~  228 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLL  228 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHH
Confidence            99  32221110               0113333333345567899999855554

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4.9e-21  Score=178.55  Aligned_cols=138  Identities=22%  Similarity=0.291  Sum_probs=119.9

Q ss_pred             cccccc-cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-------CCee
Q 042392           19 PYEDVM-LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-------PNIV   90 (436)
Q Consensus        19 ~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-------~niv   90 (436)
                      ....+. .+|.+.++||.|-|++||+|.|..+.+.||+|+++..     ....+....||.+|++++.+       .+||
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV  145 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-----QHYTEAALDEIKLLQQVREGDPNDPGKKCVV  145 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-----hHHHHHHHHHHHHHHHHHhcCCCCCCCceee
Confidence            455566 8999999999999999999999999999999998754     34456778999999998732       4799


Q ss_pred             eceeeeecC----CeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCCcceeec
Q 042392           91 ELKSAHEDE----TAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFIS  162 (436)
Q Consensus        91 ~~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~Nill~~  162 (436)
                      ++++.|...    .++++|+|++ |-+|..+|+...  .++...++.|++||+.||.||| ++||||-||||+|||+..
T Consensus       146 ~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  146 QLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             eeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence            999999754    5799999999 669999998764  3999999999999999999999 589999999999999953

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.85  E-value=9.2e-21  Score=168.27  Aligned_cols=201  Identities=20%  Similarity=0.251  Sum_probs=161.7

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-------
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-------  290 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-------  290 (436)
                      .+.+....+..++..+|.+++|+++..||+.|+..........++..-|..+|.|.+|.|+|+||+..+....       
T Consensus        71 ~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~  150 (325)
T KOG4223|consen   71 TPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFP  150 (325)
T ss_pred             CcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccc
Confidence            3556677899999999999999999999999999877666777788888999999999999999999887531       


Q ss_pred             hhc-------cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC
Q 042392          291 KLE-------RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID  363 (436)
Q Consensus       291 ~~~-------~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  363 (436)
                      ..+       ....-++.|++.|.|+||.++++||..++                  .+.....|..-.|.+-+..+|+|
T Consensus       151 d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFL------------------HPEe~p~M~~iVi~Etl~d~Dkn  212 (325)
T KOG4223|consen  151 DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFL------------------HPEEHPHMKDIVIAETLEDIDKN  212 (325)
T ss_pred             cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhcc------------------ChhhcchHHHHHHHHHHhhcccC
Confidence            111       11234788999999999999999997662                  12223445555788999999999


Q ss_pred             CCCcccHHHHHHHHHhhhc-cCCHH----HHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          364 GNGNIDFIEFVNLMTDIYK-LETPE----LLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       364 ~~g~i~f~EF~~~~~~~~~-~~~~~----~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +||+|+++||+.-|..-.. ...++    +-.+.|...|+|+||+++.+|+++|+.+.+.. ...|+++|+.++|.|+|
T Consensus       213 ~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD  291 (325)
T KOG4223|consen  213 GDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKD  291 (325)
T ss_pred             CCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCcc
Confidence            9999999999986554332 22222    24466677899999999999999999988777 89999999999999986

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.85  E-value=2.7e-20  Score=160.62  Aligned_cols=138  Identities=22%  Similarity=0.256  Sum_probs=108.3

Q ss_pred             eeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        28 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      .+...|++|+||+||.+..  .+.+++.+.+..............+.+|+++|+.|.+|++|++++++    ...|++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3567899999999998774  57778877665544322112223578999999999767899999886    34799999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccC-CCCcceeeccCCCCcEEEEecCCccccc
Q 042392          108 LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDL-KPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdl-kp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+.|.+|.+.+..      . ...++.|++.+|.++|++||+|||| ||+|||+   +.++.++|+|||+|....
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecC
Confidence            9999888654321      1 2357889999999999999999999 7999999   667889999999998554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-20  Score=167.23  Aligned_cols=188  Identities=23%  Similarity=0.356  Sum_probs=150.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.-.|++++.||.|+||.++.|++.-++++||||.-+....      ..++.-|....+.|.+.++|+..|-+.....+
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~------APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~   98 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE------APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY   98 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEeccccCC------cchHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence            455589999999999999999999999999999998765543      34688899999999888999999999888888


Q ss_pred             EEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc--CCCCcEEEEecCCcc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR--DDNALLKVTDFGSAL  178 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~--~~~~~~kl~DFG~a~  178 (436)
                      -.+|+|++ |.+|.++..-.++ |+...+..++.|++.-+.|+|++.+|.|||||+|+||+..  .....+.++|||+|+
T Consensus        99 NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen   99 NILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            88999999 7799999988765 9999999999999999999999999999999999999642  233578999999999


Q ss_pred             cccccCCCCCC---ChHHHHHH-----------HHHHHhhhhhhHHHHHHHh
Q 042392          179 LFEEEGGEASD---DTSVILRM-----------KQFRRMSKLKKLTVKVIVE  216 (436)
Q Consensus       179 ~~~~~~~~~~~---~pe~~~~~-----------~~~~~~~d~~s~~~~~~~~  216 (436)
                      .+.+.......   .--.+.|+           +.-+...|+-++|-.++..
T Consensus       178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYF  229 (449)
T KOG1165|consen  178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF  229 (449)
T ss_pred             hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhh
Confidence            88764432211   00011111           2345677888886655543

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=4.1e-20  Score=146.80  Aligned_cols=125  Identities=27%  Similarity=0.416  Sum_probs=109.5

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+.++++.+|..||.+++|+|+.+||+-+++++              |+.     +..+++.+++..+|+++.|.|+|++
T Consensus        30 ~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmral--------------GFE-----~~k~ei~kll~d~dk~~~g~i~fe~   90 (172)
T KOG0028|consen   30 EQKQEIKEAFELFDPDMAGKIDVEELKVAMRAL--------------GFE-----PKKEEILKLLADVDKEGSGKITFED   90 (172)
T ss_pred             HHHhhHHHHHHhhccCCCCcccHHHHHHHHHHc--------------CCC-----cchHHHHHHHHhhhhccCceechHH
Confidence            345789999999999999999999997664443              443     4455899999999999999999999


Q ss_pred             HHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |...|..+.. ..+.++++.||+.||.|++|.|+..+|+.++..||+. +++|+.+||.++|.|+|
T Consensus        91 f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~d  156 (172)
T KOG0028|consen   91 FRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGD  156 (172)
T ss_pred             HHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhccccc
Confidence            9998876644 3466899999999999999999999999999999999 99999999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=3.5e-19  Score=158.96  Aligned_cols=138  Identities=24%  Similarity=0.255  Sum_probs=113.6

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccch----hhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      +.||+|++|.||+|.+  .|..+++|+.........    ......+.+|+.++..+ .|++|+....++......++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEE
Confidence            5799999999999986  678899998654322110    11234577899999999 5999888777777777889999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ||++|++|.+++.....    ....++.+++.+|.++|+.+++|||++|.||++   + .+.++|+|||.+..
T Consensus        79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~---~-~~~~~liDf~~a~~  143 (211)
T PRK14879         79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL---S-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE---E-CCCEEEEECCcccC
Confidence            99999999998865432    778899999999999999999999999999999   4 67899999999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.80  E-value=1.2e-18  Score=153.93  Aligned_cols=135  Identities=21%  Similarity=0.227  Sum_probs=106.5

Q ss_pred             eecccCCeEEEEEEECCCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK----YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      .||+|+||.||+|.+  ++..+++|.........    .......+.+|+.+++.+ .|+++....-++......++|||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEE
Confidence            489999999999984  57889999865432111    112235677899999999 47766555445555666799999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          108 LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |++|++|.+++.....       .++.+++.+|.+||+.|++|||++|.||++   + ++.++++|||++...
T Consensus        78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---R-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---E-CCcEEEEECCCCcCC
Confidence            9999999988754321       789999999999999999999999999999   4 678999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.80  E-value=1.6e-18  Score=164.58  Aligned_cols=178  Identities=36%  Similarity=0.513  Sum_probs=149.2

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC-CeeeceeeeecCCeEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP-NIVELKSAHEDETAVHVV  105 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-niv~~~~~~~~~~~~~iv  105 (436)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+....... ......+.+|+.++..+. |+ +|+++++.+......+++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~-~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~   76 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESK-SKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLV   76 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccc-hhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEE
Confidence            788999999999999999986   789999987765443 224667889999999995 66 899999999888889999


Q ss_pred             EeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC-cEEEEecCCccccc
Q 042392          106 MELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFE  181 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~-~~kl~DFG~a~~~~  181 (436)
                      ++++.++++.+++....   .++...+..++.|++.++.|+|+.+++|||+||+||++   +..+ .++++|||.+....
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~  153 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLP  153 (384)
T ss_pred             EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecC
Confidence            99999999997777664   69999999999999999999999999999999999999   5556 79999999998554


Q ss_pred             ccCCC--------------CCCChHHHHHH--HHHHHhhhhhhHHHH
Q 042392          182 EEGGE--------------ASDDTSVILRM--KQFRRMSKLKKLTVK  212 (436)
Q Consensus       182 ~~~~~--------------~~~~pe~~~~~--~~~~~~~d~~s~~~~  212 (436)
                      .....              ...+||.+.+.  ..+....|+|++|..
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~  200 (384)
T COG0515         154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGIT  200 (384)
T ss_pred             CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHH
Confidence            43211              12289988875  578899999998633

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.80  E-value=6.2e-19  Score=155.54  Aligned_cols=141  Identities=21%  Similarity=0.252  Sum_probs=108.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch------------------hhHHHHHHHHHHHHHhcCCCCC
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY------------------AENDMMIRREIQIRRLLSGQPN   88 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~~h~n   88 (436)
                      |.+.+.||+|+||.||+|.+. +|+.||||++........                  ........+|+.++..+ .|++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEG   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcC
Confidence            888999999999999999874 899999998765321100                  01122367889999988 4764


Q ss_pred             --eeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392           89 --IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        89 --iv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                        +++.++    ....++||||++|++|.....      ......++.+++.++.++|+.||+||||||+||++   +.+
T Consensus        95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~~  161 (198)
T cd05144          95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DDD  161 (198)
T ss_pred             CCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cCC
Confidence              444443    245689999999998866432      14456788999999999999999999999999999   668


Q ss_pred             CcEEEEecCCcccccc
Q 042392          167 ALLKVTDFGSALLFEE  182 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~  182 (436)
                      +.++|+|||.|.....
T Consensus       162 ~~~~liDfg~~~~~~~  177 (198)
T cd05144         162 EKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CcEEEEECCccccCCC
Confidence            8999999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=6.3e-20  Score=185.21  Aligned_cols=253  Identities=22%  Similarity=0.282  Sum_probs=175.7

Q ss_pred             cccce-eeeeeecccCCeEEEEEEECCCCceEEEEEeecC--CccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           23 VMLHY-SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        23 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      +.+.| ....++|.|++|.|+.+........++.|.....  ...........+..|+-+-..+ .|||++..+..+...
T Consensus       315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~  393 (601)
T KOG0590|consen  315 FSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEI  393 (601)
T ss_pred             cccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhc
Confidence            34556 4578899999998888887766666666654421  1111112222256677777778 699999998888777


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ...+-+||||++ +|+.++.+.+.+...++..+++|++.||.|+|..||.|||+||+|+++   ..++.+||+|||.+..
T Consensus       394 ~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~v  469 (601)
T KOG0590|consen  394 DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASV  469 (601)
T ss_pred             ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCccee
Confidence            777777999999 999999988789999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh--hCCCCCCccCHHH
Q 042392          180 FEEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE--MDTDKNGTLSYDE  245 (436)
Q Consensus       180 ~~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~--~D~~~~g~i~~~e  245 (436)
                      +.-...            ....|||++.+..+-....|+||.++.+++..++...+..-..-...  .+....+.-...+
T Consensus       470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~  549 (601)
T KOG0590|consen  470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG  549 (601)
T ss_pred             eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence            654322            22238999998766667899999866655544442222221111111  1122222222222


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          246 LRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       246 L~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ....+..    ++...-..++..++.|+..|++-++.+.
T Consensus       550 ~~~~~~~----lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  550 PNRLLSL----LPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hHHHHHh----chhhHHHHHHHHccCChhheecHHHHhh
Confidence            2333332    3333456677888899999988887664

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.77  E-value=7.6e-18  Score=153.41  Aligned_cols=245  Identities=12%  Similarity=0.088  Sum_probs=178.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..++++..++-+|+||.||.|.+...     .+.|-+|.++....   +-....++.|--.+..+ .|||+..+.++...
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS---~iQv~~~L~es~lly~~-sH~nll~V~~V~ie  358 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS---QIQVNLLLQESMLLYGA-SHPNLLSVLGVSIE  358 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc---HHHHHHHHHHHHHHhcC-cCCCccceeEEEee
Confidence            44678888899999999999977532     34566676654322   23455677888888888 59999999987654


Q ss_pred             -CCeEEEEEeccCCCChHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcE
Q 042392           99 -ETAVHVVMELCQGGDLFDRIIAK--------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALL  169 (436)
Q Consensus        99 -~~~~~iv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~  169 (436)
                       ....++++.+..-|+|..++...        ..++..+...++.|+..|+.|||.+||||.||..+|.++   ++.-++
T Consensus       359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqV  435 (563)
T KOG1024|consen  359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQV  435 (563)
T ss_pred             ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeE
Confidence             45678888998889999999842        126677888999999999999999999999999999999   777899


Q ss_pred             EEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCC
Q 042392          170 KVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       170 kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      ||+|=.+++.+-+....          ...++|.+.. ..|+.++|+|++|+.+ .+.+             .++..+-.
T Consensus       436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVll-WELm-------------tlg~~Pya  500 (563)
T KOG1024|consen  436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLL-WELM-------------TLGKLPYA  500 (563)
T ss_pred             EeccchhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHH-HHHH-------------hcCCCCcc
Confidence            99999999976543221          1228898887 6899999999995544 3322             34455666


Q ss_pred             ccCHHHHHHHHHh---cC--CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          240 TLSYDELRAGLTK---VG--SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       240 ~i~~~eL~~~l~~---~~--~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      .|++.|+..+++.   +.  .+.+++-..-|.=..-..+..+.+|++...++....
T Consensus       501 eIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  501 EIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            7888888777764   22  233333333232234456778888888887765543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.77  E-value=3.9e-18  Score=172.75  Aligned_cols=141  Identities=19%  Similarity=0.157  Sum_probs=111.6

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK----YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..|...+.||+|+||.||+|.+..  ..+++|+........    .......+.+|+.+++.+ .|++++....+.....
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCC
Confidence            345668999999999999998643  345555433221111    112235678999999999 5999988877777777


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..++||||++|++|.+++.        ....++.+++.++.+||+.+++||||||+|||+    .++.++|+|||+|+..
T Consensus       410 ~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~~~  477 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCcccccC
Confidence            7899999999999998875        346789999999999999999999999999999    3468999999999864

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.77  E-value=1.4e-18  Score=134.65  Aligned_cols=125  Identities=18%  Similarity=0.213  Sum_probs=109.1

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC--CCCccc
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID--GNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~  369 (436)
                      +++..+++++|..||..+||+|+..+..++++++                   |++||+.++.+.+.+.+.+  +--.|+
T Consensus         7 ~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRal-------------------G~nPT~aeV~k~l~~~~~~~~~~~rl~   67 (152)
T KOG0030|consen    7 PDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRAL-------------------GQNPTNAEVLKVLGQPKRREMNVKRLD   67 (152)
T ss_pred             cchHHHHHHHHHHHhccCcccccHHHHHHHHHHh-------------------cCCCcHHHHHHHHcCcccchhhhhhhh
Confidence            4556889999999999999999999998876555                   7788889999999999887  567999


Q ss_pred             HHHHHHHHHhhhc---cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhh-ccCC
Q 042392          370 FIEFVNLMTDIYK---LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEV-GRDH  435 (436)
Q Consensus       370 f~EF~~~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~-d~~~  435 (436)
                      |++|+.++..+.+   ..+.+++-+.+++||++|+|.|...||+++|+++|+. +++|++.+++.. |.|+
T Consensus        68 FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~eD~nG  138 (152)
T KOG0030|consen   68 FEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQEDSNG  138 (152)
T ss_pred             HHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccccccCC
Confidence            9999999987665   3456889999999999999999999999999999999 999999999754 4443

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=6.7e-18  Score=134.26  Aligned_cols=143  Identities=24%  Similarity=0.454  Sum_probs=128.1

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~  296 (436)
                      +.+++.+.++..|..+|.+..|.++..||+-+++.+|..+..+++..++..+|.++.|.|+|++|...+... ...++.+
T Consensus        27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~e  106 (172)
T KOG0028|consen   27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKE  106 (172)
T ss_pred             ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHH
Confidence            356777899999999999999999999999999999999999999999999999999999999999886655 3445889


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      +++.+|+.+|-|++|+|+..+|..++..+                   +++++.+++.+|++++|.|++|-|+-+||..+
T Consensus       107 Ei~~afrl~D~D~~Gkis~~~lkrvakeL-------------------genltD~El~eMIeEAd~d~dgevneeEF~~i  167 (172)
T KOG0028|consen  107 EIKKAFRLFDDDKTGKISQRNLKRVAKEL-------------------GENLTDEELMEMIEEADRDGDGEVNEEEFIRI  167 (172)
T ss_pred             HHHHHHHcccccCCCCcCHHHHHHHHHHh-------------------CccccHHHHHHHHHHhcccccccccHHHHHHH
Confidence            99999999999999999999997653333                   67778889999999999999999999999998


Q ss_pred             HHh
Q 042392          377 MTD  379 (436)
Q Consensus       377 ~~~  379 (436)
                      |.+
T Consensus       168 mk~  170 (172)
T KOG0028|consen  168 MKK  170 (172)
T ss_pred             Hhc
Confidence            864

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=2.6e-18  Score=177.19  Aligned_cols=185  Identities=22%  Similarity=0.252  Sum_probs=143.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeec
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHED   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~   98 (436)
                      +.-.+.|.|.+.||+|+||.||+|.+.. |+.||+|+-+......       +.--.+++.+|.  --|-|..+..++..
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-------fYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-------FYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-------eeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            4455679999999999999999999876 9999999876554332       122223333331  12567777777777


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc----CCCCcEEEEec
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR----DDNALLKVTDF  174 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~----~~~~~~kl~DF  174 (436)
                      .+.-++|+||.+.|+|.+++...+.+++..+..+..|++..|..||.++|||+||||.|+||...    .....++|+||
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence            88889999999999999999987889999999999999999999999999999999999999642    23456999999


Q ss_pred             CCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          175 GSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       175 G~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |.|..+.--...          ...-+|+..| +.|++..|...++.++-
T Consensus       846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h  894 (974)
T KOG1166|consen  846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVH  894 (974)
T ss_pred             ccceeeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHH
Confidence            999876542222          1126777776 68899999988755543

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-17  Score=139.65  Aligned_cols=159  Identities=23%  Similarity=0.287  Sum_probs=138.0

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHH
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSK  300 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~  300 (436)
                      ....+...|...|.+..|.|+.+||+.+|... ..+++.+.++.|+.++|.+.+|.|++.||...+...+      .++.
T Consensus        55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~  128 (221)
T KOG0037|consen   55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRN  128 (221)
T ss_pred             ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHH
Confidence            45567889999999999999999999999854 4689999999999999999999999999998876554      4999


Q ss_pred             HHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh
Q 042392          301 AFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       301 ~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                      +|+.||+|++|.|+..||..++..+                   |..++++-.+-+++++|.-++|.|.|++|+.++...
T Consensus       129 vF~~~D~D~SG~I~~sEL~~Al~~~-------------------Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L  189 (221)
T KOG0037|consen  129 VFRTYDRDRSGTIDSSELRQALTQL-------------------GYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL  189 (221)
T ss_pred             HHHhcccCCCCcccHHHHHHHHHHc-------------------CcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence            9999999999999999998774443                   666677788999999998889999999999998765


Q ss_pred             hccCCHHHHHHHHHhhccCCCCccc--HHHHHH
Q 042392          381 YKLETPELLEKAFQYLDKNSDQFIT--VNELET  411 (436)
Q Consensus       381 ~~~~~~~~~~~~F~~~D~d~~G~I~--~~el~~  411 (436)
                      .      .+.++|+.+|.+.+|.|+  .++|..
T Consensus       190 ~------~lt~~Fr~~D~~q~G~i~~~y~dfl~  216 (221)
T KOG0037|consen  190 Q------RLTEAFRRRDTAQQGSITISYDDFLQ  216 (221)
T ss_pred             H------HHHHHHHHhccccceeEEEeHHHHHH
Confidence            4      588999999999999865  566554

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.75  E-value=5.4e-18  Score=148.22  Aligned_cols=141  Identities=17%  Similarity=0.206  Sum_probs=99.6

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHH---------------------HHHHHHHHHHhcCCC-C
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM---------------------MIRREIQIRRLLSGQ-P   87 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-~   87 (436)
                      .+.||+|+||.||+|.+. +++.||||++....... .....                     ....|...+..+.++ .
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSF-KKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccch-hhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            567999999999999976 89999999987543221 01111                     113566666665311 2


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCC
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDR-IIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDD  165 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~  165 (436)
                      .+++.+++    ...++||||++++.+... +.... .. ..+..++.+++.++.++|. .+|+||||||+||++   + 
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili---~-  149 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV---D-  149 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE---E-
Confidence            24444443    235899999998544221 11111 11 6788999999999999999 999999999999999   4 


Q ss_pred             CCcEEEEecCCcccccc
Q 042392          166 NALLKVTDFGSALLFEE  182 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~  182 (436)
                      ++.++|+|||.|.....
T Consensus       150 ~~~~~liDfg~a~~~~~  166 (187)
T cd05119         150 DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             CCcEEEEECcccccccC
Confidence            78899999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.74  E-value=2e-17  Score=130.45  Aligned_cols=120  Identities=17%  Similarity=0.308  Sum_probs=106.1

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..++++++++|..+|.|+||.|+.++|+..+.++                   |+..++++++.|+++.    .|.|+|.
T Consensus        28 q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSl-------------------Gk~~~d~elDaM~~Ea----~gPINft   84 (171)
T KOG0031|consen   28 QSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASL-------------------GKIASDEELDAMMKEA----PGPINFT   84 (171)
T ss_pred             HHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHc-------------------CCCCCHHHHHHHHHhC----CCCeeHH
Confidence            4567899999999999999999999997764444                   6667888999999887    8999999


Q ss_pred             HHHHHHHhhhccCCH-HHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccC
Q 042392          372 EFVNLMTDIYKLETP-ELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRD  434 (436)
Q Consensus       372 EF~~~~~~~~~~~~~-~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~  434 (436)
                      -|+.++.......++ +.+..||+.||.+++|+|..+.|+++|++.|.+ +++||+.|++.+..|
T Consensus        85 ~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d  149 (171)
T KOG0031|consen   85 VFLTMFGEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPID  149 (171)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcc
Confidence            999999887776666 459999999999999999999999999999999 999999999988663

>PTZ00183 centrin; Provisional

Probab=99.74  E-value=4.5e-17  Score=138.27  Aligned_cols=144  Identities=26%  Similarity=0.458  Sum_probs=113.4

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~  295 (436)
                      .++++++..+..+|..+|.+.+|.++..++..+++.++..++...+..+++.+|.+++|.|+|.||+..+... ......
T Consensus        10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   89 (158)
T PTZ00183         10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPR   89 (158)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcH
Confidence            3578888999999999999999999999999999999988889999999999999999999999999876543 223344


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..++.+|+.+|++++|.|+..||..++..+                   +..++..++..++..+|.|++|.|+|+||..
T Consensus        90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-------------------~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~  150 (158)
T PTZ00183         90 EEILKAFRLFDDDKTGKISLKNLKRVAKEL-------------------GETITDEELQEMIDEADRNGDGEISEEEFYR  150 (158)
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            567888888888888888877775442211                   2223445677777777777777788888777


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      ++..
T Consensus       151 ~~~~  154 (158)
T PTZ00183        151 IMKK  154 (158)
T ss_pred             HHhc
Confidence            6643

>PTZ00184 calmodulin; Provisional

Probab=99.73  E-value=4.1e-17  Score=137.04  Aligned_cols=145  Identities=28%  Similarity=0.536  Sum_probs=121.8

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      +.+++++++..+...|..+|.+.+|.|+.+++..++..++..++.+++..+++.+|.+++|.|+|.||+..+.... ...
T Consensus         2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            3456788899999999999999999999999999999999888899999999999999999999999998876542 233


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|+.+|.+++|+|+..+|..++..+              |     ...+.+++..+++.+|.+++|.|+|+||
T Consensus        82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~--------------~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef  142 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNL--------------G-----EKLTDEEVDEMIREADVDGDGQINYEEF  142 (149)
T ss_pred             HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH--------------C-----CCCCHHHHHHHHHhcCCCCCCcCcHHHH
Confidence            45678999999999999999999996553221              2     2234557889999999999999999999


Q ss_pred             HHHHH
Q 042392          374 VNLMT  378 (436)
Q Consensus       374 ~~~~~  378 (436)
                      +.++.
T Consensus       143 ~~~~~  147 (149)
T PTZ00184        143 VKMMM  147 (149)
T ss_pred             HHHHh
Confidence            98764

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.72  E-value=1e-16  Score=126.50  Aligned_cols=141  Identities=23%  Similarity=0.381  Sum_probs=125.8

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~  294 (436)
                      .++...++++++++|..+|.+.+|.|..++|...+.++|..+++++++.|+++.    +|.|+|.-|+..+-... ..++
T Consensus        24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdp   99 (171)
T KOG0031|consen   24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDP   99 (171)
T ss_pred             HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCH
Confidence            357889999999999999999999999999999999999999999999999985    88999999999887664 3456


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .+-+..+|+.||.+++|.|..+.|++.|.+                   .+.++++++|+++++.+-.|..|.++|.+|+
T Consensus       100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt-------------------~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~  160 (171)
T KOG0031|consen  100 EEVILNAFKTFDDEGSGKIDEDYLRELLTT-------------------MGDRFTDEEVDEMYREAPIDKKGNFDYKAFT  160 (171)
T ss_pred             HHHHHHHHHhcCccCCCccCHHHHHHHHHH-------------------hcccCCHHHHHHHHHhCCcccCCceeHHHHH
Confidence            778999999999999999988888665333                   3788899999999999999999999999999


Q ss_pred             HHHHh
Q 042392          375 NLMTD  379 (436)
Q Consensus       375 ~~~~~  379 (436)
                      .++..
T Consensus       161 ~~ith  165 (171)
T KOG0031|consen  161 YIITH  165 (171)
T ss_pred             HHHHc
Confidence            98874

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.70  E-value=1.5e-17  Score=176.65  Aligned_cols=130  Identities=20%  Similarity=0.195  Sum_probs=97.7

Q ss_pred             C-CCeeeceeee-------ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCC
Q 042392           86 Q-PNIVELKSAH-------EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE  156 (436)
Q Consensus        86 h-~niv~~~~~~-------~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~  156 (436)
                      | +||.+++++|       .....++.++|++. ++|.+++... ..+++.+++.+++||+.||.|||++||+||||||+
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~  109 (793)
T PLN00181         31 HIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPS  109 (793)
T ss_pred             HHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCch
Confidence            5 6788888877       23346788899885 5999999753 45899999999999999999999999999999999


Q ss_pred             cceeec----------------cCCCCcEEEEecCCccccccc------------------------CCCCCCChHHHHH
Q 042392          157 NFCFIS----------------RDDNALLKVTDFGSALLFEEE------------------------GGEASDDTSVILR  196 (436)
Q Consensus       157 Nill~~----------------~~~~~~~kl~DFG~a~~~~~~------------------------~~~~~~~pe~~~~  196 (436)
                      |||+..                .+.++.+|++|||+++.....                        +.....+||++.+
T Consensus       110 NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        110 CFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             hEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence            999942                123456788888887643210                        0011338998876


Q ss_pred             HHHHHHhhhhhhHHHHHHHhcC
Q 042392          197 MKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       197 ~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                       ..|+.++|+||+ +|++.+.+
T Consensus       190 -~~~~~~sDVwSl-GviL~ELl  209 (793)
T PLN00181        190 -SSSNCASDVYRL-GVLLFELF  209 (793)
T ss_pred             -CCCCchhhhhhH-HHHHHHHh
Confidence             467899999999 55555555

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.70  E-value=2.8e-16  Score=141.97  Aligned_cols=140  Identities=19%  Similarity=0.232  Sum_probs=104.1

Q ss_pred             eeeec-ccCCeEEEEEEECCCCceEEEEEeecCCc-----cc----hhhHHHHHHHHHHHHHhcCCCCCe--eeceeeee
Q 042392           30 GRMLG-RGRFGVTYLCTENSTNMPYACKSMAKKPK-----MK----YAENDMMIRREIQIRRLLSGQPNI--VELKSAHE   97 (436)
Q Consensus        30 ~~~lg-~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~----~~~~~~~~~~E~~~l~~l~~h~ni--v~~~~~~~   97 (436)
                      ...|| .|+.|+||.+...  +..++||.+.....     ..    .......+.+|+.++..| .|++|  ++.+++..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~  112 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARV  112 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeee
Confidence            34677 7888888888753  77899998754321     00    012335678899999999 57774  66776643


Q ss_pred             cC-C---eEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           98 DE-T---AVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        98 ~~-~---~~~iv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      .. .   ..++|||+++| .+|.+++.. .++++.    .+.||+.++.+||+.||+||||||+|||+   +.++.++|+
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LI  184 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQE-APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLI  184 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEE
Confidence            32 2   23599999997 688888754 345544    36789999999999999999999999999   556789999


Q ss_pred             ecCCcccc
Q 042392          173 DFGSALLF  180 (436)
Q Consensus       173 DFG~a~~~  180 (436)
                      |||.+...
T Consensus       185 Dfg~~~~~  192 (239)
T PRK01723        185 DFDRGELR  192 (239)
T ss_pred             ECCCcccC
Confidence            99998764

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.68  E-value=4.5e-17  Score=165.53  Aligned_cols=245  Identities=16%  Similarity=0.206  Sum_probs=178.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ..|...+.||++.|=+|.+|++. .|. |+||++.++...-.-..-.+.+.|++ .... +|||++.+--+.......|+
T Consensus        23 ~e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   23 VECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             cceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHH
Confidence            37888999999999999999975 354 99999877653221222333445555 3334 79999999999888888999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccC
Q 042392          105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG  184 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  184 (436)
                      |-+|... +|++++..++-+..-+.+.|+.|++.||.-+|..||+|+|||.+|||+   ++-+.+.|+||..-+..--+.
T Consensus        99 vRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi---TSWNW~~LtDFAsFKPtYLPe  174 (1431)
T KOG1240|consen   99 VRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI---TSWNWLYLTDFASFKPTYLPE  174 (1431)
T ss_pred             HHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE---eeechhhhhcccccCCccCCC
Confidence            9999977 999999988878899999999999999999999999999999999999   677789999997665431111


Q ss_pred             CCC-------------C--CChHHHHHHH----------HHHHhhhhhhHHHHHHHhcCCh-hhHHHHHHHhhhhCCCCC
Q 042392          185 GEA-------------S--DDTSVILRMK----------QFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKN  238 (436)
Q Consensus       185 ~~~-------------~--~~pe~~~~~~----------~~~~~~d~~s~~~~~~~~~l~~-e~~~~l~~~F~~~D~~~~  238 (436)
                      ...             +  .|||-+....          ..+++-||.|+ +|++++.+.+ ...-.+.++|..    ..
T Consensus       175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~-GCViaELf~Eg~PlF~LSQL~aY----r~  249 (1431)
T KOG1240|consen  175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSA-GCVIAELFLEGRPLFTLSQLLAY----RS  249 (1431)
T ss_pred             CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhh-hHHHHHHHhcCCCcccHHHHHhH----hc
Confidence            111             1  1999877522          14567799999 8888888744 444455555543    11


Q ss_pred             C-ccCHHHHHHHHHhcCCCCCHHHHHH-HHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          239 G-TLSYDELRAGLTKVGSMLTEFDVKQ-LMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       239 g-~i~~~eL~~~l~~~~~~~s~~~i~~-l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      | ....+.+   ++++...    .++. +..+++.|++.|++-++|+......
T Consensus       250 ~~~~~~e~~---Le~Ied~----~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  250 GNADDPEQL---LEKIEDV----SLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             cCccCHHHH---HHhCcCc----cHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            2 3444443   3343322    2444 4567899999999999999876544

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.67  E-value=6.3e-16  Score=119.97  Aligned_cols=140  Identities=19%  Similarity=0.279  Sum_probs=123.5

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC--CCCcccHHHHHHHHHhh---hhh
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD--GNGAIDYTEFTAATIQR---QKL  292 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d--~~g~i~~~EF~~~~~~~---~~~  292 (436)
                      +++++...++.+|..+|...+|.|+..+....++.+|.+|++.++.+...+++.+  +-.+|+|++|+..+...   ...
T Consensus         5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q   84 (152)
T KOG0030|consen    5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ   84 (152)
T ss_pred             cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence            4677788999999999999999999999999999999999999999999999877  66899999999987644   344


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+.+.+.+..+.||++++|.|...||++.+.++                   |+++++++++.++.-. .|.+|.|+|+.
T Consensus        85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttl-------------------Gekl~eeEVe~Llag~-eD~nG~i~YE~  144 (152)
T KOG0030|consen   85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTL-------------------GEKLTEEEVEELLAGQ-EDSNGCINYEA  144 (152)
T ss_pred             CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHH-------------------HhhccHHHHHHHHccc-cccCCcCcHHH
Confidence            567889999999999999999999998876555                   8899999999998754 57799999999


Q ss_pred             HHHHH
Q 042392          373 FVNLM  377 (436)
Q Consensus       373 F~~~~  377 (436)
                      |+..+
T Consensus       145 fVk~i  149 (152)
T KOG0030|consen  145 FVKHI  149 (152)
T ss_pred             HHHHH
Confidence            99854

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.67  E-value=4.8e-16  Score=130.60  Aligned_cols=133  Identities=23%  Similarity=0.296  Sum_probs=110.1

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-CCeeeceeeeecCCeEEEEEe
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-PNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~~~~~iv~e  107 (436)
                      +.+.||+|.++.||++....  ..+++|.......      ...+.+|+.+++.+.++ +++++++.++...+..|++||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e   73 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME   73 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence            45789999999999999743  6799998755432      34678999999999533 699999999888888999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          108 LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM---GVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      |++|+.+..+       +......++.+++.++.++|..   +++|+|++|+||++   +..+.++++|||.+..
T Consensus        74 ~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~---~~~~~~~l~Df~~~~~  138 (155)
T cd05120          74 WIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYAGY  138 (155)
T ss_pred             ecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE---ECCcEEEEEecccccC
Confidence            9998777543       4556677889999999999984   69999999999999   4568899999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PTZ00183 centrin; Provisional

Probab=99.65  E-value=1.2e-15  Score=129.39  Aligned_cols=83  Identities=31%  Similarity=0.522  Sum_probs=38.6

Q ss_pred             HHHHHHHccccCCCCcccHHHHHHHHHhhh-ccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHH
Q 042392          352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIY-KLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIIS  429 (436)
Q Consensus       352 ~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~  429 (436)
                      .+..+++.+|.+++|.|+|+||+.++.... .....+.++.+|+.+|+|++|+|+.+||..++..+|.. ++++++.+++
T Consensus        54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~  133 (158)
T PTZ00183         54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMID  133 (158)
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            344455555555555555555544433221 11222344455555555555555555555555444444 4444555555


Q ss_pred             hhccC
Q 042392          430 EVGRD  434 (436)
Q Consensus       430 ~~d~~  434 (436)
                      .+|.|
T Consensus       134 ~~d~~  138 (158)
T PTZ00183        134 EADRN  138 (158)
T ss_pred             HhCCC
Confidence            54443

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.65  E-value=2.1e-15  Score=128.09  Aligned_cols=153  Identities=20%  Similarity=0.246  Sum_probs=121.7

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHH-HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD-VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~-i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      .++..++..+++-|..  ..|+|.++.++++.++..+.+.-+.+. ++.+|+.+|.|++|.|+|.||+.++.........
T Consensus        22 ~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~e   99 (193)
T KOG0044|consen   22 KFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLE   99 (193)
T ss_pred             CCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHH
Confidence            4577777777777765  568999999999999999886555444 6789999999999999999999999888888888


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+++|.||+|+|+..|+.+...++..+...       ...+ ......++.+..+|+++|.|+||.|+++||..
T Consensus       100 ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~-------~~~~-~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~  171 (193)
T KOG0044|consen  100 EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGS-------KALP-EDEETPEERVDKIFSKMDKNKDGKLTLEEFIE  171 (193)
T ss_pred             HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHccc-------ccCC-cccccHHHHHHHHHHHcCCCCCCcccHHHHHH
Confidence            899999999999999999999998775555333221       1111 22344566788888899999999999999988


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      .+..
T Consensus       172 ~~~~  175 (193)
T KOG0044|consen  172 GCKA  175 (193)
T ss_pred             Hhhh
Confidence            7653

>PTZ00184 calmodulin; Provisional

Probab=99.63  E-value=2.7e-15  Score=125.94  Aligned_cols=124  Identities=28%  Similarity=0.463  Sum_probs=89.5

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++..|..+|.+++|.|+.+||..++..+              +.     .++...+..+++.+|.+++|.|+|+||
T Consensus         9 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~--------------~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef   69 (149)
T PTZ00184          9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSL--------------GQ-----NPTEAELQDMINEVDADGNGTIDFPEF   69 (149)
T ss_pred             HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh--------------CC-----CCCHHHHHHHHHhcCcCCCCcCcHHHH
Confidence            44567788888888888888888886542111              22     223446788888888888888888888


Q ss_pred             HHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++..... ....+.++.+|+.||+|++|+|+.+||+.++...|.. ++++++.+++.+|.|++
T Consensus        70 ~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~  134 (149)
T PTZ00184         70 LTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD  134 (149)
T ss_pred             HHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCC
Confidence            887665432 2234567888888888888888888888888877766 77888888888877654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.62  E-value=2.9e-15  Score=136.37  Aligned_cols=185  Identities=20%  Similarity=0.251  Sum_probs=115.9

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC---------CCCeeeceee
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG---------QPNIVELKSA   95 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---------h~niv~~~~~   95 (436)
                      ..+...+.||.|+++.||.+++..||+++|+|+........ ....+.+++|.-....+.+         |-.++-.++.
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~-~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~   90 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADAS-ANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL   90 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTH-TTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccc-hHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence            35677899999999999999999999999999987665322 3445566666543333211         1122222222


Q ss_pred             ee---------cC---C-----eEEEEEeccCCCChHHHHHH---cCCC--CH-HHH-HHHHHHHHHHHHHHHHcCcccc
Q 042392           96 HE---------DE---T-----AVHVVMELCQGGDLFDRIIA---KGYY--SE-RDA-APVLRAIVNAVNVCHSMGVMHR  151 (436)
Q Consensus        96 ~~---------~~---~-----~~~iv~e~~~~g~L~~~l~~---~~~~--~~-~~~-~~~~~qi~~~l~~lH~~~i~Hr  151 (436)
                      ..         ..   .     +.+++|+-+.+ +|.+++..   ....  .. ..+ ..+..|++..+++||..|++|+
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHg  169 (288)
T PF14531_consen   91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHG  169 (288)
T ss_dssp             EEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             EEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence            11         11   1     24678888865 88877653   2222  11 222 3456899999999999999999


Q ss_pred             cCCCCcceeeccCCCCcEEEEecCCcccccccC----CCCCCChHHHHHHH--------HHHHhhhhhhHHHHHH
Q 042392          152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG----GEASDDTSVILRMK--------QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       152 dlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~pe~~~~~~--------~~~~~~d~~s~~~~~~  214 (436)
                      ||+|+|+++   +.+|.+.|+||+.........    .....+|+.+....        .|+.+.|.|++|+.++
T Consensus       170 di~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly  241 (288)
T PF14531_consen  170 DIKPENFLL---DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY  241 (288)
T ss_dssp             T-SGGGEEE----TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred             ccceeeEEE---cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence            999999999   788999999998876654322    12223455454433        4788999999977764

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.61  E-value=4.6e-17  Score=157.45  Aligned_cols=175  Identities=23%  Similarity=0.336  Sum_probs=144.8

Q ss_pred             eecccCCeEEEEEEE---CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           32 MLGRGRFGVTYLCTE---NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        32 ~lg~G~~g~V~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      ++|.|+||.|++++-   ...|..||+|++.+.........  ....|..++..+.+||.++++...++.+..+|+++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~   78 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF   78 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence            479999999998653   24578899999877654331111  4456777777775799999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC--
Q 042392          109 CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE--  186 (436)
Q Consensus       109 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~--  186 (436)
                      ..||+|+..+.....+.+.....+...++-++.++|+.+|+|||+|++||++   +..|++++.|||+++........  
T Consensus        79 ~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~cg  155 (612)
T KOG0603|consen   79 LRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIACG  155 (612)
T ss_pred             cccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhccc
Confidence            9999999999888888999999999999999999999999999999999999   89999999999999987654433  


Q ss_pred             --CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          187 --ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       187 --~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        ...+||+..   ....++|.|++|+..+
T Consensus       156 t~eymApEI~~---gh~~a~D~ws~gvl~f  182 (612)
T KOG0603|consen  156 TYEYRAPEIIN---GHLSAADWWSFGVLAF  182 (612)
T ss_pred             chhhhhhHhhh---ccCCcccchhhhhhHH
Confidence              233899887   3567899999865543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=9.8e-16  Score=140.20  Aligned_cols=123  Identities=25%  Similarity=0.341  Sum_probs=94.0

Q ss_pred             CCCCeeeceeeeec---------------------------CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHH
Q 042392           85 GQPNIVELKSAHED---------------------------ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV  137 (436)
Q Consensus        85 ~h~niv~~~~~~~~---------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~  137 (436)
                      .|||||++..+|.+                           +..+|+||.-.+. +|.+++-.+. .+....+-++.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHHH
Confidence            69999999988743                           2358999998876 9999997654 66778888999999


Q ss_pred             HHHHHHHHcCcccccCCCCcceeec-cCCCCcEEEEecCCcccccccCC--------------CCCCChHHHHHHH----
Q 042392          138 NAVNVCHSMGVMHRDLKPENFCFIS-RDDNALLKVTDFGSALLFEEEGG--------------EASDDTSVILRMK----  198 (436)
Q Consensus       138 ~~l~~lH~~~i~Hrdlkp~Nill~~-~~~~~~~kl~DFG~a~~~~~~~~--------------~~~~~pe~~~~~~----  198 (436)
                      +|+.|||++||.|||||..|||+.- .+....+.|+|||++---...+-              ....|||+.....    
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a  431 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA  431 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence            9999999999999999999999963 33445789999998754332111              1112888877543    


Q ss_pred             --HHHHhhhhhhHH
Q 042392          199 --QFRRMSKLKKLT  210 (436)
Q Consensus       199 --~~~~~~d~~s~~  210 (436)
                        .| .+.|.|..|
T Consensus       432 vvny-~kAD~WA~G  444 (598)
T KOG4158|consen  432 VVNY-EKADTWAAG  444 (598)
T ss_pred             eecc-chhhhhhhh
Confidence              23 468999973

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.60  E-value=1.6e-14  Score=122.82  Aligned_cols=149  Identities=22%  Similarity=0.339  Sum_probs=114.7

Q ss_pred             hcCChhhHHHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCc-ccHHHHHHHHHhhhhhc
Q 042392          216 EYLPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA-IDYTEFTAATIQRQKLE  293 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~-i~~~EF~~~~~~~~~~~  293 (436)
                      ..++.+++..+...|..++.+ ..|.++.+|+..+....-.++    .++++..++.+++|. |+|.+|+..+.......
T Consensus        25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~----~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~  100 (187)
T KOG0034|consen   25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPL----ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA  100 (187)
T ss_pred             cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcH----HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence            446788999999999999999 999999999999874333232    678889999988888 99999999987765544


Q ss_pred             cH-HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          294 RS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       294 ~~-~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .. ++++-+|++||.+++|+|+.+|+...+..+      +     ..+... ....-++.++.++.++|.|+||.|+|+|
T Consensus       101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~------~-----~~~~~~-~~e~~~~i~d~t~~e~D~d~DG~IsfeE  168 (187)
T KOG0034|consen  101 SKREKLRFAFRVYDLDGDGFISREELKQILRMM------V-----GENDDM-SDEQLEDIVDKTFEEADTDGDGKISFEE  168 (187)
T ss_pred             cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH------H-----ccCCcc-hHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            44 599999999999999999999997653333      1     001111 1233445677788888888888888888


Q ss_pred             HHHHHHhh
Q 042392          373 FVNLMTDI  380 (436)
Q Consensus       373 F~~~~~~~  380 (436)
                      |..++...
T Consensus       169 f~~~v~~~  176 (187)
T KOG0034|consen  169 FCKVVEKQ  176 (187)
T ss_pred             HHHHHHcC
Confidence            88877643

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.59  E-value=3.2e-14  Score=120.88  Aligned_cols=154  Identities=23%  Similarity=0.318  Sum_probs=119.4

Q ss_pred             ccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCC-CCcccHHHHHHHHHhhhh-hccHHHHHHHHHHhCCCCCCchhhhh
Q 042392          240 TLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG-NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRA  317 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~-~g~i~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~~~~G~i~~~e  317 (436)
                      .+..+.+.....  ...++..++..+++.+-.++ +|.++-.+|...+....+ .+.......+|+.||+|+||.|++.|
T Consensus         8 ~~~~~~~e~l~~--~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~E   85 (193)
T KOG0044|consen    8 KLQPESLEQLVQ--QTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLE   85 (193)
T ss_pred             cCCcHHHHHHHH--hcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHH
Confidence            344444444332  23688999999999997774 999999999998877654 56667789999999999999999999


Q ss_pred             hhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhcc----------C-CH
Q 042392          318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL----------E-TP  386 (436)
Q Consensus       318 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~----------~-~~  386 (436)
                      |..++-.+                   .....++.+...|+.+|.|++|.|+++|++.++..+...          . ..
T Consensus        86 fi~als~~-------------------~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~  146 (193)
T KOG0044|consen   86 FICALSLT-------------------SRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPE  146 (193)
T ss_pred             HHHHHHHH-------------------cCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHH
Confidence            86552222                   222344567889999999999999999999988655431          1 12


Q ss_pred             HHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          387 ELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       387 ~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      +...++|+.+|+|+||.||.+|+.+...
T Consensus       147 ~~v~~if~k~D~n~Dg~lT~eef~~~~~  174 (193)
T KOG0044|consen  147 ERVDKIFSKMDKNKDGKLTLEEFIEGCK  174 (193)
T ss_pred             HHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence            4588999999999999999999999875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.58  E-value=2e-15  Score=149.69  Aligned_cols=154  Identities=17%  Similarity=0.214  Sum_probs=100.7

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc------------------------------hh
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK------------------------------YA   67 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~   67 (436)
                      .+.+.+...|.. +.||+|++|.||+|+.+.+|+.||||+++......                              ..
T Consensus       113 ~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~  191 (537)
T PRK04750        113 GPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVA  191 (537)
T ss_pred             CCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHH
Confidence            445556666776 89999999999999998789999999997542110                              00


Q ss_pred             hHHHHHHHHHHHH------HhcC---CCCCeeeceeeeec-CCeEEEEEeccCCCChHHH--HHHcC----CCCHHHHHH
Q 042392           68 ENDMMIRREIQIR------RLLS---GQPNIVELKSAHED-ETAVHVVMELCQGGDLFDR--IIAKG----YYSERDAAP  131 (436)
Q Consensus        68 ~~~~~~~~E~~~l------~~l~---~h~niv~~~~~~~~-~~~~~iv~e~~~~g~L~~~--l~~~~----~~~~~~~~~  131 (436)
                      +....+.+|+...      ..+.   .+.+.+.+-.+|.+ ....++||||++|+++.++  +...+    .+.+..+..
T Consensus       192 e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~  271 (537)
T PRK04750        192 EFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV  271 (537)
T ss_pred             HHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence            1122333444333      3332   12333333333321 3446799999999999764  33333    244444555


Q ss_pred             HHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC----cEEEEecCCcccccc
Q 042392          132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA----LLKVTDFGSALLFEE  182 (436)
Q Consensus       132 ~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~----~~kl~DFG~a~~~~~  182 (436)
                      ++.|++       ..|++|+|++|.||++   +.++    .++++|||++..+..
T Consensus       272 ~~~Qif-------~~GffHaDpHPGNIlv---~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        272 FFTQVF-------RDGFFHADMHPGNIFV---SYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHHHH-------hCCeeeCCCChHHeEE---ecCCCCCCeEEEEecceEEECCH
Confidence            555554       5899999999999999   4455    899999999987743

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.56  E-value=2.9e-14  Score=139.95  Aligned_cols=144  Identities=17%  Similarity=0.171  Sum_probs=96.7

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh------------------------------hH------HHHH
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA------------------------------EN------DMMI   73 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------~~------~~~~   73 (436)
                      .+.||+|++|.||+|+. .+|+.||||+.+......-.                              ..      +-.+
T Consensus       122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            46799999999999996 47999999998654211000                              00      0123


Q ss_pred             HHHHHHHHhcC----CCCCeeeceeee-ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHH-HHHHHHHc
Q 042392           74 RREIQIRRLLS----GQPNIVELKSAH-EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVN-AVNVCHSM  146 (436)
Q Consensus        74 ~~E~~~l~~l~----~h~niv~~~~~~-~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~-~l~~lH~~  146 (436)
                      .+|...+..+.    ++|+| .+-.++ ......++||||++|++|.++.... ...+   ...++.+++. .+..+|..
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       201 RREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence            44555554442    34443 222222 2234568999999999998876532 1122   2345555554 46788999


Q ss_pred             CcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       147 ~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |++|+|++|.||++   ..++.++++|||++..+.
T Consensus       277 g~~H~D~hPgNilv---~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFV---LKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence            99999999999999   677899999999998763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.51  E-value=2.3e-13  Score=117.62  Aligned_cols=144  Identities=10%  Similarity=0.103  Sum_probs=103.6

Q ss_pred             eeeecccCCeEEEEEEECC------CCceEEEEEeecCCcc---ch---------------hhHHHH----HHHHHHHHH
Q 042392           30 GRMLGRGRFGVTYLCTENS------TNMPYACKSMAKKPKM---KY---------------AENDMM----IRREIQIRR   81 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~------~~~~~aiK~~~~~~~~---~~---------------~~~~~~----~~~E~~~l~   81 (436)
                      ..+||.|.-+.||.|....      .+..+|||+.+.....   ..               ......    ..+|...|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            4579999999999998643      3579999987643210   00               011222    348999999


Q ss_pred             hcCCC-CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCcccccCCCCcce
Q 042392           82 LLSGQ-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC-HSMGVMHRDLKPENFC  159 (436)
Q Consensus        82 ~l~~h-~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l-H~~~i~Hrdlkp~Nil  159 (436)
                      .+... -++++.+.+    ..-++||||+.+..+..-..+...++...+..++.+++.++..+ |..||+|+||+|.||+
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            88532 567777765    45689999997654432222223456667778889999999999 8999999999999999


Q ss_pred             eeccCCCCcEEEEecCCccccc
Q 042392          160 FISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       160 l~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +   . ++.+.|+|||.|....
T Consensus       158 ~---~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         158 W---H-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             E---E-CCcEEEEECCCceeCC
Confidence            9   3 4679999999998664

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.51  E-value=2.7e-13  Score=124.17  Aligned_cols=166  Identities=22%  Similarity=0.292  Sum_probs=134.3

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEY  297 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~  297 (436)
                      .++...+++.+|..+|.+.+|.++..+|.+.+..+..+ +..+-...+|+..|.|.+|+++|.||..++....     .+
T Consensus         9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E-----~~   83 (463)
T KOG0036|consen    9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE-----LE   83 (463)
T ss_pred             cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH-----HH
Confidence            45666788999999999999999999999999998765 7888899999999999999999999999886553     46


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      +.+.|+..|.|.||.|+..|+...+.              ++|     -+.+.+++.++++.+|+++++.|+++||...+
T Consensus        84 l~~~F~~iD~~hdG~i~~~Ei~~~l~--------------~~g-----i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~  144 (463)
T KOG0036|consen   84 LYRIFQSIDLEHDGKIDPNEIWRYLK--------------DLG-----IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHL  144 (463)
T ss_pred             HHHHHhhhccccCCccCHHHHHHHHH--------------HhC-----CccCHHHHHHHHHHhccCCCeeeccHHHHhhh
Confidence            99999999999999999999976532              233     33456689999999999999999999999877


Q ss_pred             HhhhccCCHHHHHHHH------HhhccCCCCcccHHHHHHH
Q 042392          378 TDIYKLETPELLEKAF------QYLDKNSDQFITVNELETA  412 (436)
Q Consensus       378 ~~~~~~~~~~~~~~~F------~~~D~d~~G~I~~~el~~~  412 (436)
                      ....    .+.+..++      ..+|...+..|..+...+.
T Consensus       145 ll~p----~s~i~di~~~W~h~~~idigE~~~iPdg~s~~e  181 (463)
T KOG0036|consen  145 LLYP----ESDLEDIYDFWRHVLLIDIGEDAVLPDGDSKLE  181 (463)
T ss_pred             hcCC----hhHHHHHHHhhhhheEEEccccccCCcchHHHH
Confidence            5432    33444443      3468888888884444443

>PLN02964 phosphatidylserine decarboxylase

Probab=99.48  E-value=2e-13  Score=136.41  Aligned_cols=116  Identities=18%  Similarity=0.251  Sum_probs=91.8

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHH---HHHHHHccccCCCCcccH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM---LKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~g~i~f  370 (436)
                      +.++++++|..+|+|++|++    +..+              ++.+|.    ..+++++   +.++|+.+|.|++|.|+|
T Consensus       141 qi~elkeaF~lfD~dgdG~i----Lg~i--------------lrslG~----~~pte~e~~fi~~mf~~~D~DgdG~Idf  198 (644)
T PLN02964        141 EPESACESFDLLDPSSSNKV----VGSI--------------FVSCSI----EDPVETERSFARRILAIVDYDEDGQLSF  198 (644)
T ss_pred             HHHHHHHHHHHHCCCCCCcC----HHHH--------------HHHhCC----CCCCHHHHHHHHHHHHHhCCCCCCeEcH
Confidence            44679999999999999985    2222              233342    1233344   899999999999999999


Q ss_pred             HHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh-------------CCCC-Ch-HHHHHHHHhh
Q 042392          371 IEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE-------------NNMG-DD-ATIKEIISEV  431 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~-------------~~~~-~~-~e~~~~~~~~  431 (436)
                      +||+.++.......++++++.+|+.||+|++|+|+.+||+++|..             ++++ +. ++++.|++.+
T Consensus       199 dEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~iiH~~  274 (644)
T PLN02964        199 SEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMIHMT  274 (644)
T ss_pred             HHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHHHHH
Confidence            999999987655566788999999999999999999999999988             6666 33 6788888643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.46  E-value=3.5e-13  Score=115.74  Aligned_cols=129  Identities=19%  Similarity=0.191  Sum_probs=95.4

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEecc
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELC  109 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~~  109 (436)
                      ++.|+.|.++.||++...  +..|++|+......     ......+|+.+++.+.+...+++++....  ...++||||+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i   73 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFI   73 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEec
Confidence            467899999999999864  77899998754321     11245789999998853333455665543  2347999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCc-----ccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          110 QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV-----MHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-----~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +|.++...        .......+.+++.++..||+.++     +|+|++|.||++   + ++.++++|||.|..
T Consensus        74 ~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~---~-~~~~~liDf~~a~~  136 (170)
T cd05151          74 EGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL---D-DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE---E-CCeEEEEecccccC
Confidence            99877543        01123457889999999999885     999999999999   4 56799999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.43  E-value=2.8e-12  Score=110.75  Aligned_cols=90  Identities=19%  Similarity=0.170  Sum_probs=73.9

Q ss_pred             CChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---CC
Q 042392          112 GDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---EA  187 (436)
Q Consensus       112 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---~~  187 (436)
                      |+|.+++... .++++..++.++.|++.||.|||+.+      ||+|||+   +.++.+|+  ||++........   ..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~~~g~~~   69 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQSRVDPY   69 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccccCCCccc
Confidence            6899999874 45999999999999999999999998      9999999   77888998  999987644322   22


Q ss_pred             CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          188 SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       188 ~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..|||++.+ ..|+.++||||+|+++
T Consensus        70 y~aPE~~~~-~~~~~~~DiwSlG~il   94 (176)
T smart00750       70 FMAPEVIQG-QSYTEKADIYSLGITL   94 (176)
T ss_pred             ccChHHhcC-CCCcchhhHHHHHHHH
Confidence            338998876 5688999999995544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.43  E-value=8.8e-13  Score=112.18  Aligned_cols=122  Identities=26%  Similarity=0.440  Sum_probs=97.1

Q ss_pred             hccHHHHHHHHHHhCCC-CCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCc-cc
Q 042392          292 LERSEYLSKAFQYFDKD-NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGN-ID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~  369 (436)
                      ..+...+...|..+|.+ ++|+++.+||..++...               .++        ...++++.++.+++|. |+
T Consensus        29 ~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~---------------~Np--------~~~rI~~~f~~~~~~~~v~   85 (187)
T KOG0034|consen   29 ANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA---------------LNP--------LADRIIDRFDTDGNGDPVD   85 (187)
T ss_pred             HHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh---------------cCc--------HHHHHHHHHhccCCCCccC
Confidence            34556789999999999 99999999997653111               111        3678888899998888 99


Q ss_pred             HHHHHHHHHhhhccCCHH-HHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC-C--hHH----HHHHHHhhccCCC
Q 042392          370 FIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKEN-NMG-D--DAT----IKEIISEVGRDHK  436 (436)
Q Consensus       370 f~EF~~~~~~~~~~~~~~-~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~-~--~~e----~~~~~~~~d~~~d  436 (436)
                      |++|+..+.........+ .++-||++||.|++|+|+.+||..++..+ +.. +  ++.    ++.++.++|.|+|
T Consensus        86 F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~D  161 (187)
T KOG0034|consen   86 FEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGD  161 (187)
T ss_pred             HHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCC
Confidence            999999998887766665 89999999999999999999999999764 333 3  333    5667889999886

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=9e-15  Score=148.01  Aligned_cols=191  Identities=23%  Similarity=0.349  Sum_probs=153.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEEC-CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTEN-STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ....|.+.+.||+|+|+.|-.+... .+...+|+|.+......  ......+..|..+-+.+.+|+|++++++.......
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~--~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKS--EDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS   95 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCc--cchhhhcCccccccccccccccccccCCccCCCcc
Confidence            3567899999999999999887764 33556777766554311  23445566788888888669999999999999999


Q ss_pred             EEEEEeccCCCChHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCCcceeeccCCCC-cEEEEecCCc
Q 042392          102 VHVVMELCQGGDLFDRI-IAKG-YYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSA  177 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l-~~~~-~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~Nill~~~~~~~-~~kl~DFG~a  177 (436)
                      .+++++|..|++++..+ .... ..+...+..++.|+..++.|+| ..++.|||+||+|.++   +..+ .+++.|||+|
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLA  172 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhh
Confidence            99999999999999988 4443 5778889999999999999999 9999999999999999   5666 8999999999


Q ss_pred             ccccc-cC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          178 LLFEE-EG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       178 ~~~~~-~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      ..+.. .+           .....+||.+.+........|+||.|+..++...
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~  225 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT  225 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccccc
Confidence            87765 21           1222388988887677788999999877766554

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.41  E-value=1.3e-13  Score=140.44  Aligned_cols=145  Identities=28%  Similarity=0.386  Sum_probs=108.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|..++.|..|+||.||.++|+.+.+.+|+|+ .++..         +.|-  ++... ++|.+|            
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l---------ilRn--ilt~a-~npfvv------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL---------ILRN--ILTFA-GNPFVV------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch---------hhhc--ccccc-CCccee------------
Confidence            44679999999999999999999999999999954 33321         2221  33333 456655            


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                               |+...+++..++++..-        +.++.|||..||+|||+||.|.++   ..-|++|+.|||+++..-.
T Consensus       136 ---------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~GLm  195 (1205)
T KOG0606|consen  136 ---------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKGLM  195 (1205)
T ss_pred             ---------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhhhh
Confidence                     57777787767666443        678999999999999999999999   7889999999999875321


Q ss_pred             c-----------------------CCCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 E-----------------------GGEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~-----------------------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .                       ......+||++.+ +.|..++|.|++|...
T Consensus       196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIl  248 (1205)
T KOG0606|consen  196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIIL  248 (1205)
T ss_pred             hccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHH
Confidence            0                       1112228998887 6799999999985443

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.37  E-value=3.9e-12  Score=107.48  Aligned_cols=115  Identities=21%  Similarity=0.234  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...+...|...|+|+.|+|+-+||..++..                  ......+.+-++-|+..+|.+++|+|+|+||.
T Consensus        56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn------------------~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~  117 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRSGRILAKELQQALSN------------------GTWSPFSIETCRLMISMFDRDNSGTIGFKEFK  117 (221)
T ss_pred             cHHHHHHHHhhCccccccccHHHHHHHhhc------------------CCCCCCCHHHHHHHHHHhcCCCCCccCHHHHH
Confidence            456889999999999999999999765211                  12345566679999999999999999999999


Q ss_pred             HHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhcc
Q 042392          375 NLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGR  433 (436)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~  433 (436)
                      .+...+.      .++.+|+.||+|++|.|+..||+.+|..+|.. +.+-++-|+++.|.
T Consensus       118 ~Lw~~i~------~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~  171 (221)
T KOG0037|consen  118 ALWKYIN------QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDR  171 (221)
T ss_pred             HHHHHHH------HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhcc
Confidence            9998765      59999999999999999999999999999998 89989999999884

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=8.1e-11  Score=98.35  Aligned_cols=137  Identities=23%  Similarity=0.286  Sum_probs=96.4

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhH-----HHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN-----DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      ..+++|+-+.+|.+.+  -|.++.+|.=.++ ...++..     ...-.+|..++..+. --.|..-.=+..++....|+
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K-~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~   77 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPK-RYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIV   77 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCc-ccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEE
Confidence            3578999999999865  3556777753322 2222333     234567888888873 32333333333456667899


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||++|..|.+.+...       ...+++.+-.-+.-||..||+|+||.++||++    .++.+.++|||++..-..
T Consensus        78 me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl----~~~~i~~IDfGLg~~s~~  143 (204)
T COG3642          78 MEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIIL----SGGRIYFIDFGLGEFSDE  143 (204)
T ss_pred             EEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEE----eCCcEEEEECCccccccc
Confidence            9999998888788664       25577777778899999999999999999999    344599999999985433

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.28  E-value=6.5e-11  Score=108.80  Aligned_cols=144  Identities=16%  Similarity=0.240  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh-ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhh
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL-ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAK  337 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~-~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~  337 (436)
                      +..+..+|+.+|.+++|.++..+..+.+.....+ ...+..+..|+..|.|.||.+++.||..++..             
T Consensus        13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-------------   79 (463)
T KOG0036|consen   13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-------------   79 (463)
T ss_pred             HHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-------------
Confidence            4458899999999999999999998776655444 45667889999999999999999999766322             


Q ss_pred             hcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC
Q 042392          338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN  417 (436)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~  417 (436)
                                 .|.++..+|..+|.++||.|+-+|....+.+.....+.++..++|+..|++|++.|+.+|++..+... 
T Consensus        80 -----------~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~-  147 (463)
T KOG0036|consen   80 -----------KELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY-  147 (463)
T ss_pred             -----------hHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC-
Confidence                       23468899999999999999999999999988888888999999999999999999999999987632 


Q ss_pred             CCChHHHHHHHH
Q 042392          418 MGDDATIKEIIS  429 (436)
Q Consensus       418 ~~~~~e~~~~~~  429 (436)
                        .++.+++++.
T Consensus       148 --p~s~i~di~~  157 (463)
T KOG0036|consen  148 --PESDLEDIYD  157 (463)
T ss_pred             --ChhHHHHHHH
Confidence              3555666554

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.26  E-value=1e-10  Score=97.28  Aligned_cols=149  Identities=15%  Similarity=0.119  Sum_probs=108.1

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh-----hHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-----ENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ....|-+|+-+.|+++.+  .|+.+.||.-.... .+++     -......+|+..|.++. --.|.--.=++.+...-.
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~-YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKR-YRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeeccccc-ccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCe
Confidence            567889999999999986  47888888633221 1122     23445678999998874 333333333444555667


Q ss_pred             EEEeccCC-CChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          104 VVMELCQG-GDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       104 iv~e~~~~-g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |+|||++| .++.+++.+...  ........++++|-+.+.-||..+|+|+||..+||++...+....+-++|||++...
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            89999987 578888877532  222333688999999999999999999999999999976666667799999998754


Q ss_pred             c
Q 042392          181 E  181 (436)
Q Consensus       181 ~  181 (436)
                      .
T Consensus       167 ~  167 (229)
T KOG3087|consen  167 R  167 (229)
T ss_pred             c
Confidence            3

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.26  E-value=1.4e-10  Score=103.81  Aligned_cols=199  Identities=15%  Similarity=0.188  Sum_probs=138.5

Q ss_pred             hCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCc
Q 042392          233 MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY  312 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~  312 (436)
                      ++.+....+...+......+++..-+.+.+..++..+|.+++|.|+-.|....+.......-..+..+.|..+|+|.||.
T Consensus        50 ~~~dhe~~~~d~e~~~~fd~l~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~  129 (325)
T KOG4223|consen   50 FQYDHEAFLGDDEFADEFDQLTPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGF  129 (325)
T ss_pred             cCccccccccchhhhhhhhhhCcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccce
Confidence            34445556666677777777776667788999999999999999999999999887766666677889999999999999


Q ss_pred             hhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCC-HHHHHH
Q 042392          313 DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLET-PELLEK  391 (436)
Q Consensus       313 i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~-~~~~~~  391 (436)
                      |+.++......-...    ........-....+..+. ..-.+.|+..|.|+||.+|.+||..++..-..... +=.++.
T Consensus       130 i~~eey~~~~~~~~~----~~~~~~d~e~~~~~~km~-~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~E  204 (325)
T KOG4223|consen  130 ITWEEYLPQTYGRVD----LPDEFPDEEDNEEYKKMI-ARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAE  204 (325)
T ss_pred             eeHHHhhhhhhhccc----CccccccchhcHHHHHHH-HHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHH
Confidence            999998754221100    000000000001111111 13457888999999999999999998865432211 123778


Q ss_pred             HHHhhccCCCCcccHHHHHHHHHhCCC----C--ChHHHHHHHHhhccCCC
Q 042392          392 AFQYLDKNSDQFITVNELETAFKENNM----G--DDATIKEIISEVGRDHK  436 (436)
Q Consensus       392 ~F~~~D~d~~G~I~~~el~~~l~~~~~----~--~~~e~~~~~~~~d~~~d  436 (436)
                      ...-.|+||||+|+.+|+..-|-....    +  ..-|-+.+....|.|+|
T Consensus       205 tl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkD  255 (325)
T KOG4223|consen  205 TLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKD  255 (325)
T ss_pred             HHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCC
Confidence            888899999999999999987755321    2  22345677777788876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.22  E-value=9e-12  Score=109.00  Aligned_cols=186  Identities=12%  Similarity=0.103  Sum_probs=133.6

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +....-.....++.+|...-.|..|+|++..  ..+++|++......  ......+..|.-.|+-+ .||||..+++.+.
T Consensus       183 r~~gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t--~risrdfneefp~lrif-shpnilpvlgacn  257 (448)
T KOG0195|consen  183 RYTGIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVT--ARISRDFNEEFPALRIF-SHPNILPVLGACN  257 (448)
T ss_pred             cccCcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcc--hhhcchhhhhCcceeee-cCCchhhhhhhcc
Confidence            3344455566778889999999999999864  44667777544332  12334577788888888 5999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEE--E
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLK--V  171 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~k--l  171 (436)
                      .+.++.++..|++.|+|+..+.....  ++..++.+++..++.|+.|||+..  |..--|....+++   +++-+.+  .
T Consensus       258 sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarism  334 (448)
T KOG0195|consen  258 SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISM  334 (448)
T ss_pred             CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheec
Confidence            99999999999999999999987654  677889999999999999999864  4445688888888   5554444  4


Q ss_pred             EecCCccccccc-CCCCCCChHHHHHHHHH--HHhhhhhhHHH
Q 042392          172 TDFGSALLFEEE-GGEASDDTSVILRMKQF--RRMSKLKKLTV  211 (436)
Q Consensus       172 ~DFG~a~~~~~~-~~~~~~~pe~~~~~~~~--~~~~d~~s~~~  211 (436)
                      +|--++..-... ...+..+||.+.+...-  -.++|+||+++
T Consensus       335 ad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfai  377 (448)
T KOG0195|consen  335 ADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAI  377 (448)
T ss_pred             ccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHH
Confidence            443333221111 11233389988864432  36889999843

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=1.6e-11  Score=119.32  Aligned_cols=188  Identities=18%  Similarity=0.148  Sum_probs=149.5

Q ss_pred             cccccceeeeeeecc--cCCeEEEEEEE--CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGR--GRFGVTYLCTE--NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ..+...+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+......  .....-.+|+...+.+..|+|.++.+..+
T Consensus       110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p--~~~~~k~~~~~s~~~i~~~~~~v~~~~~~  187 (524)
T KOG0601|consen  110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP--LDSKRKLREFLSHHKIDSHENPVRDSPAW  187 (524)
T ss_pred             chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc--cccccccchhhcccccCccccccccCccc
Confidence            456667888999999  99999999988  8889999999743332211  11223356777777776799999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHH----HHHHHHHcCcccccCCCCcceeeccCCC-CcEE
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVN----AVNVCHSMGVMHRDLKPENFCFISRDDN-ALLK  170 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~----~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~k  170 (436)
                      ...+..|+-+|+|. .+|..+...... ++...++..+.+...    ||.++|..+++|-|+||.||++   ..+ ..++
T Consensus       188 e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~~  263 (524)
T KOG0601|consen  188 EGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSCK  263 (524)
T ss_pred             ccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---ccccceee
Confidence            99999999999995 588888877655 889999999999999    9999999999999999999999   555 7899


Q ss_pred             EEecCCcccccccCC-------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHh
Q 042392          171 VTDFGSALLFEEEGG-------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVE  216 (436)
Q Consensus       171 l~DFG~a~~~~~~~~-------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~  216 (436)
                      ++|||+...+.+..-             ....+||++.+  -++...|+.+++..++..
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~  320 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEA  320 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhh
Confidence            999999988765431             11127888876  467889999997766543

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=99.15  E-value=1.4e-10  Score=98.99  Aligned_cols=204  Identities=17%  Similarity=0.219  Sum_probs=134.9

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-CCCC--CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhcc----
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSML--TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLER----  294 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-~~~~--s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~----  294 (436)
                      ....+..+|.+.|.+.++.|+..|++.++..- ..++  +.++-+.-|...|.|+||.|+|+||...+......+.    
T Consensus        99 srrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekeva  178 (362)
T KOG4251|consen   99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVA  178 (362)
T ss_pred             HHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHH
Confidence            34567889999999999999999999998752 1111  2334556677789999999999999877654322111    


Q ss_pred             ----------HHHHHHHHHHhCCCCCCchhh--hhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc
Q 042392          295 ----------SEYLSKAFQYFDKDNSGYDEF--RAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI  362 (436)
Q Consensus       295 ----------~~~l~~~F~~~D~~~~G~i~~--~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  362 (436)
                                ..+-.+.|..-+++..|..+.  .++   +.+-+++-.++...        -...+-...+.++++.+|+
T Consensus       179 dairlneelkVDeEtqevlenlkdRwyqaDsppadl---llteeEflsFLHPE--------hSrgmLrfmVkeivrdlDq  247 (362)
T KOG4251|consen  179 DAIRLNEELKVDEETQEVLENLKDRWYQADSPPADL---LLTEEEFLSFLHPE--------HSRGMLRFMVKEIVRDLDQ  247 (362)
T ss_pred             HHhhccCcccccHHHHHHHHhhhhhhccccCchhhh---hhhHHHHHHHcChH--------hhhhhHHHHHHHHHHHhcc
Confidence                      122345555566677766543  111   11222222222111        1122233468899999999


Q ss_pred             CCCCcccHHHHHHHHH-hhhcc----CCH---HHHHHHH-HhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhc
Q 042392          363 DGNGNIDFIEFVNLMT-DIYKL----ETP---ELLEKAF-QYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVG  432 (436)
Q Consensus       363 ~~~g~i~f~EF~~~~~-~~~~~----~~~---~~~~~~F-~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d  432 (436)
                      |+|..++-.||+...- .+...    .+.   +.-++-| ...|.|.||.+|++||...+.+++.. +-.|+..++.-.|
T Consensus       248 dgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d  327 (362)
T KOG4251|consen  248 DGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTD  327 (362)
T ss_pred             CCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhc
Confidence            9999999999998542 22111    111   2234455 44699999999999999998887766 7888999998888


Q ss_pred             cCCC
Q 042392          433 RDHK  436 (436)
Q Consensus       433 ~~~d  436 (436)
                      .|+|
T Consensus       328 ~n~~  331 (362)
T KOG4251|consen  328 ANND  331 (362)
T ss_pred             cCCC
Confidence            7765

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.14  E-value=2.7e-10  Score=102.21  Aligned_cols=141  Identities=25%  Similarity=0.332  Sum_probs=99.7

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC-CCCeeeceeeeecC---CeEEEEE
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG-QPNIVELKSAHEDE---TAVHVVM  106 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~---~~~~iv~  106 (436)
                      +.||.|..+.||++... .|..+++|........   .....+.+|..+++.+.. +.++++++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence            56899999999999864 3688999987554321   123457899999999853 24567777776553   3678999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 042392          107 ELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-----------------------------------------  145 (436)
Q Consensus       107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-----------------------------------------  145 (436)
                      ||++|.++.+.+.. ..++......++.+++.+|..||+                                         
T Consensus        80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (223)
T cd05154          80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME  158 (223)
T ss_pred             EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence            99999877654421 234555555566666666666652                                         


Q ss_pred             ---------------cCcccccCCCCcceeeccCC--CCcEEEEecCCccc
Q 042392          146 ---------------MGVMHRDLKPENFCFISRDD--NALLKVTDFGSALL  179 (436)
Q Consensus       146 ---------------~~i~Hrdlkp~Nill~~~~~--~~~~kl~DFG~a~~  179 (436)
                                     ..++|+|+.|.||++   +.  .+.+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~---~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLF---HPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHhhCCCCCCcEEEECCCCcccEEE---cCCCCcEEEEEecccccc
Confidence                           246899999999999   44  45689999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.13  E-value=3.2e-09  Score=104.55  Aligned_cols=142  Identities=14%  Similarity=0.167  Sum_probs=113.3

Q ss_pred             eeeeeeecccCCeEEE-EEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           27 YSFGRMLGRGRFGVTY-LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~-~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      |++ ...+-++.+ || .|..+.++.+|.|.+......    .....+.+-++.|+.+ .||||+++++.++..+.+|+|
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylv   87 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLV   87 (690)
T ss_pred             ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEE
Confidence            444 333334443 34 466678899999998876653    2344577888999999 599999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|-+.  .|-.++++.+   ...+...+.||+.||.||| .++++|++|.-..+++   +..|..||++|-++......
T Consensus        88 TErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~  158 (690)
T KOG1243|consen   88 TERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGF  158 (690)
T ss_pred             eeccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccC
Confidence            99984  6777777644   6777888999999999997 7899999999999999   78899999999888665443

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.11  E-value=8.7e-11  Score=83.57  Aligned_cols=66  Identities=32%  Similarity=0.529  Sum_probs=49.9

Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++++|+.+|+|++|+|+..||..++..+              +... ......+.+..+++.+|+|+||.|+|+||+.+
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   65 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHL--------------GRDM-SDEESDEMIDQIFREFDTDGDGRISFDEFLNF   65 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHT--------------TSHS-THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHh--------------cccc-cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence            37899999999999999999997653332              1111 13445557788899999999999999999886


Q ss_pred             H
Q 042392          377 M  377 (436)
Q Consensus       377 ~  377 (436)
                      |
T Consensus        66 ~   66 (66)
T PF13499_consen   66 M   66 (66)
T ss_dssp             H
T ss_pred             C
Confidence            5

...

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.09  E-value=1.3e-10  Score=86.83  Aligned_cols=69  Identities=14%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             cHHHHHHHHHHhCC-CCCCchhhhhhhcCcch-hhhHHHHhhhhhhhcCCCCchhhhhH-HHHHHHHHccccCCCCcccH
Q 042392          294 RSEYLSKAFQYFDK-DNSGYDEFRAMVESPQT-IRNVSHIYTDKAKKFGLGNTKQFRAM-NMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       294 ~~~~l~~~F~~~D~-~~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ....+..+|+.||+ +++|+|+..||+..+.. +                   +..++. .+++++++.+|.|+||.|+|
T Consensus         6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~el-------------------g~~ls~~~~v~~mi~~~D~d~DG~I~F   66 (89)
T cd05022           6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQL-------------------PHLLKDVEGLEEKMKNLDVNQDSKLSF   66 (89)
T ss_pred             HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHh-------------------hhhccCHHHHHHHHHHhCCCCCCCCcH
Confidence            45678999999999 99999999999766333 2                   222333 57999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        67 ~EF~~l~~~l~   77 (89)
T cd05022          67 EEFWELIGELA   77 (89)
T ss_pred             HHHHHHHHHHH
Confidence            99999887654

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.05  E-value=1.1e-10  Score=111.55  Aligned_cols=176  Identities=19%  Similarity=0.221  Sum_probs=118.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee-------e
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS-------A   95 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-------~   95 (436)
                      .+.+.+..+..++|.+....-...   ...++-+......    ........+++-.+.....|+..+ +.+       .
T Consensus       245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~----~~~~~~~~r~~~~l~~~~~~~~s~-~~d~~~s~~~~  319 (516)
T KOG1033|consen  245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDS----LCACKYTFRQLGVLVDSSHSNRSI-LEDLRPSLFES  319 (516)
T ss_pred             cccccccccccccCCchhhhhcccchhhhhccchhhhccc----hhhhhhhhhhhhheeccccCCccc-ccCCCCchhhh
Confidence            355556666666666655432222   2222222221111    122234556666666664344433 332       1


Q ss_pred             ee-----cCCeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           96 HE-----DETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        96 ~~-----~~~~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      +.     ....+||.|++|.-.+|.+++.....   .+......++.|+..|+.|   ++.+|||+||.||+.   ..+.
T Consensus       320 ~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~  393 (516)
T KOG1033|consen  320 SKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDD  393 (516)
T ss_pred             ccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccch
Confidence            11     12358999999999999999975432   5677888999999999999   999999999999999   5666


Q ss_pred             cEEEEecCCcccccccCC--------------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          168 LLKVTDFGSALLFEEEGG--------------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~~~--------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .+||.|||+.........              ....+||.+.+ +.|+.++||+++|+.+
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil  452 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLIL  452 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHH
Confidence            899999999987766541              12228999988 6899999999995544

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.04  E-value=1.6e-09  Score=93.42  Aligned_cols=131  Identities=19%  Similarity=0.176  Sum_probs=83.1

Q ss_pred             EEEEEEECCCCceEEEEEeecCCcc----------------------chhhHHHHHHHHHHHHHhcCCC-CCeeeceeee
Q 042392           40 VTYLCTENSTNMPYACKSMAKKPKM----------------------KYAENDMMIRREIQIRRLLSGQ-PNIVELKSAH   96 (436)
Q Consensus        40 ~V~~~~~~~~~~~~aiK~~~~~~~~----------------------~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~   96 (436)
                      .||.|.. ..|..+|||+.+.....                      ..........+|...|..+... -++++.+.+.
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            4899987 56789999987543110                      0012234577899999999533 3677777653


Q ss_pred             ecCCeEEEEEeccC--CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           97 EDETAVHVVMELCQ--GGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV-CHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        97 ~~~~~~~iv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~-lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                          .-.|||||++  |..+.. +.... ++......++.+++..+.. +|..||+|+||.+.||++   +. +.+.++|
T Consensus        80 ----~~~ivME~I~~~G~~~~~-l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv---~~-~~~~iID  149 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPR-LKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV---DD-GKVYIID  149 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGC-HHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE---ET-TCEEE--
T ss_pred             ----CCEEEEEecCCCccchhh-HHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe---ec-ceEEEEe
Confidence                2379999998  644433 33321 2245567788888885555 579999999999999999   33 3899999


Q ss_pred             cCCccccc
Q 042392          174 FGSALLFE  181 (436)
Q Consensus       174 FG~a~~~~  181 (436)
                      ||.|....
T Consensus       150 f~qav~~~  157 (188)
T PF01163_consen  150 FGQAVDSS  157 (188)
T ss_dssp             GTTEEETT
T ss_pred             cCcceecC
Confidence            99987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.02  E-value=3.2e-09  Score=103.35  Aligned_cols=129  Identities=22%  Similarity=0.289  Sum_probs=104.6

Q ss_pred             HhcCCCCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCc-ccccCCCCcc
Q 042392           81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGV-MHRDLKPENF  158 (436)
Q Consensus        81 ~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~Hrdlkp~Ni  158 (436)
                      +.+ .|.|+.++++...++...++|.+||+.|+|.+.+... -.++......+++.|+.|+.|||...| .|+.|++.|.
T Consensus         2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            456 5999999999999999999999999999999999873 347777888899999999999998776 8999999999


Q ss_pred             eeeccCCCCcEEEEecCCcccccccCC----C------CCCChHHHHHHH--H----HHHhhhhhhHHHHH
Q 042392          159 CFISRDDNALLKVTDFGSALLFEEEGG----E------ASDDTSVILRMK--Q----FRRMSKLKKLTVKV  213 (436)
Q Consensus       159 ll~~~~~~~~~kl~DFG~a~~~~~~~~----~------~~~~pe~~~~~~--~----~~~~~d~~s~~~~~  213 (436)
                      ++   +..+.+||+|||+.........    .      ...+||.+.+..  .    -+...|++|+++.+
T Consensus        81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~  148 (484)
T KOG1023|consen   81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM  148 (484)
T ss_pred             ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence            99   8889999999999887743100    0      112888877632  1    35678999985543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.02  E-value=1.3e-10  Score=113.09  Aligned_cols=190  Identities=18%  Similarity=0.225  Sum_probs=145.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEEC-CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTEN-STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....+|..+..||.|.|+.|+.+.-. .++..|++|.+.......  .....-..|+.+...+.-|.++++++..|...
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~--~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF--ASDIFSLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch--HhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence            345567889999999999999997755 678899999876554332  22233456777777766799999999999888


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ...|+-.|||.++++...+.....+.+...+.+..|++.++.++|+..++|+|+||.||++...  ++..++.|||++..
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFSKLGDFGCWTR  416 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhhhccccccccc
Confidence            8899999999999887776555568889999999999999999999999999999999999431  27889999999874


Q ss_pred             ccccC-----CCCCC-ChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEG-----GEASD-DTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~-----~~~~~-~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +.-..     ..... .++++.....+....|+.++++.+.
T Consensus       417 ~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~  457 (524)
T KOG0601|consen  417 LAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVD  457 (524)
T ss_pred             cceecccccccccccccchhhcccccccccccccccccccc
Confidence            32211     11112 3666666666777888888865543

>PLN02964 phosphatidylserine decarboxylase

Probab=98.98  E-value=2.1e-09  Score=107.94  Aligned_cols=103  Identities=14%  Similarity=0.220  Sum_probs=90.0

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC-CCCCHHH---HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFD---VKQLMEAADMDGNGAIDYTEFTAATIQRQKLE  293 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~-~~~s~~~---i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~  293 (436)
                      +...+...++++|..+|.+++|.+    +...++.++ ..+++.+   ++.+|+.+|.|++|.|+|.||+..+.......
T Consensus       137 f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~  212 (644)
T PLN02964        137 FVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV  212 (644)
T ss_pred             ccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC
Confidence            466678999999999999999996    888888899 5888887   89999999999999999999999887554446


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcch
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQT  324 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~  324 (436)
                      ..++++++|+.||+|++|+|+.+||...+..
T Consensus       213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        213 AANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            6778999999999999999999999876444

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.97  E-value=7.8e-10  Score=82.78  Aligned_cols=74  Identities=19%  Similarity=0.341  Sum_probs=57.2

Q ss_pred             cHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....++++|+.|| +||+| +|+..||+..+.+  ++...+            +..++++++.++++.+|.|++|.|+|+
T Consensus         6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~--~~~~~l------------g~~~~~~~v~~~i~~~D~n~dG~v~f~   71 (88)
T cd05027           6 AMVALIDVFHQYSGREGDKHKLKKSELKELINN--ELSHFL------------EEIKEQEVVDKVMETLDSDGDGECDFQ   71 (88)
T ss_pred             HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHH--HhHHHh------------cCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            3457899999998 89999 5999999876433  111111            344566789999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++....
T Consensus        72 eF~~li~~~~   81 (88)
T cd05027          72 EFMAFVAMVT   81 (88)
T ss_pred             HHHHHHHHHH
Confidence            9999887653

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.96  E-value=2.6e-08  Score=91.14  Aligned_cols=138  Identities=17%  Similarity=0.083  Sum_probs=92.6

Q ss_pred             EEEEEEECCCCceEEEEEeecCCcc---ch----hhHHHHHHHHHHHHHhcCC-CCCeeeceeeeec-----CCeEEEEE
Q 042392           40 VTYLCTENSTNMPYACKSMAKKPKM---KY----AENDMMIRREIQIRRLLSG-QPNIVELKSAHED-----ETAVHVVM  106 (436)
Q Consensus        40 ~V~~~~~~~~~~~~aiK~~~~~~~~---~~----~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~-----~~~~~iv~  106 (436)
                      .|.++..  .|+.|.||........   +.    ......+.+|...+..|.. .-.++..+.+++.     ...-++||
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt  114 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT  114 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence            3555543  4667888865332210   00    0011136788888877731 1223333444432     23578999


Q ss_pred             eccCCC-ChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec----cCCCCcEEEEecCCccc
Q 042392          107 ELCQGG-DLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS----RDDNALLKVTDFGSALL  179 (436)
Q Consensus       107 e~~~~g-~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~----~~~~~~~kl~DFG~a~~  179 (436)
                      |++++. +|.+++..  ..+.+......++.++...+.-||..||+|+|++|.|||+..    .+....+.++||+.+..
T Consensus       115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            999875 78888764  234566778899999999999999999999999999999953    12356899999998864

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.94  E-value=2.6e-09  Score=75.88  Aligned_cols=61  Identities=23%  Similarity=0.342  Sum_probs=52.6

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhccCCH----HHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETP----ELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~----~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                      +.++|+.+|.|++|.|+.+||..++........+    +.++.+|+.+|+|+||.|+.+||..++
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            6789999999999999999999999887654333    456777999999999999999999864

...

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.84  E-value=1.1e-08  Score=76.47  Aligned_cols=67  Identities=16%  Similarity=0.294  Sum_probs=61.3

Q ss_pred             hHHHHHHHhhhhCC-CCCCccCHHHHHHHHHh-cCCCCCH-HHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          222 ETQALKEKFIEMDT-DKNGTLSYDELRAGLTK-VGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       222 ~~~~l~~~F~~~D~-~~~g~i~~~eL~~~l~~-~~~~~s~-~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+..+..+|..+|. +++|+|+..||+..+.. +|..++. ++++.+++.+|.|+||.|+|+||+..+..
T Consensus         6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~   75 (89)
T cd05022           6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE   75 (89)
T ss_pred             HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            45678899999999 99999999999999999 8888888 99999999999999999999999887643

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.83  E-value=3.5e-08  Score=87.70  Aligned_cols=141  Identities=18%  Similarity=0.219  Sum_probs=102.6

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc----------------ch--hhHHHHHHHHHHHHHhcCCC-C
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM----------------KY--AENDMMIRREIQIRRLLSGQ-P   87 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------------~~--~~~~~~~~~E~~~l~~l~~h-~   87 (436)
                      +.++..||-|.-|.||.|.+. .|.++|||.=+.....                ..  -......++|..+|..|..+ -
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            567789999999999999975 7899999963321100                00  11234578999999999422 2


Q ss_pred             CeeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        88 niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      .|++.+++    +...+||||++|-.|...-     +....+..++..|+.-+.-+-..||||+|+.+=||++   +++|
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg  239 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG  239 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence            56666654    4568999999986664321     2345566677777777776668999999999999999   7888


Q ss_pred             cEEEEecCCcccc
Q 042392          168 LLKVTDFGSALLF  180 (436)
Q Consensus       168 ~~kl~DFG~a~~~  180 (436)
                      .+.++||--+...
T Consensus       240 ~~~vIDwPQ~v~~  252 (304)
T COG0478         240 DIVVIDWPQAVPI  252 (304)
T ss_pred             CEEEEeCcccccC
Confidence            9999999776544

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.83  E-value=4.7e-09  Score=79.77  Aligned_cols=75  Identities=20%  Similarity=0.240  Sum_probs=55.3

Q ss_pred             ccHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....+.++|+.|| +||+| +|+..||+..+...      +.   ..  +   ....+..++.++++.+|.|+||.|+|
T Consensus         7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~------~~---~~--~---~~~~~~~~v~~i~~elD~n~dG~Idf   72 (93)
T cd05026           7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRE------LT---DF--L---SSQKDPMLVDKIMNDLDSNKDNEVDF   72 (93)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHH------hH---Hh--c---ccccCHHHHHHHHHHhCCCCCCCCCH
Confidence            34567899999999 79998 59999997653221      00   00  0   11124557999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        73 ~EF~~l~~~l~   83 (93)
T cd05026          73 NEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHH
Confidence            99999987654

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.81  E-value=6e-08  Score=85.80  Aligned_cols=110  Identities=20%  Similarity=0.191  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHhcC-CCCCeeeceeeeecC----CeEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Q 042392           71 MMIRREIQIRRLLS-GQPNIVELKSAHEDE----TAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH  144 (436)
Q Consensus        71 ~~~~~E~~~l~~l~-~h~niv~~~~~~~~~----~~~~iv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH  144 (436)
                      ....+|...+..|. ..-.+++.+.+.+..    ...++|+|++++ .+|.+++......+......++.++...+.-||
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            45677887776663 123345555555442    245899999987 479998887555677778899999999999999


Q ss_pred             HcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       145 ~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..||+|+|++|.|||+...+....+.++||+-++..
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            999999999999999954333458999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.76  E-value=1.1e-08  Score=77.86  Aligned_cols=74  Identities=22%  Similarity=0.273  Sum_probs=56.1

Q ss_pred             cHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..+.++++|+.|| .+++| +|+..||..++...             +|.. .+..++++++.++++.+|.|++|.|+|+
T Consensus         7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~-------------lg~~-~~~~~s~~~v~~i~~~~D~d~~G~I~f~   72 (92)
T cd05025           7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTE-------------LSDF-LDAQKDADAVDKIMKELDENGDGEVDFQ   72 (92)
T ss_pred             HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHH-------------HHHH-ccCCCCHHHHHHHHHHHCCCCCCcCcHH
Confidence            3467999999997 99999 59999997664220             0100 0123456689999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++..+.
T Consensus        73 eF~~l~~~~~   82 (92)
T cd05025          73 EFVVLVAALT   82 (92)
T ss_pred             HHHHHHHHHH
Confidence            9999887654

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.75  E-value=1.2e-08  Score=77.94  Aligned_cols=72  Identities=19%  Similarity=0.267  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhCC-CC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          295 SEYLSKAFQYFDK-DN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       295 ~~~l~~~F~~~D~-~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...++.+|+.||. |+ +|+|+..||..++...  +..            ..+..++++++..+++.+|.|++|.|+|+|
T Consensus         7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~--~g~------------~lg~~~s~~ei~~~~~~~D~~~dg~I~f~e   72 (94)
T cd05031           7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKE--LSE------------FLKNQKDPMAVDKIMKDLDQNRDGKVNFEE   72 (94)
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHH--hHH------------HhhccccHHHHHHHHHHhCCCCCCcCcHHH
Confidence            4568999999997 97 7999999997653321  000            012344667899999999999999999999


Q ss_pred             HHHHHHhh
Q 042392          373 FVNLMTDI  380 (436)
Q Consensus       373 F~~~~~~~  380 (436)
                      |+.++...
T Consensus        73 F~~l~~~~   80 (94)
T cd05031          73 FVSLVAGL   80 (94)
T ss_pred             HHHHHHHH
Confidence            99988654

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.74  E-value=1.3e-08  Score=76.23  Aligned_cols=72  Identities=14%  Similarity=0.138  Sum_probs=56.4

Q ss_pred             cHHHHHHHHHHhCC-CC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFDK-DN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D~-~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+-.+|..||. || +|+|+..||+..+....           .     .+.+++++++.++++.+|.|++|.|+|+
T Consensus         8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~-----------~-----lg~k~t~~ev~~m~~~~D~d~dG~Idf~   71 (88)
T cd05029           8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKEL-----------T-----IGSKLQDAEIAKLMEDLDRNKDQEVNFQ   71 (88)
T ss_pred             HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHH-----------h-----cCCCCCHHHHHHHHHHhcCCCCCCCcHH
Confidence            34568899999998 77 89999999976632100           0     1445677899999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++..+.
T Consensus        72 EFv~lm~~l~   81 (88)
T cd05029          72 EYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHH
Confidence            9999887654

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=98.74  E-value=3.1e-08  Score=92.13  Aligned_cols=137  Identities=18%  Similarity=0.224  Sum_probs=91.7

Q ss_pred             cCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhh
Q 042392          270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA  349 (436)
Q Consensus       270 d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (436)
                      +.+.+|-|+|.||+-.+.-  ...+...++-+|++||.||||.|+.+||..+...+..   .-.-..+..+...++....
T Consensus       209 ~lg~~GLIsfSdYiFLlTl--LS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~s---Q~~~g~~hrd~~tt~~s~~  283 (489)
T KOG2643|consen  209 KLGESGLISFSDYIFLLTL--LSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRS---QTSVGVRHRDHFTTGNSFK  283 (489)
T ss_pred             EcCCCCeeeHHHHHHHHHH--HccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHh---ccccceecccCccccceeh
Confidence            5678899999999865432  2334456889999999999999999999765322211   1000000000001111111


Q ss_pred             HHHHHH--HHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          350 MNMLKK--LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       350 ~~~~~~--~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      . ++..  ...-+-.+++++++++||..++....    .|-++.-|..||+..+|.|+..+|-.+|.-.
T Consensus       284 ~-~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~  347 (489)
T KOG2643|consen  284 V-EVNSALLTYFFGKRGNGKLSIDEFLKFQENLQ----EEILELEFERFDKGDSGAISEVDFAELLLAY  347 (489)
T ss_pred             h-hhhhhHHHHhhccCCCccccHHHHHHHHHHHH----HHHHHHHHHHhCcccccccCHHHHHHHHHHH
Confidence            0 1222  22236789999999999999998754    4568889999999999999999999988653

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.71  E-value=3.6e-07  Score=87.77  Aligned_cols=162  Identities=14%  Similarity=0.171  Sum_probs=115.6

Q ss_pred             eEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC----CeEEEEEeccCC-CC
Q 042392           39 GVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE----TAVHVVMELCQG-GD  113 (436)
Q Consensus        39 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~----~~~~iv~e~~~~-g~  113 (436)
                      .+.|+|...-+|..|++|.++......    ......=++.++++ .|+|||++.++|.+.    ..+.+|++|.++ ++
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~----~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T  364 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQS----TNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT  364 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccC----cccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence            478999999999999999994332111    11122446778888 599999999999743    458999999886 46


Q ss_pred             hHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          114 LFDRIIAK---------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       114 L~~~l~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      |.++--..               ...+|..+|.++.|+..||.++|+.|+.-+-|.|.+|++   ..+.+++|+-.|..-
T Consensus       365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~D  441 (655)
T KOG3741|consen  365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIMD  441 (655)
T ss_pred             HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEeccccee
Confidence            76654221               236789999999999999999999999999999999999   455588888777665


Q ss_pred             cccccCCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC
Q 042392          179 LFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       179 ~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l  218 (436)
                      .+..+..      +.+..    ....|+-.+|..+++-..
T Consensus       442 vl~~d~~------~~le~----~Qq~D~~~lG~ll~aLAt  471 (655)
T KOG3741|consen  442 VLQEDPT------EPLES----QQQNDLRDLGLLLLALAT  471 (655)
T ss_pred             eecCCCC------cchhH----HhhhhHHHHHHHHHHHhh
Confidence            5544331      22222    234566666665554433

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.71  E-value=8.5e-08  Score=71.79  Aligned_cols=67  Identities=25%  Similarity=0.381  Sum_probs=60.6

Q ss_pred             hHHHHHHHhhhhC-CCCCC-ccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          222 ETQALKEKFIEMD-TDKNG-TLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       222 ~~~~l~~~F~~~D-~~~~g-~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+..+..+|..+| .+++| .|+.+||+..++.     ++..+++++++.+++.+|.|++|+|+|+||+..+..
T Consensus         6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027           6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3567889999998 79999 5999999999999     888899999999999999999999999999987643

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.70  E-value=2.1e-08  Score=57.67  Aligned_cols=29  Identities=31%  Similarity=0.446  Sum_probs=24.9

Q ss_pred             HHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          388 LLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       388 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      +++.+|+.||+|+||+|+.+||+.+|+.+
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence            47889999999999999999999988753

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>smart00027 EH Eps15 homology domain

Probab=98.69  E-value=2.3e-08  Score=76.72  Aligned_cols=68  Identities=28%  Similarity=0.304  Sum_probs=52.6

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+...++++|+.+|.|++|.|+..++..++.              ..|       ++++++.++++.+|.+++|.|+|+|
T Consensus         7 ~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~--------------~~~-------~~~~ev~~i~~~~d~~~~g~I~~~e   65 (96)
T smart00027        7 EDKAKYEQIFRSLDKNQDGTVTGAQAKPILL--------------KSG-------LPQTLLAKIWNLADIDNDGELDKDE   65 (96)
T ss_pred             HHHHHHHHHHHHhCCCCCCeEeHHHHHHHHH--------------HcC-------CCHHHHHHHHHHhcCCCCCCcCHHH
Confidence            3456789999999999999999888876522              112       2345788999999999999999999


Q ss_pred             HHHHHHhhh
Q 042392          373 FVNLMTDIY  381 (436)
Q Consensus       373 F~~~~~~~~  381 (436)
                      |+.++..+.
T Consensus        66 F~~~~~~~~   74 (96)
T smart00027       66 FALAMHLIY   74 (96)
T ss_pred             HHHHHHHHH
Confidence            998876543

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=98.68  E-value=9.8e-08  Score=88.84  Aligned_cols=170  Identities=21%  Similarity=0.263  Sum_probs=112.2

Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHh------cCC--------CCCH-HHHHHHHH--HHcCCCCCcccHHHHHHHHH
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTK------VGS--------MLTE-FDVKQLME--AADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~------~~~--------~~s~-~~i~~l~~--~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...-+|..+|.|++|.|+.+|+.....-      ++.        ..+. .++..-+.  -+-.++++.++++||+..+-
T Consensus       234 ~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e  313 (489)
T KOG2643|consen  234 NFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQE  313 (489)
T ss_pred             cceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHH
Confidence            4567899999999999999999875531      111        1111 12222222  25788999999999998764


Q ss_pred             hhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCc
Q 042392          288 QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGN  367 (436)
Q Consensus       288 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~  367 (436)
                      .-    +.+-++--|..+|+..+|.|+..+|...+....             +.+   .......+.++.++++.+ +-.
T Consensus       314 ~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a-------------~~n---~~~k~~~lkrvk~kf~~~-~~g  372 (489)
T KOG2643|consen  314 NL----QEEILELEFERFDKGDSGAISEVDFAELLLAYA-------------GVN---SKKKHKYLKRVKEKFKDD-GKG  372 (489)
T ss_pred             HH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHHc-------------ccc---hHhHHHHHHHHHHhccCC-CCC
Confidence            33    334567789999999999999999976532221             111   111112456666666655 667


Q ss_pred             ccHHHHHHHHHhhhc----------------cCCHH-----------------HHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          368 IDFIEFVNLMTDIYK----------------LETPE-----------------LLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       368 i~f~EF~~~~~~~~~----------------~~~~~-----------------~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      |+++||..++.-..+                ..+..                 .+.-+|..||.|+||.+|.+||..+|+
T Consensus       373 ISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk  452 (489)
T KOG2643|consen  373 ISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMK  452 (489)
T ss_pred             cCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHH
Confidence            888888876632211                11222                 244678889999999999999999996


Q ss_pred             h
Q 042392          415 E  415 (436)
Q Consensus       415 ~  415 (436)
                      .
T Consensus       453 ~  453 (489)
T KOG2643|consen  453 R  453 (489)
T ss_pred             H
Confidence            5

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.66  E-value=3.8e-08  Score=74.25  Aligned_cols=74  Identities=18%  Similarity=0.262  Sum_probs=56.0

Q ss_pred             ccHHHHHHHHHHhCC--CCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDK--DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~--~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .+.+.++.+|..||+  |++|.|+..+|..++...             +|.. .+...++.++..+++.+|.|++|.|+|
T Consensus         5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~-------------~g~~-~~~~~~~~ei~~i~~~~d~~~~g~I~f   70 (88)
T cd00213           5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETE-------------LPNF-LKNQKDPEAVDKIMKDLDVNKDGKVDF   70 (88)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHH-------------hhhh-ccCCCCHHHHHHHHHHhccCCCCcCcH
Confidence            445679999999999  899999999997653220             1110 012234668999999999999999999


Q ss_pred             HHHHHHHHhh
Q 042392          371 IEFVNLMTDI  380 (436)
Q Consensus       371 ~EF~~~~~~~  380 (436)
                      +||+.++...
T Consensus        71 ~eF~~~~~~~   80 (88)
T cd00213          71 QEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHH
Confidence            9999988754

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>smart00027 EH Eps15 homology domain

Probab=98.65  E-value=1.7e-07  Score=71.89  Aligned_cols=71  Identities=24%  Similarity=0.383  Sum_probs=64.8

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +++.+++..+..+|..+|.+.+|.++.+++..+++..+  ++.+++..+++.+|.+++|.|+|+||+..+...
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            45788999999999999999999999999999999875  688999999999999999999999999877544

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.65  E-value=5.5e-08  Score=76.53  Aligned_cols=83  Identities=22%  Similarity=0.426  Sum_probs=66.5

Q ss_pred             HHHHHccccCCCCcccHHHHHHHHHhhhccCCHH-HHHHHHHhhccCCCCcccHHHHHHHHHhCCCC--ChHHH----HH
Q 042392          354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKENNMG--DDATI----KE  426 (436)
Q Consensus       354 ~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~-~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~--~~~e~----~~  426 (436)
                      +.+.+.+..|+.|.++|+.|+.++.........+ ...-||+.||-|+|++|..++|...++.+...  +++|+    +.
T Consensus        74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ek  153 (189)
T KOG0038|consen   74 RRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEK  153 (189)
T ss_pred             HHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence            3455667889999999999999988766544322 36689999999999999999999999887433  77774    66


Q ss_pred             HHHhhccCCC
Q 042392          427 IISEVGRDHK  436 (436)
Q Consensus       427 ~~~~~d~~~d  436 (436)
                      +|.++|.|+|
T Consensus       154 vieEAD~DgD  163 (189)
T KOG0038|consen  154 VIEEADLDGD  163 (189)
T ss_pred             HHHHhcCCCC
Confidence            8889999987

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.61  E-value=6.2e-08  Score=72.61  Aligned_cols=75  Identities=23%  Similarity=0.301  Sum_probs=54.1

Q ss_pred             ccHHHHHHHHHH-hCCCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQY-FDKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~-~D~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....+..+|+. +|++|+| +|+..||...+..      .++..+        +....+.+++++++.+|.|+||.|+|
T Consensus         6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~------e~~~~~--------~~~~~~~~~~~ll~~~D~d~DG~I~f   71 (89)
T cd05023           6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNT------ELASFT--------KNQKDPGVLDRMMKKLDLNSDGQLDF   71 (89)
T ss_pred             HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHH------hhhHhh--------cCCCCHHHHHHHHHHcCCCCCCcCcH
Confidence            345678999999 7899987 9999998654211      111000        11223457999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        72 ~EF~~l~~~l~   82 (89)
T cd05023          72 QEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHH
Confidence            99999887654

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.60  E-value=8.2e-07  Score=77.49  Aligned_cols=144  Identities=19%  Similarity=0.176  Sum_probs=91.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHH-----HHHHHHHHHHhcC--CCCCeeecee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-----MIRREIQIRRLLS--GQPNIVELKS   94 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~--~h~niv~~~~   94 (436)
                      .+..+|.+.+++-......|.+..  -.|+.+.+|..+............     ...+.+..+..+.  +--..+.++-
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            355679999999988888887765  357889999876544322111111     1223333333331  1222222222


Q ss_pred             eee-----cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcE
Q 042392           95 AHE-----DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALL  169 (436)
Q Consensus        95 ~~~-----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~  169 (436)
                      +.+     -....+++|||++|..|.+...    +++    .+...+..++.-+|+.|++|+|..|.|+++   . ++.+
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv---~-~~~i  173 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLV---S-NNGI  173 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEE---E-CCcE
Confidence            221     2234568999999987765432    222    244567778999999999999999999998   3 4559


Q ss_pred             EEEecCCccc
Q 042392          170 KVTDFGSALL  179 (436)
Q Consensus       170 kl~DFG~a~~  179 (436)
                      +++||+..+.
T Consensus       174 ~iID~~~k~~  183 (229)
T PF06176_consen  174 RIIDTQGKRM  183 (229)
T ss_pred             EEEECccccc
Confidence            9999987764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=98.60  E-value=2.3e-07  Score=73.06  Aligned_cols=102  Identities=19%  Similarity=0.364  Sum_probs=73.7

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhhhc-cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC
Q 042392          264 QLMEAADMDGNGAIDYTEFTAATIQRQKLE-RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG  342 (436)
Q Consensus       264 ~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~-~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~  342 (436)
                      .+-+.+..||.|.++|+.|+.++.-..... ..-...-+|+.+|-|+|++|-..+|...+.++           .+-+++
T Consensus        75 ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l-----------Tr~eLs  143 (189)
T KOG0038|consen   75 RICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL-----------TRDELS  143 (189)
T ss_pred             HHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH-----------hhccCC
Confidence            455667789999999999999876553322 23357889999999999999988887654333           111121


Q ss_pred             CchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                         ...-+-.+++++.+.|.|+||+|+|.||-.++..
T Consensus       144 ---~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r  177 (189)
T KOG0038|consen  144 ---DEEVELICEKVIEEADLDGDGKLSFAEFEHVILR  177 (189)
T ss_pred             ---HHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence               1112224678888999999999999999987764

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.60  E-value=4.4e-07  Score=90.09  Aligned_cols=145  Identities=17%  Similarity=0.166  Sum_probs=92.7

Q ss_pred             eeecccCCeEEEEEEECCCCceEEEEEeecCCccchh------------------------------h------HHHHHH
Q 042392           31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA------------------------------E------NDMMIR   74 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------~------~~~~~~   74 (436)
                      ..|+.++-|.||+|+.+ +|+.||||+.+..-...-.                              +      .+-.+.
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            67999999999999974 5999999998654211100                              0      011134


Q ss_pred             HHHHHHHhcC----CCCCeeeceeeeecCCeEEEEEeccCCCChHHH--HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 042392           75 REIQIRRLLS----GQPNIVELKSAHEDETAVHVVMELCQGGDLFDR--IIAKGYYSERDAAPVLRAIVNAVNVCHSMGV  148 (436)
Q Consensus        75 ~E~~~l~~l~----~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~--l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  148 (436)
                      +|...+..++    +.|++.--.=+++-.+.-.++|||++|-.+.+.  +.+. ..+...+...+.++  .+.-+-..|+
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~-g~d~k~ia~~~~~~--f~~q~~~dgf  286 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA-GIDRKELAELLVRA--FLRQLLRDGF  286 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc-CCCHHHHHHHHHHH--HHHHHHhcCc
Confidence            4555444443    344433222233334556899999999888776  4443 34433333222222  1222334899


Q ss_pred             ccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          149 MHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       149 ~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      .|.|..|.||++   ..++.+.+.|||+...+.+
T Consensus       287 fHaDpHpGNi~v---~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         287 FHADPHPGNILV---RSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cccCCCccceEE---ecCCcEEEEcCcceecCCH
Confidence            999999999999   7789999999999887643

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.57  E-value=8.6e-08  Score=68.19  Aligned_cols=61  Identities=26%  Similarity=0.272  Sum_probs=47.1

Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +++|+.+|+|++|.|+..|+..++.              ..|+       +.+++.++++.+|.+++|.|+|+||+.++.
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~--------------~~g~-------~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~   60 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLG--------------KSGL-------PRSVLAQIWDLADTDKDGKLDKEEFAIAMH   60 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHH--------------HcCC-------CHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            5789999999999999888865522              2222       344688899999999999999999998776


Q ss_pred             hh
Q 042392          379 DI  380 (436)
Q Consensus       379 ~~  380 (436)
                      .+
T Consensus        61 ~~   62 (67)
T cd00052          61 LI   62 (67)
T ss_pred             HH
Confidence            44

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]

Probab=98.55  E-value=6.9e-07  Score=84.26  Aligned_cols=173  Identities=18%  Similarity=0.259  Sum_probs=114.1

Q ss_pred             hHHHHHHHh---hhhCCCCCCccCHHHHHHHHHh-cCC-CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          222 ETQALKEKF---IEMDTDKNGTLSYDELRAGLTK-VGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       222 ~~~~l~~~F---~~~D~~~~g~i~~~eL~~~l~~-~~~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      +..+++.+|   ...+.+.....+.+++....-. ++. .+.++-+..+-...|.-+||-|+|+||...-.-.  =....
T Consensus        31 ~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~l--C~pDa  108 (694)
T KOG0751|consen   31 DPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVL--CAPDA  108 (694)
T ss_pred             ChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhc--cCchH
Confidence            344455555   4557778888999988765443 443 3444444444445677899999999998753211  11244


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCC-chhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN-TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ....+|+.||+.++|.++.+++.......              .+.. ..-+.+.+-+...|   -.+..-.++|.||..
T Consensus       109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t--------------~l~~~~~f~~d~efI~~~F---g~~~~r~~ny~~f~Q  171 (694)
T KOG0751|consen  109 LFEVAFQLFDRLGNGEVSFEDVADIFGQT--------------NLHHHIPFNWDSEFIKLHF---GDIRKRHLNYAEFTQ  171 (694)
T ss_pred             HHHHHHHHhcccCCCceehHHHHHHHhcc--------------ccccCCCccCCcchHHHHh---hhHHHHhccHHHHHH
Confidence            67899999999999999999887652221              1100 00001111233333   233445699999999


Q ss_pred             HHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC
Q 042392          376 LMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN  417 (436)
Q Consensus       376 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~  417 (436)
                      ++.+..    .|.-+.+|+..|+.++|+||.=+++.++.+..
T Consensus       172 ~lh~~~----~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~  209 (694)
T KOG0751|consen  172 FLHEFQ----LEHAEQAFREKDKAKNGFISVLDFQDIMVTIR  209 (694)
T ss_pred             HHHHHH----HHHHHHHHHHhcccCCCeeeeechHhhhhhhh
Confidence            988765    34578999999999999999999999987653

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.55  E-value=4.2e-07  Score=68.01  Aligned_cols=67  Identities=24%  Similarity=0.366  Sum_probs=58.2

Q ss_pred             hHHHHHHHhhhhCC-CC-CCccCHHHHHHHHHh---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          222 ETQALKEKFIEMDT-DK-NGTLSYDELRAGLTK---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       222 ~~~~l~~~F~~~D~-~~-~g~i~~~eL~~~l~~---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+..+-.+|..++. ++ +|+|+.+||...+.+   +|.+++.++++.+++.+|.|++|+|+|+||+..+..
T Consensus         8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029           8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            45567788999987 55 899999999999973   688899999999999999999999999999877643

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	436
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-29
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-28
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		9e-12
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-27
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-27
2aao_A	166	Regulatory Apparatus Of Calcium Dependent Protein K		6e-27
2aao_A	166	Regulatory Apparatus Of Calcium Dependent Protein K		5e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-26
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-25
1s6i_A	188	Ca2+-Regulatory Region (Cld) From Soybean Calcium-D		8e-25
1s6i_A	188	Ca2+-Regulatory Region (Cld) From Soybean Calcium-D		1e-07
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-24
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-24
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-24
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-24
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-24
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		7e-24
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		9e-24
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-23
3soa_A	444	Full-Length Human Camkii Length = 444		7e-23
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-22
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-11
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		5e-05
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-22
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-11
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		5e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-22
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-11
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-22
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-22
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-22
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-22
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-22
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-22
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-22
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		5e-22
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-10
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		6e-22
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-12
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		1e-21
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-21
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-21
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-21
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-21
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		5e-21
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-21
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-21
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		6e-21
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-21
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		7e-21
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-21
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-21
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		7e-21
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		7e-21
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		9e-21
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		9e-21
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-20
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-20
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-20
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		2e-20
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-20
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		4e-20
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-19
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-19
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-19
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-19
3o4y_A	196	Crystal Structure Of Cad Domain Of The Plasmodium V		9e-19
3pm8_A	197	Cad Domain Of Pff0520w, Calcium Dependent Protein K		2e-18
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		5e-18
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		5e-18
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		5e-18
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-18
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-18
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		7e-18
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		7e-18
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		7e-18
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		7e-18
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		8e-18
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		8e-18
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		8e-18
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		9e-18
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-17
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-17
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-17
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-17
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-17
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-17
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-17
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-17
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-17
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-17
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-17
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-17
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-17
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-17
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-17
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-17
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-17
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-17
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-17
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-17
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-17
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-17
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-17
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-17
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-17
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-17
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-17
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-17
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-17
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-17
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		4e-17
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-17
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		4e-17
2oza_A	356	Structure Of P38alpha Complex Length = 356		4e-17
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		4e-17
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		4e-17
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-17
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		5e-17
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		5e-17
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-17
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-17
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-17
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		8e-17
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		9e-17
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-16
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-16
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-16
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-16
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		3e-16
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-16
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-16
3k21_A	191	Crystal Structure Of Carboxy-Terminus Of Pfc0420w L		4e-16
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-16
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-16
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-16
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-16
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		5e-16
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		8e-16
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-16
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-15
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-15
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-15
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-15
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-15
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-15
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-15
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-15
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-15
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-15
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		3e-15
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-15
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-15
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-15
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-15
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-15
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-15
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-15
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-15
1s6j_A	87	N-Terminal Region Of The Ca2+-Saturated Calcium Reg		5e-15
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		5e-15
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		6e-15
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-15
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-15
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-15
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		8e-15
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		8e-15
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		9e-15
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		9e-15
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-14
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-14
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-14
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-14
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-14
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-14
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-14
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-14
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-14
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-14
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-14
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-14
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-14
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-14
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-14
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-14
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-14
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-14
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-14
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-14
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-14
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-14
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-14
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-14
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		8e-14
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-14
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-13
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-13
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-13
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-13
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-13
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-13
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-13
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-13
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-13
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-13
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-13
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-13
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-13
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-13
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		3e-13
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		2e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-13
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-13
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-13
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-13
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-13
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-13
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-13
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-13
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-13
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-13
2f2o_A	179	Structure Of Calmodulin Bound To A Calcineurin Pept		4e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-13
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		4e-13
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		3e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-13
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-13
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		5e-13
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		7e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-13
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		5e-13
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		5e-04
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		5e-13
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		3e-04
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		5e-13
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		8e-04
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-13
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		7e-04
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		6e-13
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		5e-04
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		6e-13
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		8e-04
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		6e-13
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		8e-04
1up5_B	148	Chicken Calmodulin Length = 148		6e-13
1up5_B	148	Chicken Calmodulin Length = 148		8e-04
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		6e-13
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		8e-04
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		6e-13
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		3e-04
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		6e-13
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		4e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		6e-13
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-13
2ygg_B	150	Complex Of Cambr And Cam Length = 150		6e-13
2ygg_B	150	Complex Of Cambr And Cam Length = 150		7e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		6e-13
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		6e-13
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		3e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		6e-13
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		6e-13
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		7e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		7e-13
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-13
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-13
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-13
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-13
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-13
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-13
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-13
2bkh_B	149	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		8e-13
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		8e-13
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		2e-04
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		8e-13
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		8e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-13
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-13
1ooj_A	149	Structural Genomics Of Caenorhabditis Elegans : Cal		8e-13
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		8e-13
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-13
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		8e-13
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		8e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-13
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		8e-13
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		8e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-13
2ix7_A	145	Structure Of Apo-Calmodulin Bound To Unconventional		8e-13
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		9e-13
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		9e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		9e-13
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-13
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		9e-13
4gow_D	144	Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX		9e-13
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		9e-13
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		9e-13
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		3e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		9e-13
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		9e-13
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		9e-13
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		1e-12
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		9e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-12
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-12
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-12
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-12
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		1e-12
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		3e-04
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		1e-12
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		7e-04
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		1e-12
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		3e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-12
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-12
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		1e-12
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		7e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-12
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-12
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-12
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-12
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-12
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-12
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-12
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-12
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-12
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-12
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-12
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		1e-12
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		2e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-12
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-12
3sg4_A	448	Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len		2e-12
3sg3_A	449	Crystal Structure Of Gcamp3-D380y Length = 449		2e-12
1exr_A	148	The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca		2e-12
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-12
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-12
3sg5_A	448	Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke		2e-12
3u0k_A	440	Crystal Structure Of The Genetically Encoded Calciu		2e-12
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-12
3sg7_A	448	Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4		2e-12
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-12
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-12
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-12
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-12
3l19_A	214	Crystal Structure Of Calcium Binding Domain Of Cpcd		3e-12
3l19_A	214	Crystal Structure Of Calcium Binding Domain Of Cpcd		5e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-12
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-12
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		3e-12
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		7e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		3e-12
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-12
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		3e-12
2k0j_A	148	Solution Structure Of Cam Complexed To Drp1p Length		3e-12
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		3e-12
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-12
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-12
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		3e-12
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-12
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		3e-12
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		4e-12
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		4e-12
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-12
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		4e-12
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-12
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		4e-12
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		4e-12
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		4e-12
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		4e-12
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		1e-05
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		5e-12
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		2e-05
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		5e-12
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		1e-05
1clm_A	148	Structure Of Paramecium Tetraurelia Calmodulin At 1		5e-12
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-11
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		2e-11
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		2e-05
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-11
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		2e-11
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		2e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-11
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-11
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-10
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		2e-10
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		2e-10
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		2e-04
1xfx_O	149	Crystal Structure Of Anthrax Edema Factor (Ef) In C		2e-10
1niw_A	148	Crystal Structure Of Endothelial Nitric Oxide Synth		2e-10
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-10
3mse_B	180	Crystal Structure Of C-Terminal Domain Of Pf110239		2e-10
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-10
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-10
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-10
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-10
1ggz_A	148	Crystal Structure Of The Calmodulin-Like Protein (H		5e-10
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-10
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-10
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		6e-10
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-10
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-10
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-10
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-10
2l1w_A	149	The Solution Structure Of Soybean Calmodulin Isofor		7e-10
2l1w_A	149	The Solution Structure Of Soybean Calmodulin Isofor		5e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-10
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		7e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-09
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-09
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-09
3khe_A	191	Crystal Structure Of The Calcium-Loaded Calmodulin-		1e-09
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-09
1y6w_A	148	Trapped Intermediate Of Calmodulin Length = 148		2e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-09
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-09
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-09
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-09
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		5e-09
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		7e-09
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		8e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		8e-09
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		9e-09
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		9e-09
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		9e-09
3kf9_A	149	Crystal Structure Of The SdcenSKMLCK COMPLEX Length		1e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-08
3ekj_A	449	Calcium-Free Gcamp2 (Calcium Binding Deficient Muta		1e-08
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-08
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		1e-08
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		1e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-08
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-08
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-08
2lhi_A	176	Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L		2e-08
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-08
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-08
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-08
1lkj_A	146	Nmr Structure Of Apo Calmodulin From Yeast Saccharo		3e-08
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-08
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		5e-08
2lhh_A	128	Solution Structure Of Ca2+-Bound Ycam Length = 128		8e-08
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		8e-08
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-07
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-07
2lmt_A	148	Nmr Structure Of Androcam Length = 148		1e-07
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-07
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-07
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-07
1a2x_A	159	Complex Of Troponin C With A 47 Residue (1-47) Frag		1e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-07
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		1e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-07
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		1e-07
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-07
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-07
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		2e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-07
2kn2_A	92	Solution Structure Of The C-Terminal Domain Of Soyb		2e-07
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-07
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-07
1tcf_A	159	Crystal Structure Of Calcium-Saturated Rabbit Skele		3e-07
2rob_A	70	Solution Structure Of Calcium Bound Soybean Calmodu		3e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-07
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-07
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-07
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-07
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-07
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-07
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-07
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-07
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		5e-07
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		5e-07
1tco_B	169	Ternary Complex Of A Calcineurin A Fragment, Calcin		5e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-07
1mf8_B	170	Crystal Structure Of Human Calcineurin Complexed Wi		6e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-07
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		6e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-07
2ro9_A	69	Solution Structure Of Calcium Bound Soybean Calmodu		6e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-07
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-07
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		9e-07
2lan_A	167	Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc		9e-07
3ox6_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		9e-07
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-06
2p6b_B	156	Crystal Structure Of Human Calcineurin In Complex W		1e-06
3fwb_A	161	Sac3:sus1:cdc31 Complex Length = 161		1e-06
3ox5_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		1e-06
3ll8_B	155	Crystal Structure Of Calcineurin In Complex With Ak		1e-06
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-06
2obh_A	143	Centrin-Xpc Peptide Length = 143		2e-06
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-06
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-06
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-06
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		5e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		5e-06
2kxw_A	73	Structure Of The C-Domain Fragment Of Apo Calmoduli		6e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		6e-06
2lv7_A	100	Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D		6e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-06
1f71_A	67	Refined Solution Structure Of Calmodulin C-Terminal		6e-06
2col_B	67	Crystal Structure Analysis Of CyaaC-Cam With Pyroph		7e-06
1zot_B	69	Crystal Structure Analysis Of The CyaaC-Cam With Pm		8e-06
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		8e-06
1yru_B	74	Crystal Structure Analysis Of The Adenylyl Cyclaes		9e-06
1cmf_A	73	Nmr Solution Structure Of Apo Calmodulin Carboxy-Te		9e-06
1fw4_A	71	Crystal Structure Of E. Coli Fragment Tr2c From Cal		9e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		9e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-05
2bl0_B	145	Physarum Polycephalum Myosin Ii Regulatory Domain L		1e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-05
2kz2_A	94	Calmodulin, C-Terminal Domain, F92e Mutant Length =		1e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-05
2gv5_A	161	Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1		1e-05
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		2e-05
1ytz_C	162	Crystal Structure Of Skeletal Muscle Troponin In Th		2e-05
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		2e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-05
2w49_0	159	Isometrically Contracting Insect Asynchronous Fligh		2e-05
4tnc_A	162	Refined Structure Of Chicken Skeletal Muscle Tropon		2e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-05
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-05
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-05
1f54_A	77	Solution Structure Of The Apo N-Terminal Domain Of		3e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-05
3e3r_A	204	Crystal Structure And Biochemical Characterization		3e-05
5tnc_A	162	Refined Crystal Structure Of Troponin C From Turkey		3e-05
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		3e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-05
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		3e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-05
3tz1_A	74	Crystal Structure Of The Ca2+-saturated C-terminal		3e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-05
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-05
1tnw_A	162	Nmr Solution Structure Of Calcium Saturated Skeleta		4e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		4e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		5e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		6e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-05
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		7e-05
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		7e-05
1dtl_A	161	Crystal Structure Of Calcium-Saturated (3ca2+) Card		7e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		7e-05
2rrt_A	72	Solution Structure Of Magnesium-Bound Form Of Calmo		7e-05
2jt0_A	161	Solution Structure Of F104w Cardiac Troponin C Leng		7e-05
2jt3_A	161	Solution Structure Of F153w Cardiac Troponin C Leng		7e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-05
1aj4_A	161	Structure Of Calcium-Saturated Cardiac Troponin C,		7e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		8e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		9e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		9e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		9e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		9e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		9e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		9e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		9e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		9e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		9e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		9e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		9e-05
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-04
2bl0_C	142	Physarum Polycephalum Myosin Ii Regulatory Domain L		1e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-04
1la0_A	161	Solution Structure Of Calcium Saturated Cardiac Tro		1e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-04
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-04
2jnf_A	158	Solution Structure Of Fly Troponin C, Isoform F1 Le		1e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-04
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		1e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
3ifk_A	90	Crystal Structure Of Calcium-Saturated Calmodulin N		2e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
2jnx_A	134	Nmr Derived Solution Structure Of An Ef-Hand Calciu		2e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-04
2ami_A	96	Solution Structure Of The Calcium-Loaded N-Terminal		2e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
2joj_A	77	Nmr Solution Structure Of N-Terminal Domain Of Eupl		2e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-04
1a75_B	109	Whiting Parvalbumin Length = 109		2e-04
1a75_A	108	Whiting Parvalbumin Length = 108		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-04
2jtz_A	161	Solution Structure And Chemical Shift Assignments O		3e-04
2jt8_A	161	Solution Structure Of The F153-To-5-Flurotryptophan		3e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2lqc_A	77	Nmr Solution Structure Of A Ca2+-Calmodulin With A		3e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-04
1f70_A	76	Refined Solution Structure Of Calmodulin N-Terminal		3e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-04
3b32_A	75	Crystal Structure Of Calcium-Saturated Calmodulin N		3e-04
1ak8_A	76	Nmr Solution Structure Of Cerium-Loaded Calmodulin		3e-04
3uct_A	79	Structure Of Mn2+-Bound N-Terminal Domain Of Calmod		3e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-04
2llo_A	80	Solution Nmr-Derived Structure Of Calmodulin N-Lobe		3e-04
1j7o_A	76	Solution Structure Of Calcium-calmodulin N-terminal		4e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		4e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		4e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-04
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-04
2k7c_A	72	Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length =		5e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		5e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		5e-04
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		5e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		5e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		5e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		6e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		6e-04
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		6e-04
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		6e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		6e-04
2ro8_A	79	Solution Structure Of Calcium Bound Soybean Calmodu		6e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		7e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		7e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		7e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		7e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		7e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		7e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		7e-04
2kdh_A	72	The Solution Structure Of Human Cardiac Troponin C		8e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		8e-04
2i08_A	78	Solvation Effect In Conformational Changes Of Ef-Ha		9e-04

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LGRG   + Y C +  T  PYA K + K    K      ++R EI +   LS  PNI++L
Sbjct: 61  LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK------IVRTEIGVLLRLS-HPNIIKL 113
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
           K   E  T + +V+EL  GG+LFDRI+ KGYYSERDAA  ++ I+ AV   H  G++HRD
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 153 LKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           LKPEN  + +   +A LK+ DFG + + E +
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 58/447 (12%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + LG G +G   LC +  T++  A K + +K  +  + N  ++  E+ + +LL   
Sbjct: 39  YQRVKKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTSSNSKLLE-EVAVLKLLD-H 95
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++VME  +GG+LFD II +  ++E DAA +++ +++ V   H  
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH 155
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE------EEGGEASDDTSVILRMKQF 200
            ++HRDLKPEN    S++ +AL+K+ DFG + +FE      E  G A      +LR K  
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 201 RR--MSKLKKLTVKVIVEYLP--GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM 256
            +  +  +  +   ++  Y P  G+  Q +  K +E       +  +  +  G   +   
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRK-VEKGKYTFDSPEWKNVSEGAKDLIKQ 274
Query: 257 LTEFDVKQLMEAADM-----------DGNGAIDYTEFTAATIQRQKLERSEYLSKA---- 301
           + +FD ++ + A                   I+      A    +K + S+ L++A    
Sbjct: 275 MLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLY 334
Query: 302 -----------------FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
                            F++ DK+  G       ++  + I   S +  ++   F L   
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDG------QLDRQELIDGYSKLSGEEVAVFDLPQI 388
Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI 404
           +     + +  ++   D D NG ID+ EFV +  D   L + + LE AFQ  D++ +  I
Sbjct: 389 E-----SEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKI 443
Query: 405 TVNELETAFKENNMGDDATIKEIISEV 431
           +V+EL + F  +++ +  T KE+IS +
Sbjct: 444 SVDELASVFGLDHL-ESKTWKEMISGI 469

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 181 EEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNG 239
           +E G E     + I  M++F+   KL +  +  +   L   EET+ L + F  +D + +G
Sbjct: 302 KESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDG 361
Query: 240 TLSYDELRAGLTKV-GSMLTEFDVKQL-------MEAADMDGNGAIDYTEFTAATIQRQK 291
            L   EL  G +K+ G  +  FD+ Q+       + AAD D NG IDY+EF    + R+ 
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
Query: 292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
           L   + L  AFQ FD+D +G    +  V+   ++  + H+ +                  
Sbjct: 422 LLSKDKLESAFQKFDQDGNG----KISVDELASVFGLDHLES-----------------K 460
Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLM 377
             K+++   D + +G++DF EF  ++
Sbjct: 461 TWKEMISGIDSNNDGDVDFEEFCKMI 486

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           D+  +Y+    +GRG +G   +  +  T +  A K + K     + E+    ++EI+I +
Sbjct: 23  DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY----FVEDVDRFKQEIEIMK 78
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            L   PNI+ L    ED T +++VMELC GG+LF+R++ K  + E DAA +++ +++AV 
Sbjct: 79  SLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            CH + V HRDLKPENF F++   ++ LK+ DFG A  F+
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           D+  +Y+    +GRG +G   +  +  T +  A K + K     + E+    ++EI+I +
Sbjct: 6   DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY----FVEDVDRFKQEIEIMK 61
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            L   PNI+ L    ED T +++VMELC GG+LF+R++ K  + E DAA +++ +++AV 
Sbjct: 62  SLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            CH + V HRDLKPENF F++   ++ LK+ DFG A  F+
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160

>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 21/177 (11%)
Query: 198 KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML 257
           KQF   +K KK  ++VI E L  EE   LKE F  +D DK+G ++++EL+AGL +VG+ L
Sbjct: 1   KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRA 317
            E ++  L +AAD+D +G IDY EF AAT+   K+ER ++L  AF YFDKD SGY     
Sbjct: 61  KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGY----- 115
Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
              +P  ++          ++FG+ + +       +++L    D D +G ID+ EFV
Sbjct: 116 --ITPDELQQA-------CEEFGVEDVR-------IEELXRDVDQDNDGRIDYNEFV 156

>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
           L    D+D +G ID+ EF+     + K+E  + L  AF Y DK+   +IT +EL+ A +E
Sbjct: 68  LXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEE 127
Query: 416 NNMGDDATIKEIISEVGRDH 435
             + +D  I+E+  +V +D+
Sbjct: 128 FGV-EDVRIEELXRDVDQDN 146

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 96/161 (59%), Gaps = 10/161 (6%)
Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
           K  ED+   + F   LG G F    L  E +T   +A K + KK    K    EN++ + 
Sbjct: 15  KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           R+I+         NIV L+  +E    +++VM+L  GG+LFDRI+ KG+Y+E+DA+ ++R
Sbjct: 75  RKIK-------HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++AV   H MG++HRDLKPEN  + S+D+ + + ++DFG
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFG 168

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           + LG G F +   C    +N  +A K ++K+ +          ++EI   +L  G PNIV
Sbjct: 17  KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN-------TQKEITALKLCEGHPNIV 69
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           +L     D+    +VMEL  GG+LF+RI  K ++SE +A+ ++R +V+AV+  H +GV+H
Sbjct: 70  KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALL 179
           RDLKPEN  F   +DN  +K+ DFG A L
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARL 158

>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 93/163 (57%), Gaps = 21/163 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+D +
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
           G IDY EF AAT+   KLER E L  AF YFDKD SGY     + ++             
Sbjct: 61  GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA------------- 107
Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
             K FGL +       +M+K++    D D +G ID+ EF  +M
Sbjct: 108 -CKDFGLDD---IHIDDMIKEI----DQDNDGQIDYGEFAAMM 142

>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           +K L+   DID +G ID+ EF+     + KLE  E L  AF Y DK+   +IT++E++ A
Sbjct: 48  IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 413 FKENNMGDDATIKEIISEVGRDH 435
            K+  + DD  I ++I E+ +D+
Sbjct: 108 CKDFGL-DDIHIDDMIKEIDQDN 129

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
           K  ED+   Y F  +LG G F    L  +  T    A K +AKK    K    EN++ + 
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
            +I+        PNIV L   +E    ++++M+L  GG+LFDRI+ KG+Y+ERDA+ ++ 
Sbjct: 71  HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++AV   H +G++HRDLKPEN  + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 32/286 (11%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + F  +LG G F   +L  +  T   +A K + K P  +    D  +  EI + + +  +
Sbjct: 11  FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR----DSSLENEIAVLKKIKHE 66
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            NIV L+  +E  T  ++VM+L  GG+LFDRI+ +G Y+E+DA+ V++ +++AV   H  
Sbjct: 67  -NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEASDDTSVILRMKQF 200
           G++HRDLKPEN  +++ ++N+ + +TDFG + + E+ G      G        +L  K +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 201 RRM---SKLKKLTVKVIVEYLP-GEETQA-----LKEKFIEMDTDKNGTLSYDELRAGLT 251
            +      +  +T  ++  Y P  EET++     +KE + E ++       +D++     
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP-----FWDDISESAK 239
Query: 252 KVGSMLTE------FDVKQLMEAADMDGNGAIDYTEFTAATIQRQK 291
                L E      +  ++ +    +DGN A+    + + ++Q QK
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQK 285

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
           K  ED+   Y F  +LG G F    L  +  T    A K +AK+    K    EN++ + 
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
            +I+        PNIV L   +E    ++++M+L  GG+LFDRI+ KG+Y+ERDA+ ++ 
Sbjct: 71  HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++AV   H +G++HRDLKPEN  + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
           K  ED+   Y F  +LG G F    L  +  T    A K +AK+    K    EN++ + 
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
            +I+        PNIV L   +E    ++++M+L  GG+LFDRI+ KG+Y+ERDA+ ++ 
Sbjct: 71  HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++AV   H +G++HRDLKPEN  + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
           K  ED+   Y F  +LG G F    L  +  T    A K +AK+    K    EN++ + 
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
            +I+        PNIV L   +E    ++++M+L  GG+LFDRI+ KG+Y+ERDA+ ++ 
Sbjct: 71  HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++AV   H +G++HRDLKPEN  + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG+G F V   C +  T   YA K +  K K+  A +   + RE +I RLL   
Sbjct: 6   YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 62
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  +  +E   ++V +L  GG+LF+ I+A+ YYSE DA+  ++ I+ +VN CH  
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           G++HRDLKPEN    S+   A +K+ DFG A+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG+G F V   C +  T   YA K +  K K+  A +   + RE +I RLL   
Sbjct: 6   YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 62
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  +  +E   ++V +L  GG+LF+ I+A+ YYSE DA+  ++ I+ +VN CH  
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           G++HRDLKPEN    S+   A +K+ DFG A+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG+G F V   C +      YA K +  K K+  A +   + RE +I RLL   
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  +  +E   +++ +L  GG+LF+ I+A+ YYSE DA+  ++ I+ AV  CH M
Sbjct: 81  PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           GV+HRDLKPEN    S+   A +K+ DFG A+  E E
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG+G F V   C +      YA  +M    K   A +   + RE +I RLL   
Sbjct: 13  YQLFEELGKGAFSVVRRCVKVLAGQEYA--AMIINTKKLSARDHQKLEREARICRLLK-H 69
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  +  +E   +++ +L  GG+LF+ I+A+ YYSE DA+  ++ I+ AV  CH M
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           GV+HR+LKPEN    S+   A +K+ DFG A+  E E
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R+LG+G FG   LC +  T    A K ++K+   +  + + ++R E+Q+ + L   
Sbjct: 51  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLD-H 108
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++V E+  GG+LFD II++  +SE DAA ++R +++ +   H  
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
           + IL ++QF+   KL +  +  +   L  + ET+ L   F +MD + +G L   EL  G 
Sbjct: 325 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 384
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
            ++        SML     E +V Q+++A D D NG I+Y+EF    + R+ L   E L 
Sbjct: 385 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 444
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF+ FD DNSG                +S   T+ A  FG+ +          K ++ +
Sbjct: 445 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 483
Query: 360 GDIDGNGNIDFIEFVNLM 377
            D + +G +DF EF  ++
Sbjct: 484 VDKNNDGEVDFDEFQQML 501

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           D D NG I++ EFV +  D   L + E LE+AF+  D ++   I+  EL T F  +++ D
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 473
Query: 421 DATIKEIISEVGRDH 435
             T K ++SEV +++
Sbjct: 474 SETWKSVLSEVDKNN 488

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R+LG+G FG   LC +  T    A K ++K+ ++K   +   + RE+Q+ + L   
Sbjct: 52  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 109
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++V E+  GG+LFD II++  +SE DAA ++R +++ +   H  
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
           + IL ++QF+   KL +  +  +   L  + ET+ L   F +MD + +G L   EL  G 
Sbjct: 326 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 385
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
            ++        SML     E +V Q+++A D D NG I+Y+EF    + R+ L   E L 
Sbjct: 386 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 445
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF+ FD DNSG                +S   T+ A  FG+ +          K ++ +
Sbjct: 446 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 484
Query: 360 GDIDGNGNIDFIEFVNLM 377
            D + +G +DF EF  ++
Sbjct: 485 VDKNNDGEVDFDEFQQML 502

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           D D NG I++ EFV +  D   L + E LE+AF+  D ++   I+  EL T F  +++ D
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 474
Query: 421 DATIKEIISEVGRDH 435
             T K ++SEV +++
Sbjct: 475 SETWKSVLSEVDKNN 489

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R+LG+G FG   LC +  T    A K ++K+   +  + + ++R E+Q+ + L   
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLD-H 85
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++V E+  GG+LFD II++  +SE DAA ++R +++ +   H  
Sbjct: 86  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
           + IL ++QF+   KL +  +  +   L  + ET+ L   F +MD + +G L   EL  G 
Sbjct: 302 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 361
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
            ++        SML     E +V Q+++A D D NG I+Y+EF    + R+ L   E L 
Sbjct: 362 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 421
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF+ FD DNSG                +S   T+ A  FG+ +          K ++ +
Sbjct: 422 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 460
Query: 360 GDIDGNGNIDFIEFVNLM 377
            D + +G +DF EF  ++
Sbjct: 461 VDKNNDGEVDFDEFQQML 478

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           D D NG I++ EFV +  D   L + E LE+AF+  D ++   I+  EL T F  +++ D
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 450
Query: 421 DATIKEIISEVGRDH 435
             T K ++SEV +++
Sbjct: 451 SETWKSVLSEVDKNN 465

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
           +Y     LG+G F V   C   +T + +A K +  K   K +  D   + RE +I R L 
Sbjct: 30  NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ 86
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YSE DA+  ++ I+ ++  CH
Sbjct: 87  -HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           S G++HR+LKPEN    S+   A +K+ DFG A+
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R+LG+G FG   LC +  T    A K ++K+ ++K   +   + RE+Q+ + L   
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 85
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI +L    ED+   ++V E+  GG+LFD II++  +SE DAA ++R +++ +   H  
Sbjct: 86  PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 33/194 (17%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
           + IL ++QF+   KL +  +      L  + ET+ L   F + D + +G L   EL  G 
Sbjct: 302 NAILNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGY 361
Query: 251 -----------TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
                      + + +   E +V Q+++A D D NG I+Y+EF      R+ L   E L 
Sbjct: 362 KELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLE 421
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF+ FD DNSG                +S   T+ A  FG+ +          K ++ +
Sbjct: 422 RAFRXFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 460
Query: 360 GDIDGNGNIDFIEF 373
            D + +G +DF EF
Sbjct: 461 VDKNNDGEVDFDEF 474

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           D D NG I++ EFV +  D   L + E LE+AF+  D ++   I+  EL T F  +++ D
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDV-D 450
Query: 421 DATIKEIISEVGRDH 435
             T K ++SEV +++
Sbjct: 451 SETWKSVLSEVDKNN 465

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
           Y     LG+G F V   C   +T + +A K +  K   K +  D   + RE +I R L  
Sbjct: 8   YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 63
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YSE DA+  ++ I+ ++  CHS
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            G++HR+LKPEN    S+   A +K+ DFG A+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G F V   C +  T   YA K +  K K+  A +   + RE +I RLL    NIV L
Sbjct: 12  IGKGAFSVVRRCVKLCTGHEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-HSNIVRL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             +  +E   ++V +L  GG+LF+ I+A+ YYSE DA+  ++ I+ AV  CH MGV+HRD
Sbjct: 69  HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRD 128
Query: 153 LKPENFCFISRDDNALLKVTDFGSAL 178
           LKPEN    S+   A +K+ DFG A+
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLAI 154

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R+LG+G FG   LC +  T    A K ++K+ ++K   +   + RE+Q+ + L   
Sbjct: 34  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++V E+  GG+LFD II++  +SE DAA ++R +++ +   H  
Sbjct: 92  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
            ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
           Y     LG+G F V   C   +T + +A K +  K   K +  D   + RE +I R L  
Sbjct: 7   YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 62
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YSE DA+  ++ I+ ++  CHS
Sbjct: 63  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            G++HR+LKPEN    S+   A +K+ DFG A+
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
           Y     LG+G F V   C   +T + +A K +  K   K +  D   + RE +I R L  
Sbjct: 8   YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 63
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YSE DA+  ++ I+ ++  CHS
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            G++HR+LKPEN    S+   A +K+ DFG A+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 194/466 (41%), Gaps = 84/466 (18%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + LG G +G   LC +  T    A K + KK  +    N   +  E+ + + L   
Sbjct: 6   YQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD-H 63
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++VME+ +GG+LFD II +  +SE DAA +++ +++     H  
Sbjct: 64  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDF----------------GSALLFEEE------- 183
            ++HRDLKPEN    S+  +AL+K+ DF                G+A     E       
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD 183
Query: 184 ----------------------GGEASDDTSVILRMKQ---------FRRMSKLKKLTVK 212
                                 GG+   D  ++ R+++         + ++S   K  VK
Sbjct: 184 EKCDVWSCGVILYILLCGYPPFGGQT--DQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 213 VIVEYLPGEET---QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA 269
           +++ Y P +     +AL   +I     +  T   D  +  LT     + +F   Q +  A
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIVKFCSQKHT---DVGKHALTGALGNMKKFQSSQKLAQA 298
Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVS 329
            M   G+           +   LE ++ L++ F+  D +  G  + + ++E     R + 
Sbjct: 299 AMLFMGS-----------KLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG---YRKLM 344
Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
               D        ++ Q  A   +  ++   D D NG I++ EFV +  D   L + E L
Sbjct: 345 QWKGDTVSDL---DSSQIEAE--VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 399
Query: 390 EKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
             AFQ  D +    IT  EL   F    + DD T  +++ E  +++
Sbjct: 400 LAAFQQFDSDGSGKITNEELGRLFGVTEV-DDETWHQVLQECDKNN 444

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 191 TSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG 249
           T  +  MK+F+   KL +  +  +   L   EET+ L + F ++D + +G L   EL  G
Sbjct: 280 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 339
Query: 250 LTKV----GSMLTEFD-------VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL 298
             K+    G  +++ D       V  ++++ D D NG I+Y+EF    + +Q L   E L
Sbjct: 340 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 399
Query: 299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVL 358
             AFQ FD D SG             I N      +  + FG+          +L+    
Sbjct: 400 LAAFQQFDSDGSG------------KITN-----EELGRLFGVTEVDDETWHQVLQ---- 438
Query: 359 QGDIDGNGNIDFIEFVNLMTDI 380
           + D + +G +DF EFV +M  I
Sbjct: 439 ECDKNNDGEVDFEEFVEMMQKI 460

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y+   MLG+G FG    C +  T   YA K + K       ++   I RE+++ + L   
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED ++ ++V EL  GG+LFD II +  +SE DAA +++ + + +   H  
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            ++HRDLKPEN    S++ +  +K+ DFG +  F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 44/213 (20%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG- 249
           S +  ++QF+   KL +  +  +   L   +ET+ L E F ++DT+ +G L  DEL  G 
Sbjct: 298 SAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGY 357
Query: 250 --------------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS 295
                         +   GS + E  +  LM   DMDG+G+I+Y+EF A+ I R  L   
Sbjct: 358 HEFMRLKGVDSNSLIQNEGSTI-EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR 416
Query: 296 EYLSKAFQYFDKDNSGY----DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
           E + +AF+ FDKD SG     + F+   ++  +I+                       M 
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ-----------------------ME 453
Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLE 384
            L+ ++ Q D + +G +DF EFV ++ +  + E
Sbjct: 454 ELESIIEQVDNNKDGEVDFNEFVEMLQNFVRNE 486

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG+G F V   C + +    YA K +  K K+  A +   + RE +I RLL   
Sbjct: 33  YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 89
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV L  +  +E   ++V +L  GG+LF+ I+A+ YYSE DA+  +  I+ +VN  H  
Sbjct: 90  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            ++HRDLKPEN    S+   A +K+ DFG A+
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y+   MLG+G FG    C +  T   YA K + K       ++   I RE+++ + L   
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED ++ ++V EL  GG+LFD II +  +SE DAA +++ + + +   H  
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            ++HRDLKPEN    S++ +  +K+ DFG +  F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y+   MLG+G FG    C +  T   YA K + K       ++   I RE+++ + L   
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED ++ ++V EL  GG+LFD II +  +SE DAA +++ + + +   H  
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            ++HRDLKPEN    S++ +  +K+ DFG +  F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G + V   C   +TNM +A K + K  +    E ++++R            PNI+ L
Sbjct: 30  IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLR--------YGQHPNIITL 81
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
           K  ++D   V+VV EL +GG+L D+I+ + ++SER+A+ VL  I   V   H+ GV+HRD
Sbjct: 82  KDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 153 LKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
           LKP N  ++    N   +++ DFG A     E G
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     +G G +     C   +TNM YA K + K  +    E ++++R          GQ
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY---------GQ 79
Query: 87  -PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNI+ LK  ++D   V++V EL +GG+L D+I+ + ++SER+A+ VL  I   V   HS
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 146 MGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
            GV+HRDLKP N  ++    N   L++ DFG A     E G
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     +G G +     C   +TNM YA K + K  +    E ++++R            
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR--------YGQH 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ LK  ++D   V++V EL +GG+L D+I+ + ++SER+A+ VL  I   V   HS 
Sbjct: 81  PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 147 GVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
           GV+HRDLKP N  ++    N   L++ DFG A     E G
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + LG G +G   LC +  T    A K + KK  +    N   +  E+ + + L   
Sbjct: 23  YQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD-H 80
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI++L    ED+   ++VME+ +GG+LFD II +  +SE DAA +++ +++     H  
Sbjct: 81  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            ++HRDLKPEN    S+  +AL+K+ DFG +  FE  G
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 64
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 65  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 64
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 65  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K + KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G + V   C   +TN  +A K + K  +    E ++++R            PNI+ L
Sbjct: 30  IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLR--------YGQHPNIITL 81
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
           K  ++D   V+VV EL +GG+L D+I+ + ++SER+A+ VL  I   V   H+ GV+HRD
Sbjct: 82  KDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 153 LKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
           LKP N  ++    N   +++ DFG A     E G
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K   KK + K +   +    I RE+
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V ++ EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 66  SILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQ 78
           EDV  HY  G  LG G+F +   C +  T   YA K + K+     +   +   I RE+ 
Sbjct: 8   EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I R +   PNI+ L    E++T V +++EL  GG+LFD +  K   +E +A   L+ I++
Sbjct: 68  ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
            V+  HS  + H DLKPEN   + ++  N  +K+ DFG A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + F R LG G FG  +L  E S+ +    K++ K       E    I  EI++ + L   
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ---IEAEIEVLKSLD-H 79
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRII---AKG-YYSERDAAPVLRAIVNAVNV 142
           PNI+++    ED   +++VME C+GG+L +RI+   A+G   SE   A +++ ++NA+  
Sbjct: 80  PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE-EEGGEASDDTSVILRMKQFR 201
            HS  V+H+DLKPEN  F     ++ +K+ DFG A LF+ +E    +  T++ +  + F+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK 199
Query: 202 R 202
           R
Sbjct: 200 R 200

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
           HY  G  LG G+F +   C +  T   YA K + K+     +   +   I RE+ I R +
Sbjct: 6   HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              PNI+ L    E++T V +++EL  GG+LFD +  K   +E +A   L+ I++ V+  
Sbjct: 66  R-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 144 HSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           HS  + H DLKPEN   + ++  N  +K+ DFG A
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREIQIRRL 82
           HY  G  LG G+F +   C +  T   YA K   KK ++  +   +    I RE+ I R 
Sbjct: 27  HYEMGEELGSGQFAIVRKCRQKGTGKEYAAK-FIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           +   PNI+ L    E++T V +++EL  GG+LFD +  K   +E +A   L+ I++ V+ 
Sbjct: 86  IR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 143 CHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
            HS  + H DLKPEN   + ++  N  +K+ DFG A
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-----IRR 81
           Y  G  LG G+F +   C E ST + YA K + K+     A    + R EI+     +R+
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVCREEIEREVSILRQ 71
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
           +L   PNI+ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN
Sbjct: 72  VL--HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 142 VCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
             H+  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 18/189 (9%)
Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG 249
           D  V+   K +  M + +KL + +I +     + Q LK  F+ +D +  G ++  +LR G
Sbjct: 21  DIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKG 80
Query: 250 LTKVGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKD 308
           L + G ML   FD+  L++  D DG+G IDYTEF AA I R++L + + +  AF+ FD D
Sbjct: 81  LERSGLMLPPNFDL--LLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 309 NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI 368
           N G            T   ++H+  +  K+   GN  + R +N +KK++ + D +G+G I
Sbjct: 138 NDG----------EITTAELAHVLFNGNKR---GNITE-RDVNQVKKMIREVDKNGDGKI 183
Query: 369 DFIEFVNLM 377
           DF EF  +M
Sbjct: 184 DFYEFSEMM 192

>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 185 GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD 244
           G     ++++  +K F++ ++LKK+ + +I ++L   E   L+  FI +D D +GTLS  
Sbjct: 18  GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQ 77
Query: 245 ELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQY 304
           E+  GL K+G      D+ Q++   D + +G I YT+F AATI +Q   + E     F++
Sbjct: 78  EILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKF 137
Query: 305 FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDG 364
           FD D +G    +  VE  + I             FG  + +       +  L+ + D++G
Sbjct: 138 FDIDGNG----KISVEELKRI-------------FGRDDIENPLIDKAIDSLLQEVDLNG 180
Query: 365 NGNIDFIEFVNLMT 378
           +G IDF EF+ +M+
Sbjct: 181 DGEIDFHEFMLMMS 194

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIR 80
           +Y    +LGRG   V   C    T   YA K +       ++  ++   RE     + I 
Sbjct: 5   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R +SG PNI++LK  +E  T   +V +L + G+LFD +  K   SE++   ++RA++  +
Sbjct: 65  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              H + ++HRDLKPEN   I  DD+  +K+TDFG
Sbjct: 125 CALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 156

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPK--MKYAENDMMIRREIQIRRLLS 84
           Y  G  LG G+F +   C E ST + YA K + K+     +   +   I RE+ I R + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN  H
Sbjct: 74  HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           +  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G+++  +     + E+  A  +  + NA++ CHS 
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIRR 81
           Y    +LGRG   V   C    T   YA K +       ++  ++   RE     + I R
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            +SG PNI++LK  +E  T   +V +L + G+LFD +  K   SE++   ++RA++  + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             H + ++HRDLKPEN   I  DD+  +K+TDFG
Sbjct: 139 ALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 169

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIRR 81
           Y    +LGRG   V   C    T   YA K +       ++  ++   RE     + I R
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            +SG PNI++LK  +E  T   +V +L + G+LFD +  K   SE++   ++RA++  + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             H + ++HRDLKPEN   I  DD+  +K+TDFG
Sbjct: 139 ALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 169

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           LG   +  +  +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RR
Sbjct: 3   LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRR 61
Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           E++I+  L   PNI+ L     D T V++++E    G ++  +     + E+  A  +  
Sbjct: 62  EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           + NA++ CHS  V+HRD+KPEN    S   N  LK+ DFG ++
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSV 160

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
           Y  G  LG G+F +   C E ST + YA K + K+     +   +   I RE+ I R + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN  H
Sbjct: 74  HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           +  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           LG   +  +  +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RR
Sbjct: 3   LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRR 61
Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           E++I+  L   PNI+ L     D T V++++E    G ++  +     + E+  A  +  
Sbjct: 62  EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           + NA++ CHS  V+HRD+KPEN    S   N  LK+ DFG ++
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSV 160

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G+++  +     + E+  A  +  + NA++ CHS 
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
           Y  G  LG G+F +   C E ST + YA K + K+     +   +   I RE+ I R + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN  H
Sbjct: 74  HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           +  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
           Y  G  LG G+F +   C E ST + YA K + K+     +   +   I RE+ I R + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN  H
Sbjct: 74  HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           +  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
           Y  G  LG G+F +   C E ST + YA K + K+     +   +   I RE+ I R + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++ VN  H
Sbjct: 74  HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
           +  + H DLKPEN   + ++     +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 10/162 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRR-------EIQIRR 81
           R LG G +G   LC E + +   A K + K    K +Y++++  I +       EI + +
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            L   PNI++L    ED+   ++V E  +GG+LF++II +  + E DAA +++ I++ + 
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             H   ++HRD+KPEN    +++    +K+ DFG +  F ++
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 197 MKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS 255
           M++F    KL +  +  I   L   EE + L + F ++D + +G L   EL  G   + +
Sbjct: 327 MRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRN 386
Query: 256 MLTEF--------DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDK 307
              E         +V  +++  D D NG I+Y+EF +  + +Q L   E L +AF  FD 
Sbjct: 387 FKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDT 446
Query: 308 DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGN 367
           D SG         + + + N+          FGL +  +    ++L      G+ D N +
Sbjct: 447 DKSG-------KITKEELANL----------FGLTSISEKTWNDVL------GEADQNKD 483
Query: 368 --IDFIEFVNLMTDI 380
             IDF EFV++M  I
Sbjct: 484 NMIDFDEFVSMMHKI 498

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
           GK  +  +  +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE
Sbjct: 1   GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRRE 59
Query: 77  IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           ++I+  L   PNI+ L     D T V++++E    G ++  +     + E+  A  +  +
Sbjct: 60  VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            NA++ CHS  V+HRD+KPEN    S  +   LK+ DFG +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 156

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 23  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A   +E  GE  D +
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTGEKYDKS 178

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           ++LG G  G    C    T    A K +   PK          R+E+      SG P+IV
Sbjct: 16  QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---------RQEVDHHWQASGGPHIV 66
Query: 91  EL----KSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
            +    ++ H  +  + ++ME  +GG+LF RI  +G   ++ER+AA ++R I  A+   H
Sbjct: 67  CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S  + HRD+KPEN  + S++ +A+LK+TDFG A
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           ++LG G  G    C    T    A K +   PK          R+E+      SG P+IV
Sbjct: 35  QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---------RQEVDHHWQASGGPHIV 85
Query: 91  EL----KSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
            +    ++ H  +  + ++ME  +GG+LF RI  +G   ++ER+AA ++R I  A+   H
Sbjct: 86  CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S  + HRD+KPEN  + S++ +A+LK+TDFG A
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E ++    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 KVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 84
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 85  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 145 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 173

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P +  +  +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++
Sbjct: 2   PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVE 60
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I+  L   PNI+ L     D T V++++E    G ++  +     + E+  A  +  + N
Sbjct: 61  IQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           A++ CHS  V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P +  +  +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++
Sbjct: 2   PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVE 60
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I+  L   PNI+ L     D T V++++E    G ++  +     + E+  A  +  + N
Sbjct: 61  IQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           A++ CHS  V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 71
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 132 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 160

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 93
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 94  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 182

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 66
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 67  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 127 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 155

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMA----KKPKMKYAENDMMIRREIQIRRLLSGQP 87
           ++GRG   V   C   +T   +A K M     +    +  E     RRE  I R ++G P
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           +I+ L  ++E  + + +V +L + G+LFD +  K   SE++   ++R+++ AV+  H+  
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           ++HRDLKPEN      DDN  ++++DFG
Sbjct: 221 IVHRDLKPENILL---DDNMQIRLSDFG 245

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 69
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 70  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 158

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 68
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 157

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 68
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 157

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 93
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 94  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 182

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 73  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 123
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 67  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 117
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 23  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 28  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 78
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 79  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 23  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 29  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 79
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 80  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 27  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 77
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 78  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 22  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 72
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 73  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 21  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 71
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 72  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 21  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 71
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 72  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E       A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 65  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ DFG ++
Sbjct: 125 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 153

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           ++LG G  G         T   +A K +   PK          RRE+++    S  P+IV
Sbjct: 38  QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHIV 88
Query: 91  ELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
            +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   H
Sbjct: 89  RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ +FG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIANFGWSV 159

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG GRFG  + C E +T +  A K + K   MK  E    ++ EI +   L    N+++
Sbjct: 96  ILGGGRFGQVHKCEETATGLKLAAK-IIKTRGMKDKEE---VKNEISVMNQLD-HANLIQ 150
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMH 150
           L  A E +  + +VME   GG+LFDRII + Y  +E D    ++ I   +   H M ++H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
            DLKPEN   ++RD    +K+ DFG A
Sbjct: 211 LDLKPENILCVNRDAKQ-IKIIDFGLA 236

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  +    A K + K  +++ A  +  +RRE++I+  L   
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 69
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS 
Sbjct: 70  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN    S  +   LK+ +FG ++
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIANFGWSV 158

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 8   NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 64
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G+  E++A    R IV+AV  CH 
Sbjct: 65  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 125 KFIVHRDLKAENLLL---DADMNIKIADFG 151

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 16  NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF--REVRIMKILN- 72
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 73  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 133 KYIVHRDLKAENLLL---DGDMNIKIADFG 159

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
           +EDV   Y    ++G+G F V   C    T   +A K          P +   +    ++
Sbjct: 22  FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 74
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
           RE  I  +L   P+IVEL   +  +  +++V E   G DL   I+ +      YSE  A+
Sbjct: 75  REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             +R I+ A+  CH   ++HRD+KPEN    S++++A +K+ DFG A+   E G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E       A K + K  +++    +  +RREI+I+  L   
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQSHLR-H 74
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ + +   D   +++++E    G+L+  +   G + E+ +A  +  + +A++ CH  
Sbjct: 75  PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            V+HRD+KPEN     + +   LK+ DFG ++
Sbjct: 135 KVIHRDIKPENLLMGYKGE---LKIADFGWSV 163

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   PK          RRE+++    S  P+I
Sbjct: 67  SQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKA---------RREVELHWRASQCPHI 117
Query: 90  VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+  A    + +V E   GG+LF RI  +G   ++ER+A+ + ++I  A+   
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 13  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILN- 69
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  ++++ME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 70  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 130 KRIVHRDLKAENLLL---DADMNIKIADFG 156

>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 193 VILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           V+   K +  + K +KL + +I +     + + LK  F+ +D D  G ++ ++L+ GL K
Sbjct: 21  VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 253 VGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
            G  L   FD+  L++  D DG+G IDYTEF AA + R++L + + +  AF+ FD DN G
Sbjct: 81  DGLKLPYNFDL--LLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDG 137
Query: 312 YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI 371
                       T   ++HI  +  KK   GN  Q R +N +K+++   D + +G IDF 
Sbjct: 138 ----------EITTAELAHILYNGNKK---GNITQ-RDVNRVKRMIRDVDKNNDGKIDFH 183
Query: 372 EFVNLM 377
           EF  +M
Sbjct: 184 EFSEMM 189

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILN- 72
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  ++++ME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 73  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 133 KRIVHRDLKAENLLL---DADMNIKIADFG 159

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 14  PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           P +  P +  ++H    Y   + +G G FGV  L  +  +N   A K + +  K+  A N
Sbjct: 4   PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--AAN 61
Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
              ++REI   R L   PNIV  K      T + +VME   GG+LF+RI   G +SE +A
Sbjct: 62  ---VKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
               + +++ V+ CH+M V HRDLK EN   +       LK+ DFG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICDFG 162

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 12  RYPILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
           R P+   P +  ++H    Y F + +G G FGV  L  +  T    A K + +      A
Sbjct: 3   RAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-----A 57
Query: 68  ENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER 127
             D  ++REI   R L   PNIV  K      T + ++ME   GG+L++RI   G +SE 
Sbjct: 58  AIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED 116
Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +A    + +++ V+ CHSM + HRDLK EN   +       LK+ DFG
Sbjct: 117 EARFFFQQLLSGVSYCHSMQICHRDLKLEN-TLLDGSPAPRLKICDFG 163

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   + +G G FGV  L  +  +N   A K + +  K+     D  ++REI   R L   
Sbjct: 20  YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI-----DENVKREIINHRSLR-H 73
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV  K      T + +VME   GG+LF+RI   G +SE +A    + +++ V+ CH+M
Sbjct: 74  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
            V HRDLK EN   +       LK+ DFG
Sbjct: 134 QVCHRDLKLEN-TLLDGSPAPRLKICDFG 161

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A + + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A + + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++VME   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y   + +G+G F    L     T    A K + K      +   +   RE++I ++L+ 
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIXKVLN- 71
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV+L    E E  +++V E   GG++FD ++A G   E++A    R IV+AV  CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             ++HRDLK EN      D +  +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADXNIKIADFG 158

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  G  LG G FG   +     T    A K + ++ K++  +    I+REIQ  +L   
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFR- 69
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       T   +VME   GG+LFD I   G   E +A  + + I++AV+ CH 
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             V+HRDLKPEN      D +   K+ DFG
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFG 156

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG G FG   L T   T    A K ++++  +K ++  M + REI   +LL   
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ-LLKKSDMHMRVEREISYLKLLR-H 68
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P+I++L       T + +V+E   GG+LFD I+ K   +E +     + I+ A+  CH  
Sbjct: 69  PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
            ++HRDLKPEN      DDN  +K+ DFG
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFG 153

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  G  LG G FG   +     T    A K + ++ K++  +    I+REIQ  +L   
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFR- 69
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       T   +VME   GG+LFD I   G   E +A  + + I++AV+ CH 
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             V+HRDLKPEN      D +   K+ DFG
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFG 156

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 14  PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           P +  P +  ++H    Y   + +G G FGV  L  +  +N   A K + +  K+     
Sbjct: 4   PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----- 58
Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
           D  ++REI   R L   PNIV  K      T + +VME   GG+LF+RI   G +SE +A
Sbjct: 59  DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
               + +++ V+ CH+M V HRDLK EN   +       LK+  FG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICAFG 162

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 14  PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           P +  P +  ++H    Y   + +G G FGV  L  +  +N   A K + +  K+     
Sbjct: 4   PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----- 58
Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
           D  ++REI   R L   PNIV  K      T + +VME   GG+LF+RI   G +SE +A
Sbjct: 59  DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
               + +++ V+ CH+M V HRDLK EN   +       LK+  FG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICAFG 162

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  G  LG G FG   +     T    A K + ++ K++  +    IRREIQ  +L   
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ-KIRSLDVVGKIRREIQNLKLFR- 74
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       + + +VME   GG+LFD I   G   E+++  + + I++ V+ CH 
Sbjct: 75  HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             V+HRDLKPEN      D +   K+ DFG
Sbjct: 135 HMVVHRDLKPENVLL---DAHMNAKIADFG 161

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 14  PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
           P +  P +  ++H    Y   + +G G FGV  L  +   N   A K + +  K+     
Sbjct: 4   PAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKI----- 58
Query: 70  DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
           D  ++REI   R L   PNIV  K      T + +VME   GG+LF+RI   G +SE +A
Sbjct: 59  DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
               + +++ V+  H+M V HRDLK EN   +       LK+ DFG
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLEN-TLLDGSPAPRLKIADFG 162

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  EI+I + 
Sbjct: 11  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 71  LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 168

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  EI+I + 
Sbjct: 12  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 72  LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  EI+I + 
Sbjct: 12  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 72  LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  EI+I + 
Sbjct: 18  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 78  LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 175

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  EI+I + 
Sbjct: 12  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 72  LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R LG+G+FG  YL  E       A K + K  +++    +  +RREI+I+  L   PNI+
Sbjct: 20  RPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            + +   D   +++++E    G+L+  +   G + E+ +A  +  + +A++ CH   V+H
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSAL 178
           RD+KPEN     + +   LK+ DFG ++
Sbjct: 138 RDIKPENLLMGYKGE---LKIADFGWSV 162

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM 271
           K + E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 272 DGNGAIDYTEFTAATIQ 288
           D +G IDY EF AAT+ 
Sbjct: 71  DKSGTIDYGEFIAATVH 87

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           Y   + LG G FG   L    +T    A K + KK     A++DM   I REI   RLL 
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 72
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P+I++L    + +  + +V+E   G +LFD I+ +   SE++A    + I++AV  CH
Sbjct: 73  -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              ++HRDLKPEN      D++  +K+ DFG
Sbjct: 131 RHKIVHRDLKPENLLL---DEHLNVKIADFG 158

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           Y   + LG G FG   L    +T    A K + KK     A++DM   I REI   RLL 
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 62
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P+I++L    + +  + +V+E   G +LFD I+ +   SE++A    + I++AV  CH
Sbjct: 63  -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              ++HRDLKPEN      D++  +K+ DFG
Sbjct: 121 RHKIVHRDLKPENLLL---DEHLNVKIADFG 148

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           Y   + LG G FG   L    +T    A K + KK     A++DM   I REI   RLL 
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 71
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P+I++L    + +  + +V+E   G +LFD I+ +   SE++A    + I++AV  CH
Sbjct: 72  -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              ++HRDLKPEN      D++  +K+ DFG
Sbjct: 130 RHKIVHRDLKPENLLL---DEHLNVKIADFG 157

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           Y   + LG G FG   L    +T    A K + KK     A++DM   I REI   RLL 
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 66
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P+I++L    + +  + +V+E   G +LFD I+ +   SE++A    + I++AV  CH
Sbjct: 67  -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              ++HRDLKPEN      D++  +K+ DFG
Sbjct: 125 RHKIVHRDLKPENLLL---DEHLNVKIADFG 152

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A + ++K+       + A+  + +  EI+I + 
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 211 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 308

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
           Y   + LG G  G   L  E  T    A + ++K+       + A+  + +  EI+I + 
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         ++ AV  
Sbjct: 197 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            H  G++HRDLKPEN    S++++ L+K+TDFG + +  E
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQ 78
           ++ V+ HY     LG G FGV +  TE +T   +A K +     M   E+D   +R+EIQ
Sbjct: 46  HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-----MTPHESDKETVRKEIQ 100
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIV 137
              +L   P +V L  A ED+  + ++ E   GG+LF+++       SE +A   +R + 
Sbjct: 101 TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 159
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             +   H    +H DLKPEN  F ++  N  LK+ DFG
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFG 196

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 63
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 64  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 123 GITHRDIKPENLLLDERDN---LKISDFGLATVF 153

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQ 78
           ++ V+ HY     LG G FGV +  TE +T   +A K +     M   E+D   +R+EIQ
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-----MTPHESDKETVRKEIQ 206
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIV 137
              +L   P +V L  A ED+  + ++ E   GG+LF+++       SE +A   +R + 
Sbjct: 207 TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 265
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             +   H    +H DLKPEN  F ++  N  LK+ DFG
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFG 302

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    ST   YA K ++K   +K +++      R+I      + 
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 132
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG +HRD+KP+N      D +  LK+ DFG+ +   +EG
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 227

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    ST   YA K ++K   +K +++      R+I      + 
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 127
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG +HRD+KP+N      D +  LK+ DFG+ +   +EG
Sbjct: 187 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 222

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G +G   L     T    A K +  K  +   EN   I++EI I  +L+ +
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINAMLNHE 65
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 66  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    ST   YA K ++K   +K +++      R+I      + 
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 132
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG +HRD+KP+N      D +  LK+ DFG+ +   +EG
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 227

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 26  HYSFGRMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           H+   ++LG+G FG  +L    T   +   YA K + KK  +K  +    +R +++ R +
Sbjct: 29  HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-KKATLKVRDR---VRTKME-RDI 83
Query: 83  LS--GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L+    P +V+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +   +
Sbjct: 84  LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +  HS+G+++RDLKPEN      D+   +K+TDFG
Sbjct: 144 DHLHSLGIIYRDLKPENILL---DEEGHIKLTDFG 175

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   + LG G  G   L     T    A K +  K  +   EN   I++EI I ++L+ +
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H +
Sbjct: 65  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           G+ HRD+KPEN     RD+   LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F  T L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
           +EDV   Y    ++G+G F V   C    T   +A K          P +   +    ++
Sbjct: 22  FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 74
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
           RE  I  +L   P+IVEL   +  +  +++V E   G DL   I+ +      YSE  A+
Sbjct: 75  REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             +R I+ A+  CH   ++HRD+KP      S++++A +K+  FG A+   E G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
           Y   +++GRG FG   L    ++   YA K ++K   +K +++      R+I      + 
Sbjct: 77  YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 133
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V+L  A +D+  +++VME   GGDL + +++     E+ A      +V A++  HS
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           MG++HRD+KP+N      D +  LK+ DFG+ +  +E G
Sbjct: 193 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETG 228

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
           +EDV   Y    ++G+G F V   C    T   +A K          P +   +    ++
Sbjct: 24  FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 76
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
           RE  I  +L   P+IVEL   +  +  +++V E   G DL   I+ +      YSE  A+
Sbjct: 77  REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 135
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             +R I+ A+  CH   ++HRD+KP      S++++A +K+  FG A+   E G
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 88
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  ++ V
Sbjct: 149 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LGRG FG+ + C E S+   Y    MAK  K+K   + +++++EI I   ++  
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETSSKKTY----MAKFVKVK-GTDQVLVKKEISILN-IARH 60
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHS 145
            NI+ L  + E    + ++ E   G D+F+RI    +  +ER+    +  +  A+   HS
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             + H D++PEN  + +R  +  +K+ +FG A
Sbjct: 121 HNIGHFDIRPENIIYQTRRSST-IKIIEFGQA 151

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 88
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 149 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y     LG G FGV + C E +T   +  K +       Y  +   ++ EI I   L  
Sbjct: 52  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFI----NTPYPLDKYTVKNEISIMNQLH- 106
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCH 144
            P ++ L  A ED+  + +++E   GG+LFDRI A+ Y  SE +    +R     +   H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              ++H D+KPEN    ++  ++ +K+ DFG A
Sbjct: 167 EHSIVHLDIKPENIMCETKKASS-VKIIDFGLA 198

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 66
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 67  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 127 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 73
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 74  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 134 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 67
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 128 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 31  RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
           ++LG+G FG  +L  + S       YA K + KK  +K  +    +R +++   L+    
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 85
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P IV+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +  A++  HS+
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           G+++RDLKPEN      D+   +K+TDFG
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFG 171

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 31  RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
           ++LG+G FG  +L  + S       YA K + KK  +K  +    +R +++   L+    
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 85
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P IV+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +  A++  HS+
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           G+++RDLKPEN   I  D+   +K+TDFG
Sbjct: 146 GIIYRDLKPEN---ILLDEEGHIKLTDFG 171

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 92
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  ++ V
Sbjct: 153 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 31  RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
           ++LG+G FG  +L  + S       YA K + KK  +K  +    +R +++   L+    
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 86
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P IV+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +  A++  HS+
Sbjct: 87  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           G+++RDLKPEN      D+   +K+TDFG
Sbjct: 147 GIIYRDLKPENILL---DEEGHIKLTDFG 172

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 68
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 69  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 129 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 69
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 70  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 130 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +  GR LG+G+FG  YL  E  ++   A K + K  +++    +  +RREI+I+  L   
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-QIEKEGVEHQLRREIEIQAHLH-H 82
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNI+ L +   D   +++++E    G+L+  +     + E+  A ++  + +A+  CH  
Sbjct: 83  PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 147 GVMHRDLKPEN 157
            V+HRD+KPEN
Sbjct: 143 KVIHRDIKPEN 153

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ--PN 88
           + LG G FG   L     T   YA K + K+  +K  E    I   +  +R+L     P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE----IEHTLNEKRILQAVNFPF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGLA 188

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG ID+ 
Sbjct: 3   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
           EF     ++ K   SE + +AF+ FDKD +GY    +  E    + N+    TD+     
Sbjct: 63  EFLTMMARKMKDTDSEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE---- 115
Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                       + +++ + +IDG+G +++ EFV +MT
Sbjct: 116 ------------VDEMIREANIDGDGQVNYEEFVQMMT 141

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           L+ ++ + D DGNG IDF EF+ +M    K    E + +AF+  DK+ + +I+  EL   
Sbjct: 44  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHV 103
Query: 413 FKENNMGD---DATIKEIISEVGRD 434
               N+G+   D  + E+I E   D
Sbjct: 104 M--TNLGEKLTDEEVDEMIREANID 126

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG G +              YA K + K+       +   + RE++      G  NI+E
Sbjct: 20  LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA----GHSRSRVFREVETLYQCQGNKNILE 75
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
           L    ED+T  ++V E  QGG +   I  + +++ER+A+ V+R +  A++  H+ G+ HR
Sbjct: 76  LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDF 174
           DLKPEN    S +  + +K+ DF
Sbjct: 136 DLKPENILCESPEKVSPVKICDF 158

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGFA 188

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 92
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 153 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 96
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 97  PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 157 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 40  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 95
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 155
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 156 IYRDLKPENLLI---DQQGYIQVTDFGFA 181

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 94
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H  
Sbjct: 95  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  +  V
Sbjct: 155 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K   S E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 68  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSG 85
           Y     +G+G +GV  +  EN T    A K M K    +    D+  I+ E+++ + L  
Sbjct: 28  YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH- 86
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI--------------------------- 118
            PNI  L   +EDE  + +VMELC GG L D++                           
Sbjct: 87  HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 119 ---IAKGYYSERDA----------APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD 165
              I    +  R++          + ++R I +A++  H+ G+ HRD+KPENF F S + 
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNK 205
Query: 166 NALLKVTDFG 175
           +  +K+ DFG
Sbjct: 206 SFEIKLVDFG 215

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDQMIREADIDGDGQVNYEEFVQMMT 147

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 34  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 89
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 90  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 149
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D+   ++VTDFG A
Sbjct: 150 IYRDLKPENLLI---DEQGYIQVTDFGFA 175

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 387
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 388 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 413

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 374
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 375 VM--TNLGEKLTDEEV 388

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 213 VIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD 272
            + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D D
Sbjct: 3   AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 273 GNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
           GNG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+   
Sbjct: 63  GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEK 119
Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
            TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 120 LTDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 150

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 52  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 111
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 112 VM--TNLGEKLTDEEV 125

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 2   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 62  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 118
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 148

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 50  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 109
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 110 VM--TNLGEKLTDEEV 123

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 387
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 388 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 413

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 374
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 375 VM--TNLGEKLTDEEV 388

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 62  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEXLT 118
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEXLTDEEV 122

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEXLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 108 VM--TNLGEXLTDEEV 121

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 422
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 423 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 448

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 350 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 409
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 410 VM--TNLGEKLTDEEV 423

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 384
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 385 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 410

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 312 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 371
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 372 VM--TNLGEKLTDEEV 385

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 31  RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           ++LG G +G  +L  + S   T   YA K + K   ++ A+     R E Q+   +   P
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            +V L  A + ET +H++++   GG+LF  +  +  ++E +    +  IV A+   H +G
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           +++RD+K EN      D N  + +TDFG
Sbjct: 180 IIYRDIKLENILL---DSNGHVVLTDFG 204

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ--PN 88
           + LG G FG   L     T   YA K + K+  +K  E    I   +  +R+L     P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE----IEHTLNEKRILQAVNFPF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIQVTDFGLA 188

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LGRG+F V   C   ST   YA K + K+ + +    +++   EI +  L    P ++ L
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL--HEIAVLELAKSCPRVINL 94
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
              +E+ + + +++E   GG++F   + +     SE D   +++ I+  V   H   ++H
Sbjct: 95  HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
            DLKP+N    S      +K+ DFG
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFG 179

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 33  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 88
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 89  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 148
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 149 IYRDLKPENLLI---DQQGYIQVTDFGFA 174

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           + FG++LG G F    L  E +T+  YA K + K+  +K  +   + R    + RL    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P  V+L    +D+  ++  +   + G L   I   G + E         IV+A+   H  
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           G++HRDLKPEN   I  +++  +++TDFG+A +   E  +A  ++ V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +G   F +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 147

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
           G ID+ EF     ++ K +  E + +AF+ FDKD +G   F +  E    + N+    TD
Sbjct: 61  GTIDFPEFLTMMARKMK-DSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLTD 116
Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 117 EE----------------VDEMIREADIDGDGQVNYEEFVTMMT 144

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           L+ ++ + D DGNG IDF EF+ +M    K ++ E + +AF+  DK+ + FI+  EL   
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMK-DSEEEIREAFRVFDKDGNGFISAAELRHV 106
Query: 413 FKENNMGDDATIKEI 427
               N+G+  T +E+
Sbjct: 107 M--TNLGEKLTDEEV 119

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 118
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 144

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 46  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 105
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 106 VM--TNLGEKLTDEEV 119

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLII---DQQGYIQVTDFGFA 188

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +G   F +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 147

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIQVTDFGFA 188

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 7   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 67  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 123
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 124 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 152

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 54  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 113
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 114 VM--TNLGEKLTDEEV 127

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 3   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 63  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 119
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 120 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 145

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 1   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 61  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 117
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 143

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 45  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 104
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 105 VM--TNLGEKLTDEEV 118

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   +A K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + +G G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GGD+F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188

>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 118
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 144

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   +A K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E + +AF+ FDKD +G   F +  E    + N+    
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIRESDIDGDGQVNYEEFVTMMT 147

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + FI+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   +A K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + +G G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GGD+F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 68  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +G   F +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 146

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + FI+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG ID+ 
Sbjct: 3   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+    
Sbjct: 63  EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 116
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        + +++ + DIDG+G +++ EFV +MT
Sbjct: 117 -------------VDEMIREADIDGDGQVNYEEFVQMMT 142

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 44  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 103
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 104 VM--TNLGEKLTDEEV 117

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +G   F +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 146

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + FI+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGFA 188

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG ID+ 
Sbjct: 5   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+    
Sbjct: 65  EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 118
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 -------------VDEMIREADIDGDGQVNYEEFVQMMT 144

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 46  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 105
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 106 VM--TNLGEKLTDEEV 119

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75  REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+ + +++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75  REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+ + +++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 76  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 75  REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+ + +++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 75  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 182

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 40  KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 95
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 155
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 156 IYRDLKPENLLI---DQQGYIQVTDFGFA 181

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 88  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 75  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 182

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 89  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     +  K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
                N+G+  T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 95  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 202

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E  N   + 
Sbjct: 48  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 215

>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+G ID+ 
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 281 EFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           EF     ++ K   S E + +AF+ FDKD +GY    +  E    + N+    TD+    
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 420
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        + +++ + DIDG+G +++ EFV +MT
Sbjct: 421 -------------VDEMIREADIDGDGQVNYEEFVQMMT 446

>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K   S E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447

>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            E L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF +   ++ K + S E L +AF+ FD+D +G      ++ + +    + H+ T
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG------LISAAE----LRHVMT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +  +K            + + +++ + DIDG+G+I++ EFV +M
Sbjct: 111 NLGEKL---------TDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G ++E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           R LG G FG   L     T   YA K + K+   K+K  E+ +  +R  Q        P 
Sbjct: 48  RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++V+E   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KV DFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIKVADFGFA 189

>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+G ID+ 
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 281 EFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           EF     ++ K   S E + +AF+ FDKD +GY    +  E    + N+    TD+    
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 420
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        + +++ + DIDG+G +++ EFV +MT
Sbjct: 421 -------------VDEMIREADIDGDGQVNYEEFVQMMT 446

>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+G I
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 412
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 413 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 438

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + +G G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188

>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 420
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + +++ + DIDG+G +++ EFV +MT
Sbjct: 421 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 446

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 42  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 97
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 98  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 158 IYRDLKPENLLI---DQQGYIQVTDFGFA 183

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189

>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 182 EEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGT 240
           E G E     + I  M++F+   KL +  +  +   L   EET+ L + F  +D + +G 
Sbjct: 20  ESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQ 79
Query: 241 LSYDELRAGLTKV-GSMLTEFDVKQL-------MEAADMDGNGAIDYTEFTAATIQRQKL 292
           L   EL  G +K+ G  +  FD+ Q+       + AAD D NG IDY+EF    + R+ L
Sbjct: 80  LDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL 139
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
              + L  AFQ FD+D +G    +  V+   ++  + H+ +                   
Sbjct: 140 LSKDKLESAFQKFDQDGNG----KISVDELASVFGLDHLES-----------------KT 178
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL 388
            K+++   D + +G++DF EF  ++  +     P+L
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNEPQL 214

>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E ++ L+  F++ DK+  G       ++  + I   S +  ++   F L   +     + 
Sbjct: 60  EETKELTDIFRHIDKNGDG------QLDRQELIDGYSKLSGEEVAVFDLPQIE-----SE 108
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           +  ++   D D NG ID+ EFV +  D   L + + LE AFQ  D++ +  I+V+EL + 
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
Query: 413 FKENNMGDDATIKEIISEV 431
           F  +++ +  T KE+IS +
Sbjct: 169 FGLDHL-ESKTWKEMISGI 186

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + +IDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREANIDGDGQVNYEEFVQMMT 146

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREANID 131

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+  ++++ 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 10  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 70  SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 167

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 10  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 70  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 167

>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG+
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY    +  E    + N+    T
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           D+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 68  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
           +S  R++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86  Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P IV +  A      +  +++L  GGDL   +   G +SE D       I+  +   H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +  V++RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
           +S  R++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86  Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P IV +  A      +  +++L  GGDL   +   G +SE D       I+  +   H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +  V++RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 9   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 69  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 166

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
           +S  R++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 248
Query: 86  Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P IV +  A      +  +++L  GGDL   +   G +SE D       I+  +   H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +  V++RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 309 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 352

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+  ++++ 
Sbjct: 33  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 93  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 190

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     T   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 48  KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
           +S  R++GRG FG  Y C +  T   YA K + KK  KMK  E  + +   I +  + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86  Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P IV +  A      +  +++L  GGDL   +   G +SE D       I+  +   H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           +  V++RDLKP N   I  D++  ++++D G A  F ++   AS  T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG   L     +   YA K + K+   K+K  E+ +  +R +Q        P 
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V+L+ + +D + +++VME   GG++F  +   G + E  A      IV      HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++RDLKPEN      D    ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+  ++++ 
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++ 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
           Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+  ++++ 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV  
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
           CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E L +AF+ FDKD +G   F +  E    + N+    T
Sbjct: 61  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           D+                 + +++ + D+DG+G +++ EFV +M
Sbjct: 118 DEE----------------VDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+NLM    K  ++ E L++AF+  DK+ + FI+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREADVD 131

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 1   LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF     ++ K  +  E L +AF+ FDKD +G   F +  E    + N+    TD+ 
Sbjct: 61  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLTDEE 117
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                           + +++ + D+DG+G +++ EFV +M
Sbjct: 118 ----------------VDEMIREADVDGDGQVNYEEFVQVM 142

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+NLM    K  ++ E L++AF+  DK+ + FI+  EL  
Sbjct: 45  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRH 104
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 105 VM--TNLGEKLTDEEVDEMIREADVD 128

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E L +AF+ FDKD +G   F +  E    + N+    T
Sbjct: 61  GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           D+                 + +++ + D+DG+G +++ EFV +M
Sbjct: 118 DEE----------------VDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+NLM    K  ++ E L++AF+  DK+ + FI+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREADVD 131

>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 4   LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF +   ++ K + S E L +AF+ FD+D +G      ++ + +    + H+ T+  
Sbjct: 64  DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG------LISAAE----LRHVMTNLG 113
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +K            + + +++ + DIDG+G+I++ EFV +M
Sbjct: 114 EKL---------TDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           +G+  ED    +  G +LG+G F   Y      T +  A K + KK   K A     ++ 
Sbjct: 6   IGEKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQN 60
Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVL 133
           E++I   L   P+I+EL +  ED   V++V+E+C  G++ +R +      +SE +A   +
Sbjct: 61  EVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFM 118
Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             I+  +   HS G++HRDL   N   ++R+ N  +K+ DFG A
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNL-LLTRNMN--IKIADFGLA 159

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  ++    KE F   D D +G ++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E L +AF+ FDKD +G   F +  E    + N+    
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           TD+                 + +++ + D+DG+G I++ EFV +M
Sbjct: 118 TDEE----------------VDEMIREADVDGDGQINYEEFVKVM 146

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+NLM    K  ++ E L++AF+  DK+ + FI+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 109 VM--TNLGEKLTDEEVDEMIREADVD 132

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL--- 83
           Y  G +LG+G FG  +     +  +  A K + +   + ++     +   +++  L    
Sbjct: 33  YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 84  --SGQPNIVELKSAHEDETAVHVVME-LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
              G P ++ L    E +    +V+E      DLFD I  KG   E  +      +V A+
Sbjct: 93  AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
             CHS GV+HRD+K EN     R   A  K+ DFGS  L  +E     D T V
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHDEPYTDFDGTRV 203

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  ++    KE F   D D +G ++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG ID+ EF     ++ K  +  E L +AF+ FDKD +G   F +  E    + N+    
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           TD+                 + +++ + D+DG+G I++ EFV +M
Sbjct: 118 TDEE----------------VDEMIREADVDGDGQINYDEFVKVM 146

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF+NLM    K  ++ E L++AF+  DK+ + FI+  EL  
Sbjct: 49  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
                N+G+   D  + E+I E   D
Sbjct: 109 VM--TNLGEKLTDEEVDEMIREADVD 132

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     LG G     YL  +   N+  A K++   P+ K  E      RE+     LS Q
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-EETLKRFEREVHNSSQLSHQ 71
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
            NIV +    E++   ++VME  +G  L + I + G  S   A      I++ +   H M
Sbjct: 72  -NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            ++HRD+KP+N      D N  LK+ DFG A    E
Sbjct: 131 RIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSE 163

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 21  EDVML-HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREI 77
           EDV   H+   R +G+G FG   +  +N T   YA K M K+   K  E + +  + +E+
Sbjct: 10  EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ---KCVERNEVRNVFKEL 66
Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
           QI + L   P +V L  + +DE  + +V++L  GGDL   +    ++ E      +  +V
Sbjct: 67  QIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            A++   +  ++HRD+KP+N   I  D++  + +TDF  A +   E
Sbjct: 126 MALDYLQNQRIIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRE 168

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y  GR LG+G F   Y  T+  T   +A K + K   +K  + + M   EI I + L
Sbjct: 25  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 83
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P++V      ED+  V+VV+E+C+   L +    +   +E +A   +R  +  V   
Sbjct: 84  D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           H+  V+HRDLK  N      +D+  +K+ DFG A   E +G    D
Sbjct: 143 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKD 185

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y  GR LG+G F   Y  T+  T   +A K + K   +K  + + M   EI I + L
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P++V      ED+  V+VV+E+C+   L +    +   +E +A   +R  +  V   
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           H+  V+HRDLK  N      +D+  +K+ DFG A   E +G    D
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKD 201

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 24/164 (14%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR-----LLSG 85
           +++GRG F    +     T   YA K M K         DM+ R E+   R     L++G
Sbjct: 67  KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW--------DMLKRGEVSCFREERDVLVNG 118
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR----AIVNAV 140
            +  I +L  A +DE  +++VME   GGDL   +++K  + ER  A + R     IV A+
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAI 175
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           +  H +G +HRD+KP+N   I  D    +++ DFGS L    +G
Sbjct: 176 DSVHRLGYVHRDIKPDN---ILLDRCGHIRLADFGSCLKLRADG 216

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+ Q ++E F   DTD +GT+   EL+  +  +G    + ++K+++   D DG+G I
Sbjct: 22  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 278 DYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF T  T +  + +  E + KAF+ FD DNSG            TI+++  +    A
Sbjct: 82  DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSG----------TITIKDLRRV----A 127
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           K+ G   T++      L++++ + D + +  ID  EF+ +M
Sbjct: 128 KELGENLTEE-----ELQEMIAEADRNDDNEIDEDEFIRIM 163

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
           +KK++ + D DG+G IDF EF+ +MT  + + ++ E + KAF+  D ++   IT+ +L  
Sbjct: 66  IKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRR 125
Query: 412 AFKENNMGDDAT---IKEIISEVGRD 434
             KE  +G++ T   ++E+I+E  R+
Sbjct: 126 VAKE--LGENLTEEELQEMIAEADRN 149

>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL      +G   TE +++  +   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY           +   + H+ T
Sbjct: 62  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 111
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +  +K              + + + + DIDG+G +++ EFV   T
Sbjct: 112 NLGEKL---------TDEEVDQXIREADIDGDGQVNYEEFVQXXT 147

>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL      +G   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G ID+ EF     ++ K  +  E + +AF+ FDKD +GY           +   + H+ T
Sbjct: 61  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +  +K              + + + + DIDG+G +++ EFV   T
Sbjct: 111 NLGEKL---------TDEEVDEXIREADIDGDGQVNYEEFVQXXT 146

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y  GR LG+G F   Y  T+  T   +A K + K   +K  + + M   EI I + L
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P++V      ED+  V+VV+E+C+   L +    +   +E +A   +R  +  V   
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           H+  V+HRDLK  N      +D+  +K+ DFG A   E +G
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDG 196

>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
               + + E F ++DT+ NG+LS+ E+   L  VG  + ++D+ ++++A D++  G I Y
Sbjct: 35  NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITY 92
Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           TEF A   + + +E S +L  AF   DKD  GY
Sbjct: 93  TEFMAGCYRWKNIE-STFLKAAFNKIDKDEDGY 124

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y  GR LG+G F   Y  T+  T   +A K + K   +K  + + M   EI I + L
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P++V      ED+  V+VV+E+C+   L +    +   +E +A   +R  +  V   
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           H+  V+HRDLK  N      +D+  +K+ DFG A   E +G
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDG 196

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE-NDMMIRREIQIRRLLSG 85
           + F +++G+G FG   L    +  + YA K + KK  +K  E   +M  R + ++ +   
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--K 97
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V L  + +    ++ V++   GG+LF  +  +  + E  A      I +A+   HS
Sbjct: 98  HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + +++RDLKPEN   I  D    + +TDFG
Sbjct: 158 LNIVYRDLKPEN---ILLDSQGHIVLTDFG 184

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 67
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 68  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 128 SRDVVYRDIKLENLML---DKDGHIKITDFG 155

>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +G ++  EL   +  +G   TE +++ +M   D DGN
Sbjct: 1   ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G +D+ EF     ++ K  +  E + +AF+ FDKD +G+           +   + H+ T
Sbjct: 61  GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF----------VSAAELRHVMT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
              +K          +   + +++   D DG+G +++ EFV ++
Sbjct: 111 RLGEKL---------SDEEVDEMIRAADTDGDGQVNYEEFVRVL 145

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 10  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 65
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 66  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 126 SRDVVYRDIKLENLML---DKDGHIKITDFG 153

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM--MIRREIQIRRLLSGQPNIV 90
           LG G +G  Y   +  TN   A K +    ++++ E  +     RE+ + + L  + NI+
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRI----RLEHEEEGVPGTAIREVSLLKELQHR-NII 96
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           ELKS       +H++ E  +  DL   +      S R     L  ++N VN CHS   +H
Sbjct: 97  ELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 151 RDLKPENFCFISRD--DNALLKVTDFGSALLF 180
           RDLKP+N      D  +  +LK+ DFG A  F
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
           + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+L   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V++RD+K EN      D +  +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQPN 88
           R LG G FG  +L         YA K + K+   ++K  E+    R  + I       P 
Sbjct: 12  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI----VTHPF 67
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC----- 143
           I+ +    +D   + ++M+  +GG+LF  ++ K   S+R   PV  A   A  VC     
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRK---SQRFPNPV--AKFYAAEVCLALEY 121
Query: 144 -HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            HS  +++RDLKPEN   I  D N  +K+TDFG A
Sbjct: 122 LHSKDIIYRDLKPEN---ILLDKNGHIKITDFGFA 153

>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +G ++ +EL   +  +    TE +++ ++   D DGNG I
Sbjct: 4   LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           ++ EF +   ++ K  +  E L +AF+ FDKD +GY    +  E    + N+    TD+ 
Sbjct: 64  EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGY---ISASELRHVMINLGEKLTDEE 120
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                           +++++ + D+DG+G +++ EFV +M
Sbjct: 121 ----------------VEQMIKEADLDGDGQVNYEEFVKMM 145

>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF  FDKD  G      + E    IR++    T++                 L+ ++ +
Sbjct: 14  EAFGLFDKDGDGC---ITVEELATVIRSLDQNPTEEE----------------LQDMISE 54
Query: 360 GDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNM 418
            D DGNG I+F EF++LM    K  +  E L++AF+  DK+ + +I+ +EL       N+
Sbjct: 55  VDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMI--NL 112
Query: 419 GDDATIKEI 427
           G+  T +E+
Sbjct: 113 GEKLTDEEV 121

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16  LGKPYEDVMLH-YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           L KP   V ++ + + ++LG+G FG   L  E +T   YA K + K+  +   E    + 
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VA 196
Query: 75  REIQIRRLL--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
             +   R+L  S  P +  LK + +    +  VME   GG+LF  +  +  +SE  A   
Sbjct: 197 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 133 LRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              IV+A++  HS   V++RDLK EN      D +  +K+TDFG
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 297

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16  LGKPYEDVMLH-YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
           L KP   V ++ + + ++LG+G FG   L  E +T   YA K + K+  +   E    + 
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VA 193
Query: 75  REIQIRRLL--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
             +   R+L  S  P +  LK + +    +  VME   GG+LF  +  +  +SE  A   
Sbjct: 194 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 133 LRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              IV+A++  HS   V++RDLK EN      D +  +K+TDFG
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 294

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG    C   +T   YACK + KK ++K  + + M   E QI   ++ +  +V
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVNSR-FVV 247
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
            L  A+E + A+ +V+ L  GGDL   I    Y+  +   P  RA+  A  +C      H
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHI----YHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
              +++RDLKPEN   I  DD+  ++++D G A+   E
Sbjct: 304 RERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPE 338

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R+LG+G FG    C   +T   YACK + KK ++K  + + M   E QI   ++ +  +V
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVNSR-FVV 247
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
            L  A+E + A+ +V+ L  GGDL   I    Y+  +   P  RA+  A  +C      H
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHI----YHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
              +++RDLKPEN   I  DD+  ++++D G A+   E
Sbjct: 304 RERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPE 338

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV + C    T    A K   +      +E+D +I+    REI++ + L   PN
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLE------SEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V L      +  +H+V E C    L +    +    E     +    + AVN CH    
Sbjct: 64  LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRD+KPEN   I++  ++++K+ DFG A L 
Sbjct: 124 IHRDVKPENI-LITK--HSVIKLCDFGFARLL 152

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI 79
           Y   M  Y   + +G G FG   L         Y  K +    +M   E +   RRE+ +
Sbjct: 19  YFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREES-RREVAV 76
Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KG-YYSERDAAPVLRAIV 137
              +   PNIV+ + + E+  ++++VM+ C+GGDLF RI A KG  + E         I 
Sbjct: 77  LANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            A+   H   ++HRD+K +N  F+++D    +++ DFG A
Sbjct: 136 LALKHVHDRKILHRDIKSQNI-FLTKDGT--VQLGDFGIA 172

>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 191 TSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG 249
           T  +  MK+F+   KL +  +  +   L   EET+ L + F ++D + +G L   EL  G
Sbjct: 6   TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 250 LTKV----GSMLTEFD-------VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL 298
             K+    G  +++ D       V  ++++ D D NG I+Y+EF    + +Q L   E L
Sbjct: 66  YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVL 358
             AFQ FD D SG             I N      +  + FG+          +L++   
Sbjct: 126 LAAFQQFDSDGSG------------KITN-----EELGRLFGVTEVDDETWHQVLQEC-- 166
Query: 359 QGDIDGNGNIDFIEFVNLMTDI 380
             D + +G +DF EFV +M  I
Sbjct: 167 --DKNNDGEVDFEEFVEMMQKI 186

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG G       C    T+  YA K + K+P    +     + RE+++     G  N++E
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR----VFREVEMLYQCQGHRNVLE 75
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
           L    E+E   ++V E  +GG +   I  + +++E +A+ V++ + +A++  H+ G+ HR
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDFG 175
           DLKPEN      +  + +K+ DFG
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFG 159

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPN 88
           RM G+G FG   L  E ST M  A K + + P+ +         RE+QI + L+    PN
Sbjct: 29  RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR--------NRELQIMQDLAVLHHPN 80
Query: 89  IVELKS-----AHEDETAVH--VVMELCQGGDLFDRIIAKGYYSERDAAP------VLRA 135
           IV+L+S        D   ++  VVME     D   R   + YY  + A P       L  
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHR-CCRNYYRRQVAPPPILIKVFLFQ 137
Query: 136 IVNAVNVCH--SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++ ++   H  S+ V HRD+KP N   +  + +  LK+ DFGSA
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHN--VLVNEADGTLKLCDFGSA 179

>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL      +G   TE +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
           G I++ EF     +  K  +  E + +AF+ FDKD +GY           +   + H+ T
Sbjct: 61  GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +  +K              + + + + DIDG+G +++ EFV   T
Sbjct: 111 NLGEKL---------TDEEVDEXIREADIDGDGQVNYEEFVQXXT 146

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           R+LG+G +G  +     T  +T   +A K + K   ++ A++    + E  I   +   P
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            IV+L  A +    +++++E   GG+LF ++  +G + E  A   L  I  A+   H  G
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           +++RDLKPEN   I  +    +K+TDFG
Sbjct: 142 IIYRDLKPEN---IMLNHQGHVKLTDFG 166

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           R+LG+G +G  +     T  +T   +A K + K   ++ A++    + E  I   +   P
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            IV+L  A +    +++++E   GG+LF ++  +G + E  A   L  I  A+   H  G
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
           +++RDLKPEN   I  +    +K+TDFG
Sbjct: 142 IIYRDLKPEN---IMLNHQGHVKLTDFG 166

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            M  + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+
Sbjct: 6   TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 61
Query: 83  L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L  S  P +  LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A+
Sbjct: 62  LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 121
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +  HS   V++RDLK EN      D +  +K+TDFG
Sbjct: 122 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 154

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            M  + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+
Sbjct: 7   TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 62
Query: 83  L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L  S  P +  LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A+
Sbjct: 63  LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 122
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +  HS   V++RDLK EN      D +  +K+TDFG
Sbjct: 123 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 155

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 3   CCVSKSQRQRYPI----LGKPY----EDVMLH---YSFGRMLGRGRFGVTYLCTENSTNM 51
           C  S  +R +Y        KP+    +++ LH   +   +++GRG FG   +    +T  
Sbjct: 41  CSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER 100
Query: 52  PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-IVELKSAHEDETAVHVVMELCQ 110
            YA K + K   +K AE     R E  +  L++G    I  L  A +DE  +++VM+   
Sbjct: 101 IYAMKILNKWEMLKRAET-ACFREERDV--LVNGDCQWITALHYAFQDENHLYLVMDYYV 157
Query: 111 GGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL 168
           GGDL   +++K      E  A   +  +V A++  H +  +HRD+KP+N   +  D N  
Sbjct: 158 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN---VLLDVNGH 213
Query: 169 LKVTDFGSALLFEEEG 184
           +++ DFGS L   ++G
Sbjct: 214 IRLADFGSCLKMNDDG 229

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 3   CCVSKSQRQRYPI----LGKPY----EDVMLH---YSFGRMLGRGRFGVTYLCTENSTNM 51
           C  S  +R +Y        KP+    +++ LH   +   +++GRG FG   +    +T  
Sbjct: 57  CSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER 116
Query: 52  PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-IVELKSAHEDETAVHVVMELCQ 110
            YA K + K   +K AE     R E  +  L++G    I  L  A +DE  +++VM+   
Sbjct: 117 IYAMKILNKWEMLKRAET-ACFREERDV--LVNGDCQWITALHYAFQDENHLYLVMDYYV 173
Query: 111 GGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL 168
           GGDL   +++K      E  A   +  +V A++  H +  +HRD+KP+N   +  D N  
Sbjct: 174 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN---VLLDVNGH 229
Query: 169 LKVTDFGSALLFEEEG 184
           +++ DFGS L   ++G
Sbjct: 230 IRLADFGSCLKMNDDG 245

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            M  + + ++LG+G FG   L  E +T   YA K + K+  +   E    +   +   R+
Sbjct: 8   TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 63
Query: 83  L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L  S  P +  LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A+
Sbjct: 64  LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 123
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +  HS   V++RDLK EN      D +  +K+TDFG
Sbjct: 124 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 156

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y   R LGRG++   +     + N     K +    K K       I+REI+I   L G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-------IKREIKILENLRGG 91
Query: 87  PNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
           PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A++ CH
Sbjct: 92  PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           SMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 149 SMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG G +GV    T   T    A K +    K  +A   +   REI+I +    +
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87  PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            NI+ +       + E+   V+++ EL Q      R+I+    S+      +   + AV 
Sbjct: 70  -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           V H   V+HRDLKP N      + N  LKV DFG A + +E   + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG G +GV    T   T    A K +    K  +A   +   REI+I +    +
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87  PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            NI+ +       + E+   V+++ EL Q      R+I+    S+      +   + AV 
Sbjct: 70  -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           V H   V+HRDLKP N      + N  LKV DFG A + +E   + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG G +GV    T   T    A K +    K  +A   +   REI+I +    +
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87  PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            NI+ +       + E+   V+++ EL Q      R+I+    S+      +   + AV 
Sbjct: 70  -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           V H   V+HRDLKP N      + N  LKV DFG A + +E   + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 80
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 81  EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 140 RDIKSDSI-LLTHDGR--VKLSDFG 161

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 84
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 85  EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 144 RDIKSDSI-LLTHDGR--VKLSDFG 165

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG G       C    T+  YA K + K+P    +     + RE+++     G  N++E
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR----VFREVEMLYQCQGHRNVLE 75
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
           L    E+E   ++V E  +GG +   I  + +++E +A+ V++ + +A++  H+ G+ HR
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDF 174
           DLKPEN      +  + +K+ DF
Sbjct: 136 DLKPENILCEHPNQVSPVKICDF 158

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 91
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 92  EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++        +  +K++DFG
Sbjct: 151 RDIKSDSILL---THDGRVKLSDFG 172

>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+ Q ++E F   DTD +GT+   EL+  +  +G    + ++K+++   D DG+G I
Sbjct: 2   LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 278 DYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           D+ EF    T +  + +  E + KAF+ FD D +G   F          +N+  +    A
Sbjct: 62  DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISF----------KNLKRV----A 107
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           K+ G   T +      L++++ + D DG+G ++  EF  +M
Sbjct: 108 KELGENMTDE-----ELQEMIDEADRDGDGEVNEEEFFRIM 143

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 89
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 90  EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 149 RDIKSDSI-LLTHDGR--VKLSDFG 170

>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+    KE F   D D +G ++  +L   +  +G   TE +++ ++     DGNG ID+ 
Sbjct: 308 EQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFP 367
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           +F     ++ K  +  E + +AF+ F KD +GY      + + Q    + H+ T+  +K 
Sbjct: 368 QFLTMMARKMKDTDSEEEIREAFRVFGKDGNGY------ISAAQ----LRHVMTNLGEKL 417
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        + +++ +  IDG+G +++ +FV +MT
Sbjct: 418 ---------TDEEVDEMIREAGIDGDGQVNYEQFVQMMT 447

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQ---- 86
           +LG+G FG          +  YA K      K+++ E  +  I  E+ +   L+ Q    
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIK------KIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 87  --------PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIV 137
                    N V+  +A + ++ + + ME C+ G L+D I ++    +RD    + R I+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            A++  HS G++HRDLKP N  FI    N  +K+ DFG A
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLA 163

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +G++S  EL   +  +G   +E +V  LM   D+DGN AI
Sbjct: 5   LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           +++EF A   ++ K   SE  L +AF+ FDK+  G      ++ + +    + H+ T   
Sbjct: 65  EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 114
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +K       +     ML+++      DG+G I+  +F  L++
Sbjct: 115 EKLTDAEVDE-----MLREVS-----DGSGEINIKQFAALLS 146

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           +AF  FDKDNSG               + S + T   +  GL  ++   A      L+ +
Sbjct: 15  EAFALFDKDNSGS-------------ISASELAT-VMRSLGLSPSEAEVA-----DLMNE 55
Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSDQFITVNELETAFKENN 417
            D+DGN  I+F EF+ LM+   K      ELLE AF+  DKN D  I+  EL+      +
Sbjct: 56  IDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE-AFKVFDKNGDGLISAAELKHVL--TS 112
Query: 418 MGD---DATIKEIISEV 431
           +G+   DA + E++ EV
Sbjct: 113 IGEKLTDAEVDEMLREV 129

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 134
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++        +  +K++DFG
Sbjct: 194 RDIKSDSILL---THDGRVKLSDFG 215

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LGRG FGV +       +  YA K + + P  + A   +M  RE++    L   P IV  
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVM--REVKALAKLE-HPGIVRY 68
Query: 93  KSAHEDETA------------VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIV 137
            +A  ++              +++ M+LC+  +L D +  +    ER+ +  L     I 
Sbjct: 69  FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            AV   HS G+MHRDLKP N  F + DD  ++KV DFG
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNI-FFTMDD--VVKVGDFG 163

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 23  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 75
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 76  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+K +N   +  D +  +K+TDFG
Sbjct: 135 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 162

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           ED +LH    +MLG+G FG  +L     TN  +A K++ KK  +   ++      E ++ 
Sbjct: 17  EDFILH----KMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 71
Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
            L    P +  +    + +  +  VME   GGDL   I +   +    A      I+  +
Sbjct: 72  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              HS G+++RDLK +N   I  D +  +K+ DFG
Sbjct: 132 QFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFG 163

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-I 89
           +++GRG FG   +    + +  +A K + K   +K AE     R E  +  L++G    I
Sbjct: 80  KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET-ACFREERDV--LVNGDSKWI 136
Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMG 147
             L  A +D+  +++VM+   GGDL   +++K      E  A   L  +V A++  H + 
Sbjct: 137 TTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            +HRD+KP+N   I  D N  +++ DFGS L   E+G
Sbjct: 196 YVHRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDG 229

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 14  YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV + +  E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 69  LN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G   +   +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T+  YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 11  RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 69
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 70  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N   +  D    +K+TD+G      +EG    D TS
Sbjct: 130 RDLKLDN---VLLDSEGHIKLTDYGMC----KEGLRPGDTTS 164

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + TE  T    A K M   K+ + +   N+++I R+           N+V
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-------HDNVV 105
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           ++ S++     + VVME  +GG L D I+     +E   A V  +++ A++  H+ GV+H
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++    S   +  +K++DFG
Sbjct: 165 RDIKSDSILLTS---DGRIKLSDFG 186

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T+  YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 15  RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 73
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 74  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N   +  D    +K+TD+G      +EG    D TS
Sbjct: 134 RDLKLDN---VLLDSEGHIKLTDYGMC----KEGLRPGDTTS 168

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T+  YA K + KK  +   E+   ++ E  +    S  P +V
Sbjct: 26  RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 84
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 85  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           RDLK +N      D    +K+TD+G      +EG    D TS
Sbjct: 145 RDLKLDNVLL---DSEGHIKLTDYGMC----KEGLRPGDTTS 179

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  + T  S+    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 211
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+ +++     + VVME  +GG L D I+     +E   A V  A++ A++V H+ GV+H
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++        +  +K++DFG
Sbjct: 271 RDIKSDSILLT---HDGRVKLSDFG 292

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 31  YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 85
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 86  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G   +   +VI
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 197

>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 5   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           +++EF A   ++ K   SE  L +AF+ FDK+  G      ++ + +    + H+ T   
Sbjct: 65  EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 114
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +K            +ML+++      DG+G I+  +F  L++
Sbjct: 115 EKLTDAEVD-----DMLREVS-----DGSGEINIQQFAALLS 146

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
           GK  E +   Y  G +LG G  G  Y     S N+P A K + K     + E  N   + 
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75  REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+  ++++ SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
              ++ AV  CH+ GV+HRD+K EN    ++R +   LK+ DFGS  L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 14  YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 69  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G   +   +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 69  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G       +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATN---AVKVVDFGIARAIADSGNSVXQTAAVI 180

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 69  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G   +   +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
           Y  G +LG G     +L  +   +   A K     +A+ P        +  RRE Q    
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83  LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           L+  P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     
Sbjct: 69  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           A+N  H  G++HRD+KP N    + +    +KV DFG A    + G   +   +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
           ++F  +LG+G FG   L     T   YA K + K   ++    E  M+ +R   +  LL 
Sbjct: 21  FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR---VLALLD 77
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +   H
Sbjct: 78  KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             G+++RDLK +N   +  D    +K+ DFG
Sbjct: 138 KRGIIYRDLKLDN---VMLDSEGHIKIADFG 165

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R++GRG +    L     T+  YA + + KK  +   E+   ++ E  +    S  P +V
Sbjct: 58  RVIGRGSYAKVLLVRLKKTDRIYAMR-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 116
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
            L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H  G+++
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
           RDLK +N      D    +K+TD+G      +EG    D TS  
Sbjct: 177 RDLKLDNVLL---DSEGHIKLTDYGMC----KEGLRPGDTTSTF 213

>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 4   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           +++EF A   ++ K   SE  L +AF+ FDK+  G      ++ + +    + H+ T   
Sbjct: 64  EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 113
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +K            +ML+++      DG+G I+  +F  L++
Sbjct: 114 EKLTDAEVD-----DMLREVS-----DGSGEINIQQFAALLS 145

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           ED  LH    +MLG+G FG  +L     TN  +A K++ KK  +   ++      E ++ 
Sbjct: 18  EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 72
Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
            L    P +  +    + +  +  VME   GGDL   I +   +    A      I+  +
Sbjct: 73  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              HS G+++RDLK +N   I  D +  +K+ DFG
Sbjct: 133 QFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFG 164

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
           Y+    +G+G  G  Y   + +T    A + M   ++PK +   N++++ RE       +
Sbjct: 23  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 75
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+   H
Sbjct: 76  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HR++K +N   +  D +  +K+TDFG
Sbjct: 135 SNQVIHRNIKSDNI-LLGMDGS--VKLTDFG 162

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           +G G  G+  L  E  +    A K M   K+ + +   N+++I R+ Q         N+V
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-------HFNVV 105
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
           E+  ++     + V+ME  QGG L D I+++   +E   A V  A++ A+   H+ GV+H
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RD+K ++   ++ D    +K++DFG
Sbjct: 165 RDIKSDSI-LLTLDGR--VKLSDFG 186

>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 4   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSG 311
           +++EF A   ++ K   SE  L +AF+ FDK+  G
Sbjct: 64  EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG 98

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 79
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 80  FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 140 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 169

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 81
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 82  FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 142 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 171

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 46  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 103
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 164 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 193

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 81
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 82  FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 142 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 171

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 105
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 166 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 195

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIVNAVNVCHSM 146
           N V+  +A + ++ + + ME C+   L+D I ++    +RD    + R I+ A++  HS 
Sbjct: 76  NFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           G++HRDLKP N  FI    N  +K+ DFG A
Sbjct: 136 GIIHRDLKPMN-IFIDESRN--VKIGDFGLA 163

>pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 28/166 (16%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    K+ F++ D +  G ++  EL   +  +G   TE +++ L+  A+ + NG +
Sbjct: 4   LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 278 DYTEFTAATI-QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR----NVSHIY 332
           ++TEF      Q ++ +  E + +AF+ FD+D  G+        SP  +R    N+    
Sbjct: 64  NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFI-------SPAELRFVMINLGEKV 116
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           TD+                 + +++ + D DG+G I++ EFV +++
Sbjct: 117 TDEE----------------IDEMIREADFDGDGMINYEEFVWMIS 146

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
           ED  L +   R+LGRG FG  + C   +T   YAC K   K+ K +      M+ ++I  
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLR 134
           +        IV L  A E +T + +VM +  GGD+   I        G+   R A     
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTA 296
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            IV+ +   H   +++RDLKPEN   +  DD+  ++++D G A+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
           ED  L +   R+LGRG FG  + C   +T   YAC K   K+ K +      M+ ++I  
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLR 134
           +        IV L  A E +T + +VM +  GGD+   I        G+   R A     
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTA 296
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
            IV+ +   H   +++RDLKPEN   +  DD+  ++++D G A+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
           ED  L +   R+LGRG FG  + C   +T   YAC K   K+ K +      M+ ++I  
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRA 135
           +        IV L  A E +T + +VM +  GGD+   I         + E  A      
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           IV+ +   H   +++RDLKPEN   +  DD+  ++++D G A+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
            LG+G F   +  ++  T   +A K + K   +K  + + M   EI I R L+ Q ++V 
Sbjct: 28  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 85
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
                ED   V VV+ELC+   L +    +   +E +A   LR IV      H   V+HR
Sbjct: 86  FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           DLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 146 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 175

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 64  MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
           M  AE  M++  E+ + R L   PNIV    +      T +++VME C+GGDL   +I K
Sbjct: 44  MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
           G     Y  E     V+  +  A+  CH        V+HRDLKP N  F+    N  +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEG--GEASDDTSVILRMKQFRRMS 204
            DFG A +   +    +A   T   +  +Q  RMS
Sbjct: 158 GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 192

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
           ED  L +   R+LGRG FG  + C   +T   YAC K   K+ K +      M+ ++I  
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRA 135
           +        IV L  A E +T + +VM +  GGD+   I         + E  A      
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
           IV+ +   H   +++RDLKPEN   +  DD+  ++++D G A+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 64  MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
           M  AE  M++  E+ + R L   PNIV    +      T +++VME C+GGDL   +I K
Sbjct: 44  MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
           G     Y  E     V+  +  A+  CH        V+HRDLKP N  F+    N  +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEGGEASD--DTSVILRMKQFRRMS 204
            DFG A +   +   A     T   +  +Q  RMS
Sbjct: 158 GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS 192

>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           YL  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 10  YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L++ F+ FD++  GY +   + E     R      
Sbjct: 70  IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAE---IFRASGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           TD+                 ++ L+  GD + +G IDF EF+ +M
Sbjct: 127 TDEE----------------IESLMKDGDKNNDGRIDFDEFLKMM 155

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
           ++F  +LG+G FG   L     T+  YA K + K   ++    E  M+ +R   +  L  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALPG 78
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +    
Sbjct: 79  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S G+++RDLK +N   +  D    +K+ DFG
Sbjct: 139 SKGIIYRDLKLDN---VMLDSEGHIKIADFG 166

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G FG  + C +      YA K  +KKP +  + ++    RE+    +L    ++V  
Sbjct: 15  IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
            SA  ++  + +  E C GG L D I        Y+ E +   +L  +   +   HSM +
Sbjct: 73  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 149 MHRDLKPENFCFISR 163
           +H D+KP N  FISR
Sbjct: 133 VHMDIKPSNI-FISR 146

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 64  MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
           M  AE  M++  E+ + R L   PNIV    +      T +++VME C+GGDL   +I K
Sbjct: 44  MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
           G     Y  E     V+  +  A+  CH        V+HRDLKP N  F+    N  +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEGGEASD--DTSVILRMKQFRRMS 204
            DFG A +   +   A +   T   +  +Q  RMS
Sbjct: 158 GDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMS 192

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G FG  + C +      YA K  +KKP +  + ++    RE+    +L    ++V  
Sbjct: 17  IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
            SA  ++  + +  E C GG L D I        Y+ E +   +L  +   +   HSM +
Sbjct: 75  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 149 MHRDLKPENFCFISR 163
           +H D+KP N  FISR
Sbjct: 135 VHMDIKPSNI-FISR 148

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           ++ F R+LG+G FG   L     T   YA K + K   ++  + +  +  E +I  L   
Sbjct: 24  NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT-EKRILSLARN 82
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P + +L    +    +  VME   GGDL   I     + E  A      I++A+   H 
Sbjct: 83  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            G+++RDLK +N   +  D     K+ DFG
Sbjct: 143 KGIIYRDLKLDN---VLLDHEGHCKLADFG 169

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G FG  + C +      YA K  +KKP +  + ++    RE+    +L    ++V  
Sbjct: 19  IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
            SA  ++  + +  E C GG L D I        Y+ E +   +L  +   +   HSM +
Sbjct: 77  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 149 MHRDLKPENFCFISR 163
           +H D+KP N  FISR
Sbjct: 137 VHMDIKPSNI-FISR 150

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G FG  + C +      YA K  +KKP +  + ++    RE+    +L    ++V  
Sbjct: 17  IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
            SA  ++  + +  E C GG L D I        Y+ E +   +L  +   +   HSM +
Sbjct: 75  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 149 MHRDLKPENFCFISR 163
           +H D+KP N  FISR
Sbjct: 135 VHMDIKPSNI-FISR 148

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           ++GRG FGV  +C        +  K +A K     +E    I    Q+ R+    PNIV+
Sbjct: 16  VVGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRV--NHPNIVK 66
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSM-- 146
           L  A  +   V +VME  +GG L++ +       YY+   A          V   HSM  
Sbjct: 67  LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 147 -GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             ++HRDLKP N   ++     +LK+ DFG+A
Sbjct: 125 KALIHRDLKPPNLLLVA--GGTVLKICDFGTA 154

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           ++GRG FGV  +C        +  K +A K     +E    I    Q+ R+    PNIV+
Sbjct: 15  VVGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRV--NHPNIVK 65
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSM-- 146
           L  A  +   V +VME  +GG L++ +       YY+   A          V   HSM  
Sbjct: 66  LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 147 -GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             ++HRDLKP N   ++     +LK+ DFG+A
Sbjct: 124 KALIHRDLKPPNLLLVA--GGTVLKICDFGTA 153

>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           ++  +  + LKE F   D D+NG +S  ELR  +  +G  LT+ +V+Q+++ AD+DG+G 
Sbjct: 2   HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 277 IDYTEFT 283
           ++Y EF 
Sbjct: 62  VNYEEFV 68

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVH--VVMELCQGGDLFDRI--IAKGY-YSERDA 129
           RE ++ + L+   NIV+L +  E+ T  H  ++ME C  G L+  +   +  Y   E + 
Sbjct: 56  REFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFC-FISRDDNALLKVTDFGSALLFEEE 183
             VLR +V  +N     G++HR++KP N    I  D  ++ K+TDFG+A   E++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVH--VVMELCQGGDLFDRI--IAKGY-YSERDA 129
           RE ++ + L+ + NIV+L +  E+ T  H  ++ME C  G L+  +   +  Y   E + 
Sbjct: 56  REFEVLKKLNHK-NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFC-FISRDDNALLKVTDFGSALLFEEE 183
             VLR +V  +N     G++HR++KP N    I  D  ++ K+TDFG+A   E++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169

>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           YL  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 10  YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L++ F+ FD++  GY +   + E     R      
Sbjct: 70  IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE---IFRASGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           TD+                 ++ L+  GD + +G IDF EF+ +M
Sbjct: 127 TDEE----------------IESLMKDGDKNNDGRIDFDEFLKMM 155

>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain Length = 70

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + LKE F   D D+NG +S  ELR  +  +G  LT+ +V+Q+++ AD+DG+G ++Y EF 
Sbjct: 4   EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 32  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 83
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 84  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 141
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 182

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 33  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 84
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 85  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 142
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 183

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 39  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 90
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 91  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 148
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 189

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 28  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 79
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 80  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 137
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 178

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 24  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 75
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 76  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 133
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 174

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQP 87
           ++G G +G+   C    T    A K   +      +++D M++    REI++ + L  + 
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLE------SDDDKMVKKIAMREIKLLKQLRHE- 84
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           N+V L    + +   ++V E      L D  +       +     L  I+N +  CHS  
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDD 190
           ++HRD+KPEN   I    + ++K+ DFG A       GE  DD
Sbjct: 145 IIHRDIKPEN---ILVSQSGVVKLCDFGFARTLAAP-GEVYDD 183

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 21  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 72
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 73  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 130
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 171

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 25  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 76
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 77  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 134
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 175

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 48  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 99
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 100 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 157
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 198

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 32  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 83
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 84  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 141
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 182

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 54  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 105
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 163
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 204

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 54  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 105
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 163
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 204

>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMD 272
           +   +E + L ++F ++D D +G+LS +E  +        L E      V+++++  D D
Sbjct: 13  HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTD 64
Query: 273 GNGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
           GNG +D+ EF     Q   K ++ + L  AF+ +D D  GY               +S+ 
Sbjct: 65  GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNG 109
Query: 332 YTDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
              +  K  +GN  K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 110 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 163

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
           ++F  +LG+G FG   L     T+  YA K + K   ++    E  M+ +R   +  L  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALPG 399
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +    
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S G+++RDLK +N   +  D    +K+ DFG
Sbjct: 460 SKGIIYRDLKLDN---VMLDSEGHIKIADFG 487

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R +G G FG  Y   +   +   A K M+   K +  E    I +E++  + L   PN +
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLR-HPNTI 117
Query: 91  ELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +  +  E    +VME C G   DL +  + K    E + A V    +  +   HS  +
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N       +  L+K+ DFGSA
Sbjct: 176 IHRDVKAGNILL---SEPGLVKLGDFGSA 201

>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMD 272
           +   +E + L ++F ++D D +G+LS +E  +        L E      V+++++  D D
Sbjct: 14  HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTD 65
Query: 273 GNGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
           GNG +D+ EF     Q   K ++ + L  AF+ +D D  GY               +S+ 
Sbjct: 66  GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNG 110
Query: 332 YTDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
              +  K  +GN  K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 111 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 164

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 56  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 107
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 108 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 165
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 206

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           R +G G FG  Y   +   +   A K M+   K +  E    I +E++  + L   PN +
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLR-HPNTI 78
Query: 91  ELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           + +  +  E    +VME C G   DL +  + K    E + A V    +  +   HS  +
Sbjct: 79  QYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K  N       +  L+K+ DFGSA
Sbjct: 137 IHRDVKAGNILL---SEPGLVKLGDFGSA 162

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 99  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 150
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 151 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 208
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 249

>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 C-Terminal Domain Length = 69

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + LKE F   D D+NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G I+Y EF 
Sbjct: 4   EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 284 AATIQR 289
              + +
Sbjct: 64  KVMMAK 69

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L 
Sbjct: 58  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 109
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 110 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 167
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 208

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQ---- 86
           +LG+G FG          +  YA K      K+++ E  +  I  E+ +   L+ Q    
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIK------KIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 87  --------PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIV 137
                    N V+  +A + ++ + +  E C+   L+D I ++    +RD    + R I+
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            A++  HS G++HR+LKP N  FI  D++  +K+ DFG A
Sbjct: 127 EALSYIHSQGIIHRNLKPXN-IFI--DESRNVKIGDFGLA 163

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y            C S       K  +      RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  EE + L+E F E D DK+G ++  +L   +  +G M TE ++ +L +  +M+  G +
Sbjct: 19  LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           D+ +F      +   E ++      L  AF+ FD +  G                +S   
Sbjct: 79  DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 123
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             +A +  LG+    R    +++++   D++G+G +DF EFV +M+
Sbjct: 124 LREAMRKLLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 166

>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  EE + L+E F E D DK+G ++  +L   +  +G M TE ++ +L +  +M+  G +
Sbjct: 5   LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           D+ +F      +   E ++      L  AF+ FD +  G                +S   
Sbjct: 65  DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 109
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             +A +  LG+    R    +++++   D++G+G +DF EFV +M+
Sbjct: 110 LREAMRALLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 152

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y            C S       K  +      RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85  GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
              NIV L+    S+ E +  V++ + L    +   R+ A+ Y   +   PV+       
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMDG 273
           +  +E + L ++F ++D D +G+LS +E  +        L E      V+++++  D DG
Sbjct: 1   MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDG 52
Query: 274 NGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           NG +D+ EF     Q   K ++ + L  AF+ +D D  GY               +S+  
Sbjct: 53  NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNGE 97
Query: 333 TDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
             +  K  +GN  K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 98  LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 150

>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q + E F   D + +G L Y EL+  +  +G  L + ++  L++  D +G   + Y 
Sbjct: 20  EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 281 EFTAA----TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           +F        ++R  L+    + +AFQ FD D++G            +I+N+  +    A
Sbjct: 80  DFYIVMGEKILKRDPLDE---IKRAFQLFDDDHTG----------KISIKNLRRV----A 122
Query: 337 KKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
           K+ G   T ++ RAM      + + D+DG+G I+  EF+ + TD
Sbjct: 123 KELGETLTDEELRAM------IEEFDLDGDGEINENEFIAICTD 160

>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  EE + L+E F E D DK+G ++  +L   +  +G M TE ++ +L +  +M+  G +
Sbjct: 5   LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           D+ +F      +   E ++      L  AF+ FD +  G                +S   
Sbjct: 65  DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 109
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             +A +  LG+    R    +++++   D++G+G +DF EFV +M+
Sbjct: 110 LREAMRKLLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 152

>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 31/170 (18%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMDGNGA 276
           +E + L ++F ++D D +G+LS +E  +        L E      V+++++  D DGNG 
Sbjct: 3   DEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDGNGE 54
Query: 277 IDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
           +D+ EF     Q   K ++ + L  AF+ +D D  GY               +S+    +
Sbjct: 55  VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNGELFQ 99
Query: 336 AKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
             K  +GN  K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 44/188 (23%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRL--- 82
           YS G+ LG G FG+     +  +   +A K + + P+ K  E D+M +   + I +L   
Sbjct: 9   YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 83  --------------------LSGQPNIVELKSAHEDETAVH--------VVMELCQGGDL 114
                               L G+ N V   + H     V+        V+ME     D 
Sbjct: 69  FYTTGDEEPKPPQPPDDHNKLGGKNNGV---NNHHKSVIVNPSQNKYLNVIMEYVP--DT 123
Query: 115 FDRIIAKGYYSERDAAPVLRAI-----VNAVNVCHSMGVMHRDLKPENFCFISRDDNALL 169
             +++     S R     L +I       AV   HS+G+ HRD+KP+N    S+D+   L
Sbjct: 124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--L 181
Query: 170 KVTDFGSA 177
           K+ DFGSA
Sbjct: 182 KLCDFGSA 189

>pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q ++E F   D D  GT+   EL+  +  +G    + ++K+++   D +G G +++ 
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           +F T  T +  + +  E + KAF+ FD D +G   F          +N+  +    AK+ 
Sbjct: 63  DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISF----------KNLKRV----AKEL 108
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           G   T +      L++++ + D DG+G +   EF+ +M
Sbjct: 109 GENLTDE-----ELQEMIDEADRDGDGEVSEQEFLRIM 141

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
           GK  E   + Y+  +++G G FGV +      ++   A K + +  + K         RE
Sbjct: 32  GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK--------NRE 82
Query: 77  IQIRRLLSGQPNIVELKSA------HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
           +QI R++   PN+V+LK+        +DE  +++V+E     +   R  ++ Y   +   
Sbjct: 83  LQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRA-SRHYAKLKQTM 138
Query: 131 PVL------RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           P+L        ++ ++   HS+G+ HRD+KP+N        + +LK+ DFGSA
Sbjct: 139 PMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T++  A K +  K + +    D M+  +I         PNIV+L
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
             A   E  + +++E C GG + D ++ +     +E     V +  ++A+N  H   ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLK  N  F    D   +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T++  A K +  K + +    D M+  +I         PNIV+L
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
             A   E  + +++E C GG + D ++ +     +E     V +  ++A+N  H   ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLK  N  F    D   +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T++  A K +  K + +    D M+  +I         PNIV+L
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
             A   E  + +++E C GG + D ++ +     +E     V +  ++A+N  H   ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
           RDLK  N  F    D   +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + Y+  +++G G FGV Y            C S       K  +      RE+QI R L 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85  GQPNIVELK------SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--- 135
              NIV L+         +DE  +++V++           +A+ Y   +   PV+     
Sbjct: 72  -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLY 127
Query: 136 ---IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV Y   +N+    +A K      K++  + D  I     REI I + L    N
Sbjct: 10  IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89  IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
           IV+L    H  +  V V          ++++C+GG   + + AK +         L  ++
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           N +  CH   V+HRDLKP+N   I+R+    LK+ DFG A  F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV Y   +N+    +A K      K++  + D  I     REI I + L    N
Sbjct: 10  IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89  IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
           IV+L    H  +  V V          ++++C+GG   + + AK +         L  ++
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           N +  CH   V+HRDLKP+N   I+R+    LK+ DFG A  F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
           +G G +GV Y   +N+    +A K      K++  + D  I     REI I + L    N
Sbjct: 10  IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89  IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
           IV+L    H  +  V V          ++++C+GG   + + AK +         L  ++
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           N +  CH   V+HRDLKP+N   I+R+    LK+ DFG A  F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 46  ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL--LSGQPNIVELKSAHEDETAVH 103
           + ST+ P +  S    P +K             IRR+   S +  + +L+ +   +  ++
Sbjct: 92  DESTDWPLSSPSPMDAPSVK-------------IRRMDPFSTKNTVGQLQPS-SPKVYLY 137
Query: 104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIVNAVNVCHSMGVMHRDLKPENFCF 160
           + M+LC+  +L D +  +    +R+    L     I  AV   HS G+MHRDLKP N  F
Sbjct: 138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI-F 196
Query: 161 ISRDDNALLKVTDFG 175
            + DD  ++KV DFG
Sbjct: 197 FTMDD--VVKVGDFG 209

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 8   SQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
           S R +   +G+  E   L     R+L  G F   Y   +  +   YA K +    +    
Sbjct: 11  SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---- 66
Query: 68  ENDMMIRREIQIRRLLSGQPNIVELKSA-----HEDETA---VHVVMELCQGG--DLFDR 117
           E +  I +E+   + LSG PNIV+  SA      E +T      ++ ELC+G   +   +
Sbjct: 67  EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK 126
Query: 118 IIAKGYYSERDAAPVLRAIVNAVNVCHSM--GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + ++G  S      +      AV   H     ++HRDLK EN       +   +K+ DFG
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFG 183
Query: 176 SA 177
           SA
Sbjct: 184 SA 185

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACK-SMAKKPKMKYAENDMMIRR 75
           +ED++L    G  +GRG FG  +   L  +N+     +C+ ++    K K+ +   ++++
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
                      PNIV L      +  +++VMEL QGGD    +  +G  +      +L+ 
Sbjct: 169 --------YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQM 218
Query: 136 IVNA---VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + +A   +    S   +HRDL   N C ++  +  +LK++DFG
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARN-CLVTEKN--VLKISDFG 258

>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound To The Iq Motif Of Nav1.2 Length = 73

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + L E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G I+Y EF 
Sbjct: 8   EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 284 AATIQR 289
              + +
Sbjct: 68  RMMVSK 73

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 20  YEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACK-SMAKKPKMKYAENDMMIRR 75
           +ED++L    G  +GRG FG  +   L  +N+     +C+ ++    K K+ +   ++++
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
                      PNIV L      +  +++VMEL QGGD    +  +G  +      +L+ 
Sbjct: 169 --------YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQM 218
Query: 136 IVNA---VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + +A   +    S   +HRDL   N C ++  +  +LK++DFG
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARN-CLVTEKN--VLKISDFG 258

>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           +P +E + ++E F   D D NG +S  EL   +  +G M  E +++ +++  DMDG+G +
Sbjct: 30  IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 278 DYTEFTA 284
           D+ EF  
Sbjct: 90  DFEEFVT 96

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL D + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKPEN      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPENLLI---NTEGAIKLADFGLARAF 153

>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF 
Sbjct: 2   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61

>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF 
Sbjct: 5   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64

>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF
Sbjct: 5   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK---SMAKKPKMKYAENDMMIRREIQIRRLL 83
           +  GR +G G FG  YL T   TN   A K      K P++ Y         E +I R+L
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY---------ESKIYRIL 59
Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            G   I  ++    +     +VM+L      DLF+    K   S +    +   ++N V 
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVE 117
Query: 142 VCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSA 177
             HS   +HRD+KP+NF   + R  N +  + DFG A
Sbjct: 118 FVHSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLA 153

>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF
Sbjct: 9   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67

>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF
Sbjct: 8   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66

>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF
Sbjct: 6   EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 31  RMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           R++G G FG   +C+          +P A K++    K+ Y E     RR+      + G
Sbjct: 28  RVIGAGEFG--EVCSGRLKLPGKRELPVAIKTL----KVGYTEKQ---RRDFLGEASIMG 78
Query: 86  Q---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAV 140
           Q   PNI+ L+        V +V E  + G L D  + K  G ++      +LR I   +
Sbjct: 79  QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 138 KYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 177

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM----IRREIQIRR 81
           +Y    ++GRG +G  YL  + +T    A K      K+     D++    I REI I  
Sbjct: 27  NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK------KVNRMFEDLIDCKRILREITILN 80
Query: 82  LLSGQPNIVELKSAHEDETA----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            L     I        D+      +++V+E+    DL        + +E     +L  ++
Sbjct: 81  RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRM 197
              N  H  G++HRDLKP N C +++D    +KV DFG A     E      DT+++  +
Sbjct: 140 LGENFIHESGIIHRDLKPAN-CLLNQD--CSVKVCDFGLARTINSEK-----DTNIVNDL 191
Query: 198 KQFRRMSKL-----KKLTVKVIVEYLPGEETQALKEKF 230
           ++            K+LT  V+  +    E   L+E +
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 229

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM-KYAENDMMIRREIQIR 80
           + + ++   + +GRG+F   Y        +P A K +     M   A  D +  +EI + 
Sbjct: 29  NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLL 86
Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLRA 135
           + L+  PN+++  ++  ++  +++V+EL   GDL  R+I      K    ER        
Sbjct: 87  KQLN-HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
           + +A+   HS  VMHRD+KP N  FI+     ++K+ D G    F  +   A
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAA 193

>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 145

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 156 ENFCFISRDDNALLKVTDFGSAL--LFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKV 213
           E F    +D++  + + + GSAL  L +       +     L  K+F  ++  K +  K 
Sbjct: 9   ECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFD-LATFKTVYRKP 67
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           I    P E+++ + + F  +D + NGT+   ELR  L  +G  LT  +V++LM+   + G
Sbjct: 68  I--KTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSG 125
Query: 274 NGAIDYTEF 282
           +GAI+Y  F
Sbjct: 126 DGAINYESF 134

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK--YAENDMMIRREIQIRRLLS 84
           YS    LG G FG  +   +   N     K + K+  ++  + E+  + +  ++I  L  
Sbjct: 26  YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 85  GQ-PNIVELKSAHEDETAVHVVMELCQGG-DLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
            +  NI+++    E++    +VME    G DLF  I       E  A+ + R +V+AV  
Sbjct: 86  VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
                ++HRD+K EN   I   ++  +K+ DFGSA   E
Sbjct: 146 LRLKDIIHRDIKDEN---IVIAEDFTIKLIDFGSAAYLE 181

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
           LG G +G  Y      T    A K +         E+D+  I +EI I +     P++V+
Sbjct: 37  LGEGSYGSVYKAIHKETGQIVAIKQVP-------VESDLQEIIKEISIMQQCDS-PHVVK 88
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
              ++   T + +VME C  G + D I +     +E + A +L++ +  +   H M  +H
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
           RD+K  N   ++ + +A  K+ DFG A
Sbjct: 149 RDIKAGNI-LLNTEGHA--KLADFGVA 172

>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant Length = 94

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           + ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF 
Sbjct: 29  EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y  G +LG G +G      ++ T    A K + KK   +    +  +++EIQ+ R L  +
Sbjct: 7   YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 87  PNIVELKSA--HEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRA------I 136
            N+++L     +E++  +++VME C  G  ++ D +  K +       PV +A      +
Sbjct: 67  -NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-------PVCQAHGYFCQL 118
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           ++ +   HS G++H+D+KP N    +      LK++  G A   E     A+DDT
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVA---EALHPFAADDT 167

>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q + E F   D + +G L Y EL+     +G  L + ++  L++  D +G     Y 
Sbjct: 20  EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYD 79
Query: 281 EFTAA----TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           +F        ++R  L+    + +AFQ FD D++G            +I+N+  +    A
Sbjct: 80  DFYIVXGEKILKRDPLDE---IKRAFQLFDDDHTG----------KISIKNLRRV----A 122
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
           K+ G   T +      L+  + + D+DG+G I+  EF+ + TD
Sbjct: 123 KELGETLTDE-----ELRAXIEEFDLDGDGEINENEFIAICTD 160

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y  GR +G G FG  YL T+ +     A K    K K         +  E +I +++ G 
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP------QLHIESKIYKMMQGG 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             I  ++    +     +VMEL      DLF+    K  +S +    +   +++ +   H
Sbjct: 65  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S   +HRD+KP+NF         L+ + DFG A
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 13  FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L+  F+ FDK+  G   F  + E  + +R      
Sbjct: 73  IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           T++                 ++ L+   D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y  GR +G G FG  YL T+ +     A K    K K         +  E +I +++ G 
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP------QLHIESKIYKMMQGG 62
Query: 87  PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             I  ++    +     +VMEL      DLF+    K  +S +    +   +++ +   H
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 120
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S   +HRD+KP+NF         L+ + DFG A
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKS--MAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G+F   Y   + +TN   A K   +  + + K   N   +R EI++ + LS  PNI+
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELS-HPNII 75
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMG 147
            L  A   ++ + +V +  +  DL   +I K      +       +   +  +   H   
Sbjct: 76  GLLDAFGHKSNISLVFDFMET-DL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++HRDLKP N      D+N +LK+ DFG A
Sbjct: 133 ILHRDLKPNNLLL---DENGVLKLADFGLA 159

>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 10  FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L+  F+ FDK+  G   F  + E  + +R      
Sbjct: 70  IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           T++                 ++ L+   D + +G IDF EF+ +M
Sbjct: 127 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 155

>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 13  FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L+  F+ FDK+  G   F  + E  + +R      
Sbjct: 73  IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           T++                 ++ L+   D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-------------- 71
            Y+    +G+G +GV  L    + N  YA K ++KK  ++ A                  
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 72  --------MIRREIQIRRLLSGQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAK 121
                    + +EI I + L   PN+V+L    +D  E  +++V EL   G + +    K
Sbjct: 74  IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 122 GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              SE  A    + ++  +   H   ++HRD+KP N   +  D +  +K+ DFG
Sbjct: 133 PL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL-LVGEDGH--IKIADFG 182

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           ++G G FG  Y        +  A K+    P    ++    +R+E ++  +L   PNI+ 
Sbjct: 14  IIGIGGFGKVYRAFWIGDEV--AVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIA 70
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS---MGV 148
           L+     E  + +VME  +GG L +R+++               I   +N  H    + +
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 149 MHRDLKPENFCFISRDDNA-----LLKVTDFGSA 177
           +HRDLK  N   + + +N      +LK+TDFG A
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSG 85
           Y     LG G FG    C ++     +    + K    +Y E     R EIQ+   L + 
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE---AARSEIQVLEHLNTT 71
Query: 86  QPN----IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER--DAAPVLRAIVNA 139
            PN     V++    E    + +V EL  G   +D I   G+   R      +   I  +
Sbjct: 72  DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 140 VNVCHSMGVMHRDLKPENFCF------------ISRDDNAL----LKVTDFGSA 177
           VN  HS  + H DLKPEN  F            I RD+  L    +KV DFGSA
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
           G+    V+  Y   + LG+G +G+ +   +  T    A K +      + + +     RE
Sbjct: 1   GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA--FQNSTDAQRTFRE 58
Query: 77  IQIRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           I I   LSG  NIV L +    +++  V++V +  +       +I            V+ 
Sbjct: 59  IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            ++  +   HS G++HRD+KP N      +    +KV DFG +  F
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF 159

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL D + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL D + A          P++++    ++  +  CHS  V
Sbjct: 70  LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSG 85
           Y     LG G FG    C ++     +    + K    +Y E     R EIQ+   L + 
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE---AARSEIQVLEHLNTT 71
Query: 86  QPN----IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER--DAAPVLRAIVNA 139
            PN     V++    E    + +V EL  G   +D I   G+   R      +   I  +
Sbjct: 72  DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 140 VNVCHSMGVMHRDLKPENFCF------------ISRDDNAL----LKVTDFGSA 177
           VN  HS  + H DLKPEN  F            I RD+  L    +KV DFGSA
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 22/157 (14%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI-QIRRLLS----GQP 87
           LGRG FG  +   +  T    A K                +R E+ ++  L++      P
Sbjct: 80  LGRGSFGEVHRMKDKQTGFQCAVKK---------------VRLEVFRVEELVACAGLSSP 124
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            IV L  A  +   V++ MEL +GG L   I   G   E  A   L   +  +   H+  
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 184
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           ++H D+K +N    S  D +   + DFG AL  + +G
Sbjct: 185 ILHGDVKADNVLLSS--DGSRAALCDFGHALCLQPDG 219

>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 4   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTA 284
           +++EF A
Sbjct: 64  EFSEFLA 70

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM----IRREIQIRR 81
           +Y    ++GRG +G  YL  + + N   A K      K+     D++    I REI I  
Sbjct: 29  NYEIKHLIGRGSYGYVYLAYDKNANKNVAIK------KVNRMFEDLIDCKRILREITILN 82
Query: 82  LLSGQPNIVELKSAHEDETAV-----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
            L     I+ L      E  +     ++V+E+    DL        + +E+    +L  +
Sbjct: 83  RLKSD-YIIRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNL 140
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +      H  G++HRDLKP N C +++D    +K+ DFG A
Sbjct: 141 LLGEKFIHESGIIHRDLKPAN-CLLNQD--CSVKICDFGLA 178

>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of Recombinant Human Calcyphosine Delineates A Novel Ef-hand-containing Protein Family Length = 204

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 204 SKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVK 263
           + ++KL  + +     G   Q L   F ++D D + +L  DE R GL K+G +L + + +
Sbjct: 19  ATMEKLRAQCLSRGASG--IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAE 76
Query: 264 QLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
            +    D +G+G +D  EF  A        R   ++ AF   D+   G
Sbjct: 77  GVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDG 124

>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 13  FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           ID+ EF    +++ K +      E L   F+ FDK+  G   F  + E  + +R      
Sbjct: 73  IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           T++                 ++ L+   D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           V +HY  GR +G G FGV +  T    N   A K   ++       +   +R E +  +L
Sbjct: 7   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKL 60
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L+G   I  +    ++     +V++L      DL D    K  +S +  A   + ++  V
Sbjct: 61  LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARV 118
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNA---LLKVTDFGSALLFEE 182
              H   +++RD+KP+NF  I R ++    ++ V DFG    + +
Sbjct: 119 QSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRD 162

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T    A K +  K + +    D ++  EI         P IV+L
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEILAT---CDHPYIVKL 81
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIA---KGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
             A+  +  + +++E C GG + D I+    +G  +E     V R ++ A+N  HS  ++
Sbjct: 82  LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRII 139
Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
           HRDLK  N       D   +++ DFG
Sbjct: 140 HRDLKAGNVLMTLEGD---IRLADFG 162

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           V +HY  GR +G G FGV +  T    N   A K   ++       +   +R E +  +L
Sbjct: 8   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKL 61
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L+G   I  +    ++     +V++L      DL D    K  +S +  A   + ++  V
Sbjct: 62  LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARV 119
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNA---LLKVTDFGSALLFEE 182
              H   +++RD+KP+NF  I R ++    ++ V DFG    + +
Sbjct: 120 QSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRD 163

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LG G FG  Y      T    A K +  K + +    D ++  EI         P IV+L
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEILAT---CDHPYIVKL 73
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIA---KGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
             A+  +  + +++E C GG + D I+    +G  +E     V R ++ A+N  HS  ++
Sbjct: 74  LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRII 131
Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
           HRDLK  N       D   +++ DFG
Sbjct: 132 HRDLKAGNVLMTLEGD---IRLADFG 154

>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain Of Akazara Scallop Troponin C In Complex With A Troponin I Fragment Length = 74

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + LKE F  +D +K G +  D LR  L  +G  LTE +++ ++   D DG+G +DY EF
Sbjct: 7   RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 69  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKPEN      +    +K+ DFG A  F
Sbjct: 126 LHRDLKPENLLI---NTEGAIKLADFGLARAF 154

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRLLSGQPN 88
           G +LG+G FG     T   T      + M  K  +++  E      +E+++ R L   PN
Sbjct: 15  GEVLGKGCFGQAIKVTHRETG-----EVMVMKELIRFDEETQRTFLKEVKVMRCLE-HPN 68
Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHS 145
           +++       +  ++ + E  +GG L  R I K     Y         + I + +   HS
Sbjct: 69  VLKFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           M ++HRDL   N C +  + N +  V DFG A L  +E
Sbjct: 127 MNIIHRDLNSHN-CLVRENKNVV--VADFGLARLMVDE 161

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 70  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKPEN      +    +K+ DFG A  F
Sbjct: 127 LHRDLKPENLLI---NTEGAIKLADFGLARAF 155

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG  Y   +N T    A K +      +  +    I++EI +       P I   
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKIIDL---EEAEDEIEDIQQEITVLSQCDS-PYITRY 82
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             ++   T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HRD
Sbjct: 83  FGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           +K  N     + D   +K+ DFG A
Sbjct: 142 IKAANVLLSEQGD---VKLADFGVA 163

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ----------GGDLFDRIIAKGYY 124
           REI + + L  + NIV L      +  + +V E C            GDL D  I K + 
Sbjct: 50  REICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSF- 106
Query: 125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
                   L  ++  +  CHS  V+HRDLKP+N   I+R  N  LK+ DFG A  F
Sbjct: 107 --------LFQLLKGLGFCHSRNVLHRDLKPQNL-LINR--NGELKLADFGLARAF 151

>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G 
Sbjct: 13  FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVS-HI 331
           ID+ EF    +++ K +      E L+  F+ FDK+  G   F  + E  + +R    H+
Sbjct: 73  IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
             +                  ++ L+   D + +G IDF EF+ +M
Sbjct: 130 IEED-----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 25  LHYSFGRM-LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRL 82
           +H++  ++ LGRG FG  +   +  T      +   KK +++ +   ++M    +     
Sbjct: 73  VHWATHQLRLGRGSFGEVHRMEDKQTGF----QCAVKKVRLEVFRAEELMACAGLT---- 124
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               P IV L  A  +   V++ MEL +GG L   +  +G   E  A   L   +  +  
Sbjct: 125 ---SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            HS  ++H D+K +N    S   +A L   DFG A+  + +G
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDG 221

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  ++ CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG  +   +N T    A K +      +  +    I++EI +       P + + 
Sbjct: 35  IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 90
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             ++  +T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HRD
Sbjct: 91  YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           +K  N       ++  +K+ DFG A
Sbjct: 150 IKAANVLL---SEHGEVKLADFGVA 171

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +     LG G FG         T    A K   ++   K  E   +   EIQI + L+  
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 72
Query: 87  PNIVELKSAHEDETAVH---------VVMELCQGGDL---FDRIIAKGYYSERDAAPVLR 134
           PN+V   SA E    +          + ME C+GGDL    ++        E     +L 
Sbjct: 73  PNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            I +A+   H   ++HRDLKPEN          + K+ D G A
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +     LG G FG         T    A K   ++   K  E   +   EIQI + L+  
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 71
Query: 87  PNIVELKSAHEDETAVH---------VVMELCQGGDL---FDRIIAKGYYSERDAAPVLR 134
           PN+V   SA E    +          + ME C+GGDL    ++        E     +L 
Sbjct: 72  PNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            I +A+   H   ++HRDLKPEN          + K+ D G A
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG  +   +N T    A K +      +  +    I++EI +       P + + 
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             ++  +T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HRD
Sbjct: 71  YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           +K  N       ++  +K+ DFG A
Sbjct: 130 IKAANVLL---SEHGEVKLADFGVA 151

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 25  LHYSFGRM-LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRL 82
           +H++  ++ LGRG FG  +   +  T      +   KK +++ +   ++M    +     
Sbjct: 92  VHWATHQLRLGRGSFGEVHRMEDKQTGF----QCAVKKVRLEVFRAEELMACAGLT---- 143
Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               P IV L  A  +   V++ MEL +GG L   +  +G   E  A   L   +  +  
Sbjct: 144 ---SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            HS  ++H D+K +N    S   +A L   DFG A+  + +G
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDG 240

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFD---RIIAKGYYS-----ERDAAPVLRAIV 137
            PNIV   ++   +  + +VM+L  GG + D    I+AKG +      E   A +LR ++
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALL 179
             +   H  G +HRD+K  N       ++  +++ DFG SA L
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFL 171

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG  +   +N T    A K +      +  +    I++EI +       P + + 
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             ++  +T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HRD
Sbjct: 71  YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           +K  N       ++  +K+ DFG A
Sbjct: 130 IKAANVLL---SEHGEVKLADFGVA 151

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 31  RMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           R++G G FG   +C+         ++  A K++    K+ Y E     RR+      + G
Sbjct: 49  RVIGAGEFG--EVCSGRLKLPGKRDVAVAIKTL----KVGYTEKQ---RRDFLCEASIMG 99
Query: 86  Q---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAV 140
           Q   PN+V L+        V +V+E  + G L D  + K  G ++      +LR I   +
Sbjct: 100 QFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                MG +HRDL   N   I  + N + KV+DFG + + E++
Sbjct: 159 RYLADMGYVHRDLAARN---ILVNSNLVCKVSDFGLSRVIEDD 198

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFD---RIIAKGYYS-----ERDAAPVLRAIV 137
            PNIV   ++   +  + +VM+L  GG + D    I+AKG +      E   A +LR ++
Sbjct: 67  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
             +   H  G +HRD+K  N       ++  +++ DFG +  F   GG+ +
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS-AFLATGGDIT 173

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKPEN      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPENLLI---NTEGAIKLADFGLARAF 156

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 69  LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKPEN      +    +K+ DFG A  F
Sbjct: 126 LHRDLKPENLLI---NTEGAIKLADFGLARAF 154

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G+G FG  +   +N T    A K +      +  +    I++EI +       P + + 
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCDS-PYVTKY 85
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
             ++  +T + ++ME   GG   D ++  G   E   A +LR I+  ++  HS   +HRD
Sbjct: 86  YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
           +K  N       ++  +K+ DFG A
Sbjct: 145 IKAANVLL---SEHGEVKLADFGVA 166

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y  GR +G G FG  YL    ++    A K    K K         +  E +  +++ G 
Sbjct: 11  YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP------QLHIESKFYKMMQGG 64
Query: 87  PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             I  +K    +     +VMEL      DLF+    K  +S +    +   +++ +   H
Sbjct: 65  VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S   +HRD+KP+NF         L+ + DFG A
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P IV L  A  +   V++ MEL +GG L   I   G   E  A   L   +  +   H+ 
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            ++H D+K +N    S    A L   DFG AL  + +G
Sbjct: 170 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDG 205

>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
            DG+G +D+ EF    ++  K +      E LS  F+ FDK+  GY +   +        
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                      K  L  T +    + +++L+  GD + +G ID+ EF+  M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI-QIRRLLS----GQP 87
           +GRG FG  +   +  T    A K                +R E+ ++  L++      P
Sbjct: 82  VGRGSFGEVHRMKDKQTGFQCAVKK---------------VRLEVFRVEELVACAGLSSP 126
Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            IV L  A  +   V++ MEL +GG L   I   G   E  A   L   +  +   H+  
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           ++H D+K +N    S    A L   DFG AL  + +G
Sbjct: 187 ILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDG 221

>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin C-Domain E104dE140D MUTANT Length = 72

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           + ++E F   D D NG +S  +LR  +T +G  LT+ +V +++  AD+DG+G ++Y +F
Sbjct: 7   EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65

>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
            DG+G +D+ EF    ++  K +      E LS  F+ +DK+  GY   DE + M+++  
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                               T +    + +++L+  GD + +G ID+ EF+  M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157

>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
            DG+G +D+ EF    ++  K +      E LS  F+ FDK+  GY   DE + M+++  
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                               T +    + +++L+  GD + +G ID+ E++  M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLER----SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
            DG+G +D+ EF    ++  K +      E LS  F+ FDK+  GY +   +        
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                      K  L  T +    + +++L+  GD + +G ID+ EF+  M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 74
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 75  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 132 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 160

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 69  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 40  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 95
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V  L  G DL+ +++   + S       L  I
Sbjct: 96  LRFRHENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQI 153
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 191

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEFLHQ-DLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 69  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 71
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 72  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 129 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 157

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 69  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 70  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 74
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 75  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 132 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 160

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 71
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 72  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 129 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 157

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 70  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 74  RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 193 V 193
           V
Sbjct: 189 V 189

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
           G+P+ DV   Y+  + +G G +G+     ++      A K ++      Y +  +   RE
Sbjct: 36  GQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL---RE 91
Query: 77  IQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP 131
           IQI  L     N++ ++     S  E    V++V +L +  DL+ +++     S      
Sbjct: 92  IQIL-LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICY 148
Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            L  I+  +   HS  V+HRDLKP N    +  D   LK+ DFG A + + E
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPE 197

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           ++    KE F   D+++ G ++ + L+  L + G  +      ++   AD  GNG I + 
Sbjct: 3   DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 281 EFTAATIQRQKLERSE-YLSKAFQYFDKDNSGY 312
           EF +   +R K   SE  L +AF+ FD + +GY
Sbjct: 63  EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGY 95

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 55  RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 113
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 114 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 193 V 193
           V
Sbjct: 170 V 170

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 123 YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA--LLF 180
           Y +E     +L  ++  V   HS G++HRDLKP N C +++D    +KV DFG A  + +
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN-CLVNQD--CSVKVCDFGLARTVDY 208
Query: 181 EEEGGEA------SDDTSVILRMKQFRRMSKLKK-LTVKVIVEYLPGEETQALKEKFIE 232
            E G          DD +++     F     LK+ LT  V+  +    E   L+E + E
Sbjct: 209 PENGNSQLPISPREDDMNLV----TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE 263

>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G +S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQ----RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
            DG+G +D+ EF    ++      K +  E LS  F+ FDK+  GY +   +        
Sbjct: 66  EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                      K  L  T +    + +++L+  GD + +G ID+ EF+  M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N   +   ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHN--VLIDHEHRKLRLIDWGLAEFYH 183

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG A + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDD 200

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 74  RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 193 V 193
           V
Sbjct: 189 V 189

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 144 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 182

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1 Length = 158

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 215 VEYLPGEETQALKEKFIEMDT-DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           V  L   + + L+  F + +T + +G +S D++   L  +G   T+  ++QL++  D  G
Sbjct: 4   VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 274 NGAIDY-------TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
           NG ID+         F    +  +++++   L +AF+ +DK+ +GY              
Sbjct: 64  NGDIDFDSFKIIGARFLGEEVNPEQMQQE--LREAFRLYDKEGNGY-------------- 107
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
               I TD  ++  L    +  +   L  ++ + D DG+G +DF EF+ +MT
Sbjct: 108 ----ISTDVMREI-LAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++  +   ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
           V
Sbjct: 217 V 217

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 86  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 142
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 143 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 181

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 93  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 149
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 150 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 188

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 58  RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 116
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 117 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 193 V 193
           V
Sbjct: 173 V 173

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ----------GGDLFDRIIAKGYY 124
           REI + + L  + NIV L      +  + +V E C            GDL D  I K + 
Sbjct: 50  REICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSF- 106
Query: 125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
                   L  ++  +  CHS  V+HRDLKP+N   I+R  N  LK+ +FG A  F
Sbjct: 107 --------LFQLLKGLGFCHSRNVLHRDLKPQNL-LINR--NGELKLANFGLARAF 151

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 144 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 182

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
           V
Sbjct: 217 V 217

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
           V
Sbjct: 217 V 217

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 22  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 78  LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLA 173

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74  RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           R EI  + +L      I+ L      +  +++VME C   DL   +  K      +    
Sbjct: 54  RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 112
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            + ++ AV+  H  G++H DLKP NF  +    + +LK+ DFG A   + +      D+ 
Sbjct: 113 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 193 V 193
           V
Sbjct: 169 V 169

>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQ 303
           G ID+ EF     ++ K  +  E + +AF+
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 39/170 (22%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA----KKPKMKYAENDMMIR 74
           P+E +      G ++G+GRFG  Y       +   A + +      + ++K  + ++M  
Sbjct: 31  PFEQL----EIGELIGKGRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL- 133
           R+ +         N+V    A      + ++  LC+G  L+  +        RDA  VL 
Sbjct: 84  RQTR-------HENVVLFMGACMSPPHLAIITSLCKGRTLYSVV--------RDAKIVLD 128
Query: 134 --------RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   + IV  +   H+ G++H+DLK +N  +    DN  + +TDFG
Sbjct: 129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFG 174

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNI+ L    +D  +    +V E     D F ++      ++ D    +  I+ A+
Sbjct: 88  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + CHSMG+MHRD+KP N       ++  L++ D+G A  + 
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT--AATI 287
           F ++D + +G++SY+E++A ++    +  E  ++ + +A D+DGNG ID  EFT  AA +
Sbjct: 6   FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 288 QRQKLERSEY-LSKAFQYFDKDNSG 311
           + Q L   +  L   ++  D D  G
Sbjct: 66  KEQDLSDEKVGLKILYKLMDADGDG 90

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 20  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 76  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLA 171

>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor Domain Of Centrin Length = 96

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+ Q ++E F   DTD +GT+   EL+  +  +G    + ++K+++   D DG+G I
Sbjct: 24  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 278 DYTEF 282
           D+ EF
Sbjct: 84  DFEEF 88

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 19  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 69
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 70  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 171

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEHVHQ-DLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes Octocarinatus Centrin Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+ Q +KE F   DT+K G++ Y EL+  +  +G  + + ++ +LM   D +GNG I
Sbjct: 1   LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 278 DYTEFTAATIQRQK 291
            + +F     ++ K
Sbjct: 61  GFDDFLDIMTEKIK 74

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 20  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 76  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 19  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 69
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 70  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 171

>pdb|1A75|B Chain B, Whiting Parvalbumin Length = 109

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT--KVGS-MLTEFDVKQLMEAADMDGN 274
           L G+    +K+ F+ +D DK+G +  DEL+  L   K G+  LT+ + K  ++A D DG+
Sbjct: 36  LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 275 GAIDYTEFTA 284
           GAI   E+ A
Sbjct: 96  GAIGVEEWVA 105

>pdb|1A75|A Chain A, Whiting Parvalbumin Length = 108

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT--KVGS-MLTEFDVKQLMEAADMDGN 274
           L G+    +K+ F+ +D DK+G +  DEL+  L   K G+  LT+ + K  ++A D DG+
Sbjct: 35  LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 275 GAIDYTEFTA 284
           GAI   E+ A
Sbjct: 95  GAIGVEEWVA 104

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQ 78
           V+  Y   + +G G  G+     +       A K +++    +   K A  ++++ + + 
Sbjct: 22  VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
            + ++ G  N+   + + E+   V++VMEL        ++I      ER +  +L  ++ 
Sbjct: 82  HKNII-GLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY-LLYQMLV 137
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            +   HS G++HRDLKP N    S   +A LK+ DFG A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLA 173

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 20  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 76  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 36  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 86
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 87  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 188

>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
            DG+G +D+ EF    ++  K +      E LS  F+  DK+  GY   DE + M+++  
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                               T +    + +++L+  GD + +G ID+ EF+  M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157

>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F I +   ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
            DG+G +D+ EF    ++  K +      E LS  F+ FDK+  GY   DE + M+++  
Sbjct: 66  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                               T +    + +++L+  GD + +G ID+ E +  M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
           G ID+ EF     ++ K
Sbjct: 61  GTIDFPEFLTMMARKMK 77

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 46  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 96
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 97  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 156 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 198

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 80  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 175

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A K +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 71  LDVIHTENKLYLVFEHVDQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG+G +G+ Y   + S  +  A K + ++   +Y++    +  EI + + L  + NIV+
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQP---LHEEIALHKHLKHK-NIVQ 69
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY---SERDAAPVLRAIVNAVNVCHSMGV 148
              +  +   + + ME   GG L   + +K      +E+      + I+  +   H   +
Sbjct: 70  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K +N    +   + +LK++DFG++
Sbjct: 130 VHRDIKGDNVLINTY--SGVLKISDFGTS 156

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL---REIKIL- 79
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 80  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 175

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 32  MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
           +LG+G +G+ Y   + S  +  A K + ++   +Y++    +  EI + + L  + NIV+
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQP---LHEEIALHKHLKHK-NIVQ 83
Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY---SERDAAPVLRAIVNAVNVCHSMGV 148
              +  +   + + ME   GG L   + +K      +E+      + I+  +   H   +
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +HRD+K +N    +   + +LK++DFG++
Sbjct: 144 VHRDIKGDNVLINTY--SGVLKISDFGTS 170

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           G  +G G FGV Y    N+T +  A K +A    +   E      +EI++      + N+
Sbjct: 30  GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 86
Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
           VEL     D   + +V      G L DR+      S  D  P L         +   N +
Sbjct: 87  VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           N  H    +HRD+K  N   I  D+    K++DFG A
Sbjct: 141 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 174

>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
           G ID+ EF
Sbjct: 61  GTIDFPEF 68

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           G  +G G FGV Y    N+T +  A K +A    +   E      +EI++      + N+
Sbjct: 36  GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
           VEL     D   + +V      G L DR+      S  D  P L         +   N +
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           N  H    +HRD+K  N   I  D+    K++DFG A
Sbjct: 147 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 180

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           G  +G G FGV Y    N+T +  A K +A    +   E      +EI++      + N+
Sbjct: 36  GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
           VEL     D   + +V      G L DR+      S  D  P L         +   N +
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           N  H    +HRD+K  N   I  D+    K++DFG A
Sbjct: 147 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 180

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52  PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
           P+  ++ AK+     A  ++++ + +  + ++ G  N+   + + E+   V++VMEL   
Sbjct: 60  PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
                ++I      ER +  +L  ++  +   HS G++HRDLKP N    S   +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
            DFG A
Sbjct: 168 LDFGLA 173

>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
           G ID+ EF
Sbjct: 61  GTIDFPEF 68

>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 275 GAIDYTEF 282
           G ID+ EF
Sbjct: 62  GTIDFPEF 69

>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
           G ID+ EF     ++ K
Sbjct: 61  GTIDFPEFLTMMARKMK 77

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           S  +++G G FG   +C+      +   +  A K++    K+ Y E     RR+      
Sbjct: 48  SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83  LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
           + GQ   PNI+ L+        V +V E  + G L D  + K    ++      +LR I 
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +     MG +HRDL   N      + N + KV+DFG   + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDD 200

>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
           G ID+ EF     ++ K
Sbjct: 61  GTIDFPEFLTMMARKMK 77

>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG
Sbjct: 2   DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 276 AIDYTEF 282
            ID+ EF
Sbjct: 62  TIDFPEF 68

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A   +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +G G +GV Y      T    A   +    + +   +  +  REI + + L+  PNIV+L
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93  KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
                 E  +++V E     DL   + A          P++++    ++  +  CHS  V
Sbjct: 67  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           +HRDLKP+N      +    +K+ DFG A  F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52  PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
           P+  ++ AK+     A  ++++ + +  + ++ G  N+   + + E+   V++VMEL   
Sbjct: 60  PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
                ++I      ER +  +L  ++  +   HS G++HRDLKP N    S   +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
            DFG A
Sbjct: 168 LDFGLA 173

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 22  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 78  LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 173

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 28  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 83
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 84  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 141
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 179

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 20  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 76  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 171

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSM-AKKPKMKYAENDMMIRR 75
           G+PY+D    Y   R LG G F   +L  +   N   A K +   K   + AE+++ + +
Sbjct: 13  GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 76  EIQ----IRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
            +      +    G  +I++L     H+    VHVVM     G+    +I K  Y  R  
Sbjct: 71  RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHR-G 127
Query: 130 APVL------RAIVNAVNVCHS-MGVMHRDLKPENFC--FISRDDNAL-LKVTDFGSALL 179
            P++      + ++  ++  H   G++H D+KPEN     +   +N + +K+ D G+A  
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 180 FEEE 183
           ++E 
Sbjct: 188 YDEH 191

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSM-AKKPKMKYAENDMMIRR 75
           G+PY+D    Y   R LG G F   +L  +   N   A K +   K   + AE+++ + +
Sbjct: 13  GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 76  EIQ----IRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
            +      +    G  +I++L     H+    VHVVM     G+    +I K  Y  R  
Sbjct: 71  RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHR-G 127
Query: 130 APVL------RAIVNAVNVCHS-MGVMHRDLKPENFC--FISRDDNAL-LKVTDFGSALL 179
            P++      + ++  ++  H   G++H D+KPEN     +   +N + +K+ D G+A  
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 180 FEEE 183
           ++E 
Sbjct: 188 YDEH 191

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 21/157 (13%)
Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           G   G G FGV Y    N+T +  A K +A    +   E      +EI++      + N+
Sbjct: 27  GNKXGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVXAKCQHE-NL 83
Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
           VEL     D   + +V      G L DR+      S  D  P L         +   N +
Sbjct: 84  VELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           N  H    +HRD+K  N   I  D+    K++DFG A
Sbjct: 138 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 171

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
           P+ D +  Y     +G+G FG  +      T    A K +         EN+     +  
Sbjct: 12  PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74  RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
            REI+I +LL  + N+V L           +  + ++++V + C+     L   ++ K  
Sbjct: 65  LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            SE     V++ ++N +   H   ++HRD+K  N   I+RD   +LK+ DFG A  F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 175

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52  PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
           P+  ++ AK+     A  ++++ + +  + ++ G  N+   + + E+   V++VMEL   
Sbjct: 60  PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
                ++I      ER +  +L  ++  +   HS G++HRDLKP N    S   +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
            DFG A
Sbjct: 168 LDFGLA 173

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 97  EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE 156
           ED + V++V  L  G DL + I+     S+     ++  ++  +   HS G++HRDLKP 
Sbjct: 103 EDFSEVYLVTTLM-GADL-NNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPS 160
Query: 157 NFCFISRDDNALLKVTDFGSALLFEEE 183
           N   ++ ++++ L++ DFG A   +EE
Sbjct: 161 N---VAVNEDSELRILDFGLARQADEE 184

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G  GV +  +   + +  A K   +  KP ++       I RE+Q+    +  P IV
Sbjct: 33  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 86
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
               A   +  + + ME   GG L D+++ K G   E+    V  A++  +        +
Sbjct: 87  GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           MHRD+KP N    SR +   +K+ DFG
Sbjct: 146 MHRDVKPSNILVNSRGE---IKLCDFG 169

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 20  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 76  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 171

>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = 72

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFDVKQLMEAADMDGNGAIDYTE 281
            + L++ F E DT+ +G +S  ELR  + K+ G  +   D+++++   D++G+G +D+ E
Sbjct: 6   VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 282 FT 283
           F 
Sbjct: 66  FV 67

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 22  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 78  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 173

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA---- 130
           RE+Q+ R     PN++      +D    ++ +ELC           + Y  ++D A    
Sbjct: 66  REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-------TLQEYVEQKDFAHLGL 118
Query: 131 -PV--LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK--VTDFG 175
            P+  L+   + +   HS+ ++HRDLKP N      + +  +K  ++DFG
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG 168

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 25  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 80
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 81  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 138
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 176

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 26  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 81
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 82  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 139
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 177

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 17  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 72
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 73  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 130
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 168

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 80  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 18  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 73
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 74  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 131
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 169

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 80  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 25  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 80
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 81  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 138
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 176

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 83  LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 139
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 178

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 18  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 73
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 74  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 131
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 169

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +  +   REI+I  
Sbjct: 40  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 95
Query: 82  LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           L     NI+ +       T      V++V +L +  DL+ +++   + S       L  I
Sbjct: 96  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 153
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  +   HS  V+HRDLKP N    +  D   LK+ DFG A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 191

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
           P+ D +  Y     +G+G FG  +      T    A K +         EN+     +  
Sbjct: 12  PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74  RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
            REI+I +LL  + N+V L           +  + ++++V + C+     L   ++ K  
Sbjct: 65  LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            SE     V++ ++N +   H   ++HRD+K  N   I+RD   +LK+ DFG A  F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRD--GVLKLADFGLARAF 175

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 83  LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 139
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 178

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G  GV +  +   + +  A K   +  KP ++       I RE+Q+    +  P IV
Sbjct: 17  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 70
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
               A   +  + + ME   GG L D+++ K G   E+    V  A++  +        +
Sbjct: 71  GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEEGGE 186
           MHRD+KP N    SR +   +K+ DFG S  L +E   E
Sbjct: 130 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANE 165

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
            + L  E+    KE F   D D +G ++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
           G ID+ EF
Sbjct: 61  GTIDFPEF 68

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33  LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G  GV +  +   + +  A K   +  KP ++       I RE+Q+    +  P IV
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 94
Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
               A   +  + + ME   GG L D+++ K G   E+    V  A++  +        +
Sbjct: 95  GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           MHRD+KP N    SR +   +K+ DFG
Sbjct: 154 MHRDVKPSNILVNSRGE---IKLCDFG 177

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
           G  N+   + + E+   V++VMEL        ++I      ER +  +L  ++  +   H
Sbjct: 87  GLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S G++HRDLKP N    S   +A LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DATLKILDFGLA 173

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 84  LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 140
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 179

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 103 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 159
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 160 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 198

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
           P+ D +  Y     +G+G FG  +      T    A K +         EN+     +  
Sbjct: 12  PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74  RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
            REI+I +LL  + N+V L           +  + ++++V + C+     L   ++ K  
Sbjct: 65  LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            SE     V++ ++N +   H   ++HRD+K  N   I+RD   +LK+ DFG A  F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 175

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
           P+ D +  Y     +G+G FG  +      T    A K +         EN+     +  
Sbjct: 11  PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 63
Query: 74  RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
            REI+I +LL  + N+V L           +  + ++++V + C+     L   ++ K  
Sbjct: 64  LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 122
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            SE     V++ ++N +   H   ++HRD+K  N   I+RD   +LK+ DFG A  F
Sbjct: 123 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 174

>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In Complex With The Green Tea Polyphenol; (-)- Epigallocatechin-3-Gallate Length = 72

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
           G+  + L + F   D + +G +  DEL+  L   G  +TE D+++LM+  D + +G IDY
Sbjct: 2   GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 280 TEF 282
            EF
Sbjct: 62  DEF 64

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83  LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           L G PNIV+L     D+ +    ++ E     D     +     ++ D    +  ++ A+
Sbjct: 82  LMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
           + CHS G+MHRD+KP N       D+ L  L++ D+G A  + 
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177

>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
           ++ L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGN
Sbjct: 1   MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
           G ID+ EF
Sbjct: 61  GTIDFPEF 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	436
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-77
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-75
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-74
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-74
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-74
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-74
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-74
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-74
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-73
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-46
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-20
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-73
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-73
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-72
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-72
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-72
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-11
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-72
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-71
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-70
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-70
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-70
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-47
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-20
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-70
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-70
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-46
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-69
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-46
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-20
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-69
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-69
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-68
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-68
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-67
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-67
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-65
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-64
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-64
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-63
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-61
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	3e-56
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	1e-23
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	4e-53
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	7e-19
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	4e-49
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	1e-25
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	5e-24
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	4e-49
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	9e-22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-47
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	2e-47
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	2e-24
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-46
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	2e-44
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	1e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-43
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-43
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-43
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	5e-43
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-40
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-40
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-40
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-40
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	1e-39
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	8e-20
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-39
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-39
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-38
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-38
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-38
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-38
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-38
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-38
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-37
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-37
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	2e-36
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-36
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-36
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-36
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-36
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-35
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-35
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-34
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-34
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	3e-34
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	2e-14
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	3e-34
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-33
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-33
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	2e-33
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	2e-18
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	6e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-33
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-33
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-32
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-32
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-32
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-32
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-31
3fwb_A	161	Cell division control protein 31; gene gating, com	3e-31
3fwb_A	161	Cell division control protein 31; gene gating, com	4e-15
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-30
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	3e-05
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-30
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	3e-16
1y1x_A	191	Leishmania major homolog of programmed cell death	3e-30
1y1x_A	191	Leishmania major homolog of programmed cell death	2e-12
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-29
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	1e-29
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	4e-16
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	2e-29
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	1e-13
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	3e-29
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	7e-16
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	3e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-29
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	4e-29
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	3e-17
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	7e-12
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	8e-29
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	6e-14
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	5e-11
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	4e-28
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	3e-12
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	5e-28
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	3e-16
2jnf_A	158	Troponin C; stretch activated muscle contraction,	6e-28
2jnf_A	158	Troponin C; stretch activated muscle contraction,	1e-13
2jnf_A	158	Troponin C; stretch activated muscle contraction,	1e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-27
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	6e-27
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	1e-15
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	6e-27
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	3e-14
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	6e-27
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	1e-16
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-27
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	1e-26
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	1e-13
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	2e-25
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	6e-08
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	5e-25
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	2e-08
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	5e-25
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	8e-10
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-05
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-24
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-09
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	8e-07
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	1e-24
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	6e-09
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	2e-06
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	3e-24
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	3e-16
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	3e-06
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	4e-24
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	5e-17
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-08
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	6e-24
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	1e-18
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-23
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-23
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-10
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-23
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	6e-23
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	4e-19
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	4e-09
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-22
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	2e-22
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	6e-12
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	3e-22
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-18
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	6e-10
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	2e-21
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	3e-12
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	4e-21
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	6e-05
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	7e-21
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	3e-06
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	1e-20
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	4e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-20
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	2e-20
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	2e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-20
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-20
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	4e-20
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	2e-11
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	4e-20
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-12
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	4e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-20
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	5e-20
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	3e-17
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	8e-20
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	6e-12
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	5e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-19
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-19
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-19
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	6e-12
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	3e-07
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-19
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	2e-19
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	3e-13
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	1e-07
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	2e-19
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	2e-13
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	5e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-19
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-19
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-19
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-19
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-04
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-19
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-13
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	2e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-19
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-19
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-19
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	7e-19
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	1e-10
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	7e-19
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	2e-14
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	2e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-19
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-18
3li6_A	66	Calcium-binding protein; calcium signaling protein	1e-18
3li6_A	66	Calcium-binding protein; calcium signaling protein	4e-10
3li6_A	66	Calcium-binding protein; calcium signaling protein	3e-08
3li6_A	66	Calcium-binding protein; calcium signaling protein	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-18
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-18
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	2e-18
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	3e-13
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	6e-11
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	4e-18
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-10
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	7e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-18
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	7e-18
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	3e-10
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	1e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-18
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-17
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	9e-09
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	1e-17
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	3e-12
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	5e-07
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	1e-17
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	2e-06
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	3e-04
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	3e-04
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	2e-17
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	4e-05
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	2e-04
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	2e-17
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	4e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-17
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-17
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	4e-17
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	2e-05
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	5e-17
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	4e-14
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	6e-17
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	9e-10
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-17
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-17
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	7e-17
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	4e-09
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	8e-17
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	1e-13
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	5e-11
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	8e-17
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	6e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-17
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-17
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	1e-16
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	5e-12
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	2e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-16
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	1e-16
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	1e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-16
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-16
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-16
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	3e-16
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	4e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-16
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-16
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	8e-16
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	1e-15
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	3e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-15
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-15
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	1e-15
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	9e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-15
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-15
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-15
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-15
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	5e-15
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	4e-09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-15
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	8e-15
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	2e-07
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	1e-05
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	1e-14
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	5e-06
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	3e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-14
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-14
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-14
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	4e-14
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	6e-14
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	2e-08
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	7e-14
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	2e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-13
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	1e-13
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	3e-10
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	2e-13
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	2e-11
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	4e-08
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	2e-13
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	3e-13
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	2e-12
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	6e-10
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	1e-08
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	3e-13
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	2e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-13
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	1e-12
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	5e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-12
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-12
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	4e-08
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	2e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-12
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-12
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-12
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	3e-12
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	5e-07
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	6e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-12
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-12
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	9e-12
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	6e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-12
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-11
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	2e-11
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	3e-07
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	6e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-11
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-11
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-11
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-11
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	6e-11
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	3e-08
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	2e-06
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	8e-11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	8e-11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	4e-08
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	2e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	9e-11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-10
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	1e-10
1c07_A	95	Protein (epidermal growth factor receptor pathway	2e-10
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	3e-10
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-09
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-07
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-10
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-10
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-10
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	8e-10
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	6e-08
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	9e-10
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	3e-06
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	2e-05
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	1e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-09
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	1e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-09
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	7e-09
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	1e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-08
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-08
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-08
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	7e-08
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	1e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-07
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-07
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-07
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	3e-07
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	4e-06
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	8e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-07
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	7e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-06
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	1e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-06
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	2e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	6e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-05
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	6e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-04
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	2e-04

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  243 bits (622), Expect = 3e-77
 Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 7/179 (3%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           + S    Y I G   + +   +     LGRG   + Y C +  T  PYA K + K    K
Sbjct: 34  TASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK 93

Query: 66  YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYS 125
                 ++R EI +   LS  PNI++LK   E  T + +V+EL  GG+LFDRI+ KGYYS
Sbjct: 94  ------IVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS 146

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           ERDAA  ++ I+ AV   H  G++HRDLKPEN  + +   +A LK+ DFG + + E + 
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  234 bits (600), Expect = 5e-75
 Identities = 59/166 (35%), Positives = 97/166 (58%), Gaps = 5/166 (3%)

Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
           G    D+  +Y+    +GRG +G   +  +  T +  A K + K   ++  +     ++E
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVD---RFKQE 56

Query: 77  IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           I+I + L   PNI+ L    ED T +++VMELC GG+LF+R++ K  + E DAA +++ +
Sbjct: 57  IEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           ++AV  CH + V HRDLKPENF F++   ++ LK+ DFG A  F+ 
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  237 bits (606), Expect = 1e-74
 Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 3/178 (1%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
            +   +    +         +Y     LG+G F V   C   +T + +A K +  K K+ 
Sbjct: 10  GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLS 68

Query: 66  YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYS 125
             +    + RE +I R L   PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YS
Sbjct: 69  ARDFQK-LEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 126

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           E DA+  ++ I+ ++  CHS G++HR+LKPEN    S+   A +K+ DFG A+   + 
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 7/76 (9%), Positives = 17/76 (22%), Gaps = 7/76 (9%)

Query: 183 EGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG 239
                +        +  +K+F    KLK   +  ++          L    +        
Sbjct: 290 NRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQGPP 346

Query: 240 TLSYDELRAGLTKVGS 255
           +    E       +  
Sbjct: 347 STIK-ESSESSQTIDD 361

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  234 bits (599), Expect = 1e-74
 Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 3/163 (1%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
                +Y     LG+G F V   C   +T + +A K +  K K+  A +   + RE +I 
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLS-ARDFQKLEREARIC 59

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R L   PNIV L  + ++E+  ++V +L  GG+LF+ I+A+ +YSE DA+  ++ I+ ++
Sbjct: 60  RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             CHS G++HR+LKPEN    S+   A +K+ DFG A+   + 
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  236 bits (603), Expect = 2e-74
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 8/183 (4%)

Query: 14  PILGKPYEDVML--HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK-KPKMKYAEND 70
            IL    +DV+    Y    ++G+G F V   C    T   +A K +   K       + 
Sbjct: 11  GILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70

Query: 71  MMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSE 126
             ++RE  I  +L   P+IVEL   +  +  +++V E   G DL   I+ +      YSE
Sbjct: 71  EDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129

Query: 127 RDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
             A+  +R I+ A+  CH   ++HRD+KP      S++++A +K+  FG A+   E G  
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189

Query: 187 ASD 189
           A  
Sbjct: 190 AGG 192

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 7/57 (12%), Positives = 18/57 (31%), Gaps = 3/57 (5%)

Query: 183 EGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD 236
           E    +        + ++++F    KLK   +  +  +          E+  +   D
Sbjct: 292 ERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  236 bits (604), Expect = 2e-74
 Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 9/168 (5%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-----MIRR 75
           ++    Y    ++GRG   V   C   +T   +A K M      + +   +       RR
Sbjct: 90  KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT-AERLSPEQLEEVREATRR 148

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           E  I R ++G P+I+ L  ++E  + + +V +L + G+LFD +  K   SE++   ++R+
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           ++ AV+  H+  ++HRDLKPEN      DDN  ++++DFG +   E  
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPG 253

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  233 bits (597), Expect = 5e-74
 Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 5/167 (2%)

Query: 26  HYSFGR-MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
            Y     +LG G       C    T+  YA K + K+P          + RE+++     
Sbjct: 13  VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLYQCQ 68

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
           G  N++EL    E+E   ++V E  +GG +   I  + +++E +A+ V++ + +A++  H
Sbjct: 69  GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
           + G+ HRDLKPEN      +  + +K+ DF      +  G  +   T
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  232 bits (594), Expect = 6e-74
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y+   MLG+G FG    C +  T   YA K + K    K  +    I RE+++ + L  
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTST-ILREVELLKKLD- 79

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNI++L    ED ++ ++V EL  GG+LFD II +  +SE DAA +++ + + +   H 
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             ++HRDLKPEN    S++ +  +K+ DFG +  F++ 
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  236 bits (604), Expect = 4e-73
 Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 2/182 (1%)

Query: 2   GCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK 61
           G  +          +          Y   R+LG+G FG   LC +  T    A K ++K+
Sbjct: 3   GSMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 62

Query: 62  PKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK 121
            ++K   +   + RE+Q+ + L   PNI++L    ED+   ++V E+  GG+LFD II++
Sbjct: 63  -QVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 120

Query: 122 GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
             +SE DAA ++R +++ +   H   ++HRDLKPEN    S+  +A +++ DFG +  FE
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180

Query: 182 EE 183
             
Sbjct: 181 AS 182

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  166 bits (422), Expect = 1e-46
 Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 42/215 (19%)

Query: 181 EEEGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTD 236
             +   + D     + IL ++QF+   KL +  +  +   L   +ET+ L   F +MD +
Sbjct: 288 YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKN 347

Query: 237 KNGTLSYDELRAGLTKV-----------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
            +G L   EL  G  ++            +   E +V Q+++A D D NG I+Y+EF   
Sbjct: 348 GDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV 407

Query: 286 TIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLG 342
            + R+ L   E L +AF+ FD DNSG     E   +                    FG+ 
Sbjct: 408 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI--------------------FGVS 447

Query: 343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +       ++L     + D + +G +DF EF  ++
Sbjct: 448 DVDSETWKSVLS----EVDKNNDGEVDFDEFQQML 478

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 93.2 bits (232), Expect = 1e-20
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 15/146 (10%)

Query: 293 ERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           + ++ L+  F   DK+  G     E        +  + +  +    A        +    
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELI------EGYKELMRMKGQDASMLDASAVEH--- 382

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
              + +++   D D NG I++ EFV +  D   L + E LE+AF+  D ++   I+  EL
Sbjct: 383 --EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 440

Query: 410 ETAFKENNMGDDATIKEIISEVGRDH 435
            T F  +++ D  T K ++SEV +++
Sbjct: 441 ATIFGVSDV-DSETWKSVLSEVDKNN 465

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  230 bits (588), Expect = 6e-73
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-----MIRR 75
                +Y    +LGRG   V   C    T   YA K +       ++  ++        +
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           E+ I R +SG PNI++LK  +E  T   +V +L + G+LFD +  K   SE++   ++RA
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           ++  +   H + ++HRDLKPEN      DD+  +K+TDFG +   +  
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPG 177

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  231 bits (590), Expect = 7e-73
 Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 7/163 (4%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
               + LG G F +   C    +N  +A K ++K+ +          ++EI   +L  G 
Sbjct: 13  DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA-------NTQKEITALKLCEGH 65

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           PNIV+L     D+    +VMEL  GG+LF+RI  K ++SE +A+ ++R +V+AV+  H +
Sbjct: 66  PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           GV+HRDLKPEN  F   +DN  +K+ DFG A L   +      
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  229 bits (587), Expect = 1e-72
 Identities = 53/163 (32%), Positives = 94/163 (57%), Gaps = 5/163 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            ++   + F  +LG G F   +L  +  T   +A K + K P       D  +  EI + 
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVL 60

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           + +    NIV L+  +E  T  ++VM+L  GG+LFDRI+ +G Y+E+DA+ V++ +++AV
Sbjct: 61  KKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              H  G++HRDLKPEN  +++ ++N+ + +TDFG + + +  
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  230 bits (589), Expect = 2e-72
 Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 9/171 (5%)

Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           L +        Y     +G G + V   C   +TNM +A K + K               
Sbjct: 13  LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--------RDPTE 64

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           EI+I       PNI+ LK  ++D   V+VV EL +GG+L D+I+ + ++SER+A+ VL  
Sbjct: 65  EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
           I   V   H+ GV+HRDLKP N  ++    N   +++ DFG A     E G
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  233 bits (596), Expect = 3e-72
 Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 3/164 (1%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
                 Y     LG+G F V   C +      YA   +  K       +   + RE +I 
Sbjct: 7   TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR--DHQKLEREARIC 64

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           RLL   PNIV L  +  +E   +++ +L  GG+LF+ I+A+ YYSE DA+  ++ I+ AV
Sbjct: 65  RLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             CH MGV+HR+LKPEN    S+   A +K+ DFG A+  E E 
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  106 bits (266), Expect = 3e-25
 Identities = 22/200 (11%), Positives = 46/200 (23%), Gaps = 44/200 (22%)

Query: 183 EGGEASD---DTSVILRMKQFRRMSKLKK--LTVKVIVEYLPGEETQALKEKFIEMDTDK 237
                +        +  +K+F    KLK   LTV +        + + +K     ++   
Sbjct: 273 HRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAIS 332

Query: 238 NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI-QRQKLERSE 296
           NG   ++                 +      A  +    +D+  F    +  R       
Sbjct: 333 NGD--FESYTKMCDP--------GMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHT 382

Query: 297 YLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
            +     +   D S           +                    G+  T Q       
Sbjct: 383 TILNPHIHLMGDESACIAYIRITQYL-----------------DAGGIPRTAQ------- 418

Query: 354 KKLVLQGDIDGNGNIDFIEF 373
                +     +G    + F
Sbjct: 419 -SEETRVWHRRDGKWQIVHF 437

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 13/154 (8%), Positives = 36/154 (23%), Gaps = 36/154 (23%)

Query: 285 ATIQRQKLERSEYLSKAFQYFDKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN 343
              +   + + E +    Q  +  ++G ++ +  M +   T                   
Sbjct: 308 LATRNFSVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMT------------------- 348

Query: 344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL-MTDIYKLETPELLEKAFQYLDKNSDQ 402
                          +   +    +DF  F    +           +     +L  +   
Sbjct: 349 -----------AFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESA 397

Query: 403 FITVNELETAFKENNMGDDATIKEIISEVGRDHK 436
            I    +        +    T +   + V   H+
Sbjct: 398 CIAYIRITQYLDAGGIPR--TAQSEETRV--WHR 427

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  228 bits (584), Expect = 5e-72
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 5/171 (2%)

Query: 15  ILGKPYEDVMLHYSF-GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI 73
           +  +  E+    Y    + LGRG+F V   C   ST   YA K + K+ + +  +    I
Sbjct: 18  LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ--DCRAEI 75

Query: 74  RREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAP 131
             EI +  L    P ++ L   +E+ + + +++E   GG++F   + +     SE D   
Sbjct: 76  LHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR 135

Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +++ I+  V   H   ++H DLKP+N    S      +K+ DFG +     
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  224 bits (574), Expect = 5e-71
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM---MIRREIQ 78
            V  HY  G  LG G+F +   C +  T   YA K + K+ ++  +   +    I RE+ 
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKR-RLSSSRRGVSREEIEREVN 60

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I R +   PNI+ L    E++T V +++EL  GG+LFD +  K   +E +A   L+ I++
Sbjct: 61  ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSALLFEE 182
            V+  HS  + H DLKPEN   + ++  N  +K+ DFG A   E 
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  225 bits (576), Expect = 1e-70
 Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQ 78
           E+V  +Y  G  LG G+F V   C E ST + YA K + K+     +   +   I RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+N
Sbjct: 67  ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSALLFEE 182
            V   HS+ + H DLKPEN   + R+     +K+ DFG A   + 
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 8/50 (16%), Positives = 13/50 (26%), Gaps = 3/50 (6%)

Query: 189 DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN 238
           D    + R      M K KK   +             L + F     + +
Sbjct: 279 DTQQALSRKASAVNMEKFKKFAARKKSNNG---SGGGLNDIFEAQKIEWH 325

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  224 bits (572), Expect = 1e-70
 Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 8/166 (4%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
             +   + F R LG G FG  +L  E S+ +    K++ K    +       I  EI++ 
Sbjct: 18  GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD---RSQVPMEQIEAEIEVL 74

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAI 136
           + L   PNI+++    ED   +++VME C+GG+L +RI++        SE   A +++ +
Sbjct: 75  KSLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +NA+   HS  V+H+DLKPEN  F     ++ +K+ DFG A LF+ 
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  230 bits (588), Expect = 1e-70
 Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 4   CVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPK 63
                Q      +      +   Y   + LG G +G   LC +  T++  A K + K   
Sbjct: 16  FQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT-S 74

Query: 64  MKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY 123
           +  + N   +  E+ + +LL   PNI++L    ED+   ++VME  +GG+LFD II +  
Sbjct: 75  VSTSSNSK-LLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK 132

Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           ++E DAA +++ +++ V   H   ++HRDLKPEN    S++ +AL+K+ DFG + +FE +
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  167 bits (425), Expect = 5e-47
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 36/209 (17%)

Query: 181 EEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNG 239
           +E G E     + I  M++F+   KL +  +  +   L   EET+ L + F  +D + +G
Sbjct: 302 KESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDG 361

Query: 240 TLSYDELRAGLTKVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK 291
            L   EL  G +K+             E +V  ++ AAD D NG IDY+EF    + R+ 
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421

Query: 292 LERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR 348
           L   + L  AFQ FD+D +G    DE  ++                    FGL + +   
Sbjct: 422 LLSKDKLESAFQKFDQDGNGKISVDELASV--------------------FGLDHLES-- 459

Query: 349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                K+++   D + +G++DF EF  ++
Sbjct: 460 --KTWKEMISGIDSNNDGDVDFEEFCKMI 486

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 91.3 bits (227), Expect = 5e-20
 Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 18/146 (12%)

Query: 293 ERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           E ++ L+  F++ DK+  G     E                    K     +      + 
Sbjct: 343 EETKELTDIFRHIDKNGDGQLDRQELID--------------GYSKLSGEEVAVFDLPQI 388

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
            + +  ++   D D NG ID+ EFV +  D   L + + LE AFQ  D++ +  I+V+EL
Sbjct: 389 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 448

Query: 410 ETAFKENNMGDDATIKEIISEVGRDH 435
            + F  +++ +  T KE+IS +  ++
Sbjct: 449 ASVFGLDHL-ESKTWKEMISGIDSNN 473

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  223 bits (571), Expect = 2e-70
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 15/166 (9%)

Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
           K    +  +    ++LG G  G         T   +A K +   PK          RRE+
Sbjct: 11  KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK---------ARREV 61

Query: 78  QIRRLLSGQPNIVELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAP 131
           ++    S  P+IV +   +E+  A    + +VME   GG+LF RI  +G   ++ER+A+ 
Sbjct: 62  ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121

Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++++I  A+   HS+ + HRD+KPEN  + S+  NA+LK+TDFG A
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  228 bits (583), Expect = 5e-70
 Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 3/163 (1%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
                 Y+   MLG+G FG    C +  T   YA K + K    K  +    I RE+++ 
Sbjct: 18  GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTST-ILREVELL 75

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           + L   PNI++L    ED ++ ++V EL  GG+LFD II +  +SE DAA +++ + + +
Sbjct: 76  KKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              H   ++HRDLKPEN    S++ +  +K+ DFG +  F++ 
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  165 bits (419), Expect = 4e-46
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 43/219 (19%)

Query: 180 FEEEGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDT 235
           +  E    SD     S +  ++QF+   KL +  +  +   L   +ET+ L E F ++DT
Sbjct: 283 YSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDT 342

Query: 236 DKNGTLSYDELRAGLTKV--------------GSMLTEFDVKQLMEAADMDGNGAIDYTE 281
           + +G L  DEL  G  +                    E  +  LM   DMDG+G+I+Y+E
Sbjct: 343 NNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSE 402

Query: 282 FTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKK 338
           F A+ I R  L   E + +AF+ FDKD SG     E   +                    
Sbjct: 403 FIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKL-------------------- 442

Query: 339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                      M  L+ ++ Q D + +G +DF EFV ++
Sbjct: 443 --FSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  228 bits (583), Expect = 1e-69
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 10/188 (5%)

Query: 5   VSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--- 61
                      + K    +   Y   R LG G +G   LC E + +   A K + K    
Sbjct: 16  FQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFD 75

Query: 62  ------PKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLF 115
                       +    I  EI + + L   PNI++L    ED+   ++V E  +GG+LF
Sbjct: 76  KGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELF 134

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           ++II +  + E DAA +++ I++ +   H   ++HRD+KPEN    +++    +K+ DFG
Sbjct: 135 EQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194

Query: 176 SALLFEEE 183
            +  F ++
Sbjct: 195 LSSFFSKD 202

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  165 bits (420), Expect = 4e-46
 Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 36/200 (18%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRA 248
               +  M++F    KL +  +  I   L   EE + L + F ++D + +G L   EL  
Sbjct: 320 LCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIE 379

Query: 249 GLTKVGSM--------LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSK 300
           G   + +           E +V  +++  D D NG I+Y+EF +  + +Q L   E L +
Sbjct: 380 GYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRR 439

Query: 301 AFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
           AF  FD D SG    +E   +                    FGL +  +    ++L    
Sbjct: 440 AFNLFDTDKSGKITKEELANL--------------------FGLTSISEKTWNDVLG--- 476

Query: 358 LQGDIDGNGNIDFIEFVNLM 377
            + D + +  IDF EFV++M
Sbjct: 477 -EADQNKDNMIDFDEFVSMM 495

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 90.9 bits (226), Expect = 6e-20
 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 18/151 (11%)

Query: 288 QRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
           +   LE  + L+  F+  DK+  G     E              + +   K +   L N 
Sbjct: 347 KLTTLEERKELTDIFKKLDKNGDGQLDKKELIE---------GYNVLRNFKNELGELKNV 397

Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI 404
           ++      +  ++ + D D NG I++ EF+++  D   L + E L +AF   D +    I
Sbjct: 398 EE-----EVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKI 452

Query: 405 TVNELETAFKENNMGDDATIKEIISEVGRDH 435
           T  EL   F   ++  + T  +++ E  ++ 
Sbjct: 453 TKEELANLFGLTSI-SEKTWNDVLGEADQNK 482

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  220 bits (564), Expect = 5e-69
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 4/165 (2%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND--MMIRREIQ 78
           + V   Y  G  LG G+F +   C E ST + YA K + K+             I RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I R +    N++ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++
Sbjct: 68  ILRQVLH-HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSALLFEE 182
            VN  H+  + H DLKPEN   + ++     +K+ DFG A   E+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  223 bits (570), Expect = 6e-69
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 15/186 (8%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
                 +  +  K    +  +    ++LG G  G         T   +A K +   PK  
Sbjct: 43  FPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-- 100

Query: 66  YAENDMMIRREIQIRRLLSGQPNIVELKSAHED----ETAVHVVMELCQGGDLFDRIIAK 121
                   RRE+++    S  P+IV +   +E+       + +VME   GG+LF RI  +
Sbjct: 101 -------ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR 153

Query: 122 G--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
           G   ++ER+A+ ++++I  A+   HS+ + HRD+KPEN  + S+  NA+LK+TDFG A  
Sbjct: 154 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213

Query: 180 FEEEGG 185
                 
Sbjct: 214 TTSHNS 219

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  218 bits (558), Expect = 4e-68
 Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           +++   Y     LGRG FG+ + C E S+   Y  K +  K   +     +++++EI I 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-----VLVKKEISIL 55

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNA 139
            +     NI+ L  + E    + ++ E   G D+F+RI    +  +ER+    +  +  A
Sbjct: 56  NIA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEA 114

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           +   HS  + H D++PEN  + +R  +  +K+ +FG A   +  
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPG 157

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  219 bits (560), Expect = 6e-68
 Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 4/165 (2%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQ 78
           + V   Y  G  LG G+F +   C E ST + YA K + K+     +       I RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I R +   PNI+ L   +E+ T V +++EL  GG+LFD +  K   SE +A   ++ I++
Sbjct: 68  ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSALLFEE 182
            VN  H+  + H DLKPEN   + ++     +K+ DFG A   E+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  217 bits (554), Expect = 2e-67
 Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 6/167 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK----PKMKYAENDMMIRRE 76
           + +   Y   + LG G  G   L  E  T    A K ++K+       + A+  + +  E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 77  IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           I+I + L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         +
Sbjct: 66  IEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + AV   H  G++HRDLKPEN    S++++ L+K+TDFG + +  E 
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  216 bits (553), Expect = 3e-67
 Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 21  EDVMLHYSFGR-MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI 79
             V   Y   + +LG G  G    C    T    A K +   PK          R+E+  
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---------ARQEVDH 74

Query: 80  RRLLSGQPNIVELKSAHED----ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVL 133
               SG P+IV +   +E+    +  + ++ME  +GG+LF RI  +G   ++ER+AA ++
Sbjct: 75  HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           R I  A+   HS  + HRD+KPEN  + S++ +A+LK+TDFG A    + 
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  213 bits (544), Expect = 6e-65
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 6/167 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRRE 76
           + +   Y   + LG G  G   L  E  T    A + ++K+       + A+  + +  E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 77  IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
           I+I + L+  P I+++K+  + E   ++V+EL +GG+LFD+++      E         +
Sbjct: 191 IEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + AV   H  G++HRDLKPEN    S++++ L+K+TDFG + +  E 
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  210 bits (536), Expect = 4e-64
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 7/164 (4%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
             V  +Y     LG G FGV + C E +T   +  K +          +   ++ EI I 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP----LDKYTVKNEISIM 102

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNA 139
             L   P ++ L  A ED+  + +++E   GG+LFDRI A+ Y  SE +    +R     
Sbjct: 103 NQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           +   H   ++H D+KPEN    ++  ++ +K+ DFG A     +
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPD 204

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  209 bits (535), Expect = 4e-64
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 9/175 (5%)

Query: 11  QRYPILGKPYEDVMLHYSFGRM--LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE 68
             + I+      V   Y+  +   LG GRFG  + C E +T +  A K +  +      +
Sbjct: 73  FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM----K 128

Query: 69  NDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSER 127
           +   ++ EI +   L    N+++L  A E +  + +VME   GG+LFDRII + Y  +E 
Sbjct: 129 DKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187

Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           D    ++ I   +   H M ++H DLKPEN   ++RD    +K+ DFG A  ++ 
Sbjct: 188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQ-IKIIDFGLARRYKP 241

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  212 bits (542), Expect = 4e-63
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 7/163 (4%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           + V+ HY     LG G FGV +  TE +T   +A K +    +     +   +R+EIQ  
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE----SDKETVRKEIQTM 208

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNA 139
            +L   P +V L  A ED+  + ++ E   GG+LF+++  +    SE +A   +R +   
Sbjct: 209 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +   H    +H DLKPEN  F ++  N  LK+ DFG     + 
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDP 309

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  202 bits (516), Expect = 1e-61
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 43/217 (19%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
             S R+     G    ++   Y     +G+G +GV  +  EN T    A K M K    +
Sbjct: 7   HSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66

Query: 66  YAENDM-MIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-- 122
               D+  I+ E+++ + L   PNI  L   +EDE  + +VMELC GG L D++      
Sbjct: 67  INPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125

Query: 123 --------------------------------------YYSERDAAPVLRAIVNAVNVCH 144
                                                    E+  + ++R I +A++  H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           + G+ HRD+KPENF F S + +  +K+ DFG +  F 
Sbjct: 186 NQGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFY 221

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score =  183 bits (467), Expect = 3e-56
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 26/203 (12%)

Query: 182 EEGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN 238
           E           ++++  +K F++ ++LKK+ + +I ++L   E   L+  FI +D D +
Sbjct: 12  ENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNS 71

Query: 239 GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL 298
           GTLS  E+  GL K+G      D+ Q++   D + +G I YT+F AATI +Q   + E  
Sbjct: 72  GTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVC 131

Query: 299 SKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
              F++FD D +G    +E + +        ++ +   DKA                +  
Sbjct: 132 LIPFKFFDIDGNGKISVEELKRIFGR----DDIENPLIDKA----------------IDS 171

Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
           L+ + D++G+G IDF EF+ +M+
Sbjct: 172 LLQEVDLNGDGEIDFHEFMLMMS 194

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 96.5 bits (241), Expect = 1e-23
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 30/145 (20%)

Query: 298 LSKAFQYFDKDNSG---YDEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
           L   F   D DNSG     E    +                  KK G            +
Sbjct: 59  LRNIFIALDVDNSGTLSSQEILDGL------------------KKIGYQKIPP-----DI 95

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
            +++   D + +G I + +F+    D       E+    F++ D + +  I+V EL+  F
Sbjct: 96  HQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIF 155

Query: 414 KENNMGD---DATIKEIISEVGRDH 435
             +++ +   D  I  ++ EV  + 
Sbjct: 156 GRDDIENPLIDKAIDSLLQEVDLNG 180

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score =  175 bits (446), Expect = 4e-53
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 25/201 (12%)

Query: 183 EGGEASD---DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG 239
             G  +       V+   K +  + K +KL + +I +     + + LK  F+ +D D  G
Sbjct: 8   SSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKG 67

Query: 240 TLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
            ++ ++L+ GL K G  L   +   L++  D DG+G IDYTEF AA + R++L + + + 
Sbjct: 68  YITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIY 125

Query: 300 KAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
            AF+ FD DN G     E   +                             R +N +K++
Sbjct: 126 CAFRVFDVDNDGEITTAELAHI-----------------LYNGNKKGNITQRDVNRVKRM 168

Query: 357 VLQGDIDGNGNIDFIEFVNLM 377
           +   D + +G IDF EF  +M
Sbjct: 169 IRDVDKNNDGKIDFHEFSEMM 189

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 83.1 bits (206), Expect = 7e-19
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 33/147 (22%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L   F   D+D  G    ++ +  +                 +K GL             
Sbjct: 54  LKSTFLVLDEDGKGYITKEQLKKGL-----------------EKDGLKLPYN------FD 90

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK 414
            L+ Q D DG+G ID+ EF+    D  +L   +L+  AF+  D ++D  IT  EL     
Sbjct: 91  LLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDGEITTAELAHILY 149

Query: 415 ENNMG------DDATIKEIISEVGRDH 435
             N        D   +K +I +V +++
Sbjct: 150 NGNKKGNITQRDVNRVKRMIRDVDKNN 176

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  169 bits (429), Expect = 4e-49
 Identities = 39/251 (15%), Positives = 82/251 (32%), Gaps = 45/251 (17%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG 249
            + +          ++L+          L  E+T  L++ F+      +G  S+ +L+  
Sbjct: 93  ASLLKDLEDDASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQV 147

Query: 250 LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDN 309
           L K    + E  +K+L    + D  G + Y    A       L         F+  D ++
Sbjct: 148 LAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALV------ADFRKIDTNS 201

Query: 310 SGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG 366
           +G     EFR                     + G        A+          D D + 
Sbjct: 202 NGTLSRKEFREH-----------------FVRLGFDKKSVQDAL------FRYADEDESD 238

Query: 367 NIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD--DATI 424
           ++ F E+V+L   +        L   + + D +    ++  E++   ++ ++ +      
Sbjct: 239 DVGFSEYVHLGLCLLV------LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKF 292

Query: 425 KEIISEVGRDH 435
           +   S V  D 
Sbjct: 293 EHQFSVVDVDD 303

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  105 bits (264), Expect = 1e-25
 Identities = 32/249 (12%), Positives = 67/249 (26%), Gaps = 42/249 (16%)

Query: 193 VILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           +  ++       K  +  ++  +     ++ Q  K K  E D          E      +
Sbjct: 24  LQKKLDHTSFAHKEDRDRLEAQIA----QKEQEQKAKLAEYDQKVQNEFDARERAERERE 79

Query: 253 VG---SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDN 309
                +   +  +  L++  + D +G            +         L + F       
Sbjct: 80  AARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNI----LRQLFLSSAVSG 135

Query: 310 SG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG 366
           SG   + + +                        L           LKKL +  + D  G
Sbjct: 136 SGKFSFQDLKQ----------------------VLAKYADTIPEGPLKKLFVMVENDTKG 173

Query: 367 NIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKE 426
            + +I  V +  D+        L   F+ +D NS+  ++  E    F        +    
Sbjct: 174 RMSYITLVAVANDLAA------LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDA 227

Query: 427 IISEVGRDH 435
           +      D 
Sbjct: 228 LFRYADEDE 236

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  101 bits (252), Expect = 5e-24
 Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 31/167 (18%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            +  AL   F ++DT+ NGTLS  E R    ++G          L   AD D +  + ++
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS-VQDALFRYADEDESDDVGFS 243

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAK 337
           E+    +    L         + + D D SG    +E + +                  +
Sbjct: 244 EYVHLGLCLLVLR------ILYAFADFDKSGQLSKEEVQKV-----------------LE 280

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLE 384
              +  + + +  +         D+D + ++ + EFV L+  ++  +
Sbjct: 281 DAHIPESARKKFEHQFS----VVDVDDSKSLSYQEFVMLVLLMFHDD 323

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score =  163 bits (416), Expect = 4e-49
 Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 27/184 (14%)

Query: 198 KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML 257
           KQF  M+K KK+ ++VI E L  EE   LKE F  +D DK+G ++++EL+AGL +VG+ L
Sbjct: 1   KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60

Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DE 314
            E ++  LM+AAD+D +G IDY EF AAT+   K+ER ++L  AF YFDKD SGY   DE
Sbjct: 61  KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120

Query: 315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
            +                    ++FG+ + +       +++L+   D D +G ID+ EFV
Sbjct: 121 LQQA-----------------CEEFGVEDVR-------IEELMRDVDQDNDGRIDYNEFV 156

Query: 375 NLMT 378
            +M 
Sbjct: 157 AMMQ 160

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 90.7 bits (226), Expect = 9e-22
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 28/142 (19%)

Query: 298 LSKAFQYFDKDNSG---YDEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
           L + F   D D SG   ++E +  +                  K+ G    +       +
Sbjct: 29  LKEMFNMIDADKSGQITFEELKAGL------------------KRVGANLKES-----EI 65

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
             L+   D+D +G ID+ EF+     + K+E  + L  AF Y DK+   +IT +EL+ A 
Sbjct: 66  LDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQAC 125

Query: 414 KENNMGDDATIKEIISEVGRDH 435
           +E  + D   I+E++ +V +D+
Sbjct: 126 EEFGVEDV-RIEELMRDVDQDN 146

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  164 bits (417), Expect = 2e-47
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG+G     +      T   +A K         +     +  RE ++ + L+  
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI---SFLRPVDVQMREFEVLKKLN-H 66

Query: 87  PNIVELKSAHEDETAVHV--VMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVN 141
            NIV+L +  E+ T  H   +ME C  G L+  +          E +   VLR +V  +N
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 142 VCHSMGVMHRDLKPENF-CFISRDDNALLKVTDFGSALLFEEE 183
                G++HR++KP N    I  D  ++ K+TDFG+A   E++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score =  160 bits (406), Expect = 2e-47
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 39/204 (19%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRA 248
            T  +  MK+F+   KL +  +  +   L   EET+ L + F ++D + +G L   EL  
Sbjct: 5   LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIE 64

Query: 249 GLTKV-----------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEY 297
           G  K+            S   E +V  ++++ D D NG I+Y+EF    + +Q L   E 
Sbjct: 65  GYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER 124

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L  AFQ FD D SG    +E   +                      + +           
Sbjct: 125 LLAAFQQFDSDGSGKITNEELGRL-----------------FGVTEVDD-------ETWH 160

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMT 378
           +++ + D + +G +DF EFV +M 
Sbjct: 161 QVLQECDKNNDGEVDFEEFVEMMQ 184

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 98.9 bits (247), Expect = 2e-24
 Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 15/141 (10%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L++ F+  D +  G     E        +  R +     D          +       + 
Sbjct: 42  LTQIFRQLDNNGDGQLDRKELI------EGYRKLMQWKGDTVSDLDSSQIEA-----EVD 90

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK 414
            ++   D D NG I++ EFV +  D   L + E L  AFQ  D +    IT  EL   F 
Sbjct: 91  HILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150

Query: 415 ENNMGDDATIKEIISEVGRDH 435
              + D+ T  +++ E  +++
Sbjct: 151 VTEVDDE-TWHQVLQECDKNN 170

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  163 bits (414), Expect = 3e-46
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG+G     +      T   +A K         +     +  RE ++ + L+  
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI---SFLRPVDVQMREFEVLKKLN-H 66

Query: 87  PNIVELKSAHEDETAVHV--VMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVN 141
            NIV+L +  E+ T  H   +ME C  G L+  +          E +   VLR +V  +N
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 142 VCHSMGVMHRDLKPENF-CFISRDDNALLKVTDFGSALLFEE 182
                G++HR++KP N    I  D  ++ K+TDFG+A   E+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score =  152 bits (385), Expect = 2e-44
 Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 40/201 (19%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPG--EETQALKEKFIEMDTDKNGTLSYDELR 247
             +V+  MK + + S ++ + + ++   L       + + E F ++DT+ NG+LS+ E+ 
Sbjct: 3   SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIY 62

Query: 248 AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDK 307
             L  VG  + ++D+ ++++A D++  G I YTEF A   + + +E   +L  AF   DK
Sbjct: 63  TVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDK 119

Query: 308 DNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDG 364
           D  GY    +  ++V                     L N       N +    L      
Sbjct: 120 DEDGYISKSDIVSLV-----------------HDKVLDN-------NDIDNFFLSVHSIK 155

Query: 365 NGN--------IDFIEFVNLM 377
            G         I F EF + M
Sbjct: 156 KGIPREHIINKISFQEFKDYM 176

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 29/143 (20%)

Query: 296 EYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           +Y+++ F   D +++G   + E   ++ S                   +G  K       
Sbjct: 39  KYINELFYKLDTNHNGSLSHREIYTVLAS-------------------VGIKKW-----D 74

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           + +++   DI+  GNI + EF+        +E+   L+ AF  +DK+ D +I+ +++ + 
Sbjct: 75  INRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIVSL 133

Query: 413 FKENNMGDDATIKEIISEVGRDH 435
             +  + D+  I      V    
Sbjct: 134 VHDKVL-DNNDIDNFFLSVHSIK 155

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  156 bits (396), Expect = 2e-43
 Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 12/173 (6%)

Query: 25  LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + +    +LG G  G T +      N   A K +         E      RE+Q+ R   
Sbjct: 24  ISFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILP-------ECFSFADREVQLLRESD 75

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVC 143
             PN++      +D    ++ +ELC    L + +  K + +   +   +L+   + +   
Sbjct: 76  EHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKV--TDFGSALLFEEEGGEASDDTSVI 194
           HS+ ++HRDLKP N      + +  +K   +DFG            S  + V 
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  152 bits (386), Expect = 3e-43
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 5/160 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  GR LG+G F   +  ++  T   +A K + K   +        +  EI I R L+ 
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQREKMSMEISIHRSLA- 73

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
             ++V      ED   V VV+ELC+   L +    +   +E +A   LR IV      H 
Sbjct: 74  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
             V+HRDLK  N  F++ D    +K+ DFG A   E +G 
Sbjct: 134 NRVIHRDLKLGNL-FLNEDLE--VKIGDFGLATKVEYDGE 170

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  153 bits (389), Expect = 3e-43
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 5/159 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  GR LG+G F   +  ++  T   +A K + K   +        +  EI I R L+ 
Sbjct: 42  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQREKMSMEISIHRSLA- 99

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
             ++V      ED   V VV+ELC+   L +    +   +E +A   LR IV      H 
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             V+HRDLK  N  F++ D    +K+ DFG A   E +G
Sbjct: 160 NRVIHRDLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 195

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score =  148 bits (376), Expect = 5e-43
 Identities = 75/205 (36%), Positives = 100/205 (48%), Gaps = 35/205 (17%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+D +G
Sbjct: 2   ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61

Query: 276 AIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIY 332
            IDY EF AAT+   KLER E L  AF YFDKD SGY   DE +                
Sbjct: 62  TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA-------------- 107

Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK--------LE 384
               K FGL +         +  ++ + D D +G ID+ EF  +M             + 
Sbjct: 108 ---CKDFGLDDIH-------IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMR 157

Query: 385 TPELLEKAFQYLDKNSDQFITVNEL 409
               L  A   +D  S+Q I     
Sbjct: 158 KTLNLRDALGLVDNGSNQVIEGYFK 182

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 90.0 bits (224), Expect = 3e-21
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 26/140 (18%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L + F+  D DNSG   +DE +  +                 K+ G    +       +K
Sbjct: 12  LKELFKMIDTDNSGTITFDELKDGL-----------------KRVGSELMES-----EIK 49

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK 414
            L+   DID +G ID+ EF+     + KLE  E L  AF Y DK+   +IT++E++ A K
Sbjct: 50  DLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACK 109

Query: 415 ENNMGDDATIKEIISEVGRD 434
           +  + D   I ++I E+ +D
Sbjct: 110 DFGLDDI-HIDDMIKEIDQD 128

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  145 bits (367), Expect = 1e-40
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN- 63

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
             N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           +G+ HRD+KPEN      D+   LK++DFG A +F     E   +  
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKM 167

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  148 bits (375), Expect = 3e-40
 Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 26/180 (14%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           + +       ++LG G  G       +    P A K M         +   +   EI++ 
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLI-------DFCDIALMEIKLL 62

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYS-------ERDAAPVL 133
                 PN++    +   +  +++ +ELC   +L D + +K           E +   +L
Sbjct: 63  TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRD----------DNALLKVTDFGSALLFEEE 183
           R I + V   HS+ ++HRDLKP+N    +            +N  + ++DFG     +  
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  151 bits (382), Expect = 4e-40
 Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 13/167 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     LG G FG         T    A K   ++   K  E       EIQI + L+ 
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER---WCLEIQIMKKLN- 70

Query: 86  QPNIVELKSAHEDETAVH------VVMELCQGGDLFDRIIAKG---YYSERDAAPVLRAI 136
            PN+V  +   +    +       + ME C+GGDL   +          E     +L  I
Sbjct: 71  HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            +A+   H   ++HRDLKPEN          + K+ D G A   ++ 
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  143 bits (363), Expect = 6e-40
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLL 83
            +  G +LG+G F   Y      T +  A K + KK      +  M+  ++ E++I   L
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK---AMYKAGMVQRVQNEVKIHCQL 68

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNV 142
              P+I+EL +  ED   V++V+E+C  G++   +  +   +SE +A   +  I+  +  
Sbjct: 69  K-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
            HS G++HRDL   N   ++R+ N  +K+ DFG A   +    
Sbjct: 128 LHSHGILHRDLTLSNL-LLTRNMN--IKIADFGLATQLKMPHE 167

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score =  140 bits (354), Expect = 1e-39
 Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 18/197 (9%)

Query: 185 GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD 244
           G                 M KL+   +            Q L   F ++D D + +L  D
Sbjct: 3   GLVPRGPLGSHMDAVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSLDAD 57

Query: 245 ELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQY 304
           E R GL K+G +L + + + +    D +G+G +D  EF  A        R   ++ AF  
Sbjct: 58  EFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAK 117

Query: 305 FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI-D 363
            D+   G         +   +R V         + G     +     +L++ +   D  +
Sbjct: 118 LDRSGDGV-------VTVDDLRGVYSGRAHPKVRSGEWTEDE-----VLRRFLDNFDSSE 165

Query: 364 GNGNIDFIEFVNLMTDI 380
            +G +   EF +  + +
Sbjct: 166 KDGQVTLAEFQDYYSGV 182

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 86.2 bits (214), Expect = 8e-20
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 37/160 (23%)

Query: 287 IQRQKLERSEY----LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           ++ Q L R       L++ F+  D+D S     DEFR  +                  K 
Sbjct: 24  LRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGL-----------------AKL 66

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKN 399
           GL   +        + +  + D +G+G +D  EF+  +          ++  AF  LD++
Sbjct: 67  GLVLDQA-----EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRS 121

Query: 400 SDQFITVNELETAFKENN--------MGDDATIKEIISEV 431
            D  +TV++L   +              +D  ++  +   
Sbjct: 122 GDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNF 161

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  143 bits (363), Expect = 2e-39
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN- 63

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
             N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           +G+ HRD+KPEN      D+   LK++DFG A +F     E   +  
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKM 167

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  142 bits (359), Expect = 5e-39
 Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 8/172 (4%)

Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IR 74
           GK  E +   Y  G +LG G FG  Y     S N+P A K + K     + E      + 
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94

Query: 75  REIQIRRLLS-GQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
            E+ + + +S G   ++ L    E   +  +++E  +   DLFD I  +G   E  A   
Sbjct: 95  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154

Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL-LKVTDFGSALLFEEE 183
              ++ AV  CH+ GV+HRD+K EN   I  D N   LK+ DFGS  L ++ 
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDEN---ILIDLNRGELKLIDFGSGALLKDT 203

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  140 bits (356), Expect = 1e-38
 Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 8/178 (4%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           +       P  GK  E     Y  G +LG+G FG  +     +  +  A K + +   + 
Sbjct: 12  APPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLG 71

Query: 66  YA--ENDMMIRREIQIRRLLSGQ---PNIVELKSAHEDETAVHVVMEL-CQGGDLFDRII 119
           ++   + +    E+ +   +      P ++ L    E +    +V+E      DLFD I 
Sbjct: 72  WSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT 131

Query: 120 AKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            KG   E  +      +V A+  CHS GV+HRD+K EN   I        K+ DFGS 
Sbjct: 132 EKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENI-LIDLRRGC-AKLIDFGSG 187

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  140 bits (355), Expect = 1e-38
 Identities = 41/190 (21%), Positives = 69/190 (36%), Gaps = 18/190 (9%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
                Q   + G+ Y          + +G G     +    N     YA K +  +   +
Sbjct: 16  ENLYFQSMSVKGRIYS-------ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE---E 64

Query: 66  YAENDM-MIRREIQIRRLLSGQ-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY 123
                +   R EI     L      I+ L      +  +++VME C   DL   +  K  
Sbjct: 65  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 123

Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
               +     + ++ AV+  H  G++H DLKP NF       + +LK+ DFG A   + +
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPD 179

Query: 184 GGEASDDTSV 193
                 D+ V
Sbjct: 180 TTSVVKDSQV 189

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  139 bits (353), Expect = 2e-38
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           +  GR LG+G+FG  YL  E  +    A K + K    +  +  +   +RRE++I+  L 
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA---QLEKAGVEHQLRREVEIQSHLR 67

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CH
Sbjct: 68  -HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           S  V+HRD+KPEN   +       LK+ DFG
Sbjct: 127 SKRVIHRDIKPEN---LLLGSAGELKIADFG 154

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  139 bits (351), Expect = 5e-38
 Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 23/189 (12%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    +LG+G FG          +  YA K +    +         I  E+ +   L+  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-----STILSEVMLLASLN-H 61

Query: 87  PNIVELKSAHEDETAVHV-------------VMELCQGGDLFDRIIAKGYYSERD-AAPV 132
             +V   +A  +                    ME C+ G L+D I ++    +RD    +
Sbjct: 62  QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121

Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            R I+ A++  HS G++HRDLKP N  FI    N  +K+ DFG A            D+ 
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNI-FIDESRN--VKIGDFGLAKNVHRSLDILKLDSQ 178

Query: 193 VILRMKQFR 201
            +       
Sbjct: 179 NLPGSSDNL 187

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  138 bits (349), Expect = 6e-38
 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 5/159 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  G  LG G FG   +     T    A K + ++ K++  +    I+REIQ  +L   
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFR- 69

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       T   +VME   GG+LFD I   G   E +A  + + I++AV+ CH 
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             V+HRDLKPEN      D +   K+ DFG + +  +  
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 165

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  138 bits (349), Expect = 7e-38
 Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 9/151 (5%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
           +  GR LG+G+FG  YL  E       A K + K    +  +  +   +RREI+I+  L 
Sbjct: 16  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS---QLEKEGVEHQLRREIEIQSHLR 72

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNI+ + +   D   +++++E    G+L+  +   G + E+ +A  +  + +A++ CH
Sbjct: 73  -HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              V+HRD+KPEN   +       LK+ DFG
Sbjct: 132 ERKVIHRDIKPEN---LLMGYKGELKIADFG 159

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  137 bits (348), Expect = 3e-37
 Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLS 84
            YS  + +G G     +    N     YA K +  +   +     +   R EI     L 
Sbjct: 10  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE---EADNQTLDSYRNEIAYLNKLQ 65

Query: 85  GQ-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
                I+ L      +  +++VME C   DL   +  K      +     + ++ AV+  
Sbjct: 66  QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 124

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           H  G++H DLKP NF       + +LK+ DFG A   + +      D+ V
Sbjct: 125 HQHGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPDTTSVVKDSQV 170

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  137 bits (347), Expect = 9e-37
 Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 18/190 (9%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           S S  +   + G+ Y          + +G G     +    N     YA K +  +   +
Sbjct: 44  SSSANECISVKGRIYS-------ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE---E 92

Query: 66  YAENDM-MIRREIQIRRLLSGQ-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY 123
                +   R EI     L      I+ L      +  +++VME C   DL   +  K  
Sbjct: 93  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 151

Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
               +     + ++ AV+  H  G++H DLKP NF       + +LK+ DFG A   + +
Sbjct: 152 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPD 207

Query: 184 GGEASDDTSV 193
                 D+ V
Sbjct: 208 TTSVVKDSQV 217

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score =  132 bits (334), Expect = 2e-36
 Identities = 33/227 (14%), Positives = 66/227 (29%), Gaps = 45/227 (19%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG 249
             S +     ++    ++      ++  +P ++   + + F+ +D D++GTL  +EL  G
Sbjct: 17  QGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMG 76

Query: 250 LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDN 309
               G  L+     ++M   D D NG I + EF A     +           F    +  
Sbjct: 77  QFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAY------NLFVMNARAR 130

Query: 310 SGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG 366
           SG     E    +                 ++ G      F        L+ +    G  
Sbjct: 131 SGTLEPHEILPAL-----------------QQLG------FYINQRTSLLLHRLFARGMA 167

Query: 367 NIDFIEFVNL------MTDIYKLETPELLEKAFQYLDKNSDQFITVN 407
             D   ++ +          Y+                    F  + 
Sbjct: 168 FCDLNCWIAICAFAAQTRSAYQ-------MIFMNPYYGPMKPFNPME 207

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  135 bits (343), Expect = 2e-36
 Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 7/150 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y F + +G G FGV  L  +  T    A K + +   +   EN   ++REI   R L  
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--EN---VQREIINHRSLR- 74

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNIV  K      T + ++ME   GG+L++RI   G +SE +A    + +++ V+ CHS
Sbjct: 75  HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           M + HRDLK EN   +       LK+ DFG
Sbjct: 135 MQICHRDLKLENT-LLDGSPAPRLKICDFG 163

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  134 bits (340), Expect = 3e-36
 Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQIRR 81
            YS    LG G FG  +   +   N     K + K    +           +  EI I  
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 82  LLSGQPNIVELKSAHEDETAVHVVMEL-CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
            +    NI+++    E++    +VME    G DLF  I       E  A+ + R +V+AV
Sbjct: 85  RVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
                  ++HRD+K EN       ++  +K+ DFGSA   E   
Sbjct: 144 GYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGK 184

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  133 bits (338), Expect = 7e-36
 Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
           +Y   + +G+G F    L     T    A K +    K +     +  + RE++I ++L+
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKII---DKTQLNPTSLQKLFREVRIMKILN 72

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             PNIV+L    E E  ++++ME   GG++FD ++A G   E++A    R IV+AV  CH
Sbjct: 73  -HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
              ++HRDLK EN   +  D +  +K+ DFG +  F   G
Sbjct: 132 QKRIVHRDLKAEN---LLLDADMNIKIADFGFSNEFTVGG 168

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  135 bits (341), Expect = 2e-35
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  G  LG G FG   +     T    A K + ++ K++  +    IRREIQ  +L   
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ-KIRSLDVVGKIRREIQNLKLFR- 74

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       + + +VME   GG+LFD I   G   E+++  + + I++ V+ CH 
Sbjct: 75  HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             V+HRDLKPEN      D +   K+ DFG + +  +  
Sbjct: 135 HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 170

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  130 bits (330), Expect = 4e-35
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 29/184 (15%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA------------------ 67
            Y+    +G+G +GV  L    + N  YA K ++KK  ++ A                  
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 68  --ENDMM--IRREIQIRRLLSGQPNIVELKSAHEDETAVHV--VMELCQGGDLFDRIIAK 121
                 +  + +EI I + L   PN+V+L    +D    H+  V EL   G + + +   
Sbjct: 74  IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTL 131

Query: 122 GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
              SE  A    + ++  +   H   ++HRD+KP N   +  D +  +K+ DFG +  F+
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN-LLVGEDGH--IKIADFGVSNEFK 188

Query: 182 EEGG 185
               
Sbjct: 189 GSDA 192

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  130 bits (328), Expect = 1e-34
 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY F + LG G F    L         YA K +    +    E     +RE  + RL   
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE----AQREADMHRLF-N 84

Query: 86  QPNIVELKSAHEDETA----VHVVMELCQGGDLFDRI----IAKGYYSERDAAPVLRAIV 137
            PNI+ L +    E        +++   + G L++ I        + +E     +L  I 
Sbjct: 85  HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             +   H+ G  HRDLKP N   +  +      + D GS 
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNI-LLGDEGQ--PVLMDLGSM 181

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  130 bits (329), Expect = 1e-34
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y     LG G FG   L T   T    A K ++++  +K ++  M + REI   +LL  
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ-LLKKSDMHMRVEREISYLKLLR- 67

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P+I++L       T + +V+E   GG+LFD I+ K   +E +     + I+ A+  CH 
Sbjct: 68  HPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             ++HRDLKPEN      DDN  +K+ DFG + +  +  
Sbjct: 127 HKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN 162

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score =  125 bits (316), Expect = 3e-34
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 30/201 (14%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 274 NGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
           NG ID+ EF T    + +  +  E + +AF+ FDKD +GY    E R +           
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----------- 109

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT----DIYKLET 385
                     G   T +      + +++ + DIDG+G +++ EFV +MT           
Sbjct: 110 ------MTNLGEKLTDEE-----VDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAAR 158

Query: 386 PELLEKAFQYLDKNSDQFITV 406
            E++    + + K +  F  +
Sbjct: 159 KEVIRNKIRAIGKMARVFSVL 179

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 70.2 bits (173), Expect = 2e-14
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 33/143 (23%)

Query: 300 KAFQYFDKDNSG---YDEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
           +AF  FDKD  G     E    M                  +  G   T+       L+ 
Sbjct: 15  EAFSLFDKDGDGTITTKELGTVM------------------RSLGQNPTEA-----ELQD 51

Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFK 414
           ++ + D DGNG IDF EF+ +M    K  ++ E + +AF+  DK+ + +I+  EL     
Sbjct: 52  MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111

Query: 415 ENNMGD---DATIKEIISEVGRD 434
              +G+   D  + E+I E   D
Sbjct: 112 N--LGEKLTDEEVDEMIREADID 132

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score =  126 bits (318), Expect = 3e-34
 Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 38/212 (17%)

Query: 184 GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEM----DTDKNG 239
            G     +   L   +  + +K +K   + I + +P E+T   K++ IE+    D ++ G
Sbjct: 4   CGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETG 63

Query: 240 TLSYDELRAGLTK-VGSMLTEFDVKQLMEAA---------DMDGNGAIDYTEFTAATIQR 289
            L YDE+ +G  + +        V+ + + A          ++  G+ D+ EF    +  
Sbjct: 64  KLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLML 123

Query: 290 QKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ 346
             +     L+  F   D   +     +EF+  V                  K      K 
Sbjct: 124 CYIYDFFELTVMFDEIDASGNMLVDEEEFKRAV-----------------PKLEAWGAKV 166

Query: 347 FRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                + K    + D +G G++ F EF    +
Sbjct: 167 EDPAALFK----ELDKNGTGSVTFDEFAAWAS 194

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  128 bits (323), Expect = 1e-33
 Identities = 25/182 (13%), Positives = 47/182 (25%), Gaps = 33/182 (18%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL-- 83
                  L  G   V +L  +      +A K      +   +E + +        RLL  
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 84  --------------------SGQPNIVELKSAHEDETAVH--VVMELCQG-----GDLFD 116
                                 QP   +L    +D    +  ++M              D
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 117 RIIAKGYYSERDAAPVL-RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +          A  +L   ++       S G++H    P+N        +  L + D  
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI---MPDGRLMLGDVS 239

Query: 176 SA 177
           + 
Sbjct: 240 AL 241

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  127 bits (322), Expect = 2e-33
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y   + +G G FG   L         Y  K +    +M   E +   RRE+ +   +
Sbjct: 23  MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREE-SRREVAVLANM 80

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVN 141
              PNIV+ + + E+  ++++VM+ C+GGDLF RI A     + E         I  A+ 
Sbjct: 81  K-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             H   ++HRD+K +N  F+++D    +++ DFG A
Sbjct: 140 HVHDRKILHRDIKSQN-IFLTKDGT--VQLGDFGIA 172

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score =  121 bits (306), Expect = 2e-33
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 32/158 (20%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF--- 282
            +  F E+D + +G +SY+E++A ++K  ++  E  ++ + ++ D DGNG ID  EF   
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 283 TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKF 339
             +   +   +    L   ++  D D  G    +E  +                   KK 
Sbjct: 62  YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF-----------------FKKH 104

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           G         +  + + V++ D +G+G I   EF+   
Sbjct: 105 G---------IEKVAEQVMKADANGDGYITLEEFLEFS 133

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 31/143 (21%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
               F+  D +  G   Y+E +A       +     I  ++                +L+
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAF------VSKKRAIKNEQ----------------LLQ 39

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYK---LETPELLEKAFQYLDKNSDQFITVNELET 411
            +    D DGNG ID  EF      I      +    L+  ++ +D + D  +T  E+ +
Sbjct: 40  LIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTS 99

Query: 412 AFKENNMGDDATIKEIISEVGRD 434
            FK++ +     + E + +   +
Sbjct: 100 FFKKHGIEK---VAEQVMKADAN 119

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 50.6 bits (122), Expect = 6e-08
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
            ++   LK  +  MD D +G L+ +E+ +   K         V + +  AD +G+G I  
Sbjct: 71  SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKK----HGIEKVAEQVMKADANGDGYITL 126

Query: 280 TEFTA 284
            EF  
Sbjct: 127 EEFLE 131

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  126 bits (318), Expect = 2e-33
 Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  G +LG G +G      ++ T    A K + KK   +    +  +++EIQ+ R L  
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64

Query: 86  QPNIVELKS--AHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
             N+++L     +E++  +++VME C  G  ++ D +  +  +    A      +++ + 
Sbjct: 65  HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGLE 123

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEEGGE 186
             HS G++H+D+KP N   +       LK++  G +  L      +
Sbjct: 124 YLHSQGIVHKDIKPGN---LLLTTGGTLKISALGVAEALHPFAADD 166

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  126 bits (318), Expect = 8e-33
 Identities = 22/184 (11%), Positives = 45/184 (24%), Gaps = 36/184 (19%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL-- 83
               G +LG+         T+  T   +         +        M + E+   RLL  
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQM-KEEVLRLRLLRG 132

Query: 84  ----------------------SGQPNIVELKSAHEDETA--VHVVMELCQ------GGD 113
                                   +  ++ ++    D        +    Q      G  
Sbjct: 133 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEV 192

Query: 114 LFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD 173
           L                 +   ++  +   H  G++H  L+P +      D    + +T 
Sbjct: 193 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTG 249

Query: 174 FGSA 177
           F   
Sbjct: 250 FEHL 253

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  123 bits (311), Expect = 2e-32
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 22/180 (12%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           +  +   + LGRG FGV +       +  YA K + + P  + A   +M  RE++    L
Sbjct: 4   LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVM--REVKALAKL 60

Query: 84  SGQPNIVELKSAHEDETA------------VHVVMELCQGGDLFDRIIAKGYYSERDAAP 131
              P IV   +A  ++              +++ M+LC+  +L D +  +    ER+ + 
Sbjct: 61  E-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119

Query: 132 VLRA---IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
            L     I  AV   HS G+MHRDLKP N  F + DD   +KV DFG     +++  E +
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNI-FFTMDDV--VKVGDFGLVTAMDQDEEEQT 176

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  124 bits (312), Expect = 3e-32
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 19/184 (10%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
             S R +   +G+  E   L     R+L  G F   Y   +  +   YA K +    +  
Sbjct: 9   GASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE-- 66

Query: 66  YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA--------VHVVMELCQGG--DLF 115
             E +  I +E+   + LSG PNIV+  SA                ++ ELC+G   +  
Sbjct: 67  --EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL 124

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVTD 173
            ++ ++G  S      +      AV   H     ++HRDLK EN   +S      +K+ D
Sbjct: 125 KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENL-LLSNQGT--IKLCD 181

Query: 174 FGSA 177
           FGSA
Sbjct: 182 FGSA 185

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  123 bits (311), Expect = 3e-32
 Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 9/187 (4%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
               + +  +      + + ++   + +GRG+F   Y        +P A K +     M 
Sbjct: 13  VPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD 72

Query: 66  YAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI----IAK 121
                    +EI + + L+  PN+++  ++  ++  +++V+EL   GDL   I      K
Sbjct: 73  AKARAD-CIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130

Query: 122 GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
               ER        + +A+   HS  VMHRD+KP N  FI+      +K+ D G    F 
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN-VFITATGV--VKLGDLGLGRFFS 187

Query: 182 EEGGEAS 188
            +   A 
Sbjct: 188 SKTTAAH 194

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  121 bits (307), Expect = 6e-32
 Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 17/176 (9%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
              Y     +G G +G        S       K +     M  AE   M+  E+ + R L
Sbjct: 5   AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQ-MLVSEVNLLREL 62

Query: 84  SGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRII----AKGYYSERDAAPVLRAIV 137
              PNIV       D T   +++VME C+GGDL   I      + Y  E     V+  + 
Sbjct: 63  K-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121

Query: 138 NAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
            A+  CH        V+HRDLKP N  F+    N  +K+ DFG A +   +   A 
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAK 174

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  123 bits (310), Expect = 8e-32
 Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 36/201 (17%)

Query: 5   VSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM 64
           ++K  +++   +          Y   R L +G+F    LC +   N  YA K   K    
Sbjct: 19  LNKYVKEKDKYIND--------YRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLE 68

Query: 65  KYAENDMM-------------IRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
           K  +                  + E+QI   +      +  +    +   V+++ E  + 
Sbjct: 69  KKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMEN 127

Query: 112 GDLFDRIIAKGY--------YSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFIS 162
             +                    +    ++++++N+ +  H+   + HRD+KP N   I 
Sbjct: 128 DSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN---IL 184

Query: 163 RDDNALLKVTDFGSALLFEEE 183
            D N  +K++DFG +    ++
Sbjct: 185 MDKNGRVKLSDFGESEYMVDK 205

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  121 bits (305), Expect = 2e-31
 Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     LG G +G  +          YA K     P     ++      E+     +  
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS-MSPFRG-PKDRARKLAEVGSHEKVGQ 115

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCH 144
            P  V L+ A E+   +++  ELC G  L     A G    E      LR  + A+   H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           S G++H D+KP N  F+        K+ DFG  
Sbjct: 175 SQGLVHLDVKPANI-FLGPRGR--CKLGDFGLL 204

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score =  116 bits (292), Expect = 3e-31
 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)

Query: 203 MSKLKK-LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 261
           MSK +  L    +   L  E+ Q + E F   D + +G L Y EL+  +  +G  L + +
Sbjct: 1   MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60

Query: 262 VKQLMEAADMDGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
           +  L++  D +G   + Y +F      +  K +  + + +AFQ FD D++G       R 
Sbjct: 61  ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +                 AK+ G   T +      L+ ++ + D+DG+G I+  EF+ + 
Sbjct: 121 V-----------------AKELGETLTDEE-----LRAMIEEFDLDGDGEINENEFIAIC 158

Query: 378 TD 379
           TD
Sbjct: 159 TD 160

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 71.8 bits (177), Expect = 4e-15
 Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 31/144 (21%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           + +AF  FD +N G   Y E +  +++                  G    K+      + 
Sbjct: 25  IYEAFSLFDMNNDGFLDYHELKVAMKA-----------------LGFELPKR-----EIL 62

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
            L+ + D +G   + + +F  +M + I K +  + +++AFQ  D +    I++  L    
Sbjct: 63  DLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVA 122

Query: 414 KENNMGD---DATIKEIISEVGRD 434
           KE  +G+   D  ++ +I E   D
Sbjct: 123 KE--LGETLTDEELRAMIEEFDLD 144

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score =  117 bits (294), Expect = 2e-30
 Identities = 37/241 (15%), Positives = 77/241 (31%), Gaps = 48/241 (19%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD------VKQLMEAADM 271
                     E ++  D D +G L   EL+  + ++     +        +K  ++    
Sbjct: 10  SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69

Query: 272 DGNGAIDYTEF---------TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMV 319
             +G I   E               + Q+L+  E   K ++ +D D+SG+   +E +  +
Sbjct: 70  RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM---LKKLVLQGDIDGNGNIDFIEFVNL 376
                            K       K      +      ++   D + +G ++  E   L
Sbjct: 130 -----------------KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARL 172

Query: 377 MTDIYKL--------ETPELLEKAFQYLDKNSDQFITVNELETAFKE--NNMGDDATIKE 426
           +                 +   KAF+  D++ + +I  NEL+   K+       +  I  
Sbjct: 173 LPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINN 232

Query: 427 I 427
           I
Sbjct: 233 I 233

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 66.8 bits (163), Expect = 1e-12
 Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 42/175 (24%)

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFG 340
            + +Q   +  S++  + + +FD D SGY    E + +      I+ +         +  
Sbjct: 5   ESHLQSSLITASQFF-EIWLHFDADGSGYLEGKELQNL------IQELLQARKKAGLEL- 56

Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY---------KLETPELLEK 391
                       +K  V Q     +G I  +E  +++             +L++ E   K
Sbjct: 57  ---------SPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMK 107

Query: 392 AFQYLDKNSDQFITVNELETAFKENNMGDDAT-----------IKEIISEVGRDH 435
            ++  D +   FI   EL+   K+  + + A               ++     ++
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKD--LLEKANKTVDDTKLAEYTDLMLKLFDSNN 160

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 24/179 (13%), Positives = 54/179 (30%), Gaps = 51/179 (28%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 262
           +  L +   K + +    E T  +       D++ +G L   E+   L    + L +F  
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLM---LKLFDSNNDGKLELTEMARLLPVQENFLLKF-- 183

Query: 263 KQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMV 319
                                     +      +  +KAF+ +D+D +GY   +E  A++
Sbjct: 184 --------------------------QGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                            K     N ++    N+         +   G +   +   +++
Sbjct: 218 -----------------KDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILS 259

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score =  114 bits (287), Expect = 2e-30
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 26/186 (13%)

Query: 197 MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM 256
           M    +     +   K     L  E+ Q ++E F   DTD +GT+   EL+  +  +G  
Sbjct: 1   MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE 60

Query: 257 LTEFDVKQLMEAADMDGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY--- 312
             + ++K+++   D DG+G ID+ EF T  T +  + +  E + KAF+ FD DNSG    
Sbjct: 61  PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITI 120

Query: 313 DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE 372
            + R +                 AK+ G   T++      L++++ + D + +  ID  E
Sbjct: 121 KDLRRV-----------------AKELGENLTEE-----ELQEMIAEADRNDDNEIDEDE 158

Query: 373 FVNLMT 378
           F+ +M 
Sbjct: 159 FIRIMK 164

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 37/166 (22%)

Query: 283 TAATIQRQKLERSEYLSK--------AFQYFDKDNSG---YDEFR-AMVESPQTIRNVSH 330
           T  + +R + +    L++        AF  FD D SG     E + AM            
Sbjct: 7   TVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM------------ 54

Query: 331 IYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELL 389
                 +  G    K+      +KK++ + D DG+G IDF EF+ +MT  + + ++ E +
Sbjct: 55  ------RALGFEPKKE-----EIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEI 103

Query: 390 EKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRD 434
            KAF+  D ++   IT+ +L    KE      +  ++E+I+E  R+
Sbjct: 104 LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRN 149

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score =  114 bits (288), Expect = 3e-30
 Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 37/193 (19%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
               + Q L E F  +DTD +G +S  EL A L+  G   +    ++L+   D + +G I
Sbjct: 21  RHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEI 80

Query: 278 DYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTD 334
            + EF         +       + F+  D    G    +E RA                 
Sbjct: 81  TFDEFKDLHHFILSMR------EGFRKRDSSGDGRLDSNEVRAA---------------- 118

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQ 394
                G   ++Q       + L+ + D    G++ F ++V L   + +      +   F 
Sbjct: 119 -LLSSGYQVSEQT-----FQALMRKFDRQRRGSLGFDDYVELSIFVCR------VRNVFA 166

Query: 395 YLDKNSDQFITVN 407
           + D+     +T  
Sbjct: 167 FYDRERTGQVTFT 179

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 48/155 (30%)

Query: 292 LERSEYLSKAFQYFDKDNSG---YDEFR-AMVE-----SPQTIRNVSHIYTDKAKKFGLG 342
           +  ++ L + F+  D D SG     E   A+       S  T   +              
Sbjct: 23  MNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKL-------------- 68

Query: 343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 402
                  ++M        D + +G I F EF +L   I  +       + F+  D + D 
Sbjct: 69  -------LHMY-------DKNHSGEITFDEFKDLHHFILSMR------EGFRKRDSSGDG 108

Query: 403 FITVNELETAFKENNMG---DDATIKEIISEVGRD 434
            +  NE+  A      G    + T + ++ +  R 
Sbjct: 109 RLDSNEVRAALLS--SGYQVSEQTFQALMRKFDRQ 141

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  115 bits (291), Expect = 1e-29
 Identities = 34/169 (20%), Positives = 55/169 (32%), Gaps = 30/169 (17%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +    ++G G FG  +          Y  K +           +    RE++    L   
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN--------NEKAEREVKALAKLD-H 63

Query: 87  PNIVELKSAHEDETA----------------VHVVMELCQGGDLFDRIIAK--GYYSERD 128
            NIV      +                    + + ME C  G L   I  +      +  
Sbjct: 64  VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123

Query: 129 AAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           A  +   I   V+  HS  +++RDLKP N  F+       +K+ DFG  
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNI-FLVDTKQ--VKIGDFGLV 169

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score =  111 bits (280), Expect = 1e-29
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 26/162 (16%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q ++E F   D D  GT+   EL+  +  +G    + ++K+++   D +G G +++ 
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62

Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
           +F T  T +  + +  E + KAF+ FD D +G       + +                 A
Sbjct: 63  DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRV-----------------A 105

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           K+ G   T +      L++++ + D DG+G +   EF+ +M 
Sbjct: 106 KELGENLTDEE-----LQEMIDEADRDGDGEVSEQEFLRIMK 142

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 74.0 bits (183), Expect = 4e-16
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 31/144 (21%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           + +AF  FD D +G     E +  + +                  G    K+      +K
Sbjct: 8   IREAFDLFDADGTGTIDVKELKVAMRA-----------------LGFEPKKE-----EIK 45

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           K++ + D +G G ++F +F+ +MT  + + +T E + KAF+  D +    I+   L+   
Sbjct: 46  KMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA 105

Query: 414 KENNMGD---DATIKEIISEVGRD 434
           KE  +G+   D  ++E+I E  RD
Sbjct: 106 KE--LGENLTDEELQEMIDEADRD 127

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score =  111 bits (280), Expect = 2e-29
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 34/186 (18%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFD 261
           M  + K      VE L  E+    K  F       ++G++S  EL   +  +G   T  +
Sbjct: 1   MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56

Query: 262 VKQLMEAADMDGNGAIDYTEFTAATIQRQK----LERSEYLSKAFQYFDKDNSGY---DE 314
           ++++++  D DG+G +D+ EF    ++  K     +  E LS  F+ FDK+  GY   +E
Sbjct: 57  LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116

Query: 315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
            + M                  +  G   T+       +++L+  GD + +G ID+ EF+
Sbjct: 117 LKIM-----------------LQATGETITEDD-----IEELMKDGDKNNDGRIDYDEFL 154

Query: 375 NLMTDI 380
             M  +
Sbjct: 155 EFMKGV 160

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK----LETPELLEKAFQYLDKNSDQFITVNE 408
           L++++ + D DG+G +DF EF+ +M    K     ++ E L   F+  DKN+D +I + E
Sbjct: 57  LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116

Query: 409 LETAFKENNMGD---DATIKEIISEVGRD 434
           L+   +    G+   +  I+E++ +  ++
Sbjct: 117 LKIMLQA--TGETITEDDIEELMKDGDKN 143

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score =  110 bits (278), Expect = 3e-29
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 29/170 (17%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
            +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71

Query: 276 AIDYTEFTAATIQRQKLERS----EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNV 328
            ID+ EF    +++ K +      E L+  F+ FDK+  G+   +E   +          
Sbjct: 72  TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI---------- 121

Query: 329 SHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                   +  G   T++      ++ L+   D + +G IDF EF+ +M 
Sbjct: 122 -------LRATGEHVTEED-----IEDLMKDSDKNNDGRIDFDEFLKMME 159

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 73.8 bits (182), Expect = 7e-16
 Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 42/168 (25%)

Query: 285 ATIQRQKLERSEYLSK--------AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYT 333
           A++  Q+ E   +LS+        AF  FD D  G     E   ++              
Sbjct: 1   ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM------------ 48

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETP----ELL 389
                 G   TK+      L  ++ + D DG+G IDF EF+ +M    K +      E L
Sbjct: 49  -----LGQNPTKE-----ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEEL 98

Query: 390 EKAFQYLDKNSDQFITVNELETAFKENNMGD---DATIKEIISEVGRD 434
              F+  DKN+D FI + EL    +    G+   +  I++++ +  ++
Sbjct: 99  ANCFRIFDKNADGFIDIEELGEILRA--TGEHVTEEDIEDLMKDSDKN 144

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 22/76 (28%), Positives = 39/76 (51%)

Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
           + V+ + E   G+  + L   F   D + +G +  +EL   L   G  +TE D++ LM+ 
Sbjct: 81  MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140

Query: 269 ADMDGNGAIDYTEFTA 284
           +D + +G ID+ EF  
Sbjct: 141 SDKNNDGRIDFDEFLK 156

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  116 bits (291), Expect = 4e-29
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
                 +LG G F   Y  T+   N     +    K +      +  I  ++  R   S 
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY-----SERDAAPVLRAIVNAV 140
           Q   ++  SAH  +    +V EL   G L + I            +         ++  +
Sbjct: 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI 185

Query: 141 NVCHSMGVMHRDLKPENFCFISR--------DDNALLKVTDFGSA 177
              H   ++H D+KP+NF   +         D +A L + D G +
Sbjct: 186 EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQS 230

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score =  110 bits (278), Expect = 4e-29
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 40/197 (20%)

Query: 219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAI 277
              +   L   F  +D D++G +S  EL+  L+           V+ ++   D +    +
Sbjct: 2   ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61

Query: 278 DYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFR-AMVESPQTIRNVSHIYT 333
           +++EFT         +        F+ +D+DNSG    +E + A+               
Sbjct: 62  NFSEFTGVWKYITDWQ------NVFRTYDRDNSGMIDKNELKQAL--------------- 100

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAF 393
                FG   + QF        L+ + D  G G I F +F+        L+    L   F
Sbjct: 101 ---SGFGYRLSDQF-----HDILIRKFDRQGRGQIAFDDFIQGCI---VLQR---LTDIF 146

Query: 394 QYLDKNSDQFITVNELE 410
           +  D + D +I V+  +
Sbjct: 147 RRYDTDQDGWIQVSYEQ 163

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 78.0 bits (193), Expect = 3e-17
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 11/101 (10%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
              +  F   D D +G +  +EL+  L+  G  L++     L+   D  G G I + +F 
Sbjct: 74  TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
              I  Q+      L+  F+ +D D  G     Y+++ +MV
Sbjct: 134 QGCIVLQR------LTDIFRRYDTDQDGWIQVSYEQYLSMV 168

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 62.6 bits (153), Expect = 7e-12
 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 35/150 (23%)

Query: 292 LERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR 348
           L    +L   FQ  DKD SG     E +  + +                    G    F 
Sbjct: 3   LPDQSFLWNVFQRVDKDRSGVISDTELQQALSN--------------------GTWTPFN 42

Query: 349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
               ++ ++   D +    ++F EF  +   I   +        F+  D+++   I  NE
Sbjct: 43  -PVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQ------NVFRTYDRDNSGMIDKNE 95

Query: 409 LETAFKENNMG---DDATIKEIISEVGRDH 435
           L+ A      G    D     +I +  R  
Sbjct: 96  LKQALSG--FGYRLSDQFHDILIRKFDRQG 123

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score =  110 bits (278), Expect = 8e-29
 Identities = 39/205 (19%), Positives = 67/205 (32%), Gaps = 46/205 (22%)

Query: 207 KKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG-----LTKVGSMLTEFD 261
            K  VK+  ++      +  K  F  +D + NG ++ DE+ +        K+ +   +  
Sbjct: 3   SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62

Query: 262 VKQLMEAADMDGNGA-----IDYTEFTAATIQRQKLERS-----------EYLSKAFQYF 305
             Q+   A   G G      I + +F     Q    E             E+    F  F
Sbjct: 63  RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122

Query: 306 DKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI 362
           DKD SG    DE++A                   K  G+  +++       +      D+
Sbjct: 123 DKDGSGTITLDEWKAY-----------------GKISGISPSQE-----DCEATFRHCDL 160

Query: 363 DGNGNIDFIEFVNLMTDIYKLETPE 387
           D  G++D  E        +    PE
Sbjct: 161 DNAGDLDVDEMTRQHLGFWYTLDPE 185

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 37/157 (23%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
               F + D + +G    DE  +                D   K      +         
Sbjct: 22  HKHMFDFLDINGNGKITLDEIVSKASD------------DICAKLEATPEQT-----KRH 64

Query: 355 KLVLQGDIDGNG-----NIDFIEFVNLMTDIYKLE-----------TPELLEKAFQYLDK 398
           ++ ++    G G      I F +F++    +   E             E  +  F   DK
Sbjct: 65  QVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDK 124

Query: 399 NSDQFITVNELETAFKENNMGD-DATIKEIISEVGRD 434
           +    IT++E +   K + +       +        D
Sbjct: 125 DGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLD 161

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 19/82 (23%), Positives = 31/82 (37%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 262
             +L    +K      P    +     F   D D +GT++ DE +A     G   ++ D 
Sbjct: 92  WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDC 151

Query: 263 KQLMEAADMDGNGAIDYTEFTA 284
           +      D+D  G +D  E T 
Sbjct: 152 EATFRHCDLDNAGDLDVDEMTR 173

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score =  109 bits (274), Expect = 4e-28
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 27/189 (14%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGN 274
           + +P +ET      F  M    +G  +  E +  L   G +      + Q+    D + +
Sbjct: 14  KAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKD 71

Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHI 331
           G +D+ EF AA     + +  + L   F+ +D D +G    +E   M  + Q +     +
Sbjct: 72  GFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTL 131

Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEK 391
             ++                 +  +  + DI+ +G +   EF+N M      +  +LLE 
Sbjct: 132 SPEE----------------FINLVFHKIDINNDGELTLEEFINGMA-----KDQDLLEI 170

Query: 392 AFQYLDKNS 400
            ++  D ++
Sbjct: 171 VYKSFDFSN 179

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK------ 414
           D + +G +DF+EF+  +  I + +  + L+  F+  D + +  I  NEL   F       
Sbjct: 67  DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALN 126

Query: 415 -ENNMGDDATIKEIISEVGRDH 435
            +  +  +  I  +  ++  ++
Sbjct: 127 GQQTLSPEEFINLVFHKIDINN 148

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score =  107 bits (270), Expect = 5e-28
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 39/178 (21%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           +   L  EE + L+E F E D DK+G ++  +L   +  +G M TE ++ +L +  +M+ 
Sbjct: 1   MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60

Query: 274 NGAIDYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGY---DEFR-AMVESPQT 324
            G +D+ +F      +   E ++      L  AF+ FD +  G     E R AM      
Sbjct: 61  GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL--- 117

Query: 325 IRNVSHIYTDKAKKFGLGNTKQFRAMNM----LKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           LG         +    +++++   D++G+G +DF EFV +M+
Sbjct: 118 ----------------LG-------HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 34/148 (22%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L +AF+ FDKD  G     +    + +                  G   T+       L 
Sbjct: 13  LREAFREFDKDKDGYINCRDLGNCMRT-----------------MGYMPTEM-----ELI 50

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-----LEKAFQYLDKNSDQFITVNEL 409
           +L  Q +++  G++DF +FV LM      ET ++     L  AF+  D N D  I+ +EL
Sbjct: 51  ELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110

Query: 410 ETAFKENNMGDDAT---IKEIISEVGRD 434
             A +   +G       I+EII +V  +
Sbjct: 111 REAMRA-LLGHQVGHRDIEEIIRDVDLN 137

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score =  107 bits (269), Expect = 6e-28
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 31/173 (17%)

Query: 215 VEYLPGEETQALKEKFIEMDT-DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           V  L   + + L+  F + +T + +G +S D++   L  +G   T+  ++QL++  D  G
Sbjct: 4   VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63

Query: 274 NGAIDYTEFTAATIQR-----QKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTI 325
           NG ID+  F     +         +  + L +AF+ +DK+ +GY   D  R +       
Sbjct: 64  NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREI------- 116

Query: 326 RNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                       +     + +      L  ++ + D DG+G +DF EF+ +MT
Sbjct: 117 ----------LAELDETLSSED-----LDAMIDEIDADGSGTVDFEEFMGVMT 154

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 32/147 (21%)

Query: 298 LSKAFQYFDK-DNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
           L  AF+ F+  + SG    D+   ++E                   G+  TK       +
Sbjct: 15  LETAFRDFETPEGSGRVSTDQIGIILEV-----------------LGIQQTKS-----TI 52

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMT-----DIYKLETPELLEKAFQYLDKNSDQFITVNE 408
           ++L+ + D  GNG+IDF  F  +       ++   +  + L +AF+  DK  + +I+ + 
Sbjct: 53  RQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDV 112

Query: 409 LETAFKENNMG-DDATIKEIISEVGRD 434
           +     E +       +  +I E+  D
Sbjct: 113 MREILAELDETLSSEDLDAMIDEIDAD 139

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 209 LTVKVIVEYLPGEETQA-LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLME 267
           +  + + E +  E+ Q  L+E F   D + NG +S D +R  L ++   L+  D+  +++
Sbjct: 75  IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMID 134

Query: 268 AADMDGNGAIDYTEFTA 284
             D DG+G +D+ EF  
Sbjct: 135 EIDADGSGTVDFEEFMG 151

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  111 bits (278), Expect = 4e-27
 Identities = 20/194 (10%), Positives = 48/194 (24%), Gaps = 38/194 (19%)

Query: 15  ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
            LG+           G +LG+         T+  T   +         +        M  
Sbjct: 72  ELGERP----RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 127

Query: 75  REIQIRRL-----------------------LSGQPNIVELKSAHEDETAVH--VVMELC 109
             +++R L                          +  ++ ++    D   +    +    
Sbjct: 128 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 187

Query: 110 QG------GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR 163
           Q         L                 +   ++  +   H  G++H  L+P +   + +
Sbjct: 188 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLDQ 246

Query: 164 DDNALLKVTDFGSA 177
                + +T F   
Sbjct: 247 RGG--VFLTGFEHL 258

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score =  104 bits (261), Expect = 6e-27
 Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           ++    KE F   D+++ G ++ + L+  L + G  +      ++   AD  GNG I + 
Sbjct: 3   DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62

Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
           EF +    + ++    + L +AF+ FD + +GY      +        + N+        
Sbjct: 63  EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQ------DALLNLGDRLKPHE 116

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                             + +   + +  G I +  F+N M 
Sbjct: 117 ----------------FAEFLGITETE-KGQIRYDNFINTMF 141

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 72.5 bits (179), Expect = 1e-15
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 31/142 (21%)

Query: 300 KAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
           +AF+ FD + +G    +  + +++                  FG+             ++
Sbjct: 10  EAFELFDSERTGFITKEGLQTVLKQ-----------------FGVRVEPA-----AFNEM 47

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKE 415
             + D  GNG I F EF+++M    K  T E +L +AF+  D     +I    L+ A   
Sbjct: 48  FNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLN 107

Query: 416 NNMGDDAT---IKEIISEVGRD 434
             +GD        E +     +
Sbjct: 108 --LGDRLKPHEFAEFLGITETE 127

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score =  104 bits (262), Expect = 6e-27
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           + + L  E+    KE F   D D +G++S  EL   +  +G   +E +V  LM   D+DG
Sbjct: 1   MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60

Query: 274 NGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
           N AI+++EF    + Q +  +  + L +AF+ FDK+  G     E + +           
Sbjct: 61  NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHV----------- 109

Query: 330 HIYTDKAKKFGLGNTKQFRAMNM----LKKLVLQGDIDGNGNIDFIEFVNLMT 378
                     G           +    + +++ +   DG+G I+  +F  L++
Sbjct: 110 ------LTSIG---------EKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 68.6 bits (169), Expect = 3e-14
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 33/140 (23%)

Query: 300 KAFQYFDKDNSG---YDEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
           +AF  FDKDNSG     E    M                  +  GL  ++       +  
Sbjct: 15  EAFALFDKDNSGSISASELATVM------------------RSLGLSPSEA-----EVAD 51

Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFK 414
           L+ + D+DGN  I+F EF+ LM+   K  ++ + L +AF+  DKN D  I+  EL+    
Sbjct: 52  LMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 111

Query: 415 ENNMGD---DATIKEIISEV 431
              +G+   DA + E++ EV
Sbjct: 112 S--IGEKLTDAEVDEMLREV 129

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score =  104 bits (262), Expect = 6e-27
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 27/168 (16%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           +E + L ++F ++D D +G+LS +E  +      + L    V+++++  D DGNG +D+ 
Sbjct: 3   DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL----VQRVIDIFDTDGNGEVDFK 58

Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
           EF    +    K ++ + L  AF+ +D D  GY    E   ++                 
Sbjct: 59  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL----------------- 101

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
           K     N K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 102 KMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 36/148 (24%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L K F+  D DNSG    +EF ++ E                    L          +++
Sbjct: 8   LGKRFKKLDLDNSGSLSVEEFMSLPE--------------------LQQNP------LVQ 41

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           +++   D DGNG +DF EF+  ++    K +  + L  AF+  D + D +I+  EL    
Sbjct: 42  RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 101

Query: 414 KE---NNMGDD---ATIKEIISEVGRDH 435
           K    NN+ D      + + I    +D 
Sbjct: 102 KMMVGNNLKDTQLQQIVDKTIINADKDG 129

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  108 bits (271), Expect = 7e-27
 Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 24/173 (13%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     +G G FG  + C +      YA K   KKP    + ++    RE+    +L  
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAG-SVDEQNALREVYAHAVLGQ 69

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI----IAKGYYSERDAAPVLRAIVNAVN 141
             ++V   SA  ++  + +  E C GG L D I        Y+ E +   +L  +   + 
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129

Query: 142 VCHSMGVMHRDLKPENFCFISRD-----------------DNALLKVTDFGSA 177
             HSM ++H D+KP N  FISR                  +  + K+ D G  
Sbjct: 130 YIHSMSLVHMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score =  103 bits (259), Expect = 1e-26
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 34/171 (19%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           E L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG
Sbjct: 2   EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61

Query: 276 AIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHI 331
            ID+ EF +    + ++ +  E L +AF+ FD+D +G     E R +             
Sbjct: 62  TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV------------- 108

Query: 332 YTDKAKKFGLGNTKQFRAMNM----LKKLVLQGDIDGNGNIDFIEFVNLMT 378
                   G           +    + +++ + DIDG+G+I++ EFV +M 
Sbjct: 109 ----MTNLG---------EKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 67.1 bits (165), Expect = 1e-13
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 37/145 (25%)

Query: 300 KAFQYFDKDNSG---YDE----FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           +AF  FDKD  G     E     R++ ++P                     T+       
Sbjct: 14  EAFALFDKDGDGTITTKELGTVMRSLGQNP---------------------TEA-----E 47

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
           L+ ++ + D DGNG IDF EF++LM    K  ++ E L +AF+  D++ +  I+  EL  
Sbjct: 48  LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107

Query: 412 AFKE--NNMGDDATIKEIISEVGRD 434
                   + DD  + E+I E   D
Sbjct: 108 VMTNLGEKLTDD-EVDEMIREADID 131

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score =  102 bits (256), Expect = 2e-25
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 196 RMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKV 253
            +  +++   L    +          E +AL E F ++ +    +G ++ +E +  L K 
Sbjct: 20  DLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT 79

Query: 254 GSMLTEFDVKQLMEAADMDGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
               + F   ++ +  D   NG + + EF  A ++        + +  +FQ +D    G+
Sbjct: 80  NKKESLF-ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGF 138

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
               E + MV +  T+        D           +       ++     D   +G ID
Sbjct: 139 IERQEVKQMVVA--TLAESGMNLKD--------TVIEDIIDKTFEEA----DTKHDGKID 184

Query: 370 FIEFVNLM 377
             E+ +L+
Sbjct: 185 KEEWRSLV 192

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 11/108 (10%)

Query: 339 FGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETPEL-LEKAFQYL 396
           F L   K  +  ++    V    D   NG + F EF   ++  +     +  +  +FQ  
Sbjct: 72  FQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLY 131

Query: 397 DKNSDQFITVNELETA----FKENNMGDD-----ATIKEIISEVGRDH 435
           D     FI   E++        E+ M          I +   E    H
Sbjct: 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKH 179

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score =  101 bits (252), Expect = 5e-25
 Identities = 31/190 (16%), Positives = 73/190 (38%), Gaps = 23/190 (12%)

Query: 196 RMKQFRRMSKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTD--KNGTLSYDELRAGLT 251
           + K+   M        +++        EE +AL E F ++ +    +G +  +E +  L 
Sbjct: 7   KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66

Query: 252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNS 310
           +  +    F   ++ +  D+  NG I++ EF  +  +        E +  AF+ +D   +
Sbjct: 67  RNRNRRNLF-ADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQT 125

Query: 311 GY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGN 367
           G+   +E + MV +   +     + ++        +  +        +     D   +G 
Sbjct: 126 GFIEREELKEMVVA--LLHESELVLSE--------DMIEVMVDKAFVQA----DRKNDGK 171

Query: 368 IDFIEFVNLM 377
           ID  E+ + +
Sbjct: 172 IDIDEWKDFV 181

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 11/108 (10%)

Query: 339 FGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETPEL-LEKAFQYL 396
           F L   +     N+    +    D+  NG I+F EFV  +   +        ++ AF+  
Sbjct: 61  FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120

Query: 397 DKNSDQFITVNELETAFKENNMGDDATIKE---------IISEVGRDH 435
           D     FI   EL+          +  + E            +  R +
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKN 168

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score =  100 bits (251), Expect = 5e-25
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            + Q   +KF  ++   +GTL   E +       +      V+ +  A D +G+  ID+ 
Sbjct: 22  AQLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 79

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAK 337
           E+ AA     +      L   F+ +DKD +G     E   +VES   ++    +  +  +
Sbjct: 80  EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +  L   ++      + ++ L  D +G+G +   EFV   
Sbjct: 140 QGKLLTPEEV-----VDRIFLLVDENGDGQLSLNEFVEGA 174

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 57.5 bits (139), Expect = 8e-10
 Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 53/177 (29%)

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKA 336
               AA +Q           K F   ++  SG     EF+                    
Sbjct: 17  GAADAAQLQE--------WYKKF--LEECPSGTLFMHEFKRF-----------------F 49

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
           K        Q+     ++ +    D +G+  IDF+E+V  +  + +      L+  F+  
Sbjct: 50  KVPDNEEATQY-----VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIY 104

Query: 397 DKNSDQFITVNELETAFK------------------ENNMGDDATIKEIISEVGRDH 435
           DK+ +  I   EL    +                     +  +  +  I   V  + 
Sbjct: 105 DKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENG 161

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 23/106 (21%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD---------------- 261
           L G     LK  F   D D+NG +   EL   +  +  +                     
Sbjct: 89  LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148

Query: 262 -VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFD 306
            V ++    D +G+G +   EF           R +++ K  Q   
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEFVEG------ARRDKWVMKMLQMDL 188

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 96.1 bits (240), Expect = 1e-24
 Identities = 40/77 (51%), Positives = 54/77 (70%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM 271
           K + E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 272 DGNGAIDYTEFTAATIQ 288
           D +G IDY EF AAT+ 
Sbjct: 71  DKSGTIDYGEFIAATVH 87

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 31/111 (27%)

Query: 272 DGNGAIDYTEFTAATIQRQKLERSEY--LSKAFQYFDKDNSGY---DEFRAMVESPQTIR 326
             +G ID  +   A    ++L   E   L + F+  D DNSG    DE +  +       
Sbjct: 1   HSSGHIDDDDKHMA----ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL------- 49

Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                     K+ G    +       +K L+   DID +G ID+ EF+   
Sbjct: 50  ----------KRVGSELMES-----EIKDLMDAADIDKSGTIDYGEFIAAT 85

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 363 DGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDA 422
             +G+ID  +    M +    E    L++ F+ +D ++   IT +EL+   K   +G + 
Sbjct: 1   HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK--RVGSEL 56

Query: 423 T---IKEIISEVGRD 434
               IK+++     D
Sbjct: 57  MESEIKDLMDAADID 71

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score =  101 bits (253), Expect = 1e-24
 Identities = 37/261 (14%), Positives = 77/261 (29%), Gaps = 60/261 (22%)

Query: 221 EETQA-LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----------VKQLMEAA 269
               A   + +   D D NG +   EL      +   L   D           K  M A 
Sbjct: 7   NLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAY 66

Query: 270 DMDGNGAIDYTEFTA-----------ATIQRQKLERSEYLSKAFQYFDKDNSGY---DEF 315
           D   +G +   E                 +   L+ S    K ++ +D D+SGY    E 
Sbjct: 67  DATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAEL 126

Query: 316 RAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN 375
           +           +  ++    KK       ++        ++   D + +G +D  +   
Sbjct: 127 KNF---------LKDLFLQHKKKIPPNKLDEY-----TDAMMKIFDKNKDGRLDLNDLAR 172

Query: 376 LMTD------------IYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE-------- 415
           ++                ++E     EK F + D +    +   E++   K+        
Sbjct: 173 ILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPS 232

Query: 416 -NNMGDDATIKEIISEVGRDH 435
            +    D   + +++    + 
Sbjct: 233 ISGGDLDKFRECLLTHCDMNK 253

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 55.8 bits (134), Expect = 6e-09
 Identities = 25/203 (12%), Positives = 52/203 (25%), Gaps = 68/203 (33%)

Query: 255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY-- 312
           S     D    ++                                  +Q+FD D++GY  
Sbjct: 3   SAFANLDAAGFLQ---------------------------------IWQHFDADDNGYIE 29

Query: 313 -DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI 371
             E                  TD+  +             + K  +   D   +G +   
Sbjct: 30  GKELDDFFRHMLKKLQPKDKITDERVQ------------QIKKSFMSAYDATFDGRLQIE 77

Query: 372 EFVNLMTDIY-----------KLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           E  N++                L+      K ++  D +S  +I+  EL+   K+  +  
Sbjct: 78  ELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQH 137

Query: 421 ---------DATIKEIISEVGRD 434
                    D     ++    ++
Sbjct: 138 KKKIPPNKLDEYTDAMMKIFDKN 160

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 35/173 (20%)

Query: 206 LKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQL 265
           LK L ++   +  P +  +         D +K+G L  ++L   L    + L +F +   
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDAS 189

Query: 266 MEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTI 325
                                    ++ER     K F ++D   +G       +E P+  
Sbjct: 190 ------------------------SQVERKRDFEKIFAHYDVSRTGA------LEGPEVD 219

Query: 326 RNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             V  +          G+  +FR   +L       D++ +G I   E    + 
Sbjct: 220 GFVKDMMELVRPSISGGDLDKFREC-LLTHC----DMNKDGKIQKSELALCLG 267

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 97.9 bits (244), Expect = 3e-24
 Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 47/201 (23%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKQLMEAADMD 272
           EE +  +  F ++  D +  +S  EL   L KV +   +           + ++   D D
Sbjct: 1   EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
             G + + EF       +K          ++ FD D SG     E     E+        
Sbjct: 60  TTGKLGFEEFKYLWNNIKK------WQAIYKQFDVDRSGTIGSSELPGAFEA-------- 105

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
                     G    +   +M + +        D  GN+DF  F++ +    +L+    +
Sbjct: 106 ---------AGFHLNEHLYSMIIRR------YSDEGGNMDFDNFISCLV---RLDA---M 144

Query: 390 EKAFQYLDKNSDQFITVNELE 410
            +AF+ LDK+    I VN  E
Sbjct: 145 FRAFKSLDKDGTGQIQVNIQE 165

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 75.5 bits (186), Expect = 3e-16
 Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 12/101 (11%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           +  +  + + D D++GT+   EL       G  L E  +  ++     D  G +D+  F 
Sbjct: 77  KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFI 135

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           +  ++         + +AF+  DKD +G       E+  + 
Sbjct: 136 SCLVRLDA------MFRAFKSLDKDGTGQIQVNIQEWLQLT 170

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
            + +V   D D  G + F EF  L  +I K +        ++  D +    I  +EL  A
Sbjct: 49  CRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ------AIYKQFDVDRSGTIGSSELPGA 102

Query: 413 FKENNMGDDATIKEIISEV 431
           F+      +  +  +I   
Sbjct: 103 FEAAGFHLNEHLYSMIIRR 121

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 98.4 bits (245), Expect = 4e-24
 Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 47/193 (24%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD---------V 262
           +  VE L  +    L ++F   D D +G +  DE+     ++  ++   D         V
Sbjct: 24  QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83

Query: 263 KQLMEAADMDGNGAIDYTEFTAATIQRQKLERS-----------EYLSKAFQYFDKDNSG 311
           +       ++    +   ++  A     + ER               +  +   D D  G
Sbjct: 84  RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143

Query: 312 Y---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI 368
               DE + M                  K F +       A    +K     D D +G +
Sbjct: 144 TVDVDELKTM-----------------MKAFDVPQE---AAYTFFEKA----DTDKSGKL 179

Query: 369 DFIEFVNLMTDIY 381
           +  E V+L    +
Sbjct: 180 ERTELVHLFRKFW 192

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 78.3 bits (193), Expect = 5e-17
 Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 28/152 (18%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
           L K F  FD D+ G    DE     +                +     + +  +  + ++
Sbjct: 38  LYKRFDTFDLDSDGKMEMDEVLYWPDR-------------MRQLVNATDEQVEKMRDAVR 84

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLE-----------TPELLEKAFQYLDKNSDQF 403
              L   ++    +   ++V       + E              L    +  LD + D  
Sbjct: 85  VFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGT 144

Query: 404 ITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           + V+EL+T  K  ++           +   D 
Sbjct: 145 VDVDELKTMMKAFDV-PQEAAYTFFEKADTDK 175

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 262
                +   +      P          +  +D D +GT+  DEL+  +      + +   
Sbjct: 107 NRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAA 164

Query: 263 KQLMEAADMDGNGAIDYTEFTAA 285
               E AD D +G ++ TE    
Sbjct: 165 YTFFEKADTDKSGKLERTELVHL 187

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 97.1 bits (242), Expect = 6e-24
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 43/180 (23%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--LTEFDVKQLMEA---------A 269
              Q +K  F  +D DK+G ++  +  +   +      +     K LM++          
Sbjct: 3   LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62

Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSE-----YLSKAFQYFDKDNSGY---DEFRAMVES 321
            + G   ID T F  +  +  K   ++      L   F+  D +       DE+      
Sbjct: 63  AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIF--- 119

Query: 322 PQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
                             GL  T    A      +    D + +G +   EFV   +D +
Sbjct: 120 --------------FGMLGLDKTM---APASFDAI----DTNNDGLLSLEEFVIAGSDFF 158

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 81.7 bits (202), Expect = 1e-18
 Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%)

Query: 288 QRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
             QK++        F   D D  G     +F +M E               AK+  +   
Sbjct: 4   WVQKMKT------YFNRIDFDKDGAITRMDFESMAER-------------FAKESEMKAE 44

Query: 345 KQFRAMNMLKKLV--LQGDIDGNGNIDFIEFVNLMTDIYKLETPE-----LLEKAFQYLD 397
                M+ L  +       + G   ID   F+N M ++ K    +      L   F+ +D
Sbjct: 45  HAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVD 104

Query: 398 KNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
            N D  I+ +E    F    + D          +  ++
Sbjct: 105 TNEDNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNN 141

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 96.0 bits (239), Expect = 2e-23
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 41/192 (21%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML---------TEFDVKQLMEAADM 271
              + +K +   +D   +G +S ++      ++  +          T  +  ++ +   +
Sbjct: 11  YHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGL 70

Query: 272 DGNGAIDYTEFTAATIQRQKLERSE-------YLSKAFQYFDKDNSGY---DEFRAMVES 321
                I   E            + E            +   D D  GY    EF+A    
Sbjct: 71  APGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAF--- 127

Query: 322 PQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
                          +  G   T   +A+     L    D + NG I   EF+  + D  
Sbjct: 128 --------------LQAVGPDLTDD-KAITCFNTL----DFNKNGQISRDEFLVTVNDFL 168

Query: 382 KLETPELLEKAF 393
                  L  AF
Sbjct: 169 FGLEETALANAF 180

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 96.4 bits (240), Expect = 2e-23
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDG 273
           VE L   E     +KF  M    +G L+  E +        S      V+Q+ E  D + 
Sbjct: 8   VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65

Query: 274 NGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSH 330
           +G ID+ E+ AA     K +  + L   F+ +D D +G     E   ++++ + I   + 
Sbjct: 66  DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125

Query: 331 IYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLE 390
             T +                +  K+    DI+G+G +   EF+  +      +   LL+
Sbjct: 126 AMTAEE-----------FTNMVFDKI----DINGDGELSLEEFMEGV-----QKDEVLLD 165

Query: 391 KAFQYLD 397
              + LD
Sbjct: 166 ILTRSLD 172

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK----EN 416
           D + +G IDF+E+V  ++ + K +  + L   F+  D + +  I   EL    K     N
Sbjct: 62  DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAIN 121

Query: 417 NMGDDATIKEIISEV 431
              +  T +E  + V
Sbjct: 122 RCNEAMTAEEFTNMV 136

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 98.1 bits (245), Expect = 4e-23
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 13/155 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLS 84
           + FG++LG G F    L  E +T+  YA K + K+   K         + RE   R ++S
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRE---RDVMS 85

Query: 85  --GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+  
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            H  G++HRDLKPEN   I  +++  +++TDFG+A
Sbjct: 146 LHGKGIIHRDLKPEN---ILLNEDMHIQITDFGTA 177

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 94.0 bits (234), Expect = 6e-23
 Identities = 31/184 (16%), Positives = 49/184 (26%), Gaps = 49/184 (26%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML---------------TEFDVKQL 265
           E  + +  +F   D D NG +   +       + +                  E   + L
Sbjct: 1   EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60

Query: 266 MEAADMDGNGAIDYTEFTAATIQRQKLERSE-------YLSKAFQYFDKDNSGY---DEF 315
              AD DG+  I   EF    ++R + +          +L  A    D D  G     + 
Sbjct: 61  AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120

Query: 316 RAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN 375
                                  FG+       A      L    D DG+G +   E V 
Sbjct: 121 ARA-----------------LTAFGVPEDL---ARQAAAAL----DTDGDGKVGETEIVP 156

Query: 376 LMTD 379
               
Sbjct: 157 AFAR 160

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 83.2 bits (206), Expect = 4e-19
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 18/153 (11%)

Query: 293 ERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           E    ++  F  FD+D +G+    +F          + +   +   A+    G      A
Sbjct: 1   EYERRIAARFTTFDQDGNGHIDRSDFSGA------AKAMLAEFGVAARS-DRGQALYGGA 53

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE-------LLEKAFQYLDKNSDQ 402
             + + L    D DG+  I   EFV       + +           L  A    D + D 
Sbjct: 54  EALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDG 113

Query: 403 FITVNELETAFKENNMGDDATIKEIISEVGRDH 435
            +TV +   A     +  +   ++  + +  D 
Sbjct: 114 AVTVADTARALTAFGV-PEDLARQAAAALDTDG 145

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           +         L       DTD +G ++  +    LT  G  + E   +Q   A D DG+G
Sbjct: 90  DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147

Query: 276 AIDYTEFTAA 285
            +  TE   A
Sbjct: 148 KVGETEIVPA 157

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 99.2 bits (247), Expect = 2e-22
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 4/155 (2%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSGQPNI 89
           R++GRG FG  Y C +  T   YA K + KK  KMK  E   +  R +         P I
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           V +  A      +  +++L  GGDL   +   G +SE D       I+  +   H+  V+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           +RDLKP N   I  D++  ++++D G A  F ++ 
Sbjct: 315 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKK 346

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 93.3 bits (232), Expect = 2e-22
 Identities = 32/202 (15%), Positives = 58/202 (28%), Gaps = 46/202 (22%)

Query: 210 TVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQ 264
             K+  ++         K  F  +D + NG +S DE+    + +     G+   +    +
Sbjct: 2   NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61

Query: 265 LMEAADMDGNG-----AIDYTEFTAATIQRQKLERS-----------EYLSKAFQYFDKD 308
               A   G G       D+  +     +    E              +    F   DKD
Sbjct: 62  DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121

Query: 309 NSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGN 365
            +G    DE++A                   K  G+  + +       +      DID +
Sbjct: 122 QNGAITLDEWKAY-----------------TKAAGIIQSSE-DCEETFRVC----DIDES 159

Query: 366 GNIDFIEFVNLMTDIYKLETPE 387
           G +D  E        +    P 
Sbjct: 160 GQLDVDEMTRQHLGFWYTMDPA 181

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 63.3 bits (154), Expect = 6e-12
 Identities = 19/86 (22%), Positives = 35/86 (40%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 262
             KL    ++   +  P          F  +D D+NG ++ DE +A     G + +  D 
Sbjct: 88  WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDC 147

Query: 263 KQLMEAADMDGNGAIDYTEFTAATIQ 288
           ++     D+D +G +D  E T   + 
Sbjct: 148 EETFRVCDIDESGQLDVDEMTRQHLG 173

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 51/196 (26%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKQLMEA-------- 268
             +  LK++F   D D NG L   +       +    G      +V+ L  A        
Sbjct: 4   IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63

Query: 269 ---ADMDGNGAIDYTEFTAATIQRQKLERSE--------YLSKAFQYFDKDNSGY---DE 314
              A +  +G++   +F   T      +            +       DK+  G    DE
Sbjct: 64  AKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE 123

Query: 315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
           F A                      G+       A     ++    D +GNG +   E +
Sbjct: 124 FAAW-----------------LTALGMSKA---EAAEAFNQV----DTNGNGELSLDELL 159

Query: 375 NLMTDIYKLET-PELL 389
             + D +      ELL
Sbjct: 160 TAVRDFHFGRLDVELL 175

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 82.1 bits (203), Expect = 1e-18
 Identities = 25/154 (16%), Positives = 51/154 (33%), Gaps = 19/154 (12%)

Query: 293 ERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
             S+ L K F  +D D +G     +F    +    I          A+   L N      
Sbjct: 4   IASDRLKKRFDRWDFDGNGALERADFEKEAQ---HIAEAFGKDAGAAEVQTLKNAFGGLF 60

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE--------LLEKAFQYLDKNSD 401
             + K+      +  +G++   +F+ +  ++   +           +++      DKN+D
Sbjct: 61  DYLAKEA----GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNAD 116

Query: 402 QFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
             I  +E         M   A   E  ++V  + 
Sbjct: 117 GQINADEFAAWLTALGM-SKAEAAEAFNQVDTNG 149

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 57.1 bits (138), Expect = 6e-10
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
                     +K      D + +G ++ DE  A LT +G  +++ +  +     D +GNG
Sbjct: 94  ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151

Query: 276 AIDYTEFTAA 285
            +   E   A
Sbjct: 152 ELSLDELLTA 161

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 89.6 bits (223), Expect = 2e-21
 Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 29/169 (17%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           +       E +  KE F  +D + +G +  D+LR     +G +  + +    M     + 
Sbjct: 15  VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEA 71

Query: 274 NGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
           +G I++T F T    + +  +  + +  AF+  D D  G              + +    
Sbjct: 72  SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLE------ELLTTGG 125

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             +T +                 +K +      D  GN+D+     ++T
Sbjct: 126 GRFTPEE----------------IKNMWAAFPPDVAGNVDYKNICYVIT 158

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
           AF   D++  G    D+ R    +                  G  N K       L  + 
Sbjct: 30  AFTVIDQNADGIIDKDDLRETFAA-----------------MGRLNVKN----EELDAM- 67

Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKEN 416
                + +G I+F  F+ +  +  K  +  +++  AF+ LD +    I  + LE      
Sbjct: 68  ---IKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT- 123

Query: 417 NMGD---DATIKEIISEVGRD 434
             G       IK + +    D
Sbjct: 124 -GGGRFTPEEIKNMWAAFPPD 143

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 90.7 bits (225), Expect = 4e-21
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 16/196 (8%)

Query: 186 EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE 245
           EA  + SV   ++      + + L +         +E Q L   F   +   +G ++ + 
Sbjct: 29  EAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGF--KNECPSGVVNEET 86

Query: 246 LRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQY 304
            +   ++             L  A D D NGA+ + +F        +    E L+ AF  
Sbjct: 87  FKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNL 146

Query: 305 FDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGD 361
           +D +  GY   +E   ++++            D   K      K+      ++    + D
Sbjct: 147 YDINKDGYITKEEMLDIMKA----------IYDMMGKCTYPVLKEDAPRQHVETFFQKMD 196

Query: 362 IDGNGNIDFIEFVNLM 377
            + +G +   EF+   
Sbjct: 197 KNKDGVVTIDEFIESC 212

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 338 KFGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
           K                  +    D D NG + F +F+  ++ + +    E L  AF   
Sbjct: 88  KEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLY 147

Query: 397 DKNSDQFITVNELETAFK---------ENNMGDDATIKEIISEV 431
           D N D +IT  E+    K            +  +   ++ +   
Sbjct: 148 DINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETF 191

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 88.7 bits (220), Expect = 7e-21
 Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 24/206 (11%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-F 260
           SKL+   ++ ++E       E Q   + F  +    +G LS +E +              
Sbjct: 6   SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63

Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
             + +    D +G+G ID+ EF  A     + +  + L  AF  +D D +GY    E   
Sbjct: 64  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +V++   + +      +        +T + R   + +++    D + +G +   EF+   
Sbjct: 124 IVQAIYKMVSSVMKMPED------ESTPEKRTEKIFRQM----DTNRDGKLSLEEFIRGA 173

Query: 378 TDIYKLETPELLEKAFQYLDKNSDQF 403
                   P ++ +  Q    ++ QF
Sbjct: 174 -----KSDPSIV-RLLQCDPSSAGQF 193

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 54/189 (28%)

Query: 255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG--- 311
           S L    ++ L+E+           T+FT   IQ           K F       SG   
Sbjct: 6   SKLRPEVMQDLLES-----------TDFTEHEIQE--------WYKGFL--RDCPSGHLS 44

Query: 312 YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI 371
            +EF+ +                    F  G+  +F      + +    D +G+G IDF 
Sbjct: 45  MEEFKKIY----------------GNFFPYGDASKF-----AEHVFRTFDANGDGTIDFR 83

Query: 372 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK---------ENNMGDDA 422
           EF+  ++   + +  + L+ AF   D + + +I+  E+    +              D++
Sbjct: 84  EFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 143

Query: 423 TIKEIISEV 431
           T ++   ++
Sbjct: 144 TPEKRTEKI 152

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 26/171 (15%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM 271
             ++  LP ++ Q +KE F  +D D++G +S ++++A   ++G    + ++  +++    
Sbjct: 6   SGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK---- 61

Query: 272 DGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRN 327
           +  G +++T F +  + +    +  E +  AF  FD+  +     +  + +         
Sbjct: 62  EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDL--------- 112

Query: 328 VSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                    +  G    K       ++    +  ++G G  D+++F  ++ 
Sbjct: 113 --------LENMGDNFNKDE-----MRMTFKEAPVEG-GKFDYVKFTAMIK 149

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 57.1 bits (139), Expect = 4e-10
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 35/141 (24%)

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
           AF   D D  G    ++ +A+ E                   G     +      L  ++
Sbjct: 23  AFSMIDVDRDGFVSKEDIKAISEQ-----------------LGRAPDDK-----ELTAML 60

Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKEN 416
                +  G ++F  F+++ +D       E  +  AF   D+   + + +  ++   +  
Sbjct: 61  K----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLEN- 115

Query: 417 NMGDDAT---IKEIISEVGRD 434
            MGD+     ++    E   +
Sbjct: 116 -MGDNFNKDEMRMTFKEAPVE 135

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 18/165 (10%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI----RRLLSG- 85
           +++GRG FG   L    ST   YA K ++K         +M+ R +       R +++  
Sbjct: 75  KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF--------EMIKRSDSAFFWEERDIMAFA 126

Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +V+L  A +D+  +++VME   GGDL   +++     E+ A      +V A++  H
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIH 185

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           SMG +HRD+KP+N   +  D +  LK+ DFG+ +   +EG    D
Sbjct: 186 SMGFIHRDVKPDN---MLLDKSGHLKLADFGTCMKMNKEGMVRCD 227

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 88.0 bits (218), Expect = 2e-20
 Identities = 42/204 (20%), Positives = 72/204 (35%), Gaps = 24/204 (11%)

Query: 201 RRMSKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 258
           +  SKL +  ++ +V       +E Q   + F       +G L+  E +    +      
Sbjct: 3   KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGD 60

Query: 259 E-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DE 314
                + +    D D NG ID+ EF  A     + E ++ L  AFQ +D DN+G    DE
Sbjct: 61  PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120

Query: 315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
              +V++         IY        L   +       + K+    D + +G +   EF 
Sbjct: 121 MLRIVDA---------IYKMVGSMVKLPEDED-TPEKRVNKIFNMMDKNKDGQLTLEEFC 170

Query: 375 NLMTDIYKLETPELLEKAFQYLDK 398
                      P ++  A    D 
Sbjct: 171 EGS-----KRDPTIV-SALSLYDG 188

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 13/88 (14%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK------ 414
           D D NG IDF EF+  ++   + E  + L  AFQ  D +++  I+ +E+           
Sbjct: 73  DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMV 132

Query: 415 -------ENNMGDDATIKEIISEVGRDH 435
                  E+    +  + +I + + ++ 
Sbjct: 133 GSMVKLPEDEDTPEKRVNKIFNMMDKNK 160

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 90.1 bits (224), Expect = 2e-20
 Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            D    Y+    +G+G  G  Y   + +T    A + M     ++      +I  EI + 
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVM 71

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R     PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+
Sbjct: 72  RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              HS  V+HRD+K +N   I    +  +K+TDFG  
Sbjct: 130 EFLHSNQVIHRDIKSDN---ILLGMDGSVKLTDFGFC 163

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            D  L       +G G  G+  L  E  +    A K M     ++  +   ++  E+ I 
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM----DLRKQQRRELLFNEVVIM 96

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R      N+VE+  ++     + V+ME  QGG L D I+++   +E   A V  A++ A+
Sbjct: 97  RDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQAL 154

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              H+ GV+HRD+K ++   I    +  +K++DFG
Sbjct: 155 AYLHAQGVIHRDIKSDS---ILLTLDGRVKLSDFG 186

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 85.2 bits (212), Expect = 4e-20
 Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 30/162 (18%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            + Q  KE F  +D +++G +  ++L   L  +G   T+  ++ +M     +  G I++T
Sbjct: 4   SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPINFT 59

Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
            F T    +    +  + +  AF  FD++ SG+   D  R      + +  +   +TD+ 
Sbjct: 60  MFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLR------ELLTTMGDRFTDEE 113

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                           + ++  +  ID  GN +++EF  ++ 
Sbjct: 114 ----------------VDEMYREAPIDKKGNFNYVEFTRILK 139

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 60.6 bits (148), Expect = 2e-11
 Identities = 27/142 (19%), Positives = 48/142 (33%), Gaps = 35/142 (24%)

Query: 300 KAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
           +AF   D++  G    ++   M+ S                   +G        N   + 
Sbjct: 11  EAFNMIDQNRDGFIDKEDLHDMLAS-------------------MG-------KNPTDEY 44

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKE 415
           +     +  G I+F  F+ +  +      PE ++  AF   D+ +  FI  + L      
Sbjct: 45  LEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLT- 103

Query: 416 NNMGDDAT---IKEIISEVGRD 434
             MGD  T   + E+  E   D
Sbjct: 104 -TMGDRFTDEEVDEMYREAPID 124

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 84.3 bits (209), Expect = 4e-20
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 196 RMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--- 252
            +  F             +V  L  +    +K+ F  +D DK+G +  DEL + L     
Sbjct: 14  AIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS 72

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
               L+  + K LM A D DG+G I   EF+ 
Sbjct: 73  DARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 26/129 (20%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L+  D+K+ + A       + D+ +F        K + ++ + K F   DKD SG+
Sbjct: 2   MTDLLSAEDIKKAIGAFTAAD--SFDHKKFFQMV--GLKKKSADDVKKVFHILDKDKSGF 57

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              DE  +++   +   + +   + K                  K L+  GD DG+G I 
Sbjct: 58  IEEDELGSIL---KGFSSDARDLSAKE----------------TKTLMAAGDKDGDGKIG 98

Query: 370 FIEFVNLMT 378
             EF  L+ 
Sbjct: 99  VEEFSTLVA 107

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                 + D  +F  ++    K ++ + ++K F  LDK+   FI  +EL +  K  +   
Sbjct: 17  AFTAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDA 74

Query: 420 ---DDATIKEIISEVGRD 434
                   K +++   +D
Sbjct: 75  RDLSAKETKTLMAAGDKD 92

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 89.3 bits (222), Expect = 5e-20
 Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQI 79
            D    ++    +G+G FG  +   +N T    A K +     ++ AE+++  I++EI +
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITV 73

Query: 80  RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
                  P + +   ++  +T + ++ME   GG   D ++  G   E   A +LR I+  
Sbjct: 74  LSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 131

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFE 181
           ++  HS   +HRD+K  N   +   ++  +K+ DFG +  L +
Sbjct: 132 LDYLHSEKKIHRDIKAAN---VLLSEHGEVKLADFGVAGQLTD 171

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 90.7 bits (225), Expect = 5e-20
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 30/169 (17%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           + L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363

Query: 276 AIDYTEFTAATIQRQKLERS--EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
            ID+ EF    + R+  +    E + +AF+ FDKD +GY        S   +R+V     
Sbjct: 364 TIDFPEFL-TMMARKMKDTDSEEEIREAFRVFDKDGNGY-------ISAAELRHV----- 410

Query: 334 DKAKKFGLGNTKQFRAMNM----LKKLVLQGDIDGNGNIDFIEFVNLMT 378
                 G           +    + +++ + DIDG+G +++ EFV +MT
Sbjct: 411 --MTNLG---------EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 82.6 bits (204), Expect = 3e-17
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 38/225 (16%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           +      +   ++      D     +  E++    +  +++   ++K +    D   +G 
Sbjct: 240 FFKSAMPEGYIQERTIFFKDDGNYKTRAEVK---FEGDTLVNRIELKGI----DFKEDGN 292

Query: 277 IDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYT 333
           I   +    T  +   E+     +AF  FDKD  G     E   ++ S            
Sbjct: 293 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS------------ 340

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-LEKA 392
                 G   T+       L+ ++ + D DGNG IDF EF+ +M    K    E  + +A
Sbjct: 341 -----LGQNPTEA-----ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA 390

Query: 393 FQYLDKNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
           F+  DK+ + +I+  EL        +G+  T   + E+I E   D
Sbjct: 391 FRVFDKDGNGYISAAELRHVMTN--LGEKLTDEEVDEMIREADID 433

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 85.1 bits (211), Expect = 8e-20
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 45/193 (23%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKQLMEAADMDGNGAIDYT 280
           L   F      ++G +  DEL+  LT+ G       F+    + ++   D D +G + + 
Sbjct: 4   LYGYF-ASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAK 337
           EF                 + F  FD D SG     E +  + +                
Sbjct: 63  EFKELWAVLNGWR------QHFISFDSDRSGTVDPQELQKALTT---------------- 100

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLD 397
             G     Q      +  +        +G I F +++     +        L  +F+  D
Sbjct: 101 -MGFRLNPQT-----VNSIAK--RYSTSGKITFDDYIACCVKL------RALTDSFRRRD 146

Query: 398 KNSDQFITVNELE 410
                 +  +  +
Sbjct: 147 SAQQGMVNFSYDD 159

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 62.8 bits (153), Expect = 6e-12
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
              ++ FI  D+D++GT+   EL+  LT +G  L    V  + +     G   I + ++ 
Sbjct: 72  NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDYI 129

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           A  ++ +       L+ +F+  D    G     YD+F   V
Sbjct: 130 ACCVKLRA------LTDSFRRRDSAQQGMVNFSYDDFIQCV 164

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           + +V   D D +G + F EF  L   +          + F   D +    +   EL+ A 
Sbjct: 45  RLMVSMLDRDMSGTMGFNEFKELWAVLNGWR------QHFISFDSDRSGTVDPQELQKAL 98

Query: 414 KENNMG-DDATIKEIISEVGRDHK 436
                  +  T+  I        K
Sbjct: 99  TTMGFRLNPQTVNSIAKRYSTSGK 122

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 89.8 bits (223), Expect = 1e-19
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQ-PN 88
           +++GRG FG   +    + +  +A K + K   +K AE       R++    L++G    
Sbjct: 80  KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV----LVNGDSKW 135

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIVNAVNVCHSMG 147
           I  L  A +D+  +++VM+   GGDL   +   +    E  A   L  +V A++  H + 
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            +HRD+KP+N   I  D N  +++ DFGS L   E+G
Sbjct: 196 YVHRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDG 229

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 88.3 bits (219), Expect = 1e-19
 Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 14/175 (8%)

Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
             Y + +   +    +GRG FG  +   +  T    A K +           ++    E+
Sbjct: 51  YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV---------RLEVFRVEEL 101

Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
                LS  P IV L  A  +   V++ MEL +GG L   I   G   E  A   L   +
Sbjct: 102 VACAGLS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 160

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDN-ALLKVTDFGSALLFEEEGGEASDDT 191
             +   H+  ++H D+K +N   +    + +   + DFG AL  + +G   S  T
Sbjct: 161 EGLEYLHTRRILHGDVKADN---VLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 85.2 bits (211), Expect = 2e-19
 Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 45/201 (22%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKQLMEAADMD 272
            PG+    L   F      ++G +  DEL+  LT+ G       F+    + ++   D D
Sbjct: 27  FPGQTQDPLYGYF-AAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 85

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
            +G + + EF                 + F  FD D SG     E +  + +        
Sbjct: 86  MSGTMGFNEFKELWAVLNG------WRQHFISFDTDRSGTVDPQELQKALTT-------- 131

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
                     G   + Q      +  +  +     NG I F +++     +        L
Sbjct: 132 ---------MGFRLSPQA-----VNSIAKR--YSTNGKITFDDYIACCVKL------RAL 169

Query: 390 EKAFQYLDKNSDQFITVNELE 410
             +F+  D      +     +
Sbjct: 170 TDSFRRRDTAQQGVVNFPYDD 190

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
              ++ FI  DTD++GT+   EL+  LT +G  L+   V  + +      NG I + ++ 
Sbjct: 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYI 160

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           A  ++ +       L+ +F+  D    G     YD+F   V
Sbjct: 161 ACCVKLRA------LTDSFRRRDTAQQGVVNFPYDDFIQCV 195

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 11/84 (13%)

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF 413
           + +V   D D +G + F EF  L   +          + F   D +    +   EL+ A 
Sbjct: 76  RLMVSMLDRDMSGTMGFNEFKELWAVLNG------WRQHFISFDTDRSGTVDPQELQKAL 129

Query: 414 KENNMG---DDATIKEIISEVGRD 434
               MG       +  I      +
Sbjct: 130 TT--MGFRLSPQAVNSIAKRYSTN 151

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 26/176 (14%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P     + Y+  +++G G FGV Y      +    A K + +  + K         RE+Q
Sbjct: 48  PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQ 99

Query: 79  IRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
           I R L    NIV L+         +DE  +++V++      ++ R+  + Y   +   PV
Sbjct: 100 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVA-RHYSRAKQTLPV 155

Query: 133 LRA------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +        +  ++   HS G+ HRD+KP+N   +   D A+LK+ DFGSA     
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL-LDP-DTAVLKLCDFGSAKQLVR 209

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 189 DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA 248
             + +   ++  +            I   +  + +  LKE F  +D D++G +  DEL+ 
Sbjct: 7   SPSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKY 65

Query: 249 GLTKVGSM---LTEFDVKQLMEAADMDGNGAIDYTEFTA 284
            L +  S    LT  + K  + AAD DG+G I   EF  
Sbjct: 66  FLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 28/129 (21%)

Query: 254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY- 312
             +L+  D+   +         +    +F   +   +K      L + F+  D D SG+ 
Sbjct: 3   TDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMSKKSS--SQLKEIFRILDNDQSGFI 58

Query: 313 --DEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
             DE +  +       R ++   T                   L       D DG+G I 
Sbjct: 59  EEDELKYFLQRFESGARVLTASETKT----------------FLA----AADHDGDGKIG 98

Query: 370 FIEFVNLMT 378
             EF  ++ 
Sbjct: 99  AEEFQEMVQ 107

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
           D     +    +F  +       ++   L++ F+ LD +   FI  +EL+   +    G 
Sbjct: 17  DCQAPDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGA 74

Query: 421 ----DATIKEIISEVGRD 434
                +  K  ++    D
Sbjct: 75  RVLTASETKTFLAAADHD 92

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 28/126 (22%)

Query: 257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---D 313
           L + DV   + A       +  + EF A      K    + + KAF   D+D SG+   D
Sbjct: 6   LKDADVAAALAACS--AADSFKHKEFFAKVGLASKSL--DDVKKAFYVIDQDKSGFIEED 61

Query: 314 EFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE 372
           E +  +     + R ++   T                   L      GD DG+G I   E
Sbjct: 62  ELKLFLQNFSPSARALTDAETKA----------------FLA----DGDKDGDGMIGVDE 101

Query: 373 FVNLMT 378
           F  ++ 
Sbjct: 102 FAAMIK 107

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                 +    EF   +      ++ + ++KAF  +D++   FI  +EL+   +  +   
Sbjct: 17  ACSAADSFKHKEFFAKV--GLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 74

Query: 420 ---DDATIKEIISEVGRDH 435
               DA  K  +++  +D 
Sbjct: 75  RALTDAETKAFLADGDKDG 93

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 226 LKEKFIEMDTDKNGTLSYDELR---AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           +K+ F  +D DK+G +  DEL+      +     LT+ + K  +   D DG+G I   EF
Sbjct: 43  VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102

Query: 283 TA 284
            A
Sbjct: 103 AA 104

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 88.1 bits (219), Expect = 3e-19
 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 13/162 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
           H+   R +G+G FG   +  +N T   YA K M K+   +     N   + +E    +++
Sbjct: 16  HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN---VFKE---LQIM 69

Query: 84  SG--QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            G   P +V L  + +DE  + +V++L  GGDL   +    ++ E      +  +V A++
Sbjct: 70  QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              +  ++HRD+KP+N   I  D++  + +TDF  A +   E
Sbjct: 130 YLQNQRIIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRE 168

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 87.7 bits (218), Expect = 3e-19
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLS 84
           +   + LG G FG   L     +   YA K + K+   K+K  E+      E   +R+L 
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH---TLNE---KRILQ 96

Query: 85  --GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               P +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV     
Sbjct: 97  AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            HS+ +++RDLKPEN   +  D    ++VTDFG A
Sbjct: 157 LHSLDLIYRDLKPEN---LLIDQQGYIQVTDFGFA 188

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI---RREIQIRRLL 83
           Y     LG G     YL  +   N+  A K++     +   E +  +    RE+     L
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREVHNSSQL 68

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           S   NIV +    E++   ++VME  +G  L + I + G  S   A      I++ +   
Sbjct: 69  S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           H M ++HRD+KP+N   I  +     K+ DFG A
Sbjct: 128 HDMRIVHRDIKPQNI-LIDSNKTL--KIFDFGIA 158

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 87.6 bits (217), Expect = 3e-19
 Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 7/161 (4%)

Query: 35  RGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS 94
              +  T              K  +    +           +I+     S   N V    
Sbjct: 70  FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQLQ 128

Query: 95  AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA---IVNAVNVCHSMGVMHR 151
               +  +++ M+LC+  +L D +  +    +R+    L     I  AV   HS G+MHR
Sbjct: 129 PSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHR 188

Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
           DLKP N  F + DD   +KV DFG     +++  E +  T 
Sbjct: 189 DLKPSN-IFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTP 226

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           +  +   + +GRG FGV +       +  YA K +    +    E    + RE++    L
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK---VMREVKALAKL 61

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQ 110
              P IV   +A  +        E+ +
Sbjct: 62  E-HPGIVRYFNAWLETPPEKWQEEMDE 87

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 81.9 bits (203), Expect = 3e-19
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM---LTEFDVKQLMEAADMDGN 274
           L       +K+ F  +D D++G L  DEL+  L K  S    LTE + K LM+AAD DG+
Sbjct: 35  LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94

Query: 275 GAIDYTEFTA 284
           G I   EF  
Sbjct: 95  GKIGADEFQE 104

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 26/129 (20%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L+  D+   ++          +  +F   +        +  +   F++ D D SGY
Sbjct: 2   ITDILSAEDIAAALQECQDPDT--FEPQKFFQTS--GLSKMSASQVKDIFRFIDNDQSGY 57

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              DE +  +   Q  ++ +   T+                   K L+   D DG+G I 
Sbjct: 58  LDGDELKYFL---QKFQSDARELTESE----------------TKSLMDAADNDGDGKIG 98

Query: 370 FIEFVNLMT 378
             EF  ++ 
Sbjct: 99  ADEFQEMVH 107

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 7/79 (8%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG 419
            +       +  +F           +   ++  F+++D +   ++  +EL+   ++    
Sbjct: 16  QECQDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSD 73

Query: 420 ----DDATIKEIISEVGRD 434
                ++  K ++     D
Sbjct: 74  ARELTESETKSLMDAADND 92

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 87.8 bits (218), Expect = 3e-19
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 27/188 (14%)

Query: 7   KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY 66
               +     GK  E   + Y+  +++G G FGV +      ++   A K + +  + K 
Sbjct: 22  NKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN 80

Query: 67  AENDMMIRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLFDRIIA 120
                   RE+QI R++   PN+V+LK         +DE  +++V+E      ++ R   
Sbjct: 81  --------RELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVY-RAS- 128

Query: 121 KGYYSERDAAPVLRA------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF 174
           + Y   +   P+L        ++ ++   HS+G+ HRD+KP+N   +    + +LK+ DF
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL-LDP-PSGVLKLIDF 186

Query: 175 GSALLFEE 182
           GSA +   
Sbjct: 187 GSAKILIA 194

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 87.8 bits (218), Expect = 5e-19
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI----RRLLSG- 85
           +++GRG F    +     T   YA K M K         DM+ R E+      R +L   
Sbjct: 67  KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW--------DMLKRGEVSCFREERDVLVNG 118

Query: 86  -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVC 143
            +  I +L  A +DE  +++VME   GGDL   +   G       A   L  IV A++  
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           H +G +HRD+KP+N   I  D    +++ DFGS L    +G   S 
Sbjct: 179 HRLGYVHRDIKPDN---ILLDRCGHIRLADFGSCLKLRADGTVRSL 221

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 86.3 bits (214), Expect = 6e-19
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 11/158 (6%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           +     +     LG G +G  Y      T    A K      ++    +   I +EI I 
Sbjct: 25  KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK------QVPVESDLQEIIKEISIM 78

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNA 139
           +     P++V+   ++   T + +VME C  G + D I +     +E + A +L++ +  
Sbjct: 79  QQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +   H M  +HRD+K  N   I  +     K+ DFG A
Sbjct: 138 LEYLHFMRKIHRDIKAGN---ILLNTEGHAKLADFGVA 172

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 83.7 bits (207), Expect = 7e-19
 Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 43/193 (22%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
                L  +F  +D +K G LS  +L+    ++G++       +++E+   DG+  +D+ 
Sbjct: 26  ASLLRLHHRFRALDRNKKGYLSRMDLQ----QIGALAVNPLGDRIIESFFPDGSQRVDFP 81

Query: 281 EFTAATIQRQKLE-----------------RSEYLSKAFQYFDKDNSGY---DEFRAMVE 320
            F       + +E                 R   L  AFQ +D D  G     E   ++ 
Sbjct: 82  GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLR 141

Query: 321 SPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--T 378
                  V    T++               N+  + V + D DG+G + F+EF   +   
Sbjct: 142 L-----MVGVQVTEEQ------------LENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184

Query: 379 DIYKLETPELLEK 391
           D+ +  +  +L+ 
Sbjct: 185 DVEQKMSIRILKH 197

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 62/183 (33%)

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
           T F+ A++ R        L   F+  D++  GY    + + +                  
Sbjct: 21  TGFSQASLLR--------LHHRFRALDRNKKGYLSRMDLQQIGA---------------- 56

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETP--------- 386
                       A+N L   +++    DG+  +DF  FV ++     +E           
Sbjct: 57  -----------LAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKK 105

Query: 387 --------ELLEKAFQYLDKNSDQFITVNELETAFKE---NNMGDD---ATIKEIISEVG 432
                     L  AFQ  D + D  I+ +E+    +      + ++         + E  
Sbjct: 106 PEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEAD 165

Query: 433 RDH 435
            D 
Sbjct: 166 EDG 168

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 80.7 bits (200), Expect = 7e-19
 Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 28/130 (21%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L   D+ + +        G  DY  F      + K +    + + F+  DKD SG+
Sbjct: 2   MTKVLKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGKTD--AQVKEVFEILDKDQSGF 57

Query: 313 ---DEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI 368
              +E +  +       R+++   T                  +L      GD D +G I
Sbjct: 58  IEEEELKGVLKGFSAHGRDLNDTETKA----------------LLA----AGDSDHDGKI 97

Query: 369 DFIEFVNLMT 378
              EF  ++ 
Sbjct: 98  GADEFAKMVA 107

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                G  D+  F +L+    K +T   +++ F+ LDK+   FI   EL+   K  +   
Sbjct: 17  AFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74

Query: 420 ---DDATIKEIISEVGRDH 435
              +D   K +++    DH
Sbjct: 75  RDLNDTETKALLAAGDSDH 93

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 226 LKEKFIEMDTDKNGTLSYDELR---AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           +KE F  +D D++G +  +EL+    G +  G  L + + K L+ A D D +G I   EF
Sbjct: 43  VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102

Query: 283 TA 284
             
Sbjct: 103 AK 104

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 85.8 bits (213), Expect = 7e-19
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI---RREIQIRRL 82
            Y   R++GRG  G  Y   +       A K M        + + +     +RE +    
Sbjct: 35  PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLM----SETLSSDPVFRTRMQREARTAGR 90

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L  +P++V +    E +  ++V M L  G DL   +  +G  +   A  ++R I +A++ 
Sbjct: 91  LQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA 149

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            H+ G  HRD+KPEN   +S DD A   + DFG A
Sbjct: 150 AHAAGATHRDVKPENI-LVSADDFA--YLVDFGIA 181

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 85.4 bits (212), Expect = 8e-19
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 9/158 (5%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            D    +     LG G FG  Y      T    A K +  K + +  +       EI+I 
Sbjct: 15  LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED----YIVEIEIL 70

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNA 139
                 P IV+L  A+  +  + +++E C GG +   +       +E     V R ++ A
Sbjct: 71  ATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +N  HS  ++HRDLK  N   +       +++ DFG +
Sbjct: 130 LNFLHSKRIIHRDLKAGN---VLMTLEGDIRLADFGVS 164

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 11/175 (6%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQP 87
            G +LG+G FG     T   T        M  K  +++ E       +E+++ R L   P
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEV-----MVMKELIRFDEETQRTFLKEVKVMRCLE-HP 67

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           N+++       +  ++ + E  +GG L   I      Y         + I + +   HSM
Sbjct: 68  NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFR 201
            ++HRDL   N C +   +N  + V DFG A L  +E  +     S+    ++ R
Sbjct: 128 NIIHRDLNSHN-CLV--RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 78.4 bits (194), Expect = 1e-18
 Identities = 19/60 (31%), Positives = 36/60 (60%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
            +  F E+D + +G +SY+E++A ++K  ++  E  ++ + ++ D DGNG ID  EF   
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 262 VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAM 318
            + L +  D++G+GA+ Y E  A   +++ ++  + L   F+  D D +G    +EF   
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 319 VESPQ 323
             S Q
Sbjct: 62  YGSIQ 66

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 13/63 (20%), Positives = 31/63 (49%)

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
           M + L  + D++G+G + + E    ++    ++  +LL+  F+ +D + +  I  NE   
Sbjct: 1   MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60

Query: 412 AFK 414
            + 
Sbjct: 61  FYG 63

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 20/86 (23%), Positives = 28/86 (32%), Gaps = 25/86 (29%)

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
               F+  D +  G   Y+E +A V                  K      +Q     +L+
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFV-----------------SKKRAIKNEQ-----LLQ 39

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDI 380
            +    D DGNG ID  EF      I
Sbjct: 40  LIFKSIDADGNGEIDQNEFAKFYGSI 65

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 18/175 (10%)

Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRR 75
             P+      Y    ++G G   V             A K +     ++  +  M  + +
Sbjct: 7   ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI----NLEKCQTSMDELLK 62

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD--------RIIAKGYYSER 127
           EIQ        PNIV   ++   +  + +VM+L  GG + D             G   E 
Sbjct: 63  EIQAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121

Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFE 181
             A +LR ++  +   H  G +HRD+K  N   I   ++  +++ DFG SA L  
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGN---ILLGEDGSVQIADFGVSAFLAT 173

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 16/165 (9%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            D    +    ++G G +G  Y      T    A K M         + +  I++EI + 
Sbjct: 20  RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINML 74

Query: 81  RLLSGQPNIVEL------KSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSERDAAPV 132
           +  S   NI         K+    +  + +VME C  G + D  +        E   A +
Sbjct: 75  KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134

Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            R I+  ++  H   V+HRD+K +N   +   +NA +K+ DFG +
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQN---VLLTENAEVKLVDFGVS 176

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLS 84
           +   R LG G FG  +L         YA K + K+   ++K  E+      E   R +LS
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH---TNDE---RLMLS 61

Query: 85  G--QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
               P I+ +    +D   + ++M+  +GG+LF  +     +    A      +  A+  
Sbjct: 62  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            HS  +++RDLKPEN   I  D N  +K+TDFG
Sbjct: 122 LHSKDIIYRDLKPEN---ILLDKNGHIKITDFG 151

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 86.8 bits (215), Expect = 2e-18
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 11/149 (7%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPN 88
           R+LG+G FG    C   +T   YACK + KK   K     M    E   +++L       
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNE---KQILEKVNSRF 245

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRI--IAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           +V L  A+E + A+ +V+ L  GGDL   I  + +  + E  A      I   +   H  
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++RDLKPEN   I  DD+  ++++D G
Sbjct: 306 RIVYRDLKPEN---ILLDDHGHIRISDLG 331

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 26/128 (20%)

Query: 254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY- 312
             +L + DV   ++A +     + +Y  F A      K    + + KAF   D+D SG+ 
Sbjct: 4   SGILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSA--DDIKKAFFVIDQDKSGFI 59

Query: 313 --DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF 370
             DE +  +   Q     +   TD                   K  +  GD DG+G I  
Sbjct: 60  EEDELKLFL---QVFSAGARALTDAE----------------TKAFLKAGDSDGDGAIGV 100

Query: 371 IEFVNLMT 378
            E+  L+ 
Sbjct: 101 DEWAALVK 108

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
             +   + ++  F   +    K    + ++KAF  +D++   FI  +EL+   +  + G 
Sbjct: 18  ACEAADSFNYKAFFAKVGLTAKSA--DDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGA 75

Query: 420 ---DDATIKEIISEVGRDH 435
               DA  K  +     D 
Sbjct: 76  RALTDAETKAFLKAGDSDG 94

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELR---AGLTKVGSMLTEFDVKQLMEAADMDGN 274
           L  +    +K+ F  +D DK+G +  DEL+      +     LT+ + K  ++A D DG+
Sbjct: 36  LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95

Query: 275 GAIDYTEFTA 284
           GAI   E+ A
Sbjct: 96  GAIGVDEWAA 105

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 30/168 (17%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
                ++E F   D D +G +S +EL + L  +G   T  ++  +    +       D  
Sbjct: 2   ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLA 58

Query: 281 EFTA--ATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDK 335
            F        +   E+S+ +  AF+  DK+ +G     E R +      + N+    T  
Sbjct: 59  TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQL------LLNLGDALTSS 112

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL 383
                            +++L+ +  + G+G I++  FV+++   Y L
Sbjct: 113 E----------------VEELMKEVSVSGDGAINYESFVDMLVTGYPL 144

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query: 219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAID 278
           P E+++ + + F  +D + NGT+   ELR  L  +G  LT  +V++LM+   + G+GAI+
Sbjct: 71  PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAIN 130

Query: 279 YTEFT 283
           Y  F 
Sbjct: 131 YESFV 135

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 53.3 bits (129), Expect = 7e-09
 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 35/143 (24%)

Query: 300 KAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
           + FQ FDKDN G    +E  +       +R++    T+                  L  +
Sbjct: 9   ECFQIFDKDNDGKVSIEELGSA------LRSLGKNPTNA----------------ELNTI 46

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSDQFITVNELETAFK 414
             Q +       D   F  +     K  T   + +  AF+ LDK  +  I   EL     
Sbjct: 47  KGQLNAKE---FDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLL 103

Query: 415 ENNMGDDAT---IKEIISEVGRD 434
             N+GD  T   ++E++ EV   
Sbjct: 104 --NLGDALTSSEVEELMKEVSVS 124

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 84.6 bits (209), Expect = 5e-18
 Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 14/172 (8%)

Query: 20  YEDVMLHYSFGRMLGRGR--FGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRR 75
           +      Y    ++G+G        L     T      + +     ++   N+M+  ++ 
Sbjct: 20  FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI----NLEACSNEMVTFLQG 75

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSERDAAPVL 133
           E+ + +L +  PNIV  ++    +  + VV      G   D          +E   A +L
Sbjct: 76  ELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYIL 134

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
           + ++ A++  H MG +HR +K  +   I    +  + ++   S L     G 
Sbjct: 135 QGVLKALDYIHHMGYVHRSVKASH---ILISVDGKVYLSGLRSNLSMISHGQ 183

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 84.8 bits (210), Expect = 6e-18
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 13/151 (8%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPN 88
           R+LGRG FG  + C   +T   YACK + KK   K          E   +++L+      
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVE---KKILAKVHSRF 246

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR----AIVNAVNVCH 144
           IV L  A E +T + +VM +  GGD+   I      +     P        IV+ +   H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              +++RDLKPEN   +  DD+  ++++D G
Sbjct: 307 QRNIIYRDLKPEN---VLLDDDGNVRISDLG 334

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 81.0 bits (200), Expect = 7e-18
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 42/198 (21%)

Query: 201 RRMSKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 258
           R  + L+   ++ I +       +   L  +F  +D  +NGTLS ++ +       + L 
Sbjct: 4   RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63

Query: 259 EFDVKQLMEAADMDGNGAIDYTEFTAA----------------TIQRQKLERSEYLSKAF 302
           +    +++ A   +G   +++  F                           RS  L  AF
Sbjct: 64  D----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119

Query: 303 QYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           + +D D       DE   ++        V    +D+               ++  + + +
Sbjct: 120 RLYDLDKDDKISRDELLQVLRM-----MVGVNISDEQ------------LGSIADRTIQE 162

Query: 360 GDIDGNGNIDFIEFVNLM 377
            D DG+  I F EFV ++
Sbjct: 163 ADQDGDSAISFTEFVKVL 180

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 72/210 (34%)

Query: 252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
           +  ++L + +++++ +            T F+ + I R        L   F   DK  +G
Sbjct: 4   RASTLLRDEELEEIKKE-----------TGFSHSQITR--------LYSRFTSLDKGENG 44

Query: 312 Y---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG-DIDGNGN 367
               ++F+ + E                            A+N L   ++     +G   
Sbjct: 45  TLSREDFQRIPEL---------------------------AINPLGDRIINAFFSEGEDQ 77

Query: 368 IDFIEFVNLMTDIYKLETPEL----------------LEKAFQYLDKNSDQFITVNELET 411
           ++F  F+  +     +E  E                 L  AF+  D + D  I+ +EL  
Sbjct: 78  VNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQ 137

Query: 412 AFKEN---NMGDD---ATIKEIISEVGRDH 435
             +     N+ D+   +     I E  +D 
Sbjct: 138 VLRMMVGVNISDEQLGSIADRTIQEADQDG 167

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 17/147 (11%)

Query: 156 ENFCFISRDDNALLKVTDFGSAL------LFEEEGGEASDDTSVILRMKQFRR-MSKLKK 208
             F  + + +N  L   DF          L +        +    +  + F R ++  + 
Sbjct: 33  SRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRP 92

Query: 209 LTVKVIVEYLPGEETQALKEKFIEM-----DTDKNGTLSYDELRAGLTK-VGSMLTEFDV 262
           +      + + G E    +   +       D DK+  +S DEL   L   VG  +++  +
Sbjct: 93  IEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQL 152

Query: 263 KQL----MEAADMDGNGAIDYTEFTAA 285
             +    ++ AD DG+ AI +TEF   
Sbjct: 153 GSIADRTIQEADQDGDSAISFTEFVKV 179

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 83.2 bits (206), Expect = 8e-18
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 5/157 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           +D    +S  R +G G FG  Y   +   +   A K M+   K    E    I +E++  
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDIIKEVRFL 108

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           + L   PN ++ +  +  E    +VME C G       + K    E + A V    +  +
Sbjct: 109 QKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
              HS  ++HRD+K  N   I   +  L+K+ DFGSA
Sbjct: 168 AYLHSHNMIHRDVKAGN---ILLSEPGLVKLGDFGSA 201

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 78.8 bits (195), Expect = 1e-17
 Identities = 30/170 (17%), Positives = 60/170 (35%), Gaps = 33/170 (19%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD--GNG 275
              ++ +  KE F   D   +G + Y +    +  +G   T  +V +++     D   + 
Sbjct: 4   FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63

Query: 276 AIDYTEFTAATIQRQKLERSEY----LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNV 328
            +D+  F    +Q     R +       + F+ FDK+ +G     E R ++ +       
Sbjct: 64  RVDFETFLPM-LQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT------- 115

Query: 329 SHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                       LG       +  +    L G  D NG I++  F+  + 
Sbjct: 116 ------------LGEKMTEEEVETV----LAGHEDSNGCINYEAFLKHIL 149

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 53.4 bits (129), Expect = 9e-09
 Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 40/140 (28%)

Query: 300 KAFQYFDKDNSG---YDE----FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           +AF+ FD+   G   Y +     RA+ ++P                     T        
Sbjct: 14  EAFELFDRVGDGKILYSQCGDVMRALGQNP---------------------TNA-----E 47

Query: 353 LKKLVLQGDID--GNGNIDFIEFVNLMTDIYKLE---TPELLEKAFQYLDKNSDQFITVN 407
           + K++     D   +  +DF  F+ ++  + K     T E   + F+  DK  +  +   
Sbjct: 48  VLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGA 107

Query: 408 ELETAFKENNMGDDATIKEI 427
           EL        +G+  T +E+
Sbjct: 108 ELRHVLT--TLGEKMTEEEV 125

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 45/194 (23%)

Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKQLMEAADMDGNGAIDY 279
           ++   F      ++G +  +EL+  LT+ G   T   F     + ++   D D  G + +
Sbjct: 1   SVYTYF-SAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGF 59

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
             F          +      + F   D+D SG     E R  +                 
Sbjct: 60  NAFKELWAALNAWK------ENFMTVDQDGSGTVEHHELRQAIGL--------------- 98

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
               +G     + +  + K         NG I F ++V     +        L   F+  
Sbjct: 99  ----MGYRLSPQTLTTIVK-----RYSKNGRIFFDDYVACCVKL------RALTDFFRKR 143

Query: 397 DKNSDQFITVNELE 410
           D            +
Sbjct: 144 DHLQQGSANFIYDD 157

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
            A KE F+ +D D +GT+ + ELR  +  +G  L+   +  +++      NG I + ++ 
Sbjct: 70  NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYV 127

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           A  ++ +       L+  F+  D    G     YD+F    
Sbjct: 128 ACCVKLRA------LTDFFRKRDHLQQGSANFIYDDFLQGT 162

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 11/79 (13%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
           D D  G + F  F  L   +         ++ F  +D++    +  +EL  A     MG 
Sbjct: 50  DRDHTGKMGFNAFKELWAALNA------WKENFMTVDQDGSGTVEHHELRQAIGL--MGY 101

Query: 420 --DDATIKEIISEVGRDHK 436
                T+  I+    ++ +
Sbjct: 102 RLSPQTLTTIVKRYSKNGR 120

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 76.6 bits (189), Expect = 1e-17
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 200 FRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 259
                   +  +        GEE   L+  F   D +++G L  +E RA  T++   +  
Sbjct: 3   HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60

Query: 260 FDVKQLMEAADMDGNGAIDYTEFTA 284
            D + + +  D D +GAI + EF  
Sbjct: 61  ADAEAVFQRLDADRDGAITFQEFAR 85

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 18/88 (20%), Positives = 24/88 (27%), Gaps = 27/88 (30%)

Query: 293 ERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           E    L   F   D + SG    +EFRA+                   +  +        
Sbjct: 24  EELARLRSVFAACDANRSGRLEREEFRALC-----------------TELRVRPADAEAV 66

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
              L       D D +G I F EF    
Sbjct: 67  FQRL-------DADRDGAITFQEFARGF 87

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 9/52 (17%), Positives = 14/52 (26%), Gaps = 1/52 (1%)

Query: 384 ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           E    L   F   D N    +   E      E  +   A  + +   +  D 
Sbjct: 24  EELARLRSVFAACDANRSGRLEREEFRALCTELRV-RPADAEAVFQRLDADR 74

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 247 RAGLTKVGSMLTEFDVKQLMEA---ADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQ 303
           R  L   G+     ++ +L       D + +G ++  EF A      ++  ++     FQ
Sbjct: 11  RENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRAL-CTELRVRPAD-AEAVFQ 68

Query: 304 YFDKDNSG---YDEFRAM 318
             D D  G   + EF   
Sbjct: 69  RLDADRDGAITFQEFARG 86

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 78.0 bits (192), Expect = 2e-17
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 176 SALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTV---KVIVEYLPGEETQALKEKFIE 232
             L    +GG+A      IL+ +Q RR++++ +  +   K   E    E+  A KEK++E
Sbjct: 3   GELSNRFQGGKAFG----ILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYME 58

Query: 233 MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL 292
            D +  G +    L+  + K+G   T  ++K+++       +  I Y +F    + +   
Sbjct: 59  FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK--- 115

Query: 293 ERSEYLSKAFQYFDKDNSGYDE 314
            RS  L K    F+   +    
Sbjct: 116 -RSAVL-KLVMMFEGKANESSP 135

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 42.9 bits (101), Expect = 4e-05
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 25/89 (28%)

Query: 293 ERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           E+     + +  FD +N G       + M+E                   G+  T     
Sbjct: 47  EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-----------------LGVPKTHL--- 86

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
              +KK++ +     +  I + +FVN+M 
Sbjct: 87  --EMKKMISEVTGGVSDTISYRDFVNMML 113

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 18/102 (17%)

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
           K FG+   +Q R +  + +       +   +  + +  NL   +         ++ +   
Sbjct: 13  KAFGILKARQERRLAEINR-------EFLCDQKYSDEENLPEKL------TAFKEKYMEF 59

Query: 397 DKNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRDH 435
           D N++  I +  L+   ++  +G   T   +K++ISEV    
Sbjct: 60  DLNNEGEIDLMSLKRMMEK--LGVPKTHLEMKKMISEVTGGV 99

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 77.6 bits (192), Expect = 2e-17
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 33/170 (19%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD--GNG 275
                    KE F+  D   +  ++  ++      +G   T  ++ +++     +     
Sbjct: 2   FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61

Query: 276 AIDYTEFTAATIQRQKLERS----EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNV 328
           AI + EF    +Q     +     E   +  + FDK+ +G     E R        +  +
Sbjct: 62  AITFEEFLPM-LQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELR------HVLATL 114

Query: 329 SHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
               T+          ++   +       ++G  D NG I++  FV  + 
Sbjct: 115 GEKMTE----------EEVEEL-------MKGQEDSNGCINYEAFVKHIM 147

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 32/136 (23%)

Query: 300 KAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
           +AF  FD+         +   +  +                  G   T        + K+
Sbjct: 12  EAFLLFDRTGDAKITASQVGDIARA-----------------LGQNPTNA-----EINKI 49

Query: 357 VLQGDID--GNGNIDFIEFVNLMTDIYKLETPELLE---KAFQYLDKNSDQFITVNELET 411
           +     +      I F EF+ ++      +     E   +  +  DK  +  +   EL  
Sbjct: 50  LGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRH 109

Query: 412 AFKENNMGDDATIKEI 427
                 +G+  T +E+
Sbjct: 110 VLA--TLGEKMTEEEV 123

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 80.8 bits (200), Expect = 4e-17
 Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 15/158 (9%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI---RREIQIRRLL 83
           Y  G +LG G     +L  +   +   A K +    +   A +       RRE Q    L
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVL----RADLARDPSFYLRFRREAQNAAAL 69

Query: 84  SGQPNIVELKSAHEDETAVHV----VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
           +  P IV +    E ET        VME   G  L D +  +G  + + A  V+     A
Sbjct: 70  N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +N  H  G++HRD+KP N   IS  +    KV DFG A
Sbjct: 129 LNFSHQNGIIHRDVKPANI-MISATNAV--KVMDFGIA 163

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 80.7 bits (200), Expect = 4e-17
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 16/160 (10%)

Query: 23  VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQ 78
           +M  Y     +G G +GV + C    T    A K      K   +E+D +I+    REI+
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK------KFLESEDDPVIKKIALREIR 54

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIV 137
           + + L   PN+V L      +  +H+V E C    +   +   +    E     +    +
Sbjct: 55  MLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTL 112

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            AVN CH    +HRD+KPEN   I++     +K+ DFG A
Sbjct: 113 QAVNFCHKHNCIHRDVKPENI-LITKHSV--IKLCDFGFA 149

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 75.5 bits (186), Expect = 4e-17
 Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 196 RMKQFRRMSKLKKLTV---KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           + +Q  R+ ++ K  +   K   +     + +  KEK++E D + NG +    L+  L K
Sbjct: 1   KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           +G   T  ++K+L+            Y +F
Sbjct: 61  LGVPKTHLELKKLIGEVSSGSGETFSYPDF 90

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 25/84 (29%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
             + +  FD + +G       + M+E                   G+  T        LK
Sbjct: 34  FKEKYMEFDLNGNGDIDIMSLKRMLEK-----------------LGVPKTHL-----ELK 71

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMT 378
           KL+ +          + +F+ +M 
Sbjct: 72  KLIGEVSSGSGETFSYPDFLRMML 95

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 78.0 bits (192), Expect = 5e-17
 Identities = 21/203 (10%), Positives = 51/203 (25%), Gaps = 52/203 (25%)

Query: 213 VIVEYLPGEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVGSMLT------------- 258
           +    L   +   +   F    D + +G + +D+    + K+ ++ +             
Sbjct: 1   MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60

Query: 259 --EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE---------YLSKAFQYFDK 307
             +     L + AD + +  +   E+     +  K              Y++  F   D 
Sbjct: 61  TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120

Query: 308 DNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDG 364
                    E+  +                    +G+  +           L       G
Sbjct: 121 SGDNIIDKHEYSTV-----------------YMSYGIPKSD---CDAAFDTL----SDGG 156

Query: 365 NGNIDFIEFVNLMTDIYKLETPE 387
              +    F  L T+ +      
Sbjct: 157 KTMVTREIFARLWTEYFVSNDRG 179

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 69.9 bits (171), Expect = 4e-14
 Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 27/161 (16%)

Query: 288 QRQKLERSEYLSKAFQY-FDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGN 343
           QR K+ R       F   +D ++ G    D+F   ++    I N+    TD  K      
Sbjct: 10  QRNKILR------VFNTFYDCNHDGVIEWDDFELAIKK---ICNLHSWPTDGKKHNEA-- 58

Query: 344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE---------LLEKAFQ 394
             +     +   L    D + +  +   E++ +  +  K               +   F 
Sbjct: 59  --RATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFD 116

Query: 395 YLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
             D + D  I  +E  T +    +   +        +    
Sbjct: 117 VNDTSGDNIIDKHEYSTVYMSYGI-PKSDCDAAFDTLSDGG 156

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 76.5 bits (189), Expect = 6e-17
 Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 32/167 (19%)

Query: 222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA-ADMDGNGAIDYT 280
            T+A K+ F   D    G ++ D L   L  +G   T   V+ ++ A + +    ++   
Sbjct: 2   ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61

Query: 281 EFTAATIQRQKLERS------EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHI 331
           + T      +K   +      E   KAFQ FDK+++G     + R M             
Sbjct: 62  QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYM------------- 108

Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                   G   T        + +L+   ++D NG ID+ +F+  + 
Sbjct: 109 ----LTGLGEKLTDA-----EVDELLKGVEVDSNGEIDYKKFIEDVL 146

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 56.1 bits (136), Expect = 9e-10
 Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 45/152 (29%)

Query: 300 KAFQYFDKDNSGY-------DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
             F  FDK   G        D  RA+  +P                     T Q     +
Sbjct: 8   DIFTLFDKKGQGAIAKDSLGDYLRAIGYNP---------------------TNQ-----L 41

Query: 353 LKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETP------ELLEKAFQYLDKNSDQFIT 405
           ++ ++     +    ++   +   L+    K          E   KAFQ  DK S   ++
Sbjct: 42  VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVS 101

Query: 406 VNELETAFKENNMGDDAT---IKEIISEVGRD 434
           V +L        +G+  T   + E++  V  D
Sbjct: 102 VGDLRYMLT--GLGEKLTDAEVDELLKGVEVD 131

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 80.7 bits (200), Expect = 6e-17
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   R++GRG +    L     T+  YA K + K+      + D  ++ E  +    S 
Sbjct: 10  DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW-VQTEKHVFEQASN 68

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H 
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            G+++RDLK +N   +  D    +K+TD+G
Sbjct: 129 RGIIYRDLKLDN---VLLDSEGHIKLTDYG 155

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 80.8 bits (200), Expect = 7e-17
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKK---PKMKYAENDMMIRREIQIRRLLS 84
           ++LG G +G  +L    + + T   YA K + K     K K  E+    R+   +   + 
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ---VLEHIR 116

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
             P +V L  A + ET +H++++   GG+LF  +  +  ++E +    +  IV A+   H
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +G+++RD+K EN   I  D N  + +TDFG
Sbjct: 177 KLGIIYRDIKLEN---ILLDSNGHVVLTDFG 204

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 74.8 bits (184), Expect = 7e-17
 Identities = 16/71 (22%), Positives = 30/71 (42%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
               A+ ++F   DT K  T+S +E RA   +   +LT+    +L     ++  G + Y 
Sbjct: 21  SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYP 80

Query: 281 EFTAATIQRQK 291
           +F +       
Sbjct: 81  DFLSRFSSETA 91

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 14/97 (14%), Positives = 34/97 (35%), Gaps = 25/97 (25%)

Query: 285 ATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGL 341
           A + +        +++ F+ FD   +     +EFRA+            I TD+      
Sbjct: 13  ARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAI------CNRRVQILTDEQ----- 61

Query: 342 GNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                        +L  +  ++  G + + +F++  +
Sbjct: 62  -----------FDRLWNEMPVNAKGRLKYPDFLSRFS 87

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 74.9 bits (185), Expect = 8e-17
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 28/129 (21%)

Query: 254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY- 312
             +L   D+K+ ++A      G+ ++ +F  A +  + +  ++ + K F+  D D SG+ 
Sbjct: 4   KDLLKADDIKKALDAVK--AEGSFNHKKF-FALVGLKAMSAND-VKKVFKAIDADASGFI 59

Query: 313 --DEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
             +E +  +       R+++   T                   LK      D DG+G I 
Sbjct: 60  EEEELKFVLKSFAADGRDLTDAETKA----------------FLK----AADKDGDGKIG 99

Query: 370 FIEFVNLMT 378
             EF  L+ 
Sbjct: 100 IDEFETLVH 108

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 66.1 bits (162), Expect = 1e-13
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
            +   G+ +  +F  L+    K  +   ++K F+ +D ++  FI   EL+   K      
Sbjct: 18  AVKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG 75

Query: 420 ---DDATIKEIISEVGRD 434
               DA  K  +    +D
Sbjct: 76  RDLTDAETKAFLKAADKD 93

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 58.7 bits (143), Expect = 5e-11
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 226 LKEKFIEMDTDKNGTLSYDELR---AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           +K+ F  +D D +G +  +EL+         G  LT+ + K  ++AAD DG+G I   EF
Sbjct: 44  VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103

Query: 283 TA 284
             
Sbjct: 104 ET 105

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 80.9 bits (200), Expect = 8e-17
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   R++GRG +    L     T+  YA + + K+      + D  ++ E  +    S 
Sbjct: 53  DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDW-VQTEKHVFEQASN 111

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +V L S  + E+ +  V+E   GGDL   +  +    E  A      I  A+N  H 
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            G+++RDLK +N   +  D    +K+TD+G
Sbjct: 172 RGIIYRDLKLDN---VLLDSEGHIKLTDYG 198

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 79.7 bits (197), Expect = 9e-17
 Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
           +G G  G  +      T    A K M    +    + +   I  ++ +       P IV+
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQM----RRSGNKEENKRILMDLDVVLKSHDCPYIVQ 88

Query: 92  LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMH 150
                   T V + MEL        +   +G   ER    +  AIV A+       GV+H
Sbjct: 89  CFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148

Query: 151 RDLKPENFCFISRDDNALLKVTDFG-SALLF 180
           RD+KP N   I  D+   +K+ DFG S  L 
Sbjct: 149 RDVKPSN---ILLDERGQIKLCDFGISGRLV 176

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 74.6 bits (184), Expect = 1e-16
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 28/129 (21%)

Query: 254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY- 312
             +L+  D++  + +       + +Y  F +      K    + + K F   D+D SG+ 
Sbjct: 4   TDILSAKDIESALSSCQ--AADSFNYKSFFSTVGLSSKTP--DQIKKVFGILDQDKSGFI 59

Query: 313 --DEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
             +E +  +     + R ++   T                   L      GD DG+G I 
Sbjct: 60  EEEELQLFLKNFSSSARVLTSAETKA----------------FLA----AGDTDGDGKIG 99

Query: 370 FIEFVNLMT 378
             EF +L+ 
Sbjct: 100 VEEFQSLVK 108

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 61.5 bits (150), Expect = 5e-12
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                 + ++  F + +      +TP+ ++K F  LD++   FI   EL+   K  +   
Sbjct: 18  SCQAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSA 75

Query: 420 ---DDATIKEIISEVGRDH 435
                A  K  ++    D 
Sbjct: 76  RVLTSAETKAFLAAGDTDG 94

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
           L  +    +K+ F  +D DK+G +  +EL+  L    S   +LT  + K  + A D DG+
Sbjct: 36  LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 95

Query: 275 GAIDYTEFTA 284
           G I   EF +
Sbjct: 96  GKIGVEEFQS 105

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 15/167 (8%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI---RR 75
              ++     + + +G+G FG+ +           A KS+         E        +R
Sbjct: 17  ADNEI----EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLR 134
           E+ I   L+  PNIV+L     +     +VME    GDL+ R++ K +         ++ 
Sbjct: 73  EVFIMSNLN-HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML 129

Query: 135 AIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNA--LLKVTDFGSA 177
            I   +    +    ++HRDL+  N    S D+NA    KV DFG +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 73.3 bits (181), Expect = 1e-16
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q +KE F   DT+K G++ Y EL+  +  +G  + + ++ +LM   D +GNG I + 
Sbjct: 4   EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63

Query: 281 EF 282
           +F
Sbjct: 64  DF 65

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 27/85 (31%)

Query: 298 LSKAFQYFDKDNSG---YDEFR-AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNML 353
           + +AF  FD + +G   Y E + AM                  +  G    K       +
Sbjct: 9   IKEAFDLFDTNKTGSIDYHELKVAM------------------RALGFDVKKP-----EI 45

Query: 354 KKLVLQGDIDGNGNIDFIEFVNLMT 378
            +L+ + D +GNG I F +F+++MT
Sbjct: 46  LELMNEYDREGNGYIGFDDFLDIMT 70

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 81.2 bits (200), Expect = 1e-16
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 8/152 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
            ++F  +LG+G FG   L     T+  YA K + K    +    E  M+ +R   +  L 
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALP 398

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +   
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            S G+++RDLK +N   +  D    +K+ DFG
Sbjct: 459 QSKGIIYRDLKLDN---VMLDSEGHIKIADFG 487

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
           +++G+G FG   L    +  + YA K + KK   K K  ++ M  R    +       P 
Sbjct: 44  KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN---VLLKNVKHPF 100

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +V L  + +    ++ V++   GG+LF  +  +  + E  A      I +A+   HS+ +
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RDLKPEN   I  D    + +TDFG
Sbjct: 161 VYRDLKPEN---ILLDSQGHIVLTDFG 184

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 78.7 bits (195), Expect = 2e-16
 Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 11/149 (7%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ- 86
           ++LG+G FG  +L    + +     YA K + K            + R+I    L+    
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI----LVEVNH 85

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P IV+L  A + E  ++++++  +GGDLF R+  +  ++E D    L  +  A++  HS+
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
           G+++RDLKPEN   I  D+   +K+TDFG
Sbjct: 146 GIIYRDLKPEN---ILLDEEGHIKLTDFG 171

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 16/165 (9%)

Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--- 74
             Y   M  Y    ++G G +G+   C    T    A K      K   +++D M++   
Sbjct: 18  NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK------KFLESDDDKMVKKIA 71

Query: 75  -REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPV 132
            REI++ + L    N+V L    + +   ++V E      + D + +       +     
Sbjct: 72  MREIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKY 129

Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           L  I+N +  CHS  ++HRD+KPEN   +S+     +K+ DFG A
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENI-LVSQSGV--VKLCDFGFA 171

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 8/152 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
           ++ F R+LG+G FG   L     T   YA K + K    +    E  M  +R   I  L 
Sbjct: 24  NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR---ILSLA 80

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P + +L    +    +  VME   GGDL   I     + E  A      I++A+   
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           H  G+++RDLK +N   +  D     K+ DFG
Sbjct: 141 HDKGIIYRDLKLDN---VLLDHEGHCKLADFG 169

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 32/162 (19%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+      +    +    G +S D       K+G   +  D K++ E         + Y 
Sbjct: 12  EKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----LYGDNLTYE 67

Query: 281 EFTAA-TIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKA 336
           ++    +I     +  E L K F +FD + +GY    + +        +       TD+ 
Sbjct: 68  QYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMK------NILTTWGDALTDQE 121

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                       A++ L             NID+  F   + 
Sbjct: 122 ------------AIDALN------AFSSEDNIDYKLFCEDIL 145

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 35/141 (24%)

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
              + +K + G    D                           LG       +       
Sbjct: 20  RIYFNEKSSGGKISIDNASYNARK-------------------LG-------LAPSSIDE 53

Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKEN 416
            +       N+ + +++  ++      +  E L K F + D N   ++T ++++      
Sbjct: 54  KKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILT-- 111

Query: 417 NMGDDAT---IKEIISEVGRD 434
             GD  T     + ++    +
Sbjct: 112 TWGDALTDQEAIDALNAFSSE 132

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 8/152 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
            ++F  +LG+G FG   L     T+  YA K + K    +    E  M+ +R   +  L 
Sbjct: 21  DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALP 77

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P + +L S  +    ++ VME   GGDL   I   G + E  A      I   +   
Sbjct: 78  GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            S G+++RDLK +N   +  D    +K+ DFG
Sbjct: 138 QSKGIIYRDLKLDN---VMLDSEGHIKIADFG 166

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 78.4 bits (194), Expect = 3e-16
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQ-PN 88
           ++LG+G FG   L  E +T   YA K + K+  +   E    +    +    L + + P 
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV----LQNTRHPF 66

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   HS  V
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RD+K EN   +  D +  +K+TDFG
Sbjct: 127 VYRDIKLEN---LMLDKDGHIKITDFG 150

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 12/152 (7%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
             +LG+G +G+ Y   + S  +  A K + ++           +  EI + + L    NI
Sbjct: 27  RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP----LHEEIALHKHLK-HKNI 81

Query: 90  VELKSAHEDETAVHVVMELCQGG---DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           V+   +  +   + + ME   GG    L          +E+      + I+  +   H  
Sbjct: 82  VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141

Query: 147 GVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
            ++HRD+K +N   +  +  + +LK++DFG++
Sbjct: 142 QIVHRDIKGDN---VLINTYSGVLKISDFGTS 170

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 8/152 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLL 83
            +   +MLG+G FG  +L     TN  +A K++ K         E  M+ +R   +  L 
Sbjct: 18  DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR---VLSLA 74

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P +  +    + +  +  VME   GGDL   I +   +    A      I+  +   
Sbjct: 75  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 134

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           HS G+++RDLK +N   I  D +  +K+ DFG
Sbjct: 135 HSKGIVYRDLKLDN---ILLDKDGHIKIADFG 163

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 77.7 bits (192), Expect = 6e-16
 Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 38/193 (19%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           S           +     M  +   RM G+G FG   L  E ST M  A K        K
Sbjct: 4   SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--------K 55

Query: 66  YAENDMMIRREIQIRRLLSGQ--PNIVELK-------SAHEDETAVHVVMELCQGGDLFD 116
             ++     RE+QI + L+    PNIV+L+            +  ++VVME      L  
Sbjct: 56  VIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH- 113

Query: 117 RIIAKGYYSERDAAP----------VLRAIVNAVNVCH--SMGVMHRDLKPENFCFISRD 164
           R   + YY  + A P          ++R+I       H  S+ V HRD+KP N   ++  
Sbjct: 114 RCC-RNYYRRQVAPPPILIKVFLFQLIRSI----GCLHLPSVNVCHRDIKPHNVL-VNE- 166

Query: 165 DNALLKVTDFGSA 177
            +  LK+ DFGSA
Sbjct: 167 ADGTLKLCDFGSA 179

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 77.2 bits (191), Expect = 8e-16
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 23/156 (14%)

Query: 31  RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI------RR 81
           R+LG+G +G  +     T  +T   +A K + K          M++R           R 
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK---------AMIVRNAKDTAHTKAERN 73

Query: 82  LLSG--QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
           +L     P IV+L  A +    +++++E   GG+LF ++  +G + E  A   L  I  A
Sbjct: 74  ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +   H  G+++RDLKPEN   I  +    +K+TDFG
Sbjct: 134 LGHLHQKGIIYRDLKPEN---IMLNHQGHVKLTDFG 166

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 75.9 bits (186), Expect = 1e-15
 Identities = 35/226 (15%), Positives = 74/226 (32%), Gaps = 25/226 (11%)

Query: 176 SALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDT 235
             +L       +    S +       +   L +L  +        +E Q+L   F   + 
Sbjct: 49  KWILSSAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGF--KNE 103

Query: 236 DKNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLER 294
              G +  D  +   ++             L  A D DGNGAI + +F        +   
Sbjct: 104 CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTV 163

Query: 295 SEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
            E L  AF  +D +  G    +E  A+++S            D   +      ++   + 
Sbjct: 164 HEKLKWAFNLYDINKDGCITKEEMLAIMKS----------IYDMMGRHTYPILREDAPLE 213

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLD 397
            +++   + D + +G +   EF+         +   ++  + Q  +
Sbjct: 214 HVERFFQKMDRNQDGVVTIDEFLETC-----QKDENIM-NSMQLFE 253

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 36/206 (17%), Positives = 58/206 (28%), Gaps = 50/206 (24%)

Query: 236 DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS 295
                   D   + L           + QL              T+FT   +Q       
Sbjct: 53  SSAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ-----------TKFTKKELQS------ 95

Query: 296 EYLSKAFQYFDKDNSGY-DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
             L + F+          D F+ +                 ++ F  G+   +       
Sbjct: 96  --LYRGFKNECPTGLVDEDTFKLIY----------------SQFFPQGDATTY-----AH 132

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK 414
            L    D DGNG I F +FV  ++ + +    E L+ AF   D N D  IT  E+    K
Sbjct: 133 FLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192

Query: 415 ---------ENNMGDDATIKEIISEV 431
                       +  +    E +   
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERF 218

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 77.2 bits (190), Expect = 1e-15
 Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 10/161 (6%)

Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
            K  E     +     LG G  GV +  +   + +  A K +  + K         I RE
Sbjct: 25  QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRE 81

Query: 77  IQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
           +Q+     S  P IV    A   +  + + ME   GG L   +   G   E+    V  A
Sbjct: 82  LQVLHECNS--PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 139

Query: 136 IVNAVNVCHSMG-VMHRDLKPENFCFISRDDNALLKVTDFG 175
           ++  +        +MHRD+KP N   I  +    +K+ DFG
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSN---ILVNSRGEIKLCDFG 177

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 12/158 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +  GR +G G FG  YL T   TN   A K    K K         +  E +I R+L G
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQG 61

Query: 86  QPNIVELKSAHEDETAVHVVMELCQG---GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
              I  ++    +     +VM+L  G    DLF+    K   S +    +   ++N V  
Sbjct: 62  GTGIPNVRWFGVEGDYNVLVMDL-LGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEF 118

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            HS   +HRD+KP+NF          + + DFG A  +
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 31/165 (18%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
               + Q  KE F  +D DK+G +S +++RA    +G + TE ++  ++     +  G I
Sbjct: 51  FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106

Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYT 333
           ++T F      R       + +  AF  FD+ + G    +  +  +            ++
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGD-GKCKEETLKRSL------TTWGEKFS 159

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                              + + + +  IDGNG ID  +F  ++T
Sbjct: 160 QDE----------------VDQALSEAPIDGNGLIDIKKFAQILT 188

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 51.2 bits (123), Expect = 9e-08
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 44/156 (28%)

Query: 288 QRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
           Q Q  E      +AFQ  D+D  G    ++ RA                           
Sbjct: 53  QHQVQE----FKEAFQLIDQDKDGFISKNDIRAT-------------------------- 82

Query: 345 KQFRAM--NMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETP-ELLEKAFQYLDKNSD 401
             F ++     ++ +     +  G I+F  F+ +  D        +++  AF   D+  D
Sbjct: 83  --FDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEG-D 139

Query: 402 QFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
                  L+ +      G+  +   + + +SE   D
Sbjct: 140 GKCKEETLKRSLT--TWGEKFSQDEVDQALSEAPID 173

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 17/169 (10%)

Query: 12  RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM 71
            Y      +      Y   R LGRG++   +     + N     K +    K K      
Sbjct: 24  DYESHVVEWG-NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK------ 76

Query: 72  MIRREIQIRRLLSGQPNIVELK---SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERD 128
            I+REI+I   L G PNI+ L          T   V   +    D   ++      ++ D
Sbjct: 77  -IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV-NNTDF-KQLYQT--LTDYD 131

Query: 129 AAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
               +  I+ A++ CHSMG+MHRD+KP N       ++  L++ D+G A
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLA 178

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 78.0 bits (192), Expect = 1e-15
 Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 24/179 (13%)

Query: 10  RQRYPILGKPYEDVMLH--YSFGRMLGRGRFGVTYLCT-ENSTNMPYACKSMAKKPKMKY 66
              Y  L +     ++   Y     +  G  G  YL    N    P   K +       +
Sbjct: 63  GSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL------VH 116

Query: 67  AENDMMIRREIQIRRLLSG--QPNIV------ELKSAHEDETAVHVVMELCQGGDLFDRI 118
           + +       +  R+ L+    P+IV      E    H D    ++VME   G  L    
Sbjct: 117 SGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG-YIVMEYVGGQSLKRSK 175

Query: 119 IAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
                    +A   L  I+ A++  HS+G+++ DLKPEN   ++ +    LK+ D G+ 
Sbjct: 176 --GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN-IMLTEEQ---LKLIDLGAV 228

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 8/147 (5%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-MMIRREIQIRRLLSGQPNI 89
           ++LG+G FG   L  E +T   YA K + K+  +   E    +    +      S  P +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNSRHPFL 210

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGV 148
             LK + +    +  VME   GG+LF  +  +  +SE  A      IV+A++  HS   V
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 270

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           ++RDLK EN   +  D +  +K+TDFG
Sbjct: 271 VYRDLKLEN---LMLDKDGHIKITDFG 294

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 69.8 bits (172), Expect = 2e-15
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
            K  F + D +K+G LS DE R          T+ D+ +  E  D+DGNG ++  EFT+
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 25/84 (29%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
             + F+ FDK+  G    DEFR +                 A  F    T++      + 
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREV-----------------ALAFSPYFTQE-----DIV 40

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMT 378
           K   + D+DGNG ++  EF + + 
Sbjct: 41  KFFEEIDVDGNGELNADEFTSCIE 64

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 23/165 (13%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
            Y+++        ++GRG FGV            +  K +A K +++          E++
Sbjct: 6   DYKEI----EVEEVVGRGAFGVVCKAK-------WRAKDVAIK-QIESESERKAFIVELR 53

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--- 135
               ++  PNIV+L  A  +   V +VME  +GG L++ +          AA  +     
Sbjct: 54  QLSRVN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110

Query: 136 IVNAVNVCHSM---GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
               V   HSM    ++HRDLKP N   +      +LK+ DFG+A
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPN-LLLV-AGGTVLKICDFGTA 153

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           +GRG +G         +    A K +      K  +    +  ++ +    S  P IV+ 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ---LLMDLDVVMRSSDCPYIVQF 86

Query: 93  KSAHEDETAVHVVMELCQGG--DLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMG- 147
             A   E    + MEL        +  + +       E     +  A V A+N       
Sbjct: 87  YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG-SALL 179
           ++HRD+KP N   I  D +  +K+ DFG S  L
Sbjct: 147 IIHRDIKPSN---ILLDRSGNIKLCDFGISGQL 176

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 74.7 bits (184), Expect = 4e-15
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 11/155 (7%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
           F   +GRG F   Y   +  T +  A   +  +   K        + E ++ + L   PN
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR--FKEEAEMLKGLQ-HPN 86

Query: 89  IVEL----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
           IV      +S  + +  + +V EL   G L   +        +      R I+  +   H
Sbjct: 87  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 146

Query: 145 SMG--VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +    ++HRDLK +N  FI+      +K+ D G A
Sbjct: 147 TRTPPIIHRDLKCDN-IFITG-PTGSVKIGDLGLA 179

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
              ++G G FG  Y           A K+    P    ++    +R+E ++  +L   PN
Sbjct: 11  LEEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPN 67

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG- 147
           I+ L+     E  + +VME  +GG L   +++               I   +N  H    
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126

Query: 148 --VMHRDLKPEN-----FCFISRDDNALLKVTDFGSA 177
             ++HRDLK  N             N +LK+TDFG A
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 71.0 bits (175), Expect = 5e-15
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 40/174 (22%)

Query: 218 LPGEETQALKEKFIEMD--TDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           L  +E   LK+ F   D    ++G +   +L      +G      DV  +       G  
Sbjct: 3   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61

Query: 276 AIDYTEFTAATIQRQKLERSEY--LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSH 330
           ++ + EF  A       E+  +    +AF+ FD++  G+    E R +            
Sbjct: 62  SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHV------------ 109

Query: 331 IYTDKAKKFGLGNTKQFRAMNM----LKKLVLQGDI--DGNGNIDFIEFVNLMT 378
                    G           +    + +++   D+  D  GN+ + +FV  + 
Sbjct: 110 -----LTALG---------ERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLE--TPELLEKAFQYLDKNSDQFITVNELETAFK 414
           V      G  ++ F EF+     +   E  T     +AF+  D+    FI+  EL     
Sbjct: 52  VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT 111

Query: 415 ENNMGDDAT---IKEIISEV 431
              +G+  +   + EII   
Sbjct: 112 A--LGERLSDEDVDEIIKLT 129

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 10/147 (6%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
           LGRG +GV        +    A K +      +  +    +  ++ I       P  V  
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR---LLMDLDISMRTVDCPFTVTF 71

Query: 93  KSAHEDETAVHVVMELCQGG--DLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHS-MGV 148
             A   E  V + MEL        + ++I K     E     +  +IV A+   HS + V
Sbjct: 72  YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
           +HRD+KP N   +  +    +K+ DFG
Sbjct: 132 IHRDVKPSN---VLINALGQVKMCDFG 155

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 68.4 bits (168), Expect = 8e-15
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
           +      ++    +  F   DT+ +G +S  EL   L  +G  +T  +V+++M   D DG
Sbjct: 1   MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59

Query: 274 NGAIDYTEFTAATIQRQKLERSEYLSKAF 302
           +G I + EF      R      + +SK F
Sbjct: 60  DGFISFDEF--TDFARANRGLVKDVSKIF 86

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 28/99 (28%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
             + F+ FD +  G     E    +++                   LG+        M+ 
Sbjct: 13  RERIFKRFDTNGDGKISSSELGDALKT-------------------LGSVTPDEVRRMMA 53

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAF 393
           ++    D DG+G I F EF +           + + K F
Sbjct: 54  EI----DTDGDGFISFDEFTDFAR--ANRGLVKDVSKIF 86

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 389 LEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
            E+ F+  D N D  I+ +EL  A K         ++ +++E+  D 
Sbjct: 13  RERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDG 59

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 69.9 bits (171), Expect = 1e-14
 Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 181 EEEGGEASDDTSVILRMKQFRRMSKLKKLTV---KVIVEYLPGEETQALKEKFIEMDTDK 237
           + +GG+A      +L+ +Q  R+  + K  +   K   +     + +A K K++E D + 
Sbjct: 6   DLQGGKAFG----LLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNG 61

Query: 238 NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEY 297
           NG +    L+  L K+G   T  ++K+L+            Y++F    +   K      
Sbjct: 62  NGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLR--MMLGKRSAILR 119

Query: 298 LSKAFQYFDKD 308
           +   ++  +K+
Sbjct: 120 MILMYEEKNKE 130

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 32/143 (22%)

Query: 263 KQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMV 319
            Q  E  +      +D  +++       KLE        +  FD + +G       + M+
Sbjct: 18  AQQEERLEGINKQFLDDPKYSNDEDLPSKLEA---FKVKYMEFDLNGNGDIDIMSLKRML 74

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
                            +K G+  T        LK+L+ +          + +F+ +M  
Sbjct: 75  -----------------EKLGVPKTHL-----ELKRLIREVSSGSEETFSYSDFLRMMLG 112

Query: 380 IYKLETPELLEKAFQYLDKNSDQ 402
               +   +L     Y +KN + 
Sbjct: 113 ----KRSAILRMILMYEEKNKEH 131

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 18/103 (17%)

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQY 395
            K FGL   +Q   +  + K              F++      D       E  +  +  
Sbjct: 10  GKAFGLLKAQQEERLEGINK-------------QFLDDPKYSNDEDLPSKLEAFKVKYME 56

Query: 396 LDKNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRDH 435
            D N +  I +  L+   ++  +G   T   +K +I EV    
Sbjct: 57  FDLNGNGDIDIMSLKRMLEK--LGVPKTHLELKRLIREVSSGS 97

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 58/202 (28%)

Query: 20  YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI 79
            E     YS G+ LG G FG+     +  +   +A K + + P+ K         RE+ I
Sbjct: 2   LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN--------RELDI 53

Query: 80  RRLLSGQPNIVELK--------------------------------------SAHEDETA 101
            ++L    NI++L                                               
Sbjct: 54  MKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY 112

Query: 102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA------IVNAVNVCHSMGVMHRDLKP 155
           ++V+ME      L  +++ K +     + P+         +  AV   HS+G+ HRD+KP
Sbjct: 113 LNVIMEY-VPDTLH-KVL-KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169

Query: 156 ENFCFISRDDNALLKVTDFGSA 177
           +N    S+D+   LK+ DFGSA
Sbjct: 170 QNLLVNSKDNT--LKLCDFGSA 189

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 8/156 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  GR +G G FG  YL T+ +     A K    K K         +  E +I +++ G
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQG 63

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFD-RIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              I  ++    +     +VMEL  G  L D        +S +    +   +++ +   H
Sbjct: 64  GVGIPTIRWCGAEGDYNVMVMEL-LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           S   +HRD+KP+NF         L+ + DFG A  +
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y      G       +   + + +   A   +  +  +        + R +++ R+   +
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI--DK 90

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P +  +           VV E  +GG L +  +A    S   A   ++++  A +  H  
Sbjct: 91  PGVARVLDVVHTRAGGLVVAEWIRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRA 148

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
           GV      P     +S D +    +    +      +     D
Sbjct: 149 GVALSIDHPSRV-RVSIDGDV--VLAYPATM----PDANPQDD 184

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 10/173 (5%)

Query: 12  RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM 71
              +   P    +  Y     LG G +G  Y   +  TN   A K    + ++++ E  +
Sbjct: 21  SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK----RIRLEHEEEGV 76

Query: 72  MIR--REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
                RE+ + + L    NI+ELKS       +H++ E  +  DL   +      S R  
Sbjct: 77  PGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVI 134

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPEN--FCFISRDDNALLKVTDFGSALLF 180
              L  ++N VN CHS   +HRDLKP+N         +  +LK+ DFG A  F
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P+ D+    +    +G G FG  +    + +    A K +    +  +AE      RE+ 
Sbjct: 35  PWCDL----NIKEKIGAGSFGTVHRAEWHGS--DVAVKIL--MEQDFHAERVNEFLREVA 86

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
           I + L   PNIV    A      + +V E    G L+  +   G   + D    L     
Sbjct: 87  IMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM--- 142

Query: 139 AVNVC------HSMG--VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           A +V       H+    ++HR+LK  N   +  D    +KV DFG +
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPN-LLV--DKKYTVKVCDFGLS 186

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 21/161 (13%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA-KKPKMKYAENDMM--IRR 75
           P+E +      G ++G+GRFG  Y    +          +A +   ++    D +   +R
Sbjct: 31  PFEQL----EIGELIGKGRFGQVYHGRWHGE--------VAIRLIDIERDNEDQLKAFKR 78

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLR 134
           E+   R      N+V    A      + ++  LC+G  L+  +  AK          + +
Sbjct: 79  EVMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            IV  +   H+ G++H+DLK +N  F    DN  + +TDFG
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKN-VFY---DNGKVVITDFG 174

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 70.0 bits (171), Expect = 4e-14
 Identities = 31/207 (14%), Positives = 73/207 (35%), Gaps = 22/207 (10%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 261
             L K  ++ +        EE  +  + F  +     G ++  + ++   K         
Sbjct: 14  GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71

Query: 262 -VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
             + +  + D + +G +D+ E+  A       + ++ L  AF  +D D +G    +E   
Sbjct: 72  YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +V +   +     +      +    NT + RA  + K        + +  +   EF+   
Sbjct: 132 IVMAIFKMITPEDVKLLPDDE----NTPEKRAEKIWKYF----GKNDDDKLTEKEFIEGT 183

Query: 378 TDIYKLETPELLEKAFQYLDKNSDQFI 404
                L   E+L +  Q+  +   + +
Sbjct: 184 -----LANKEIL-RLIQFEPQKVKEKM 204

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 69.6 bits (170), Expect = 7e-14
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 22/213 (10%)

Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG 249
              +   ++      + + L            E Q L   F   +   +G ++ +  +  
Sbjct: 20  KDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF--KNECPSGVVNEETFKQI 77

Query: 250 LTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKD 308
             +             L  A D    G++ + +F  A     +    E L   F  +D +
Sbjct: 78  YAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDIN 137

Query: 309 NSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGN 365
             GY   +E   +V++            D   K+     K+      +     + D + +
Sbjct: 138 KDGYINKEEMMDIVKA----------IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 187

Query: 366 GNIDFIEFVNLMTDIYKLETPELLEKAFQYLDK 398
           G +   EF+         E   ++ ++ Q    
Sbjct: 188 GIVTLDEFLESC-----QEDDNIM-RSLQLFQN 214

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 9/80 (11%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK------ 414
           D    G++ F +FV  ++ + +    E L   F   D N D +I   E+    K      
Sbjct: 99  DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMM 158

Query: 415 ---ENNMGDDATIKEIISEV 431
                 +  + T ++ +   
Sbjct: 159 GKYTYPVLKEDTPRQHVDVF 178

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 26/177 (14%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
            ++ +    +F   L     G  +       ++    K +  +        D     E  
Sbjct: 8   DFKQL----NFLTKLNENHSGELWKGRWQGNDI--VVKVLKVRDWSTRKSRD--FNEECP 59

Query: 79  IRRLLSGQPNIVELKSAHEDETAVH--VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
             R+ S  PN++ +  A +   A H  ++      G L++ ++ +G     D +  ++  
Sbjct: 60  RLRIFS-HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKF- 116

Query: 137 VNAVNVC------HSMG--VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
             A+++       H++   +    L   +   I  D++   +++       F+  G 
Sbjct: 117 --ALDMARGMAFLHTLEPLIPRHALNSRS-VMI--DEDMTARISMADVKFSFQSPGR 168

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 43/169 (25%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            +    K+ F   D    G +    +   L   G   T  ++ ++    +      +D  
Sbjct: 2   TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57

Query: 281 EFTAATIQRQKLERS----EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYT 333
           +F    + R          E   K FQ FDKD +G     E R ++ S            
Sbjct: 58  QFLQV-LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTS------------ 104

Query: 334 DKAKKFGLGNTKQFRAMNM----LKKLVLQGDIDGNGNIDFIEFVNLMT 378
                  LG         +    + +L+    +  +G +++ +FV ++ 
Sbjct: 105 -------LG-------EKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 57.1 bits (139), Expect = 3e-10
 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 37/144 (25%)

Query: 300 KAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL 356
           +AF  FD+  +G         ++ +                    G        N     
Sbjct: 9   QAFSLFDRHGTGRIPKTSIGDLLRA-------------------CG-------QNPTLAE 42

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLE---KAFQYLDKNSDQFITVNELETAF 413
           + + +      +D  +F+ ++      + P   E   K FQ  DK++   I V EL    
Sbjct: 43  ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVL 102

Query: 414 KENNMGDDAT---IKEIISEVGRD 434
              ++G+  +   + E++  V   
Sbjct: 103 T--SLGEKLSNEEMDELLKGVPVK 124

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRA 317
           E   K ++            Y +      ++  +E     L K F               
Sbjct: 2   EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHL----- 56

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
              + +++R         +   G+    +  A  M++    +GD+DG+G ++  EF  LM
Sbjct: 57  --ITAESLRRN-------SGILGIEGMSKEDAQGMVR----EGDLDGDGALNQTEFCVLM 103

Query: 378 TDIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
             +    +PE++E A  +L+K   Q +  + L +
Sbjct: 104 VRL----SPEMMEDAETWLEKALTQELCNHNLSS 133

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 3/85 (3%)

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSDQFITVNELET 411
            K ++L+          + + + +M +   +E     L K F  L       IT   L  
Sbjct: 5   EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRR 64

Query: 412 AFKENNMGD--DATIKEIISEVGRD 434
                 +        + ++ E   D
Sbjct: 65  NSGILGIEGMSKEDAQGMVREGDLD 89

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           L + F  +   +   ++ + LR     +G   +++ D + ++   D+DG+GA++ TEF  
Sbjct: 42  LCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCV 101

Query: 285 ---ATIQRQKLERSEYLSKAFQYFDKDNS 310
                      +   +L KA      +++
Sbjct: 102 LMVRLSPEMMEDAETWLEKALTQELCNHN 130

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 67.6 bits (165), Expect = 2e-13
 Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 18/198 (9%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-F 260
           SKL K  +  + +  Y    E Q   + F  +    +G L+ ++      +     +   
Sbjct: 6   SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63

Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVE 320
               L    D D NG I + EF        +    E LS AF+ +D ++ GY  F  M+ 
Sbjct: 64  FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123

Query: 321 SPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
              ++  +        +      T + R   + K +    D + +G I   EF       
Sbjct: 124 IVASVYKMMGSMVTLNED---EATPEMRVKKIFKLM----DKNEDGYITLDEFREGSK-- 174

Query: 381 YKLETPELLEKAFQYLDK 398
                P ++  A    D 
Sbjct: 175 ---VDPSII-GALNLYDG 188

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 67.3 bits (164), Expect = 3e-13
 Identities = 20/189 (10%), Positives = 50/189 (26%), Gaps = 52/189 (27%)

Query: 226 LKEKFIEM-DTDKNGTLSYDELRAGLTKVGSM---------------LTEFDVKQLMEAA 269
           +K  F    D + +G++  ++    +T+   +                 E + + L   A
Sbjct: 10  IKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRA 69

Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSE---------YLSKAFQYFDKDNSGY---DEFRA 317
           D++ +  + + E+ A   +     +S           +   F+  D    G    +EF+ 
Sbjct: 70  DINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQN 129

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
             ++                              +   +       G    D   +  L 
Sbjct: 130 YCKN-------------------FQLQCA-DVPAVYNVI----TDGGKVTFDLNRYKELY 165

Query: 378 TDIYKLETP 386
             +      
Sbjct: 166 YRLLTSPAA 174

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 22/161 (13%), Positives = 56/161 (34%), Gaps = 27/161 (16%)

Query: 288 QRQKLERSEYLSKAFQYF-DKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGN 343
           Q+QK++        F +F D ++ G    ++F  M+      + V+      A    +  
Sbjct: 6   QKQKIKF------TFDFFLDMNHDGSIQDNDFEDMMTR---YKEVNKGSLSDADYKSM-- 54

Query: 344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE---------LLEKAFQ 394
             Q    +  + L  + DI+ +  + + E++ +                     +   F+
Sbjct: 55  --QASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFK 112

Query: 395 YLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
            +D + D  + + E +   K   +   A +  + + +    
Sbjct: 113 GMDVSGDGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGG 152

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 57.2 bits (138), Expect = 6e-10
 Identities = 23/188 (12%), Positives = 49/188 (26%), Gaps = 37/188 (19%)

Query: 257 LTEFDVKQLMEA----ADMDGNGAIDYTEFTAA---------------TIQRQKLERSEY 297
           L +F  +++        DM+ +G+I   +F                    +  +    + 
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 298 LSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
                   D +      ++E+ AM E                              N + 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWE-------------KTIATCKSVADLPAWCQNRIP 108

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK 414
            L    D+ G+G +D  EF N   +         +   +  +         +N  +  + 
Sbjct: 109 FLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKELYY 166

Query: 415 ENNMGDDA 422
                  A
Sbjct: 167 RLLTSPAA 174

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 3/107 (2%)

Query: 179 LFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN 238
            + +  G A  +   ++  +++  M +    T K + + LP      +   F  MD   +
Sbjct: 61  EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVAD-LPAWCQNRIPFLFKGMDVSGD 119

Query: 239 GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           G +  +E +         L   DV  +       G    D   +   
Sbjct: 120 GIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKEL 164

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 21/67 (31%), Positives = 32/67 (47%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
            +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71

Query: 276 AIDYTEF 282
            ID+ EF
Sbjct: 72  TIDFEEF 78

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 33/105 (31%)

Query: 285 ATIQRQKLERSEYLSK--------AFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYT 333
           A++  Q+ E   +LS+        AF  FD D  G     E   ++              
Sbjct: 1   ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM------------ 48

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                 G   TK+      L  ++ + D DG+G IDF EF+ +M 
Sbjct: 49  -----LGQNPTKE-----ELDAIIEEVDEDGSGTIDFEEFLVMMV 83

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  GR +G G FGV +  T    N   A K   ++           +R E +  +LL+G
Sbjct: 11  HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------PQLRDEYRTYKLLAG 64

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFD-RIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              I  +    ++     +V++L  G  L D   +    +S +  A   + ++  V   H
Sbjct: 65  CTGIPNVYYFGQEGLHNVLVIDL-LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123

Query: 145 SMGVMHRDLKPENFCF--ISRDDNALLKVTDFGSA 177
              +++RD+KP+NF     +  +  ++ V DFG  
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 27/167 (16%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN-DMMIRREIQIRRL 82
           M  Y     LG G +   Y      T+   A     K+ ++++ E       RE+ + + 
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVA----LKEIRLEHEEGAPCTAIREVSLLKD 56

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELC---------QGGDLFDRIIAKGYYSERDAAPVL 133
           L    NIV L      E ++ +V E             G++ +    K +         L
Sbjct: 57  LK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLF---------L 106

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             ++  +  CH   V+HRDLKP+N   +  ++   LK+ DFG A   
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQN---LLINERGELKLADFGLARAK 150

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 16/178 (8%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDY 279
            E Q L   F   +   +G ++ +  +    +             L  A D    G++ +
Sbjct: 18  RELQVLYRGF--KNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 75

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
            +F  A     +    E L   F  +D +  GY     M++  + I ++   YT    K 
Sbjct: 76  EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 135

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLD 397
              +T +       +K+    D + +G +   EF+         E   ++ ++ Q   
Sbjct: 136 ---DTPRQHVDVFFQKM----DKNKDGIVTLDEFLES-----XQEDDNIM-RSLQLFQ 180

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 10/104 (9%)

Query: 338 KFGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
           K            +     +    D    G++ F +FV  ++ + +    E L   F   
Sbjct: 42  KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 101

Query: 397 DKNSDQFITVNELETAFK---------ENNMGDDATIKEIISEV 431
           D N D +I   E+    K            +  + T ++ +   
Sbjct: 102 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVF 145

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 38/170 (22%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-----REIQIRRLLSGQ- 86
           +G G +G  Y   +  +    A K      ++               RE+ + R L    
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALK----SVRVPNGGGGGGGLPISTVREVALLRRLEAFE 72

Query: 87  -PNIVELK-----SAHEDETAVHVVMELC----------QGGDLFDRIIAKGYYSERDAA 130
            PN+V L      S  + E  V +V E                       K         
Sbjct: 73  HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL------- 125

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             +R  +  ++  H+  ++HRDLKPEN   I       +K+ DFG A ++
Sbjct: 126 --MRQFLRGLDFLHANCIVHRDLKPEN---ILVTSGGTVKLADFGLARIY 170

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 25/158 (15%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSGQPNIV 90
           +G G +GV Y      T    A K    K ++      +     REI + + L+  PNIV
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALK----KIRLDTETEGVPSTAIREISLLKELN-HPNIV 65

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV--------NAVNV 142
           +L      E  +++V E     DL      K +        +   ++          +  
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQ-DL------KKFMDASALTGIPLPLIKSYLFQLLQGLAF 118

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           CHS  V+HRDLKP+N   +  +    +K+ DFG A  F
Sbjct: 119 CHSHRVLHRDLKPQN---LLINTEGAIKLADFGLARAF 153

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           S       P     ++ +   Y    ++G G +G      +       A K      K+ 
Sbjct: 35  SSKPTASMPRPHSDWQ-IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK------KIL 87

Query: 66  YAENDMM----IRREIQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFD 116
               D++    I REI I   L+   ++V++         E    ++VV+E+    D   
Sbjct: 88  RVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKK 145

Query: 117 RIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS 176
                 Y +E     +L  ++  V   HS G++HRDLKP N      + +  +KV DFG 
Sbjct: 146 LFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN---CLVNQDCSVKVCDFGL 202

Query: 177 ALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEY 217
           A   +      S                   K   + +  +
Sbjct: 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGH 243

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           ++  F   DT+ +G +S  EL   L  +GS   + +V+++M   D DG+G ID+ EF + 
Sbjct: 5   MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS- 62

Query: 286 TIQRQKLERSEYLSKAF 302
                     + ++K F
Sbjct: 63  -FCNANPGLMKDVAKVF 78

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 28/102 (27%)

Query: 295 SEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
           ++ + + F+ FD +  G     E    +                 +  G  +  + + M 
Sbjct: 2   ADDMERIFKRFDTNGDGKISLSELTDAL-----------------RTLGSTSADEVQRM- 43

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAF 393
                + + D DG+G IDF EF++           + + K F
Sbjct: 44  -----MAEIDTDGDGFIDFNEFISFCNA--NPGLMKDVAKVF 78

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 389 LEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
           +E+ F+  D N D  I+++EL  A +         ++ +++E+  D 
Sbjct: 5   MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDG 51

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 66.0 bits (162), Expect = 3e-12
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSGQPNIV 90
           +G G +G  +      T+   A K    + ++   +  +     REI + + L    NIV
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALK----RVRLDDDDEGVPSSALREICLLKELK-HKNIV 64

Query: 91  ELKSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
            L      +  + +V E C   DL   FD     G          L  ++  +  CHS  
Sbjct: 65  RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
           V+HRDLKP+N   I  + N  LK+ +FG A  F
Sbjct: 122 VLHRDLKPQNL-LI--NRNGELKLANFGLARAF 151

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 66.0 bits (162), Expect = 3e-12
 Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 25/185 (13%)

Query: 5   VSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM 64
           +              ++ +M  Y     +G G +GV Y    +S     A     K+ ++
Sbjct: 1   MHHHHHHSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAK-DSQGRIVA----LKRIRL 55

Query: 65  KYAENDMMIR--REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG 122
              +  +     REI + + L   PNIV L      E  + +V E  +  DL      K 
Sbjct: 56  DAEDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEK-DL------KK 107

Query: 123 Y-------YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                     +      L  ++  V  CH   ++HRDLKP+N   I  + +  LK+ DFG
Sbjct: 108 VLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN-LLI--NSDGALKLADFG 164

Query: 176 SALLF 180
            A  F
Sbjct: 165 LARAF 169

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 66.4 bits (163), Expect = 3e-12
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMIRREIQIRRLLSGQP 87
           LG G+F   Y   + +TN   A K    K K+ +             REI++ + LS  P
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIK----KIKLGHRSEAKDGINRTALREIKLLQELS-HP 72

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHS 145
           NI+ L  A   ++ + +V +  +  DL + II       +       +   +  +   H 
Sbjct: 73  NIIGLLDAFGHKSNISLVFDFMET-DL-EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             ++HRDLKP N   +  D+N +LK+ DFG A  F
Sbjct: 131 HWILHRDLKPNNL-LL--DENGVLKLADFGLAKSF 162

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 61.1 bits (149), Expect = 3e-12
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
           ++  +  + LKE F   D D+NG +S  ELR  +  +G  LT+ +V+Q+++ AD+DG+G 
Sbjct: 2   HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61

Query: 277 IDYTEFTA---ATIQRQKLERSEYLSKAF 302
           ++Y EF                  L + F
Sbjct: 62  VNYEEFVKMMMTVRGGGGGNGWSRLRRKF 90

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 22/104 (21%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           +  E L +AF+ FDKD +GY        S   +R+V           G   T +      
Sbjct: 6   DAEEELKEAFKVFDKDQNGYI-------SASELRHV-------MINLGEKLTDEE----- 46

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL---ETPELLEKAF 393
           +++++ + D+DG+G +++ EFV +M  +           L + F
Sbjct: 47  VEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRRKF 90

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 384 ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
           +  E L++AF+  DK+ + +I+ +EL        +G+  T   ++++I E   D
Sbjct: 6   DAEEELKEAFKVFDKDQNGYISASELRHVMIN--LGEKLTDEEVEQMIKEADLD 57

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 12/156 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           ++  G+ +G G FG   L     TN   A K    K +         +  E +  + L  
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA------PQLHLEYRFYKQLGS 63

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFD-RIIAKGYYSERDAAPVLRAIVNAVNVCH 144
              I ++           +V+EL  G  L D   +    +S +    +   +++ +   H
Sbjct: 64  GDGIPQVYYFGPCGKYNAMVLEL-LGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH 122

Query: 145 SMGVMHRDLKPENFCFISRDDNALLK---VTDFGSA 177
           S  +++RD+KPENF  I R  N   +   + DF  A
Sbjct: 123 SKNLIYRDVKPENFL-IGRPGNKTQQVIHIIDFALA 157

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 65.3 bits (160), Expect = 7e-12
 Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 16/155 (10%)

Query: 33  LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN-DMMIRREIQIRRLLSGQPNIVE 91
           LG G +   Y     +T +  A     K+ K+   E       REI + + L    NIV 
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVA----LKEVKLDSEEGTPSTAIREISLMKELK-HENIVR 67

Query: 92  LKSAHEDETAVHVVMELCQGGDL------FDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
           L      E  + +V E     DL                           ++  +  CH 
Sbjct: 68  LYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
             ++HRDLKP+N   +  +    LK+ DFG A  F
Sbjct: 127 NKILHRDLKPQN---LLINKRGQLKLGDFGLARAF 158

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 65.3 bits (160), Expect = 8e-12
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 38/190 (20%)

Query: 11  QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND 70
           ++Y  +  P+ D +  Y     +G+G FG  +      T    A K    K  M   EN+
Sbjct: 3   KQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK----KVLM---ENE 55

Query: 71  -----MMIRREIQIRRLLSGQPNIVELK--------SAHEDETAVHVVMELCQGGDLFDR 117
                +   REI+I +LL    N+V L           +  + ++++V + C+  DL   
Sbjct: 56  KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DL--- 110

Query: 118 IIAKGY-------YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK 170
               G        ++  +   V++ ++N +   H   ++HRD+K  N   +    + +LK
Sbjct: 111 ---AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN---VLITRDGVLK 164

Query: 171 VTDFGSALLF 180
           + DFG A  F
Sbjct: 165 LADFGLARAF 174

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.4 bits (160), Expect = 9e-12
 Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 20/174 (11%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
             G  +GRG FG  +     + N   A K   ++      +   +  +E +I +  S  P
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVK-SCRETLPPDLKAKFL--QEARILKQYS-HP 172

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC--- 143
           NIV L      +  +++VMEL QGGD         +     A   ++ ++    +     
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLT------FLRTEGARLRVKTLLQMVGDAAAGM 226

Query: 144 ---HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
               S   +HRDL   N C ++  +    K++DFG +    +    AS     +
Sbjct: 227 EYLESKCCIHRDLAARN-CLVTEKNVL--KISDFGMSREEADGVYAASGGLRQV 277

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 65.4 bits (160), Expect = 9e-12
 Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 21/194 (10%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           + +      + G+ ++ V   Y+    +G G +G+     +N   +  A K      K+ 
Sbjct: 9   AAAAAGPEMVRGQVFD-VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK------KIS 61

Query: 66  YAENDMM---IRREIQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFDR 117
             E+        REI+I        NI+ +         E    V++V +L    DL  +
Sbjct: 62  PFEHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDL-YK 118

Query: 118 IIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++   + S       L  I+  +   HS  V+HRDLKP N   +  +    LK+ DFG A
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN---LLLNTTCDLKICDFGLA 175

Query: 178 LLFEEEGGEASDDT 191
            + + +       T
Sbjct: 176 RVADPDHDHTGFLT 189

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 21/163 (12%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMI---RR 75
           P   + +    G+ +G G FG  Y    +          +A K     A     +   + 
Sbjct: 22  PDGQITV----GQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKN 69

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLR 134
           E+ + R      NI+           + +V + C+G  L+  +  ++  +  +    + R
Sbjct: 70  EVGVLRKTR-HVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
                ++  H+  ++HRDLK  N  F+   ++  +K+ DFG A
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNN-IFL--HEDNTVKIGDFGLA 167

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 75  REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSERDAAP 131
           REI I + L    NIV+L      +  + +V E     DL    D    +G      A  
Sbjct: 49  REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVC--EGGLESVTAKS 104

Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
            L  ++N +  CH   V+HRDLKP+N   +  +    LK+ DFG A  F
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQN---LLINREGELKIADFGLARAF 150

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 18/64 (28%), Positives = 34/64 (53%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
              + L+  F   D D +G ++ DELR  +  +G  L + ++  ++  AD+D +G ++Y 
Sbjct: 3   AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62

Query: 281 EFTA 284
           EF  
Sbjct: 63  EFAR 66

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 25/86 (29%)

Query: 296 EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E L  AF+ FD+D  G+   DE R                       G    ++      
Sbjct: 6   EDLQVAFRAFDQDGDGHITVDELRRA-----------------MAGLGQPLPQEE----- 43

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT 378
           L  ++ + D+D +G +++ EF  ++ 
Sbjct: 44  LDAMIREADVDQDGRVNYEEFARMLA 69

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 387 ELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
           E L+ AF+  D++ D  ITV+EL  A     +G       +  +I E   D
Sbjct: 6   EDLQVAFRAFDQDGDGHITVDELRRAMAG--LGQPLPQEELDAMIREADVD 54

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 13/115 (11%)

Query: 75  REIQIRRLLSGQ--PNIVELK-----SAHEDETAVHVVMELCQGGDL--FDRIIAKGYYS 125
           RE+ + R L     PN+V L      S  + ET + +V E     DL  +   + +    
Sbjct: 60  REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
                 ++  ++  ++  HS  V+HRDLKP+N   I    +  +K+ DFG A ++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN---ILVTSSGQIKLADFGLARIY 170

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)

Query: 30  GRMLGRGRFGVTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           G  +GRG +G  Y     +   +  YA K      +++     M   REI + R L   P
Sbjct: 26  GCKVGRGTYGHVYKAKRKDGKDDKDYALK------QIEGTGISMSACREIALLRELK-HP 78

Query: 88  NIVELKS--AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV----------LRA 135
           N++ L+       +  V ++ +  +  DL+  II     S+ +  PV          L  
Sbjct: 79  NVISLQKVFLSHADRKVWLLFDYAEH-DLW-HIIKFHRASKANKKPVQLPRGMVKSLLYQ 136

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNA--LLKVTDFGSALLF 180
           I++ ++  H+  V+HRDLKP N   +  +      +K+ D G A LF
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANI-LVMGEGPERGRVKIADMGFARLF 182

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 64.0 bits (156), Expect = 3e-11
 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 14/158 (8%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-- 84
           Y   +++G+G FG      ++  +   A K +  + +            EI+I   L   
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ-----AAEEIRILEHLRKQ 153

Query: 85  ---GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNA 139
                 N++ +         + +  EL    +L++ I    +  +S         +I+  
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           ++  H   ++H DLKPEN     +  +  +KV DFGS+
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSS 249

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 28/170 (16%), Positives = 63/170 (37%), Gaps = 25/170 (14%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +  G+ +G G FG+ YL    +     A   +    K++Y EN   +  E++  + ++ 
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV----KVEYQEN-GPLFSELKFYQRVAK 92

Query: 86  QPNIVELKSAHEDETA----VH--------------VVMELCQGGDLFDRIIAKGYYSER 127
           +  I +     + +       +              +VME   G DL       G + + 
Sbjct: 93  KDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMER-LGIDLQKISGQNGTFKKS 151

Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
               +   +++ +   H    +H D+K  N   +   +   + + D+G +
Sbjct: 152 TVLQLGIRMLDVLEYIHENEYVHGDIKAANL-LLGYKNPDQVYLADYGLS 200

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 26/171 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSGQP 87
               +G+GR+G  +  +       +  +++A K      +     R  E+    +L    
Sbjct: 12  LLECVGKGRYGEVWRGS-------WQGENVAVK-IFSSRDEKSWFRETELYNTVMLR-HE 62

Query: 88  NIVEL----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           NI+       ++    T + ++    + G L+D  +            ++ +I + +   
Sbjct: 63  NILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAHL 121

Query: 144 HS--------MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
           H           + HRDLK +N   I    N    + D G A++  +   +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKN---ILVKKNGQCCIADLGLAVMHSQSTNQ 169

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 17/167 (10%)

Query: 17  GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---- 72
           G+    V+  Y   + LG+G +G+ +   +  T    A K      K+  A  +      
Sbjct: 1   GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK------KIFDAFQNSTDAQR 54

Query: 73  IRREIQIRRLLSGQPNIVELKSAH--EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
             REI I   LSG  NIV L +    +++  V++V +  +  DL   +I           
Sbjct: 55  TFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DL-HAVIRANILEPVHKQ 112

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
            V+  ++  +   HS G++HRD+KP N   I  +    +KV DFG +
Sbjct: 113 YVVYQLIKVIKYLHSGGLLHRDMKPSN---ILLNAECHVKVADFGLS 156

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 57.7 bits (140), Expect = 6e-11
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF  
Sbjct: 31  IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 25/108 (23%)

Query: 274 NGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSH 330
           +      E        +  +  E + +AF+  DKD +GY    E R        + N+  
Sbjct: 7   HHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELR------HVMTNLGE 60

Query: 331 IYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
             TD+                 + +++ + DIDG+G +++ EFV +MT
Sbjct: 61  KLTDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 92

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG 419
           G    + +    E +   + +   ++ E + +AF+  DK+ + +I+  EL       N+G
Sbjct: 2   GSHHHHHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMT--NLG 59

Query: 420 DDAT---IKEIISEVGRD 434
           +  T   + E+I E   D
Sbjct: 60  EKLTDEEVDEMIREADID 77

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 62.3 bits (152), Expect = 7e-11
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 23/182 (12%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           ++S   R  +    +E V   Y   + +G G +G      +  T    A K      K+ 
Sbjct: 7   ARSGFYRQEVTKTAWE-VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK------KLY 59

Query: 66  YAENDMM----IRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLF 115
                 +      RE+++ + +    N++ L          +D T  ++VM    G DL 
Sbjct: 60  RPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPF-MGTDL- 116

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++      E     ++  ++  +   H+ G++HRDLKP N   ++ +++  LK+ DFG
Sbjct: 117 GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN---LAVNEDCELKILDFG 173

Query: 176 SA 177
            A
Sbjct: 174 LA 175

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 62.4 bits (152), Expect = 7e-11
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 26/171 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSGQP 87
             + +G+GR+G  ++         +  + +A K      E     R  EI    L+    
Sbjct: 41  MVKQIGKGRYGEVWMGK-------WRGEKVAVK-VFFTTEEASWFRETEIYQTVLMR-HE 91

Query: 88  NIVELKSAHEDETAVH----VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           NI+   +A    T       ++ +  + G L+D  +       +    +  + V+ +   
Sbjct: 92  NILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHL 150

Query: 144 HS--------MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
           H+          + HRDLK +N   I    N    + D G A+ F  +  E
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKN---ILVKKNGTCCIADLGLAVKFISDTNE 198

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 62.4 bits (152), Expect = 8e-11
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 23/182 (12%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
            +    R  +    +E V   Y     +G G +G      +  T +  A K      K+ 
Sbjct: 11  ERPTFYRQELNKTIWE-VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK------KLS 63

Query: 66  YAENDMM----IRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLF 115
                ++      RE+++ + +    N++ L        + E+   V++V  L  G DL 
Sbjct: 64  RPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL- 120

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + I+     ++     ++  I+  +   HS  ++HRDLKP N   ++ +++  LK+ DFG
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFG 177

Query: 176 SA 177
            A
Sbjct: 178 LA 179

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 57.2 bits (139), Expect = 8e-11
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNG 275
           ++  ++ + +   F   D + +G + +DE +  + KVG   LT+ +V++ M+ AD DGNG
Sbjct: 1   WVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNG 60

Query: 276 AIDYTEFTA 284
            ID  EF  
Sbjct: 61  VIDIPEFMD 69

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 24/91 (26%)

Query: 291 KLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF 347
           + +  E + +AF+ FD +  G    DEF+ +                  +K G       
Sbjct: 3   RQDDEEEILRAFKVFDANGDGVIDFDEFKFI-----------------MQKVGEEPLTDA 45

Query: 348 RAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                +K    + D DGNG ID  EF++L+ 
Sbjct: 46  EVEEAMK----EADEDGNGVIDIPEFMDLIK 72

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 382 KLETPELLEKAFQYLDKNSDQFITVNELETAFKE--NNMGDDATIKEIISEVGRD 434
           + +  E + +AF+  D N D  I  +E +   ++       DA ++E + E   D
Sbjct: 3   RQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADED 57

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 62.1 bits (151), Expect = 8e-11
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 26/166 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSGQP 87
               +G+GRFG  +          +  + +A K      E     R  EI    +L    
Sbjct: 46  LQESIGKGRFGEVWRGK-------WRGEEVAVK-IFSSREERSWFREAEIYQTVMLR-HE 96

Query: 88  NIVELKSAHEDETAVH----VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           NI+   +A   +        +V +  + G LFD  + +   +      +  +  + +   
Sbjct: 97  NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHL 155

Query: 144 HS--------MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           H           + HRDLK +N   I    N    + D G A+  +
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKN---ILVKKNGTCCIADLGLAVRHD 198

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 62.5 bits (152), Expect = 9e-11
 Identities = 50/214 (23%), Positives = 79/214 (36%), Gaps = 21/214 (9%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           S  +   Y    K    V  +Y    ++GRG +G  YL  + +T    A K      K+ 
Sbjct: 8   SSGRENLYFQGIKNVH-VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK------KVN 60

Query: 66  YAENDMM----IRREIQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFD 116
               D++    I REI I   L     I+ L              +++V+E+    DL  
Sbjct: 61  RMFEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKK 118

Query: 117 RIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS 176
                 + +E     +L  ++   N  H  G++HRDLKP N      + +  +KV DFG 
Sbjct: 119 LFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPAN---CLLNQDCSVKVCDFGL 175

Query: 177 ALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLT 210
           A     E      +             +  K+LT
Sbjct: 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 5   VSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM 64
           + K    +  +    +E +   Y     +G G +G      +  +    A K      K+
Sbjct: 5   IRKKGFYKQDVNKTAWE-LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK------KL 57

Query: 65  KYAENDMM----IRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDL 114
                  +      RE+ + + +    N++ L       S+  +    ++VM      DL
Sbjct: 58  SRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPF-MQTDL 115

Query: 115 FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF 174
             +I+    +SE     ++  ++  +   HS GV+HRDLKP N   ++ +++  LK+ DF
Sbjct: 116 -QKIM-GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDF 170

Query: 175 GSA 177
           G A
Sbjct: 171 GLA 173

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 62.2 bits (151), Expect = 1e-10
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 24/182 (13%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
             +Q     +    +  V+  Y   + +G G  G+     +   +   A K      K+ 
Sbjct: 44  VDNQFYSVEVGDSTFT-VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK------KLS 96

Query: 66  YAENDMM----IRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLF 115
               +        RE+ + + +    NI+ L          E+   V++VMEL    +L 
Sbjct: 97  RPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL- 153

Query: 116 DRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            ++I      ER  + +L  ++  +   HS G++HRDLKP N   I    +  LK+ DFG
Sbjct: 154 CQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFG 209

Query: 176 SA 177
            A
Sbjct: 210 LA 211

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 57.1 bits (138), Expect = 1e-10
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           +  E+ +    +F  +  D +  +S    +   TK  S L+  ++  + E +D D +GA+
Sbjct: 16  ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73

Query: 278 DYTEFTAA 285
              EF AA
Sbjct: 74  TLPEFCAA 81

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +   E     E F++ D D +G +S  E+R    K  + L    +  +    D    G 
Sbjct: 3   VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGK 60

Query: 277 IDYTEFTAA 285
           +   +F  A
Sbjct: 61  LSKDQFALA 69

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 61.3 bits (148), Expect = 3e-10
 Identities = 48/239 (20%), Positives = 81/239 (33%), Gaps = 60/239 (25%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           +     F + D DK+G++S  E+R  +   G  L    + Q++ A   D    ID+  F 
Sbjct: 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFV 665

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMVESPQTIRNVSHIYTDKAKK 338
              +      R E L K F+  D +N+G        + +     +    + H +      
Sbjct: 666 RCLV------RLEILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHY 719

Query: 339 FGL-----GNTKQFRA-----------------MNMLKKLVLQG---------------- 360
             +        +QFR                  MN+L K+V +                 
Sbjct: 720 SNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSM 779

Query: 361 ----DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
               D D  G + F EF  L  +I K +        ++  + +    I  NEL  AF+ 
Sbjct: 780 VAVMDSDTTGKLGFEEFKYLWNNIKKWQG------IYKRFETDRSGTIGSNELPGAFEA 832

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 59.0 bits (142), Expect = 2e-09
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 47/203 (23%)

Query: 219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKQLMEAAD 270
             EE +  ++ F+++    +  +S  EL   L KV +   +           + ++   D
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD 784

Query: 271 MDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRN 327
            D  G + + EF      +      +     ++ F+ D SG    +E     E+      
Sbjct: 785 SDTTGKLGFEEF------KYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAFEA------ 832

Query: 328 VSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPE 387
                       G      F     +  ++++   D  GN+DF  F++ +    +L+   
Sbjct: 833 -----------AG------FHLNQHIYSMIIRRYSDETGNMDFDNFISCLV---RLDA-- 870

Query: 388 LLEKAFQYLDKNSDQFITVNELE 410
            + +AF+ LDKN    I VN  E
Sbjct: 871 -MFRAFRSLDKNGTGQIQVNIQE 892

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           +  +  +   +TD++GT+  +EL       G  L +  +  ++     D  G +D+  F 
Sbjct: 804 KKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQ-HIYSMIIRRYSDETGNMDFDNFI 862

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           +  +      R + + +AF+  DK+ +G       E+  + 
Sbjct: 863 SCLV------RLDAMFRAFRSLDKNGTGQIQVNIQEWLQLT 897

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 49.0 bits (116), Expect = 2e-06
 Identities = 43/243 (17%), Positives = 68/243 (27%), Gaps = 58/243 (23%)

Query: 182 EEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL 241
           E   E           K   +    +        + L  EE     +         +  +
Sbjct: 491 EPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEI 550

Query: 242 SYDELRAGLTKVGSMLTEFD--------VKQLMEAADMDGNGAIDYTEFTAATIQRQKLE 293
           S  EL+  L ++ S   +           + ++   D DGNG +   EF           
Sbjct: 551 SVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEF------NILWN 604

Query: 294 RSEYLSKAFQYFDKDNSGY---DEFRAMVE------SPQTIRNVSHIYTDKAKKFGLGNT 344
           R       F+ FD D SG     E R  +E        Q  + +   +            
Sbjct: 605 RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA----------- 653

Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI 404
                             D    IDF  FV  +    +LE    L K F+ LD  +   I
Sbjct: 654 ------------------DDELIIDFDNFVRCLV---RLEI---LFKIFKQLDPENTGTI 689

Query: 405 TVN 407
            ++
Sbjct: 690 QLD 692

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 24/181 (13%)

Query: 7   KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY 66
            +      I    +  V+  Y   + +G G  G+     +       A K      K+  
Sbjct: 8   DNNFYSVEIGDSTFT-VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK------KLSR 60

Query: 67  AENDMM----IRREIQIRRLLSGQPNIVELK------SAHEDETAVHVVMELCQGGDLFD 116
              +        RE+ + + +    NI+ L        + E+   V++VMEL    +L  
Sbjct: 61  PFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANL-C 117

Query: 117 RIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS 176
           ++I      ER  + +L  ++  +   HS G++HRDLKP N   I    +  LK+ DFG 
Sbjct: 118 QVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFGL 173

Query: 177 A 177
           A
Sbjct: 174 A 174

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 22/186 (11%)

Query: 6   SKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK 65
           +K +     ++ + +  +   Y+  R +  G +G       +S  +P A K +       
Sbjct: 4   AKGEAAMRDLIAELHA-MQSPYTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDG 61

Query: 66  YAEN---DMM----IRREIQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGD 113
              N   D      + REI++       PNI+ L+             +++V EL    D
Sbjct: 62  RTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTD 119

Query: 114 LFDRIIAKGYY--SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
           L  ++I       S +     +  I+  ++V H  GV+HRDL P N   I   DN  + +
Sbjct: 120 L-AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN---ILLADNNDITI 175

Query: 172 TDFGSA 177
            DF  A
Sbjct: 176 CDFNLA 181

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 16/161 (9%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS- 84
            Y    ++G+G FG      +       A K +  K            + E+++  L++ 
Sbjct: 55  RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ-----AQIEVRLLELMNK 109

Query: 85  ----GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVN 138
                +  IV LK        + +V E+    +L+D +    +   S        + +  
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168

Query: 139 AVNVCHS--MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           A+    +  + ++H DLKPEN    +   +A +K+ DFGS+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSS 208

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 26/167 (15%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS------ 84
           R LG G F   +L  +   N   A K +  +    Y E       EI++ + ++      
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIV--RGDKVYTEAAED---EIKLLQRVNDADNTK 79

Query: 85  ----GQPNIVELKSA--HEDETAVHV--VMELCQGGDLFDRIIAKGY--YSERDAAPVLR 134
               G  +I++L     H+    VHV  V E+  G +L   I    +          + +
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISK 138

Query: 135 AIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNAL---LKVTDFGSA 177
            ++  ++  H   G++H D+KPEN      D       +K+ D G+A
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 20/184 (10%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREIQ 78
           ++   +    +LG G +GV    T   T    A K      K++  +  +      REI+
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK------KIEPFDKPLFALRTLREIK 61

Query: 79  IRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL 133
           I +      NI+ +       + E+   V+++ EL    DL  R+I+    S+      +
Sbjct: 62  ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQEL-MQTDL-HRVISTQMLSDDHIQYFI 118

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
              + AV V H   V+HRDLKP N   +  + N  LKV DFG A + +E   + S+ T  
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSN---LLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175

Query: 194 ILRM 197
              M
Sbjct: 176 QSGM 179

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 56.9 bits (137), Expect = 8e-10
 Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 37/195 (18%)

Query: 222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD------VKQLMEAADMDGNG 275
            +         +   +   +   +L+  L +        D       + L+   ++  NG
Sbjct: 3   SSHHHHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61

Query: 276 AIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
            +D  EF     +    +        FQ     + G      + +             + 
Sbjct: 62  RLDQEEFARLWKRLVHYQ------HVFQKVQ-TSPGVLLSSDLWK----------AIENT 104

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQY 395
               G            L  LV     D  G + F   V  +    +LE    + K F+ 
Sbjct: 105 DFLRG------IFISRELLHLVTLRYSDSVGRVSFPSLVCFLM---RLEA---MAKTFRN 152

Query: 396 LDKNSDQFITVNELE 410
           L K+    + + E+E
Sbjct: 153 LSKDGK-GLYLTEME 166

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 51.5 bits (123), Expect = 6e-08
 Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 14/104 (13%)

Query: 223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF---DVKQLMEAADMDGNGAIDY 279
               +  F ++     G L   +L   +     +   F   ++  L+     D  G + +
Sbjct: 75  LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRVSF 133

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSG----YDEFRAMV 319
                  +      R E ++K F+   KD  G      E+ ++V
Sbjct: 134 PSLVCFLM------RLEAMAKTFRNLSKDGKGLYLTEMEWMSLV 171

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 56.8 bits (137), Expect = 9e-10
 Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 56/220 (25%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-F 260
           SKLK   V+ +    Y   +E Q   + F  +    +G L     +    +         
Sbjct: 6   SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 63

Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
               +    D + +G I+++EF  A     +    E L  AF+ +D DN GY   +E   
Sbjct: 64  FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +V                             A+  +    ++   +              
Sbjct: 124 IV----------------------------DAIYQMVGNTVELPEEE------------- 142

Query: 378 TDIYKLETPELL-EKAFQYLDKNSDQFITVNELETAFKEN 416
                  TPE   ++ F  +DKN+D  +T+ E +   K +
Sbjct: 143 ------NTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD 176

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 24/155 (15%), Positives = 53/155 (34%), Gaps = 20/155 (12%)

Query: 198 KQFRRMSKLKKLTVKVIVE-----YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           K F +     +L      +     +  G+ T+     F   D +K+G + + E    L+ 
Sbjct: 32  KGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSV 91

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEF------------TAATIQRQKLERSEYLSK 300
                 +  ++   +  D+D +G I   E                 +  ++    + + +
Sbjct: 92  TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDR 151

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIY 332
            F   DK+  G     EF+   ++  +I     +Y
Sbjct: 152 IFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLY 186

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK------ 414
           D + +G I+F EF+  ++   +    E L  AF+  D ++D +IT NE+           
Sbjct: 73  DENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV 132

Query: 415 ---ENNMGDDATIKEIISEV 431
                   ++ T ++ +  +
Sbjct: 133 GNTVELPEEENTPEKRVDRI 152

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +P       ++ F   D   +G L+  + R  L +  S L +  +  +   +D+D +G 
Sbjct: 7   AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGK 64

Query: 277 IDYTEFTAA 285
           +   EF  A
Sbjct: 65  LTAEEFILA 73

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 25/177 (14%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
               LG G++G  Y       ++  A K++ K+  M     + +  +E  + + +   PN
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTM--EVEEFL--KEAAVMKEIK-HPN 277

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVC-- 143
           +V+L      E   +++ E    G+L D       Y             ++  A  +   
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLD-------YLRECNRQEVSAVVLLYMATQISSA 330

Query: 144 ----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILR 196
                    +HR+L   N C +   +N L+KV DFG + L   +   A       ++
Sbjct: 331 MEYLEKKNFIHRNLAARN-CLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           +  E+ Q    +F  +  D NG +     +   TK  S L   ++  + E +D D +GA+
Sbjct: 3   ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGAL 60

Query: 278 DYTEFTAA 285
              EF AA
Sbjct: 61  TLDEFCAA 68

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 27/186 (14%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQI 79
           D+   Y   + LG G  G+ +   +N  +   A K      K+   +   +    REI+I
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK------KIVLTDPQSVKHALREIKI 61

Query: 80  RRLLSGQPNIVELK--------------SAHEDETAVHVVMELCQGGDLFDRIIAKGYYS 125
            R L    NIV++                +  +  +V++V E     DL   ++ +G   
Sbjct: 62  IRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-METDL-ANVLEQGPLL 118

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
           E  A   +  ++  +   HS  V+HRDLKP N    +  ++ +LK+ DFG A + +    
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYS 176

Query: 186 EASDDT 191
                +
Sbjct: 177 HKGHLS 182

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 26/159 (16%)

Query: 29  FGRMLGRGRFGVTYLC----TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             R LG G FG   L     T + T    A K++ K        +     +EI I R L 
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWK--QEIDILRTLY 91

Query: 85  GQPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
              +I++ K         ++ +VME    G L D       Y  R +  + + ++ A  +
Sbjct: 92  -HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQI 143

Query: 143 C------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           C      H+   +HRDL   N   +   ++ L+K+ DFG
Sbjct: 144 CEGMAYLHAQHYIHRDLAARN-VLLD--NDRLVKIGDFG 179

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 29  FGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           F + LG+G FG   +C     +++T    A K +  +   +    D    REI+I + L 
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFE--REIEILKSLQ 100

Query: 85  GQPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
              NIV+ K          + ++ME    G L D      Y  +         ++     
Sbjct: 101 -HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQ 153

Query: 142 VC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +C       +   +HRDL   N   +   +   +K+ DFG
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRN-ILVE--NENRVKIGDFG 190

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 29  FGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           +   LG+G FG   LC      ++T    A K +  +      + D    REIQI + L 
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQ--REIQILKALH 82

Query: 85  GQPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
               IV+ +  S      ++ +VME    G L D      +     A      ++  +  
Sbjct: 83  -SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD------FLQRHRARLDASRLLLYSSQ 135

Query: 142 VC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +C       S   +HRDL   N   +     A +K+ DFG
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARN-ILVE--SEAHVKIADFG 172

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 55.8 bits (135), Expect = 7e-09
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 29  FGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           F + LG+G FG   +C     +++T    A K +  +   +    D    REI+I + L 
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFE--REIEILKSLQ 69

Query: 85  GQPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
              NIV+ K          + ++ME    G L D      Y  +         ++     
Sbjct: 70  -HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQ 122

Query: 142 VC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +C       +   +HRDL   N   +   +   +K+ DFG
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRN-ILVE--NENRVKIGDFG 159

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 51.5 bits (124), Expect = 7e-09
 Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML------TEFDVKQLMEAADM 271
           +  +    L+  F ++D + +G ++  EL+  +  + +         +    +L++ AD 
Sbjct: 1   MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60

Query: 272 DGNGAIDYTEFTA 284
           + +G I   EF  
Sbjct: 61  NSDGKISKEEFLN 73

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 19/91 (20%)

Query: 293 ERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           +    L  AF+  D +  GY    E +  + +    + +S     +A             
Sbjct: 4   KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEA------------- 50

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
                KL+   D + +G I   EF+N   ++
Sbjct: 51  ---SAKLIKMADKNSDGKISKEEFLNANAEL 78

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 26/160 (16%)

Query: 29  FGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             R LG G FG   LC      ++T    A KS+ K         D+   +EI+I R L 
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLK--KEIEILRNLY 81

Query: 85  GQPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
              NIV+ K     +    + ++ME    G L +      Y  +      L+  +  AV 
Sbjct: 82  -HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE------YLPKNKNKINLKQQLKYAVQ 134

Query: 142 VC------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +C       S   +HRDL   N   +       +K+ DFG
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARN-VLVE--SEHQVKIGDFG 171

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 30/194 (15%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ- 86
               ++GRGR+G  Y  +          + +A K    +A        E  I R+   + 
Sbjct: 16  KLLELIGRGRYGAVYKGS-------LDERPVAVK-VFSFANRQNF-INEKNIYRVPLMEH 66

Query: 87  PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            NI        +   +      +VME    G L    ++        +  +  ++   + 
Sbjct: 67  DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLA 125

Query: 142 VCHSM---------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
             H+           + HRDL   N   +   ++    ++DFG ++           +  
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRN---VLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182

Query: 193 VILRMKQ--FRRMS 204
                +    R M+
Sbjct: 183 NAAISEVGTIRYMA 196

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 25/167 (14%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            FG+ LG G FG     T     +    +  A K M K       +  +M   E++I   
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALM--SELKIMSH 105

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPVLRA-- 135
           L    NIV L  A      V V+ E C  GDL +       + +   +   A        
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 136 -IVNAVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +  +  V        S   +HRD+   N   ++  +  + K+ DFG
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARN-VLLT--NGHVAKIGDFG 209

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 22/170 (12%)

Query: 26  HYSFGRMLGRGRFGVTYL--------CTENSTNMPYACKSMAKKPKMKYAENDMMIRR-- 75
            +       R   G+ Y         C        ++ K  AK  ++   E +   R   
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFN-EQNFFQRAAK 101

Query: 76  --EIQIRRLLSGQPNI----VELKSAHEDETAVHVVMELCQGGDLFD--RIIAKGYYSER 127
             ++   + L   P +          H+D+    +V+    G  L     +  K   SER
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRF-LVLPS-LGRSLQSALDVSPKHVLSER 159

Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
               V   +++A+   H    +H ++  EN   +  +D + + +  +G A
Sbjct: 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIF-VDPEDQSQVTLAGYGFA 208

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 25/165 (15%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           +    LG G++G  Y       ++  A K++ K+  M     + +  +E  + + +   P
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTM--EVEEFL--KEAAVMKEIK-HP 69

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVCH 144
           N+V+L      E   +++ E    G+L D       Y             ++  A  +  
Sbjct: 70  NLVQLLGVCTREPPFYIITEFMTYGNLLD-------YLRECNRQEVSAVVLLYMATQISS 122

Query: 145 ------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                     +HRDL   N C +   +N L+KV DFG + L   +
Sbjct: 123 AMEYLEKKNFIHRDLAARN-CLVG--ENHLVKVADFGLSRLMTGD 164

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 26/168 (15%)

Query: 28  SFGRMLGRGRFGV----TYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
              ++LG G FG      ++       +P A K + ++     A  +++   E  +   +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEIL--DEAYVMASV 74

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
              P++  L       T V ++ +L   G L D      Y  E       + ++N  V +
Sbjct: 75  D-NPHVCRLLGICLTST-VQLITQLMPFGCLLD------YVREHKDNIGSQYLLNWCVQI 126

Query: 143 CH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEE 183
                      ++HRDL   N   +       +K+TDFG + LL  EE
Sbjct: 127 AKGMNYLEDRRLVHRDLAARN-VLVK--TPQHVKITDFGLAKLLGAEE 171

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 42/183 (22%), Positives = 62/183 (33%), Gaps = 42/183 (22%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   R +G G FG   LC        YA K +    K   +      + E  I + +   
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA-----KIEADILKKIQND 91

Query: 87  P----NIVELKSA--HEDETAVHV--VMELCQGGDLFDRIIAKGY--YSERDAAPVLRAI 136
                NIV+      + D    H+  + E   G  L++ I    Y  +   D       I
Sbjct: 92  DINNNNIVKYHGKFMYYD----HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146

Query: 137 VNAVNVCHSMGVMHRDLKPEN----------------------FCFISRDDNALLKVTDF 174
           + A+N    M + H DLKPEN                         I R  +  +K+ DF
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206

Query: 175 GSA 177
           G A
Sbjct: 207 GCA 209

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 21/163 (12%)

Query: 28  SFGRMLGRGRFGVTYLCT---ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           + GRMLG+G FG         E+ + +  A K +           + +  RE    +   
Sbjct: 26  TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL--REAACMKEFD 83

Query: 85  GQPNIVEL------KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
             P++ +L        A        V++   + GDL   ++A          P+   +  
Sbjct: 84  -HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142

Query: 139 AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            V++        S   +HRDL   N C ++  ++  + V DFG
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARN-CMLA--EDMTVCVADFG 182

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 24/159 (15%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
            F  ++GRG FG  Y   L   +   +  A KS+  +       +  +   E  I +  S
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFL--TEGIIMKDFS 84

Query: 85  GQPNIVELKSA-HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
             PN++ L       E +  VV+   + GDL      + +       P ++ ++   + V
Sbjct: 85  -HPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQV 137

Query: 143 CH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   S   +HRDL   N C +   +   +KV DFG
Sbjct: 138 AKGMKYLASKKFVHRDLAARN-CMLD--EKFTVKVADFG 173

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 23/163 (14%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           +F + LG G+FGV             A K + K+  M  +E++ +   E ++   LS   
Sbjct: 27  TFLKELGTGQFGVVKYGKWR-GQYDVAIKMI-KEGSM--SEDEFI--EEAKVMMNLS-HE 79

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH-- 144
            +V+L      +  + ++ E    G L +      Y  E       + ++    +VC   
Sbjct: 80  KLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAM 133

Query: 145 ----SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
               S   +HRDL   N C ++  D  ++KV+DFG +    ++
Sbjct: 134 EYLESKQFLHRDLAARN-CLVN--DQGVVKVSDFGLSRYVLDD 173

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           +F + +G G+FG+ +L    + +   A K++ ++  M  +E D +   E ++   LS  P
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAM--SEEDFI--EEAEVMMKLS-HP 63

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH-- 144
            +V+L     ++  + +V E  + G L D      Y   +        ++   ++VC   
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSD------YLRTQRGLFAAETLLGMCLDVCEGM 117

Query: 145 ----SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  V+HRDL   N C +   +N ++KV+DFG      ++
Sbjct: 118 AYLEEACVIHRDLAARN-CLVG--ENQVIKVSDFGMTRFVLDD 157

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 23/163 (14%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
           +  + LG G+FGV  L          A K + K+  M  +E++    +E Q    LS  P
Sbjct: 11  TLLKELGSGQFGVVKLGKWK-GQYDVAVKMI-KEGSM--SEDEFF--QEAQTMMKLS-HP 63

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH-- 144
            +V+       E  +++V E    G L +      Y            ++    +VC   
Sbjct: 64  KLVKFYGVCSKEYPIYIVTEYISNGCLLN------YLRSHGKGLEPSQLLEMCYDVCEGM 117

Query: 145 ----SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
               S   +HRDL   N C +    +  +KV+DFG      ++
Sbjct: 118 AFLESHQFIHRDLAARN-CLVD--RDLCVKVSDFGMTRYVLDD 157

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 53.7 bits (128), Expect = 7e-08
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 12/115 (10%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
           Q  ++ + E+D D++GT++  E+R  L + G  L    + Q++ A   D    ID+  F 
Sbjct: 605 QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFV 663

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMVESPQTIRNVSHIYT 333
              +      R E L K F+  D +N+G        + +     +    + H + 
Sbjct: 664 RCLV------RLEILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAALEHHHH 712

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 46.3 bits (109), Expect = 1e-05
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 46/242 (19%)

Query: 180 FEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG 239
              E  +  D    +   K+    +   ++   +       E+      +       ++ 
Sbjct: 487 STFEPHKNGDFCIRVFSEKKADYQTVDDEIEANIEEIEANEEDIGDGFRRLFAQLAGEDA 546

Query: 240 TLSYDELRAGLTKVGSMLTEFD--------VKQLMEAADMDGNGAIDYTEFTAATIQRQK 291
            +S  EL+  L +V +   +           K +++  D DG+G +   EF         
Sbjct: 547 EISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF------YIL 600

Query: 292 LERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR 348
             + +   K ++  D D SG     E R  +E                 + G      F+
Sbjct: 601 WTKIQKYQKIYREIDVDRSGTMNSYEMRKALE-----------------EAG------FK 637

Query: 349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
               L ++++    D    IDF  FV  +    +LE    L K F+ LD  +   I ++ 
Sbjct: 638 LPCQLHQVIVARFADDELIIDFDNFVRCLV---RLEI---LFKIFKQLDPENTGTIQLDL 691

Query: 409 LE 410
           + 
Sbjct: 692 IS 693

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 40/171 (23%), Positives = 59/171 (34%), Gaps = 29/171 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           SFG+ LG G FG     T     ++   M  A K M K          +M   E+++   
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALM--SELKVLSY 82

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD------------RIIAKGYYSERDAA 130
           L    NIV L  A        V+ E C  GDL +            +        +  A 
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 131 PVLRAIVNAVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +   +  +  V        S   +HRDL   N   ++     + K+ DFG
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN-ILLT--HGRITKICDFG 190

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 34/176 (19%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            FG++LG G FG     T     +   ++  A K M K+         +M   E+++   
Sbjct: 48  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK-MLKEKADSSEREALM--SELKMMTQ 104

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPVLRAIV 137
           L    NIV L  A      ++++ E C  GDL +     R        E +    L    
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 138 NAVNVCH------------------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           +   +                        +HRDL   N   ++     ++K+ DFG
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN-VLVT--HGKVVKICDFG 217

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 23/165 (13%)

Query: 29  FGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
             +++G G  G      L      ++P A K++ K    +    D +   E  I      
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFL--SEASIMGQFD- 108

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH 144
            PNI+ L+          +V E  + G L        +    D    +  +V     V  
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDT------FLRTHDGQFTIMQLVGMLRGVGA 162

Query: 145 ------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  +G +HRDL   N   +    N + KV+DFG + + E++
Sbjct: 163 GMRYLSDLGYVHRDLAARN-VLVD--SNLVCKVSDFGLSRVLEDD 204

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 18/168 (10%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPK--------MKYAENDMM 72
            +  G  +G+G FG  YL   NS     ++ P   K                + A     
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 73  IRREIQIRRL-LSGQPNIVELKSAHEDETAVHV-VMELCQGGDLFDRIIAKGY-YSERDA 129
           I++ I+ R+L   G P         ++  +    +M+   G DL     A    +S +  
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDR-FGSDLQKIYEANAKRFSRKTV 154

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
             +   I++ +   H    +H D+K  N   ++  +   + + D+G A
Sbjct: 155 LQLSLRILDILEYIHEHEYVHGDIKASNL-LLNYKNPDQVYLVDYGLA 201

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 20/162 (12%)

Query: 28  SFGRMLGRGRFGVTYLCT---ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             G++LG G FG         E+ T++  A K+M K       E +  +  E    +  S
Sbjct: 37  ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLS-EAACMKDFS 94

Query: 85  GQPNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA 139
             PN++ L     + + +      V++   + GDL   ++     +     P+   +   
Sbjct: 95  -HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153

Query: 140 VNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           V++        +   +HRDL   N C +   D+  + V DFG
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARN-CMLR--DDMTVCVADFG 192

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 26/202 (12%), Positives = 70/202 (34%), Gaps = 41/202 (20%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIE--------MDTDKNGTLSYDELRAGLTKVG 254
           +++ + LT      +L  +E      +F E        +++     + ++++ +      
Sbjct: 5   LAEYQDLT------FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA 58

Query: 255 SMLTEFDVKQLMEAADMD-GNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +   E     +           ++ + +F    ++             AF+ FD D+ G 
Sbjct: 59  NPFKER----ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGT 114

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              ++   +V         + +   + K+            N+L++     DID +G I+
Sbjct: 115 LNREDLSRLVNCLTGEGEDTRLSASEMKQ---------LIDNILEES----DIDRDGTIN 161

Query: 370 FIEFVNLMTDIYKLETPELLEK 391
             EF ++++      +P+    
Sbjct: 162 LSEFQHVIS-----RSPDFASS 178

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 13/76 (17%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 363 DGNGNIDFIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSDQFITVNELETAFK------E 415
               ++ F +F++L++      TP++    AF+  D + D  +   +L           E
Sbjct: 73  PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 132

Query: 416 NNMGDDATIKEIISEV 431
           +     + +K++I  +
Sbjct: 133 DTRLSASEMKQLIDNI 148

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 24/165 (14%)

Query: 29  FGRMLGRGRFGVTYLCT--ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           F  ++G G FG        ++   M  A K M K+   K    D     E+++   L   
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFA--GELEVLCKLGHH 85

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFD---------RIIAKGYYSERDAAPVLRAIV 137
           PNI+ L  A E    +++ +E    G+L D            A    +   +    + ++
Sbjct: 86  PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145

Query: 138 N-AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
           + A +V            +HRDL   N   +   +N + K+ DFG
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARN-ILVG--ENYVAKIADFG 187

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 24/159 (15%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
            F  ++GRG FG  Y   L   +   +  A KS+  +       +  +   E  I +  S
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFL--TEGIIMKDFS 148

Query: 85  GQPNIVELKSA-HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
             PN++ L       E +  VV+   + GDL      + +       P ++ ++   + V
Sbjct: 149 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQV 201

Query: 143 CH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   S   +HRDL   N C +  D+   +KV DFG
Sbjct: 202 AKGMKFLASKKFVHRDLAARN-CML--DEKFTVKVADFG 237

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 24/166 (14%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             GR +G G+FG  +     +  +  +  A K+  K           +  +E    R   
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFL--QEALTMRQFD 74

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
             P+IV+L     +   V ++MELC  G+L        +   R  +  L +++  A  + 
Sbjct: 75  -HPHIVKLIGVITENP-VWIIMELCTLGELRS------FLQVRKYSLDLASLILYAYQLS 126

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  S   +HRD+   N   +S   N  +K+ DFG +   E+ 
Sbjct: 127 TALAYLESKRFVHRDIAARN-VLVS--SNDCVKLGDFGLSRYMEDS 169

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 29/171 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-------ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           + G+ LG G FG   +         +    +  A K + K    +   +D++   E+++ 
Sbjct: 38  TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLV--SEMEMM 94

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPV--- 132
           +++    NI+ L  A   +  ++V++E    G+L +     R     Y  + +  P    
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 133 -LRAIVN-AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             + +V+    +        S   +HRDL   N   ++  +N ++K+ DFG
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARN-VLVT--ENNVMKIADFG 202

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 24/166 (14%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             GR +G G+FG  +     +  +  M  A K+  K           +  +E    R   
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFL--QEALTMRQFD 449

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
             P+IV+L     +   V ++MELC  G+L        +   R  +  L +++  A  + 
Sbjct: 450 -HPHIVKLIGVITENP-VWIIMELCTLGELRS------FLQVRKFSLDLASLILYAYQLS 501

Query: 144 ------HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  S   +HRD+   N   +S   N  +K+ DFG +   E+ 
Sbjct: 502 TALAYLESKRFVHRDIAARN-VLVS--SNDCVKLGDFGLSRYMEDS 544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 29/171 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-------ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
             G+ LG G FG   L         + +     A K + K    +   +D++   E+++ 
Sbjct: 72  VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLI--SEMEMM 128

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-------RIIAKGYYSERDAAPVL 133
           +++    NI+ L  A   +  ++V++E    G+L +         +   Y    +    L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 134 RA---IVNAVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +   +  A  V        S   +HRDL   N   ++  ++ ++K+ DFG
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARN-VLVT--EDNVMKIADFG 236

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 29  FGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
             R LG+G FG+ Y        ++      A K    +        + +   E  + +  
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK-TVNEAASMRERIEFL--NEASVMKEF 85

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
               ++V L           V+MEL   GDL   + +       +      ++   + + 
Sbjct: 86  -NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144

Query: 144 H----------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                      +   +HRDL   N C ++  ++  +K+ DFG
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARN-CMVA--EDFTVKIGDFG 183

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 38/179 (21%), Positives = 62/179 (34%), Gaps = 38/179 (21%)

Query: 27  YSFGRMLGRGRFGVTYLCTEN-STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL-- 83
           Y     LG G FG    C ++       A K +    K + A      R EI + + +  
Sbjct: 21  YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-----RLEINVLKKIKE 75

Query: 84  ---SGQPNIVELKSA--HEDETAVHV--VMELCQGGDLFDRIIAKGY--YSERDAAPVLR 134
                +   V +            H+    EL  G + F+ +    +  Y       +  
Sbjct: 76  KDKENKFLCVLMSDWFNFHG----HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 130

Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRD----------------DNALLKVTDFGSA 177
            + +A+   H   + H DLKPEN  F++ +                 N  ++V DFGSA
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 25/159 (15%)

Query: 28  SFGRMLGRGRFGV----TYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
              ++LG G FG      ++       +P A K + ++     A  +++   E  +   +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEIL--DEAYVMASV 74

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNV 142
              P++  L       T V ++ +L   G L D      Y  E       + ++N  V +
Sbjct: 75  D-NPHVCRLLGICLTST-VQLITQLMPFGCLLD------YVREHKDNIGSQYLLNWCVQI 126

Query: 143 C------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                      ++HRDL   N   +       +K+TDFG
Sbjct: 127 AKGMNYLEDRRLVHRDLAARN-VLVK--TPQHVKITDFG 162

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 28/168 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
                LG G FG  +L            M  A K++  K   + A  D    RE ++  +
Sbjct: 44  VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQ--REAELLTM 99

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPVLRAIV 137
           L    +IV       +   + +V E  + GDL          AK      D AP    + 
Sbjct: 100 LQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158

Query: 138 NAVNVCH----------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             + V             +  +HRDL   N C +      ++K+ DFG
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRN-CLVG--QGLVVKIGDFG 203

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 24/166 (14%)

Query: 29  FGRMLGRGRFGV----TYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             +++G G FG         +     +P A K++ K    +    D +   E  I    S
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFL--GEAGIMGQFS 104

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
              NI+ L+        + ++ E  + G L        +  E+D    +  +V     + 
Sbjct: 105 -HHNIIRLEGVISKYKPMMIITEYMENGALDK------FLREKDGEFSVLQLVGMLRGIA 157

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  +M  +HRDL   N   ++   N + KV+DFG + + E++
Sbjct: 158 AGMKYLANMNYVHRDLAARN-ILVN--SNLVCKVSDFGLSRVLEDD 200

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 37/188 (19%), Positives = 60/188 (31%), Gaps = 42/188 (22%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSGQ 86
               +  RGRFG  +     +  +  A K           +        E+     +   
Sbjct: 27  QLLEVKARGRFGCVWKAQLLNEYV--AVK------IFPIQDKQSWQNEYEVYSLPGMK-H 77

Query: 87  PNIVELKSAHEDETAVHV----VMELCQGGDLFD-------------RI---IAKGY-YS 125
            NI++   A +  T+V V    +    + G L D              I   +A+G  Y 
Sbjct: 78  ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAY- 136

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
                  L   +  +   H   + HRD+K +N   +   +N    + DFG AL FE    
Sbjct: 137 -------LHEDIPGLKDGHKPAISHRDIKSKN---VLLKNNLTACIADFGLALKFEAGKS 186

Query: 186 EASDDTSV 193
                  V
Sbjct: 187 AGDTHGQV 194

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
              R+LG G FG  Y           +  A K+  KK      +   M   E  I + L 
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFM--SEAVIMKNLD 71

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
             P+IV+L    E+E    ++MEL   G+L        Y      +  +  +V  ++ +C
Sbjct: 72  -HPHIVKLIGIIEEEP-TWIIMELYPYGELGH------YLERNKNSLKVLTLVLYSLQIC 123

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                  S+  +HRD+   N   ++      +K+ DFG +   E+E
Sbjct: 124 KAMAYLESINCVHRDIAVRN-ILVA--SPECVKLGDFGLSRYIEDE 166

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 48.4 bits (115), Expect = 3e-07
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 16/93 (17%)

Query: 244 DELRAGLTKVGSMLTEFDVK-QLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS--- 299
           + L   + K  + ++  +++    +  D DGN  +D  E + A     K E SE      
Sbjct: 51  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110

Query: 300 ---------KAFQYFDKDNSG---YDEFRAMVE 320
                       +  DK+N G   Y EF   ++
Sbjct: 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 45.3 bits (107), Expect = 4e-06
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 12/68 (17%)

Query: 230 FIEMDTDKNGTLSYDELRAGLT--------KVGSMLTEFDVKQL----MEAADMDGNGAI 277
           F   D D N  L   EL   +T        +   +++E ++  +    +   D + +G I
Sbjct: 74  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133

Query: 278 DYTEFTAA 285
           DY EF  +
Sbjct: 134 DYAEFAKS 141

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 41.5 bits (97), Expect = 8e-05
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 25/130 (19%)

Query: 303 QYFDKDNSGYDEFRAMVESPQTIRNVSHI---YTDKAKKFGLGNT---KQFRAMNMLKKL 356
              ++  + + +  +M     T+ +  HI         K     +    Q     M    
Sbjct: 21  HMLEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMH--- 77

Query: 357 VLQGDIDGNGNIDFIEFVNLMTDIYKLETPE------------LLEKAFQYLDKNSDQFI 404
               D DGN  +D +E    +T ++K E  E            +++   +  DKN+D +I
Sbjct: 78  ----DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133

Query: 405 TVNELETAFK 414
              E   + +
Sbjct: 134 DYAEFAKSLQ 143

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 29/170 (17%)

Query: 29  FGRMLGRGRFGVTYLCT-------ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
            G+ LG G FG   +         +    +  A K + K    +   +D++   E+++ +
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLV--SEMEMMK 141

Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPV---- 132
           ++    NI+ L  A   +  ++V++E    G+L +     R     Y  + +  P     
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201

Query: 133 LRAIVN-AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            + +V+    +        S   +HRDL   N   ++  +N ++K+ DFG
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARN-VLVT--ENNVMKIADFG 248

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 46/175 (26%), Positives = 65/175 (37%), Gaps = 30/175 (17%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPY-ACKSMAKKPKMKYAENDMMIRREIQIRRLL-- 83
           Y     LG G FG    C ++     + A K +    +   A      R EIQ+   L  
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA-----ARSEIQVLEHLNT 70

Query: 84  ---SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVN 138
              +     V++    E    + +V EL  G   +D I   G+  +       +   I  
Sbjct: 71  TDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129

Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD----------------DNALLKVTDFGSA 177
           +VN  HS  + H DLKPEN  F+  D                 N  +KV DFGSA
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 34/169 (20%), Positives = 57/169 (33%), Gaps = 28/169 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            F   LG  RFG  Y                A K   K         +     E  +R  
Sbjct: 12  RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIK-TLKDKAEGPLREEFR--HEAMLRAR 68

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           L   PN+V L      +  + ++   C  GDL + ++ +  +S+  +    R + +A+  
Sbjct: 69  LQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127

Query: 143 CH----------------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                             S  V+H+DL   N   +   D   +K++D G
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRN-VLVY--DKLNVKISDLG 173

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 23/158 (14%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
           S  +++G G FG      L   +   +  A K++ K    +    D +   E  I     
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFL--GEASIMGQFD 104

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
             PNI+ L+        V +V E  + G L        +  + DA   +  +V     + 
Sbjct: 105 -HPNIIRLEGVVTKSKPVMIVTEYMENGSLDS------FLRKHDAQFTVIQLVGMLRGIA 157

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                   MG +HRDL   N   I+   N + KV+DFG
Sbjct: 158 SGMKYLSDMGYVHRDLAARN-ILIN--SNLVCKVSDFG 192

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           +  R LG G FG  Y         + + +  A K++  +   +  E D +   E  I   
Sbjct: 33  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFL--MEALIISK 89

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
            +   NIV             ++MEL  GGDL   +        + ++  +  +++ A +
Sbjct: 90  FN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148

Query: 142 VCH------SMGVMHRDLKPENFCFIS-RDDNALLKVTDFG 175
           +            +HRD+   N C ++      + K+ DFG
Sbjct: 149 IACGCQYLEENHFIHRDIAARN-CLLTCPGPGRVAKIGDFG 188

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 28/170 (16%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
             G+ LGRG FG           + +T    A K M K+         +M   E++I   
Sbjct: 30  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALM--SELKILIH 86

Query: 83  LSGQPNIVELKSA-HEDETAVHVVMELCQGGDLFD-------RIIAKGYYSERDAAPVLR 134
           +    N+V L  A  +    + V++E C+ G+L           +      E      L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146

Query: 135 A---IVNAVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
               I  +  V        S   +HRDL   N   +S  +  ++K+ DFG
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARN-ILLS--EKNVVKICDFG 193

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 46.8 bits (111), Expect = 7e-07
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           EE     ++F  +    +G ++ D+ R    +  S L +  + Q+   ADM+ +G +D  
Sbjct: 30  EERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRMDQV 86

Query: 281 EFTAA 285
           EF+ A
Sbjct: 87  EFSIA 91

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
           +  R LG G FG  Y         + + +  A K++  +   +  E D +   E  I   
Sbjct: 74  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFL--MEALIISK 130

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVN 141
            +   NIV             +++EL  GGDL   +        + ++  +  +++ A +
Sbjct: 131 FN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189

Query: 142 VCH------SMGVMHRDLKPENFCFIS-RDDNALLKVTDFG 175
           +            +HRD+   N C ++      + K+ DFG
Sbjct: 190 IACGCQYLEENHFIHRDIAARN-CLLTCPGPGRVAKIGDFG 229

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 29/169 (17%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
              R LG G FG  +L            M  A K++  K     A  D    RE ++   
Sbjct: 18  VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL--KDPTLAARKDFQ--REAELLTN 73

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD---------RIIAKGYYSERDAAPVL 133
           L    +IV+      D   + +V E  + GDL            I+  G   +      L
Sbjct: 74  LQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132

Query: 134 RAIVN-AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
             +++ A  +        S   +HRDL   N C +    N L+K+ DFG
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRN-CLVG--ANLLVKIGDFG 178

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 26/203 (12%), Positives = 69/203 (33%), Gaps = 37/203 (18%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEM--------DTDKNGTLSYDELRAGLTKV 253
           S+L K  +    +  +L  +E      +F E+        ++     + ++++ +     
Sbjct: 29  SRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELK 88

Query: 254 GSMLTEFDVKQLMEAADMD-GNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSG 311
            +   E    ++           ++ + +F    ++             AF+ FD D+ G
Sbjct: 89  ANPFKE----RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDG 144

Query: 312 Y---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI 368
               ++   +V         + +              +    N+L++     DID +G I
Sbjct: 145 TLNREDLSRLVNCLTGEGEDTRLSAS---------EMKQLIDNILEES----DIDRDGTI 191

Query: 369 DFIEFVNLMTDIYKLETPELLEK 391
           +  EF ++++      +P+    
Sbjct: 192 NLSEFQHVIS-----RSPDFASS 209

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 27/158 (17%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
             + +G+G FG   L          A K +    K        +   E  +   L    N
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGN--KVAVKCI----KNDATAQAFL--AEASVMTQLR-HSN 247

Query: 89  IVELKSA-HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV-LRAIVN-AVNVC-- 143
           +V+L     E++  +++V E    G L D      Y   R  + +    ++  +++VC  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVD------YLRSRGRSVLGGDCLLKFSLDVCEA 301

Query: 144 ----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
                    +HRDL   N   +S  ++ + KV+DFG  
Sbjct: 302 MEYLEGNNFVHRDLAARN-VLVS--EDNVAKVSDFGLT 336

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 22/158 (13%)

Query: 28  SFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
                LG G FGV         +   +  A K + K   +   E      RE+     L 
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLD 79

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
              N++ L         + +V EL   G L D         +     +L  +   AV V 
Sbjct: 80  -HRNLIRLYGVVLTPP-MKMVTELAPLGSLLD------RLRKHQGHFLLGTLSRYAVQVA 131

Query: 144 ------HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                  S   +HRDL   N   ++     L+K+ DFG
Sbjct: 132 EGMGYLESKRFIHRDLAARN-LLLA--TRDLVKIGDFG 166

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 26/168 (15%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           P+E V+ H    R++G+G FGV Y      +    +  A KS+  +          +  R
Sbjct: 17  PHERVVTH--SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFL--R 71

Query: 76  EIQIRRLLSGQPNIVELKSA-HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
           E  + R L+  PN++ L       E   HV++     GDL        +       P ++
Sbjct: 72  EGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDL------LQFIRSPQRNPTVK 124

Query: 135 AIVN-AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
            +++  + V            +HRDL   N C +   ++  +KV DFG
Sbjct: 125 DLISFGLQVARGMEYLAEQKFVHRDLAARN-CMLD--ESFTVKVADFG 169

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 27/177 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
               LG+G FG  ++ T N      A K++ K   M  +    +  +E Q+ + L     
Sbjct: 271 LEVKLGQGCFGEVWMGTWN-GTTRVAIKTL-KPGTM--SPEAFL--QEAQVMKKLR-HEK 323

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVC-- 143
           +V+L +   +E  +++V E    G L D       +   E      L  +V+ A  +   
Sbjct: 324 LVQLYAVVSEE-PIYIVTEYMSKGSLLD-------FLKGETGKYLRLPQLVDMAAQIASG 375

Query: 144 ----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILR 196
                 M  +HRDL+  N   +   +N + KV DFG A L E+    A       ++
Sbjct: 376 MAYVERMNYVHRDLRAAN-ILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 34/154 (22%), Positives = 50/154 (32%), Gaps = 21/154 (13%)

Query: 30  GRMLGRGRFGVTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
            + LG G FG                A K + K      A  D ++  E  + + L   P
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLA-EANVMQQLD-NP 78

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH--- 144
            IV +    E E+   +VME+ + G L        Y  +         I     V     
Sbjct: 79  YIVRMIGICEAES-WMLVMEMAELGPLNK------YLQQNRHVKDKNIIELVHQVSMGMK 131

Query: 145 ---SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                  +HRDL   N   +        K++DFG
Sbjct: 132 YLEESNFVHRDLAARN-VLLV--TQHYAKISDFG 162

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 36/177 (20%), Positives = 55/177 (31%), Gaps = 36/177 (20%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
            + R +G G FG  +                A K + K+      + D    RE  +   
Sbjct: 50  EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML-KEEASADMQADFQ--REAALMAE 106

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPVLRAIV 137
               PNIV+L         + ++ E    GDL +             S  D +   R   
Sbjct: 107 FD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165

Query: 138 N-------------AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                         A  V            +HRDL   N C +   +N ++K+ DFG
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN-CLVG--ENMVVKIADFG 219

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
                 ++ + +++    G +   +  A L K  S L +  + ++ + AD DG G +   
Sbjct: 8   SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDGKGVLSKQ 65

Query: 281 EFTAA 285
           EF  A
Sbjct: 66  EFFVA 70

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 27/177 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
               LG+G FG  ++ T N      A K++ K   M  +    +  +E Q+ + L     
Sbjct: 188 LEVKLGQGCFGEVWMGTWN-GTTRVAIKTL-KPGTM--SPEAFL--QEAQVMKKLR-HEK 240

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVC-- 143
           +V+L +   +E  +++V E    G L D       +   E      L  +V+ A  +   
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLD-------FLKGETGKYLRLPQLVDMAAQIASG 292

Query: 144 ----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILR 196
                 M  +HRDL+  N   +   +N + KV DFG A L E+    A       ++
Sbjct: 293 MAYVERMNYVHRDLRAAN-ILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 27/172 (15%)

Query: 29  FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
             + LG G+FG  ++ T N  +   A K+M K   M  +    +   E  + + L     
Sbjct: 192 LEKKLGAGQFGEVWMATYN-KHTKVAVKTM-KPGSM--SVEAFL--AEANVMKTLQ-HDK 244

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVCH- 144
           +V+L +    E  ++++ E    G L D       +  S+  +   L  +++ +  +   
Sbjct: 245 LVKLHAVVTKE-PIYIITEFMAKGSLLD-------FLKSDEGSKQPLPKLIDFSAQIAEG 296

Query: 145 -----SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
                    +HRDL+  N   +S   + + K+ DFG A + E+    A +  
Sbjct: 297 MAFIEQRNYIHRDLRAAN-ILVS--ASLVCKIADFGLARVIEDNEYTAREGA 345

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 29/158 (18%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
              + +G+G FG   L          A K +    K        +   E  +   L    
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGN--KVAVKCI----KNDATAQAFL--AEASVMTQLR-HS 74

Query: 88  NIVELKSAH-EDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVC 143
           N+V+L     E++  +++V E    G L D       Y  S   +      ++  +++VC
Sbjct: 75  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVD-------YLRSRGRSVLGGDCLLKFSLDVC 127

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                      +HRDL   N   +S  ++ + KV+DFG
Sbjct: 128 EAMEYLEGNNFVHRDLAARN-VLVS--EDNVAKVSDFG 162

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 25/166 (15%)

Query: 29  FGRMLGRGRFGV----TYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
             ++LG G FG      ++    S  +P   K + +    + +   +     +     L 
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI-EDKSGRQSFQAVT--DHMLAIGSLD 73

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
              +IV L       + + +V +    G L D      +  +   A   + ++N  V + 
Sbjct: 74  -HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLD------HVRQHRGALGPQLLLNWGVQIA 125

Query: 144 H------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
                    G++HR+L   N   +     + ++V DFG A L   +
Sbjct: 126 KGMYYLEEHGMVHRNLAARN-VLLK--SPSQVQVADFGVADLLPPD 168

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 47.6 bits (113), Expect = 6e-06
 Identities = 39/163 (23%), Positives = 58/163 (35%), Gaps = 26/163 (15%)

Query: 33  LGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
           LG G FG              +  A K + K+   K    +MM  RE QI   L   P I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-IDVAIKVL-KQGTEKADTEEMM--REAQIMHQLD-NPYI 398

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH---- 144
           V L    + E  + +VME+  GG L        +   +     +  +      V      
Sbjct: 399 VRLIGVCQAEA-LMLVMEMAGGGPLHK------FLVGKREEIPVSNVAELLHQVSMGMKY 451

Query: 145 --SMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEEG 184
                 +HR+L   N   +     A  K++DFG S  L  ++ 
Sbjct: 452 LEEKNFVHRNLAARN-VLLVNRHYA--KISDFGLSKALGADDS 491

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 6e-06
 Identities = 49/382 (12%), Positives = 116/382 (30%), Gaps = 93/382 (24%)

Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
           +P ++V++    G +LG    G T++  +        C S   + KM +           
Sbjct: 148 RPAKNVLID---G-VLG---SGKTWVALD-------VCLSYKVQCKMDF----------- 182

Query: 78  QIRRLLSGQPNI--VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
                      I  + LK+ +  ET + ++ +L          I   + S  D +  ++ 
Sbjct: 183 ----------KIFWLNLKNCNSPETVLEMLQKLL-------YQIDPNWTSRSDHSSNIKL 225

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRD--DNALLKVTDFGSALLFEEEGGEASDDTSV 193
            ++++       +  +  +  N   +  +  +       +    +L        +    V
Sbjct: 226 RIHSIQAELRRLLKSKPYE--NCLLVLLNVQNAKAWNAFNLSCKILL------TTRFKQV 277

Query: 194 ILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV 253
              +           +++      L  +E ++L  K+++        L   E+     + 
Sbjct: 278 TDFLSAATT----THISLDHHSMTLTPDEVKSLLLKYLDCRPQD---LP-REVLTTNPRR 329

Query: 254 GSMLTEFDVKQLMEAADM-DGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
            S++          A  + DG    D  +     +   KL     +  +    +      
Sbjct: 330 LSII----------AESIRDGLATWDNWK----HVNCDKLTTI--IESSLNVLEP----- 368

Query: 313 DEFRAMVESPQTIRNVSHIYTDKAKKFGL--GNTKQFRAMNMLKKLVLQGDIDGNGNIDF 370
            E+R M +        +HI         L   +  +   M ++ KL     ++       
Sbjct: 369 AEYRKMFDRLSVFPPSAHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK--- 422

Query: 371 IEFVNLMTDIYKLETPELLEKA 392
            E    +  IY     +L  + 
Sbjct: 423 -ESTISIPSIYLELKVKLENEY 443

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 44/286 (15%), Positives = 85/286 (29%), Gaps = 94/286 (32%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTK--VGSMLTE----------FD---------V 262
              ++ F++ + D       D  ++ L+K  +  ++            F          V
Sbjct: 23  SVFEDAFVD-NFDCKDVQ--DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV 79

Query: 263 KQLMEAADMDGNGAIDYTEFTAATIQRQKLERS-------EYLSKAF---QYFDKDN--- 309
           ++ +E         I+Y +F  + I+ ++ + S       E   + +   Q F K N   
Sbjct: 80  QKFVEEVL-----RINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133

Query: 310 -SGYDEFRAMVESPQTIRNVS-H-------------IYTDKA--KKFG-------LGNTK 345
              Y + R  +   +  +NV                +        K         L N  
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 346 QFRA-MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQY------LDK 398
                + ML+KL+ Q D +     D    + L     + E   LL+    Y      L  
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK-PYENCLLVLL- 251

Query: 399 NSDQFITVNELET--AFKENNMG-------DDATIKEIISEVGRDH 435
             +    V   +   AF   N+            + + +S     H
Sbjct: 252 --N----VQNAKAWNAF---NLSCKILLTTRFKQVTDFLSAATTTH 288

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEF--DVKQLMEAADMDGNGAIDYTEF 282
                  +S +EL+  +  +G  L +    + +++E  D +G+G + + EF
Sbjct: 17  KEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 21/172 (12%), Positives = 47/172 (27%), Gaps = 24/172 (13%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMA---KKPKMKYAENDMMIRREIQIRRLLS 84
            F   LG+G F   +                    K     +            +   LS
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS 70

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVC 143
              ++V             +V E  + G L        Y  +      +   +  A  + 
Sbjct: 71  -HKHLVLNYGVCVCGDENILVQEFVKFGSLDT------YLKKNKNCINILWKLEVAKQLA 123

Query: 144 H------SMGVMHRDLKPENFCFISRD------DNALLKVTDFGSALLFEEE 183
                     ++H ++  +N   + R+      +   +K++D G ++    +
Sbjct: 124 AAMHFLEENTLIHGNVCAKN-ILLIREEDRKTGNPPFIKLSDPGISITVLPK 174

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 39/161 (24%), Positives = 59/161 (36%), Gaps = 24/161 (14%)

Query: 33  LGRGRFGVTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G FG     +       +  A K + K+   K    +MM  RE QI   L   P IV
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMM--REAQIMHQLD-NPYIV 73

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN-AVNVCH----- 144
            L    + E  + +VME+  GG L        +   +     +  +      V       
Sbjct: 74  RLIGVCQAEA-LMLVMEMAGGGPLHK------FLVGKREEIPVSNVAELLHQVSMGMKYL 126

Query: 145 -SMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEE 183
                +HRDL   N   +   +    K++DFG S  L  ++
Sbjct: 127 EEKNFVHRDLAARN-VLLV--NRHYAKISDFGLSKALGADD 164

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 36/176 (20%)

Query: 29  FGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
            G+ LG G FG     T       +     A K M K+        D++   E  + + +
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK-MLKENASPSELRDLL--SEFNVLKQV 83

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFD-----RIIAKGYYSERDAAPVLRAIVN 138
              P++++L  A   +  + +++E  + G L       R +  GY     +         
Sbjct: 84  -NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 139 -------------AVNVCH------SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                        A  +         M ++HRDL   N   ++  +   +K++DFG
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN-ILVA--EGRKMKISDFG 195

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 27/173 (15%)

Query: 28  SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
                LG G+FG  ++   N  +   A KS+ K+  M  + +  +   E  + + L    
Sbjct: 16  KLVERLGAGQFGEVWMGYYN-GHTKVAVKSL-KQGSM--SPDAFL--AEANLMKQLQ-HQ 68

Query: 88  NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVN-AVNVCH 144
            +V L +    E  ++++ E  + G L D       +  +       +  +++ A  +  
Sbjct: 69  RLVRLYAVVTQE-PIYIITEYMENGSLVD-------FLKTPSGIKLTINKLLDMAAQIAE 120

Query: 145 ------SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
                     +HRDL+  N   +S  D    K+ DFG A L E+    A +  
Sbjct: 121 GMAFIEERNYIHRDLRAAN-ILVS--DTLSCKIADFGLARLIEDNEYTAREGA 170

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 28  SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
             G+ LGRG FG           + +T    A K +  K    ++E+  ++  E++I   
Sbjct: 25  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALM-SELKILIH 81

Query: 83  LSGQPNIVELKSAHEDETA-VHVVMELCQGGDLFD 116
           +    N+V L  A       + V++E C+ G+L  
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +  E+       F  +    NG LS D+++  L    S L    + ++ E +D+D +G 
Sbjct: 8   AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGM 64

Query: 277 IDYTEF 282
           +D  EF
Sbjct: 65  LDRDEF 70

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 37/204 (18%), Positives = 61/204 (29%), Gaps = 47/204 (23%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA----KKPKMKYAENDMMIRREIQIRRL 82
                 +G G FG  +    + T  P A K +A          + +    I  EI I + 
Sbjct: 22  LQRCEKIGEGVFGEVFQTIADHT--PVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKE 79

Query: 83  LSGQ--------PNIVELKSAH------------------------------EDETAVHV 104
           LS             + L S H                                +  + +
Sbjct: 80  LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFI 139

Query: 105 VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPENFCFISR 163
           V+E   GG   +++  K   S   A  +L  +  ++ V   S+   HRDL   N   + +
Sbjct: 140 VLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL-LKK 197

Query: 164 DDNALLKVTDFGSALLFEEEGGEA 187
                L  T  G +      G + 
Sbjct: 198 TSLKKLHYTLNGKSSTIPSCGLQV 221

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 42.6 bits (99), Expect = 2e-04
 Identities = 13/100 (13%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           +     + D +K+  +++ EL+  L ++   + +   +++    D     +++  E    
Sbjct: 13  IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEI--E 70

Query: 286 TIQRQKLERSEYLSKAFQYFDKDNSGY--DEFRAMVESPQ 323
           T  +   +R+E + +AF+           +     ++  Q
Sbjct: 71  TFYKMLTQRAE-IDRAFEEAAGSAETLSVERLVTFLQHQQ 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	436
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.98
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.98
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.98
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.98
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.98
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.98
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.98
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.98
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.98
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.98
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.98
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.98
3uqc_A	286	Probable conserved transmembrane protein; structur	99.98
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.98
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.98
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.98
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.98
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.98
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.93
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.93
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.92
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.91
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.91
1y1x_A	191	Leishmania major homolog of programmed cell death	99.91
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.9
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.9
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.89
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.89
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.89
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.89
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.88
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.88
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.88
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.88
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.87
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.87
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.86
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.85
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.85
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.85
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.85
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.85
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.84
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.84
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.84
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.84
3fwb_A	161	Cell division control protein 31; gene gating, com	99.84
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.84
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.84
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.84
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.84
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.84
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.83
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.83
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.83
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.83
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.83
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.82
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.82
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.82
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.82
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.81
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.81
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.81
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.81
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.81
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.81
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.81
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.81
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.8
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.8
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.8
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.8
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.8
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.79
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.79
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.79
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.79
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.79
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.79
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.79
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.79
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.79
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.79
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.79
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.78
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.78
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.78
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.78
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.78
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.78
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.77
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.77
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.77
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.77
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.77
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.77
3fwb_A	161	Cell division control protein 31; gene gating, com	99.77
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.76
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.76
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.76
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.76
1y1x_A	191	Leishmania major homolog of programmed cell death	99.76
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.76
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.76
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.76
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.76
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.76
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.76
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.76
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.76
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.75
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.75
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.75
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.75
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.75
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.75
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.75
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.75
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.75
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.75
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.75
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.75
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.75
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.75
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.74
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.74
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.74
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.74
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.74
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.74
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.74
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.74
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.74
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.74
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.73
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.73
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.73
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.73
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.73
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.73
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.73
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.73
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.73
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.73
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.72
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.72
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.72
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.72
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.72
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.72
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.72
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.71
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.71
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.71
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.71
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.71
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.71
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.7
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.7
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.7
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.7
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.7
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.7
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.7
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.69
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.69
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.69
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.69
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.68
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.68
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.67
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.67
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.67
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.66
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.66
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.64
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.64
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.64
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.64
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.63
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.63
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.62
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.61
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.61
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.61
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.59
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.58
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.58
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.58
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.57
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.56
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.55
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.53
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.53
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.51
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.5
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.49
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.49
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.49
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.48
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.47
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.47
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.47
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.47
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.46
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.46
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.45
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.45
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.41
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.38
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.36
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.33
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.32
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.32
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.31
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.31
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.3
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.27
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.26
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.21
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.21
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.2
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.2
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.19
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.19
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.17
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.16
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.16
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.15
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.14
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.14
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.12
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.11
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.11
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.09
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.09
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.09
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.07
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.07
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.07
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.06
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.04
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	99.04
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.03
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.02
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.02
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.02
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.02
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.01
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.01
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.0
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	98.99
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	98.99
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.98
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.97
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.97
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.96
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	98.96
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.96
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.95
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.95
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	98.95
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.94

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=6.5e-55  Score=437.98  Aligned_cols=399  Identities=23%  Similarity=0.372  Sum_probs=280.0

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ......+.++|++++.||+|+||.||+|++..++..||+|++.+.....  .....+.+|+.+++.+ +||||+++++++
T Consensus        29 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~~~~~~  105 (494)
T 3lij_A           29 TSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--SSNSKLLEEVAVLKLL-DHPNIMKLYDFF  105 (494)
T ss_dssp             CCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             ecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--hHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            3455667889999999999999999999999999999999997654322  2245688999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .....+|+|||||++|+|.+++....++++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||+
T Consensus       106 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~  185 (494)
T 3lij_A          106 EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL  185 (494)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence            99999999999999999999999888899999999999999999999999999999999999996544566799999999


Q ss_pred             cccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----C---hhhHHHHHHHhhh---hCCCCCC
Q 042392          177 ALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----P---GEETQALKEKFIE---MDTDKNG  239 (436)
Q Consensus       177 a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~---~e~~~~l~~~F~~---~D~~~~g  239 (436)
                      |........       ....|||++.+  .|+.++|+||+|++++ +.+    +   ......+..+-..   ++.+.-.
T Consensus       186 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  262 (494)
T 3lij_A          186 SAVFENQKKMKERLGTAYYIAPEVLRK--KYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK  262 (494)
T ss_dssp             CEECBTTBCBCCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGT
T ss_pred             CeECCCCccccccCCCcCeeCHHHHcc--cCCCchhHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcc
Confidence            987654322       12238998753  6899999999965543 322    1   1111111111110   0000000


Q ss_pred             ccCHHHHHHHHHhc-----CCCCCHHHHHH--HHHHHc---------------------CCCCCcccHHHHHHHHHhh-h
Q 042392          240 TLSYDELRAGLTKV-----GSMLTEFDVKQ--LMEAAD---------------------MDGNGAIDYTEFTAATIQR-Q  290 (436)
Q Consensus       240 ~i~~~eL~~~l~~~-----~~~~s~~~i~~--l~~~~d---------------------~d~~g~i~~~EF~~~~~~~-~  290 (436)
                      .+ ..++...+..+     ...++.+++-.  .|+...                     ......+.-. .+..+... .
T Consensus       263 ~~-s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa-~l~~ia~~~~  340 (494)
T 3lij_A          263 NV-SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQA-ALLYMASKLT  340 (494)
T ss_dssp             TS-CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHH-HHHHHHHHSC
T ss_pred             cC-CHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHH-HHHHHHHhcc
Confidence            01 11222222221     12333333210  111100                     0000011100 11111111 2


Q ss_pred             hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          291 KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       291 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ......+++++|+.||+|+||.|+.+||..++..+-.           ......+..+++.++.++|+.+|.|++|.|+|
T Consensus       341 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~  409 (494)
T 3lij_A          341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSG-----------EEVAVFDLPQIESEVDAILGAADFDRNGYIDY  409 (494)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHS-----------SCCCCC--CHHHHHHHHHHHHHCTTCSSSEEH
T ss_pred             cHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcc-----------cccccccccccHHHHHHHHHHhCCCCCCcCcH
Confidence            3455678999999999999999999999876444300           00111233556778999999999999999999


Q ss_pred             HHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++.........++++.+|+.||+|+||+|+.+||+.+|..  .. +++++++||+++|.|+|
T Consensus       410 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~d  474 (494)
T 3lij_A          410 SEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNND  474 (494)
T ss_dssp             HHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSS
T ss_pred             HHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCC
Confidence            999998876655566788999999999999999999999999975  34 88999999999999886

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.2e-54  Score=435.11  Aligned_cols=403  Identities=23%  Similarity=0.343  Sum_probs=294.5

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch---------hhHHHHHHHHHHHHHhcCCCCC
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY---------AENDMMIRREIQIRRLLSGQPN   88 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~~h~n   88 (436)
                      .....+.++|++++.||+|+||.||+|++..+++.||||++........         ......+.+|+.+++.+ +|||
T Consensus        29 ~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn  107 (504)
T 3q5i_A           29 KKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPN  107 (504)
T ss_dssp             EECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTT
T ss_pred             ccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCC
Confidence            3456688999999999999999999999999999999999976543210         12346788999999999 6999


Q ss_pred             eeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392           89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus        89 iv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                      |+++++++.....+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+....
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSS
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCcc
Confidence            99999999999999999999999999999998888999999999999999999999999999999999999954333347


Q ss_pred             EEEEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----C---hhhH-----------
Q 042392          169 LKVTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----P---GEET-----------  223 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~---~e~~-----------  223 (436)
                      +||+|||+|........       ....|||++.+  .|+.++|+||+|+.++ +.+    +   ....           
T Consensus       188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~i~~~~~  264 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK--KYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEKGKY  264 (504)
T ss_dssp             EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc--CCCchHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999999987654321       12238998764  6889999999966543 222    1   0000           


Q ss_pred             -----------HHHHHHh-hhhCCCCCCccCHHHHHH--HHHhcCCCCC---HHHHHHHHHHH-cCCCCCcccHHHHHHH
Q 042392          224 -----------QALKEKF-IEMDTDKNGTLSYDELRA--GLTKVGSMLT---EFDVKQLMEAA-DMDGNGAIDYTEFTAA  285 (436)
Q Consensus       224 -----------~~l~~~F-~~~D~~~~g~i~~~eL~~--~l~~~~~~~s---~~~i~~l~~~~-d~d~~g~i~~~EF~~~  285 (436)
                                 ..+..+. .++..++..+++..++..  |++.......   ...+...+..+ ...+..++.-..+...
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i  344 (504)
T 3q5i_A          265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFI  344 (504)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred             CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                       1111111 234556666667666653  4554433222   11222222222 1222222222222222


Q ss_pred             HHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCC
Q 042392          286 TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGN  365 (436)
Q Consensus       286 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  365 (436)
                      .......+...+++++|+.+|+|+||.|+.+||..++..+...           +....+..+++.++.++++.+|.|++
T Consensus       345 ~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~D~d~d  413 (504)
T 3q5i_A          345 GSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNF-----------KNELGELKNVEEEVDNILKEVDFDKN  413 (504)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHH-----------C--CCSCCCHHHHHHHHHHHHCTTCS
T ss_pred             hccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhc-----------ccccccccccHHHHHHHHHHhCCCCC
Confidence            2222244566789999999999999999999997664443111           01111234566789999999999999


Q ss_pred             CcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          366 GNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       366 g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      |.|+|+||+.++.........+.++.+|+.||+|+||+||.+||+.++...+ .+++++++|++++|.|+|
T Consensus       414 G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~-~~~~~~~~~~~~~D~d~d  483 (504)
T 3q5i_A          414 GYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS-ISEKTWNDVLGEADQNKD  483 (504)
T ss_dssp             SSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC-CCHHHHHHHHHTTCSSCS
T ss_pred             CcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC-CCHHHHHHHHHHhCCCCC
Confidence            9999999999887665556678899999999999999999999999997632 289999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.6e-55  Score=441.67  Aligned_cols=399  Identities=24%  Similarity=0.365  Sum_probs=272.9

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|++..+++.||||++.+.....  .....+.+|+.+++.+ +||||+++++++..
T Consensus        16 ~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~   92 (486)
T 3mwu_A           16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKL-DHPNIMKLFEILED   92 (486)
T ss_dssp             TCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             ccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHHHHHHHHHHHHhC-CCCCcCeEEEEEEc
Confidence            34568899999999999999999999999999999999986543221  2346788999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...+|+|||||++|+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            99999999999999999999988899999999999999999999999999999999999999655566789999999998


Q ss_pred             cccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----C---hhhHHHHHHH---------------
Q 042392          179 LFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----P---GEETQALKEK---------------  229 (436)
Q Consensus       179 ~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~---~e~~~~l~~~---------------  229 (436)
                      ........       ...|||++.+  .|+.++|+||+|++++ +.+    +   ......+..+               
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHH-HHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGS
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCC
Confidence            76543221       1228998865  5889999999966543 222    1   1111111111               


Q ss_pred             --------hhhhCCCCCCccCHHHHHH--HHHhcCCCC-C---HHHHHHHHH---HHcCCCCCcccHHHHHHHHHhh-hh
Q 042392          230 --------FIEMDTDKNGTLSYDELRA--GLTKVGSML-T---EFDVKQLME---AADMDGNGAIDYTEFTAATIQR-QK  291 (436)
Q Consensus       230 --------F~~~D~~~~g~i~~~eL~~--~l~~~~~~~-s---~~~i~~l~~---~~d~d~~g~i~~~EF~~~~~~~-~~  291 (436)
                              -.++..++..+++..++..  |++...... +   ...+...+.   .+..  ..++.-.. +..+... ..
T Consensus       250 s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-l~~ia~~l~~  326 (486)
T 3mwu_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQA--EKKLAQAA-LLYMASKLTT  326 (486)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHH--SCHHHHHH-HHHHHHHHCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHH--HHHHHHHH-HHHHHHHhcc
Confidence                    1123334444444444432  333322110 0   001111111   1100  00010000 1111111 13


Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCch-----hhhhHHHHHHHHHccccCCCC
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTK-----QFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      .....+++++|+.+|+|+||.|+.+||..++..+          ++..|.....     ...+++++.++|+.+|.|++|
T Consensus       327 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG  396 (486)
T 3mwu_A          327 LDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEF----------MRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSG  396 (486)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----------HHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHh----------hhhhcccchhcccccchhhHHHHHHHHHHhcCCCCC
Confidence            3456789999999999999999999996553322          2222333220     123467899999999999999


Q ss_pred             cccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          367 NIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       367 ~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      .|+|+||+.++.........+.++.+|+.||+|+||+||.+||+.++..+|.. ++++++++++++|.|+|
T Consensus       397 ~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~d  467 (486)
T 3mwu_A          397 SIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKD  467 (486)
T ss_dssp             SBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCS
T ss_pred             cCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCC
Confidence            99999999988766666677889999999999999999999999999999887 89999999999999886

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=8.8e-55  Score=436.25  Aligned_cols=403  Identities=24%  Similarity=0.376  Sum_probs=288.1

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ......+.++|++.+.||+|+||.||+|++..+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++
T Consensus        18 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~   95 (484)
T 3nyv_A           18 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQL-DHPNIMKLYEFF   95 (484)
T ss_dssp             -CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             ccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHHHHHHHHHHHhC-CCCCCCcEEEEE
Confidence            3455678889999999999999999999999999999999997654332 23456789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ...+.+|+|||||.+|+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  175 (484)
T 3nyv_A           96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL  175 (484)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence            99999999999999999999999888899999999999999999999999999999999999996555678999999999


Q ss_pred             cccccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----C---hhhHHHHHHHhhh---hCCCCCC
Q 042392          177 ALLFEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----P---GEETQALKEKFIE---MDTDKNG  239 (436)
Q Consensus       177 a~~~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~---~e~~~~l~~~F~~---~D~~~~g  239 (436)
                      |.......       .....|||++.+  .|+.++|+||+|+.++ +.+    +   ......+..+-..   +..+...
T Consensus       176 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  252 (484)
T 3nyv_A          176 STHFEASKKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK  252 (484)
T ss_dssp             HHHBCCCCSHHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGG
T ss_pred             eEEcccccccccCCCCccccCceeecC--CCCCcceeHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccc
Confidence            98765432       222349998876  6889999999965543 322    1   1111112211110   0000000


Q ss_pred             ccCHHHHHHHHHhc-----CCCCCHHHHH--HHHHHHcCCC---CCc------ccHHHHHH----------HHHhh-hhh
Q 042392          240 TLSYDELRAGLTKV-----GSMLTEFDVK--QLMEAADMDG---NGA------IDYTEFTA----------ATIQR-QKL  292 (436)
Q Consensus       240 ~i~~~eL~~~l~~~-----~~~~s~~~i~--~l~~~~d~d~---~g~------i~~~EF~~----------~~~~~-~~~  292 (436)
                      .+ ..++...+..+     ..+++..++-  ..++......   +..      .....|..          .+... ...
T Consensus       253 ~~-s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~  331 (484)
T 3nyv_A          253 KV-SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQ  331 (484)
T ss_dssp             GS-CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC-CHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcH
Confidence            11 12233333331     1234444431  1333221100   000      00111110          11111 234


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCc--hhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT--KQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.++++|+.+|+|+||.|+.+||..++..+          ++..|...+  .....+.++.++|+.+|.|++|.|+|
T Consensus       332 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~  401 (484)
T 3nyv_A          332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKEL----------MRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEY  401 (484)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH----------HC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEH
T ss_pred             HHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHH----------hhhcccccccccccccHHHHHHHHHHhCCCCCCeEeH
Confidence            456789999999999999999999996542222          222333222  12334678999999999999999999


Q ss_pred             HHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++.........++++.+|+.||+|+||+||.+||+.+|...+ .++++++++++++|.|+|
T Consensus       402 ~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-~~~~~~~~~~~~~D~d~d  466 (484)
T 3nyv_A          402 SEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-VDSETWKSVLSEVDKNND  466 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCC
T ss_pred             HHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCC
Confidence            99999887664444557899999999999999999999999998722 289999999999999986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.2e-46  Score=350.09  Aligned_cols=242  Identities=23%  Similarity=0.339  Sum_probs=187.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|+++++||+|+||+||+|+++.+|+.||||++.+..... ......+.+|+.+|+.| +|||||+++++|++.+
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCC
Confidence            334578999999999999999999999999999999997653322 23456789999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVL  182 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceec
Confidence            999999999999999999999999999999999999999999999999999999999999   78899999999999987


Q ss_pred             cccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          181 EEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       181 ~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ......          ...|||++.+ +.|+.++|+||+|+.+ .+++...      ..|       .+ -+..++...+
T Consensus       183 ~~~~~~~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvil-yeml~G~------~PF-------~~-~~~~~~~~~i  246 (311)
T 4aw0_A          183 SPESKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCII-YQLVAGL------PPF-------RA-GNEGLIFAKI  246 (311)
T ss_dssp             CTTTTCCCBCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHH-HHHHHSS------CSS-------CC-SSHHHHHHHH
T ss_pred             CCCCCcccccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHH-HHHHhCC------CCC-------CC-CCHHHHHHHH
Confidence            543211          1129999887 5789999999995544 3333100      000       01 1222222222


Q ss_pred             Hh----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHH
Q 042392          251 TK----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFT  283 (436)
Q Consensus       251 ~~----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~  283 (436)
                      ..    +...++.+-.+.+-+.+..|+..|++.+|.+
T Consensus       247 ~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            21    2234455444555566778888888887753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2e-45  Score=337.20  Aligned_cols=242  Identities=25%  Similarity=0.340  Sum_probs=179.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..++|++.+.||+|+||.||+|+++.+|+.||||++.+..... ......+.+|+.+|+.+ +|||||++++++.+++.+
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            3478999999999999999999999999999999998765433 34456789999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||| +|+|.+++.+.+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC-----
T ss_pred             EEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCC
Confidence            9999999 57999999999999999999999999999999999999999999999999   7788999999999987654


Q ss_pred             cCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh---
Q 042392          183 EGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK---  252 (436)
Q Consensus       183 ~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~---  252 (436)
                      ...       ....|||++.+..+++.++|+||+|++++ ++++..      ..|       .+ -+..++...+..   
T Consensus       165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily-~lltg~------~PF-------~~-~~~~~~~~~i~~~~~  229 (275)
T 3hyh_A          165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR------LPF-------DD-ESIPVLFKNISNGVY  229 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHH-HHHHSS------CSS-------CC-SSHHHHHHHHHHTCC
T ss_pred             CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHH-HHHHCC------CCC-------CC-CCHHHHHHHHHcCCC
Confidence            322       12239999987655678999999965543 332100      000       01 122222222222   


Q ss_pred             -cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 -VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 -~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       +...++.+-.+.+-+.+..|++.|++..|.+.+
T Consensus       230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence             223455555566666788999999999998764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5e-45  Score=344.72  Aligned_cols=240  Identities=20%  Similarity=0.292  Sum_probs=183.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++++.||+|+||.||+|+++.+|+.||||++.+....  ......+.+|+.+|+.| +|||||+++++|.+.+.+|
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANM-KHPNIVQYRESFEENGSLY   99 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEE
Confidence            57999999999999999999999999999999999876543  23456789999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      ||||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+.
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCC
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeec
Confidence            9999999999999998653  47999999999999999999999999999999999999   788999999999999775


Q ss_pred             cc--------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH-HHHHh
Q 042392          182 EE--------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR-AGLTK  252 (436)
Q Consensus       182 ~~--------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~-~~l~~  252 (436)
                      ..        +.....|||++.+ ..|+.++||||+|+++ .++++..             .+-.| -+..++. ..+..
T Consensus       177 ~~~~~~~~~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvil-yemltG~-------------~PF~~-~~~~~~~~~i~~~  240 (350)
T 4b9d_A          177 STVELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVL-YELCTLK-------------HAFEA-GSMKNLVLKIISG  240 (350)
T ss_dssp             HHHHHHHHHHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHH-HHHHHSS-------------CSCCC-SSHHHHHHHHHHT
T ss_pred             CCcccccccCCCccccCHHHHCC-CCCCcHHHHHHHHHHH-HHHHHCC-------------CCCCC-cCHHHHHHHHHcC
Confidence            42        2334449999876 5789999999995544 3433100             00011 1122222 22221


Q ss_pred             ----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 ----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          ....++.+-.+.+-+.+..|++.|++..|.+.+
T Consensus       241 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          241 SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                122345554555666788899999999998764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.5e-44  Score=340.87  Aligned_cols=238  Identities=21%  Similarity=0.228  Sum_probs=183.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..+.|++.+.||+|+||.||+|+++.+|+.||||++......    ....+.+|+.+|+.| +|||||+++++|.+.+.+
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~  146 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDEL  146 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence            456799999999999999999999999999999999765332    234578999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||||||+||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+..
T Consensus       147 ~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          147 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             EEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred             EEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCC
Confidence            999999999999998875 569999999999999999999999999999999999999   7889999999999998754


Q ss_pred             cCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH-hc
Q 042392          183 EGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT-KV  253 (436)
Q Consensus       183 ~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~-~~  253 (436)
                      .....        ..|||++.+ ..|+.++||||+|+++ .+++...      ..|       .+. +..++...+. ..
T Consensus       223 ~~~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvil-yeml~G~------~PF-------~~~-~~~~~~~~i~~~~  286 (346)
T 4fih_A          223 EVPRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMV-IEMVDGE------PPY-------FNE-PPLKAMKMIRDNL  286 (346)
T ss_dssp             SSCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS------CTT-------TTS-CHHHHHHHHHHSS
T ss_pred             CCCcccccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHH-HHHHHCC------CCC-------CCc-CHHHHHHHHHcCC
Confidence            32211        129998865 5789999999995544 3433100      000       011 1111111111 11


Q ss_pred             C------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 G------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .      ..++.+-.+.+-+.+..|++.|++..|.+.+
T Consensus       287 ~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          287 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1      1234444455556778899999999887754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=342.68  Aligned_cols=239  Identities=21%  Similarity=0.226  Sum_probs=185.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .....|++++.||+|+||.||+|+++.+|+.||||++.......    ...+.+|+.+|+.| +|||||+++++|.+.+.
T Consensus       148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~  222 (423)
T 4fie_A          148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----RELLFNEVVIMRDY-QHENVVEMYNSYLVGDE  222 (423)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS----GGGHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH----HHHHHHHHHHHHhC-CCCCCCceEEEEEECCE
Confidence            45578999999999999999999999999999999997654322    34578999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|||||||+||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+.
T Consensus       223 ~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~  298 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVS  298 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECC
Confidence            9999999999999998865 569999999999999999999999999999999999999   788999999999999875


Q ss_pred             ccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-
Q 042392          182 EEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-  252 (436)
Q Consensus       182 ~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-  252 (436)
                      .....        ...|||++.+ ..|+.++||||+|+++ .+++...      ..|       .+ -+..++...+.. 
T Consensus       299 ~~~~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvil-yeml~G~------~PF-------~~-~~~~~~~~~i~~~  362 (423)
T 4fie_A          299 KEVPRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMV-IEMVDGE------PPY-------FN-EPPLKAMKMIRDN  362 (423)
T ss_dssp             SSCCCBCCCEECTTTCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS------CTT-------TT-SCHHHHHHHHHHS
T ss_pred             CCCccccccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHH-HHHHHCC------CCC-------CC-cCHHHHHHHHHcC
Confidence            43221        2239998866 5789999999995544 4433100      000       01 111111111111 


Q ss_pred             c------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 V------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ~------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .      ...++.+-.+.+-+++..|.+.|++..|.+.+
T Consensus       363 ~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             CCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1      12345555555666778899999999887754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.5e-44  Score=335.61  Aligned_cols=238  Identities=20%  Similarity=0.257  Sum_probs=183.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ...|++.+.||+|+||.||+|+++.+|+.||||++.....         ..+|+.+|+.| +|||||++++++.+.+.+|
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~  126 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGL-SSPRIVPLYGAVREGPWVN  126 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence            4568999999999999999999999999999999976532         24799999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC-cEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~-~~kl~DFG~a~~~~~  182 (436)
                      ||||||+||+|.+++.+.+++++..++.++.||+.||.|||++||+||||||+|||+   +.++ .+||+|||+|+.+..
T Consensus       127 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC--
T ss_pred             EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccC
Confidence            999999999999999999999999999999999999999999999999999999999   5665 699999999997754


Q ss_pred             cCC-------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          183 EGG-------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       183 ~~~-------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ...             ....|||++.+ ..|+.++|+||+|++ +.++++..      ..|.   ......+ ...+...
T Consensus       204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvi-lyemltG~------~Pf~---~~~~~~~-~~~i~~~  271 (336)
T 4g3f_A          204 DGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCM-MLHMLNGC------HPWT---QYFRGPL-CLKIASE  271 (336)
T ss_dssp             ----------CCCCCCGGGCCHHHHTT-CCCCTHHHHHHHHHH-HHHHHHSS------CSST---TTCCSCC-HHHHHHS
T ss_pred             CCcccceecCCccccCccccCHHHHCC-CCCCcHHHHHHHHHH-HHHHHHCc------CCCC---CCCHHHH-HHHHHcC
Confidence            321             11229999887 578999999999554 44433110      0111   1111111 1111110


Q ss_pred             ---HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          250 ---LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       250 ---l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                         +..+...++..-.+.+-+.+..|++.|++..|.+..+
T Consensus       272 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l  311 (336)
T 4g3f_A          272 PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKV  311 (336)
T ss_dssp             CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence               1123345565556667777889999999999988654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.5e-43  Score=327.50  Aligned_cols=242  Identities=15%  Similarity=0.184  Sum_probs=181.5

Q ss_pred             cccce-eeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           23 VMLHY-SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        23 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ...+| ++.+.||+|+||.||+|+++.+++.||+|++......  ......+.+|+.+|+.| +|||||+++++|.+   
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~   99 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEET
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccC
Confidence            34455 7888999999999999999999999999999765433  23456789999999999 69999999999865   


Q ss_pred             -CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEEEecC
Q 042392           99 -ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        99 -~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                       +..+|||||||+||+|.+++.+.+++++..++.++.||+.||.|||+++  |+||||||+|||+.  +.++.+||+|||
T Consensus       100 ~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFG  177 (290)
T 3fpq_A          100 GKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLG  177 (290)
T ss_dssp             TEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTT
T ss_pred             CCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCc
Confidence             3568999999999999999999899999999999999999999999998  99999999999993  246899999999


Q ss_pred             CcccccccC------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          176 SALLFEEEG------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       176 ~a~~~~~~~------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      +|+......      .....|||++.+  .|+.++||||+|+++ .+.++..             .+-.+.-+..++...
T Consensus       178 la~~~~~~~~~~~~GTp~YmAPE~~~~--~y~~~~DiwSlGvil-yelltg~-------------~Pf~~~~~~~~~~~~  241 (290)
T 3fpq_A          178 LATLKRASFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCM-LEMATSE-------------YPYSECQNAAQIYRR  241 (290)
T ss_dssp             GGGGCCTTSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHH-HHHHHSS-------------CTTTTCSSHHHHHHH
T ss_pred             CCEeCCCCccCCcccCccccCHHHcCC--CCCcHHHHHHHHHHH-HHHHHCC-------------CCCCCCCcHHHHHHH
Confidence            998654322      222339998764  699999999996554 3332100             000111122222222


Q ss_pred             HHh------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          250 LTK------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       250 l~~------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +..      +....+.+-.+.+-+++..|++.|+++.|.+.+
T Consensus       242 i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          242 VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            221      111223333344555678888999999887753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.8e-44  Score=335.44  Aligned_cols=183  Identities=26%  Similarity=0.416  Sum_probs=151.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .++|++++.||+|+||+||+|++.   .+++.||||++.+.....  .....+.+|+.+|+.+ +|||||++++++.+++
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEV-NHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCC-CCTTEECEEEEEEETT
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECC
Confidence            368999999999999999999984   468899999997654332  1223578899999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++.+.+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC-
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceec
Confidence            999999999999999999999999999999999999999999999999999999999999   78899999999999875


Q ss_pred             cccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......        ..|||++.+ ..|+.++|+||+|+++
T Consensus       177 ~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvil  216 (304)
T 3ubd_A          177 IDHEKKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLM  216 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHHT-SCCCTHHHHHHHHHHH
T ss_pred             cCCCccccccccCcccCCHHHhcc-CCCCCCCcccchHHHH
Confidence            4432211        129999876 5789999999995544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=7.3e-43  Score=325.24  Aligned_cols=242  Identities=18%  Similarity=0.179  Sum_probs=185.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...++|.+.+.||+|+||.||+|++.     .++..||||++....    ......+.+|+.+|+.| +|||||++++++
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l-~HpnIV~l~g~~   84 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNL-QHEHIVKFYGVC   84 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC----hHHHHHHHHHHHHHHhC-CCCCCccEEEEE
Confidence            34568999999999999999999875     357899999997543    34456789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKG-------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR  163 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~  163 (436)
                      .+++.+|+|||||++|+|.+++.+.+             .+++..+..++.||+.||.|||+++|+||||||+|||+   
T Consensus        85 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---  161 (299)
T 4asz_A           85 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---  161 (299)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---
Confidence            99999999999999999999998642             58999999999999999999999999999999999999   


Q ss_pred             CCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhh
Q 042392          164 DDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEM  233 (436)
Q Consensus       164 ~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~  233 (436)
                      +.++.+||+|||+|+.......          ....|||++.+ ..|+.++|+||+|+.+ .+.++.             
T Consensus       162 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl-~Ellt~-------------  226 (299)
T 4asz_A          162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVL-WEIFTY-------------  226 (299)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHHTT-------------
T ss_pred             CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHH-HHHHcC-------------
Confidence            7788999999999987644321          11238998876 5799999999995544 333210             


Q ss_pred             CCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          234 DTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       234 D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ...+-...+..++...+..-     ....+.+-.+.+.+++..|++.|+++.|....+
T Consensus       227 G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L  284 (299)
T 4asz_A          227 GKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL  284 (299)
T ss_dssp             TCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            11111123444554444331     123344445556667788999999999986554

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-43  Score=338.03  Aligned_cols=255  Identities=20%  Similarity=0.246  Sum_probs=198.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----   98 (436)
                      +.++|++++.||+|+||.||+|+++.+|+.||||++.+....  ......+.+|+.+|+.| +|||||++++++..    
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV--VTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCT
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc--hHHHHHHHHHHHHHHhc-CCCCcceEeeeeeccccc
Confidence            456899999999999999999999999999999999765433  24456788999999999 69999999998754    


Q ss_pred             --CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 --ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 --~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                        .+.+|||||||+ |+|.+++.+.+++++..++.+++||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGl  204 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGM  204 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecce
Confidence              367999999996 5899999988899999999999999999999999999999999999999   7889999999999


Q ss_pred             cccccccC------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCC
Q 042392          177 ALLFEEEG------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       177 a~~~~~~~------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~  237 (436)
                      |+.+....            .....|||++.+..+|+.++|+||+| |++++++       +......+..++.....++
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG-~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~  283 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG-CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS  283 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH-HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhH-HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            98764321            11223999999877889999999994 5544443       3456677777776665544


Q ss_pred             CCc---cCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          238 NGT---LSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       238 ~g~---i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...   +....+...+..+.           ...+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            322   12222333333222           2345666677777888899999998887654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.6e-42  Score=327.51  Aligned_cols=257  Identities=17%  Similarity=0.206  Sum_probs=194.9

Q ss_pred             ccccccccccccccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC
Q 042392           12 RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ   86 (436)
Q Consensus        12 ~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h   86 (436)
                      +.|.-.+.|+...++|++++.||+|+||.||+|++..+     ++.||||++.....   ......+.+|+.+|+.+.+|
T Consensus        51 ~lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---~~~~~~~~~E~~il~~l~hh  127 (353)
T 4ase_A           51 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHH  127 (353)
T ss_dssp             GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---hHHHHHHHHHHHHHHHcCCC
Confidence            34544556888899999999999999999999998654     36799999875543   23456789999999999656


Q ss_pred             CCeeeceeeeec-CCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcc
Q 042392           87 PNIVELKSAHED-ETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVM  149 (436)
Q Consensus        87 ~niv~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~  149 (436)
                      ||||++++++.. .+.+|||||||++|+|.++|.+.                ..+++..+..++.||+.||.|||+++||
T Consensus       128 pnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~ii  207 (353)
T 4ase_A          128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI  207 (353)
T ss_dssp             TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCee
Confidence            999999999865 46799999999999999999863                2378999999999999999999999999


Q ss_pred             cccCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC
Q 042392          150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP  219 (436)
Q Consensus       150 Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~  219 (436)
                      ||||||+|||+   +.++.+||+|||+|+.+......          ...|||++.+ ..|+.++|+||+|+ ++.+.++
T Consensus       208 HRDLK~~NILl---~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv-~l~El~t  282 (353)
T 4ase_A          208 HRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGV-LLWEIFS  282 (353)
T ss_dssp             CSCCSGGGEEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHH-HHHHHTT
T ss_pred             cCccCccceee---CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc-CCCCCcccEeehHH-HHHHHHh
Confidence            99999999999   77889999999999876443211          1239999986 57999999999954 4444432


Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .            -..+-.|.-..+++...+..     .....+.+-.+.+.+++..|++.|+++.|.+..+..
T Consensus       283 ~------------G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          283 L------------GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             T------------SCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C------------CCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            1            00111222222344444433     122334455566667788899999999999887643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.9e-42  Score=321.67  Aligned_cols=183  Identities=24%  Similarity=0.373  Sum_probs=149.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC---
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET---  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---  100 (436)
                      ..+|++++.||+|+||.||+|+++.+|+.||||++.....   ......+.+|+.+|+.| +|||||+++++|...+   
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC---
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccc
Confidence            4679999999999999999999999999999999976542   33456789999999999 6999999999987543   


Q ss_pred             ---------eEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392          101 ---------AVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus       101 ---------~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                               .+|+|||||+||+|.+++...+.   .++..++.++.||+.||.|||++||+||||||+|||+   +.++.
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~  156 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDV  156 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCC
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCc
Confidence                     47999999999999999987655   3456688999999999999999999999999999999   77889


Q ss_pred             EEEEecCCcccccccC--------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          169 LKVTDFGSALLFEEEG--------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~--------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +||+|||+|+.+....                    .....|||++.+ ..|+.++|+||+|++++
T Consensus       157 vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvily  221 (299)
T 4g31_A          157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILF  221 (299)
T ss_dssp             EEECCCCCC--------------------------CCCTTSCHHHHTT-CCCCTHHHHHHHHHHHH
T ss_pred             EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC-CCCCCHHHHHHHHHHHH
Confidence            9999999998765421                    122339999876 57899999999955543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=320.94  Aligned_cols=242  Identities=17%  Similarity=0.161  Sum_probs=179.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      -..+|.+.+.||+|+||.||+|++.     .+++.||||++....    ......+.+|+.+|+.| +|||||++++++.
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~  113 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTML-QHQHIVRFFGVCT  113 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC----HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence            4567999999999999999999875     368899999997543    34456799999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK---------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS  162 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~  162 (436)
                      +.+.+|||||||++|+|.+++...               +++++..+..++.||+.||.|||+++|+||||||+|||+  
T Consensus       114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl--  191 (329)
T 4aoj_A          114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV--  191 (329)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE--
Confidence            999999999999999999999753               358999999999999999999999999999999999999  


Q ss_pred             cCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          163 RDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       163 ~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                       +.++.+||+|||+|+........          ...|||++.+ ..|+.++|+||+|+++ .+.++             
T Consensus       192 -~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl-~Ellt-------------  255 (329)
T 4aoj_A          192 -GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVL-WEIFT-------------  255 (329)
T ss_dssp             -ETTTEEEECCCC----------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHH-HHHHT-------------
T ss_pred             -CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcC-CCCCccccccchHHHH-HHHHc-------------
Confidence             77889999999999876432211          1228998876 5789999999995554 33321             


Q ss_pred             hCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          233 MDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ....+-...+..++...+..     .....+.+-.+.+.+++..|++.|+++.|.+..+.
T Consensus       256 ~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~  315 (329)
T 4aoj_A          256 YGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ  315 (329)
T ss_dssp             TSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence            01111112333444433332     11233444445555677889999999999887653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.3e-41  Score=318.14  Aligned_cols=246  Identities=17%  Similarity=0.178  Sum_probs=186.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .+....++++.+.||+|+||.||+|+..     .+++.||||++.....   ......+.+|+.+|+.| +|||||++++
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~---~~~~~~f~~E~~il~~l-~HpNIV~l~g   96 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---GPLREEFRHEAMLRARL-QHPNVVCLLG   96 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC---C-CHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC---hHHHHHHHHHHHHHHhC-CCCCCCCcce
Confidence            3455678999999999999999999863     4678999999865432   23456789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcc
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENF  158 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Ni  158 (436)
                      ++..++.+|+|||||++|+|.+++...                ..+++..+..++.||+.||.|||+++||||||||+||
T Consensus        97 ~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NI  176 (308)
T 4gt4_A           97 VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV  176 (308)
T ss_dssp             EECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccce
Confidence            999999999999999999999999753                3488999999999999999999999999999999999


Q ss_pred             eeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHH
Q 042392          159 CFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKE  228 (436)
Q Consensus       159 ll~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~  228 (436)
                      |+   +.++.+||+|||+|+........          ...|||++.+ ..|+.++|+||+|+.+ .+.++.        
T Consensus       177 Ll---~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl-~El~t~--------  243 (308)
T 4gt4_A          177 LV---YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVL-WEVFSY--------  243 (308)
T ss_dssp             EE---CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHHTT--------
T ss_pred             EE---CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhC-CCCCccchhhhHHHHH-HHHHhC--------
Confidence            99   77889999999999876443211          1229999876 5799999999995544 333210        


Q ss_pred             HhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          229 KFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       229 ~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                           ...+-.-.+..++...+..-     ....+.+-.+.+.++...|++.|+++.|.+..+.
T Consensus       244 -----g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~  302 (308)
T 4gt4_A          244 -----GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR  302 (308)
T ss_dssp             -----TCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -----CCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence                 11111123444454444431     1223444445566677888999999999877654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-41  Score=315.74  Aligned_cols=244  Identities=16%  Similarity=0.198  Sum_probs=182.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .|+...+++++.+.||+|+||+||+|++.   ..||||+++.....  ......+.+|+.+|+.+ +|||||++++++..
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~--~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~  103 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPT--PEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK  103 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCC--HHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCC--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC
Confidence            47778889999999999999999999854   35999998754432  34567799999999999 69999999998754


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                       +.+|||||||+||+|.+++... +++++..+..++.||+.||.|||+++||||||||+|||+   +.++.+||+|||+|
T Consensus       104 -~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla  179 (307)
T 3omv_A          104 -DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLA  179 (307)
T ss_dssp             -SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSC
T ss_pred             -CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCc
Confidence             5689999999999999999764 569999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccC----------CCCCCChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          178 LLFEEEG----------GEASDDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       178 ~~~~~~~----------~~~~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +......          .....|||++.+.  ..|+.++|+||+|+++ .+.++..             .+-.+.-....
T Consensus       180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl-~Elltg~-------------~Pf~~~~~~~~  245 (307)
T 3omv_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL-YELMTGE-------------LPYSHINNRDQ  245 (307)
T ss_dssp             BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH-HHHHHSS-------------CTTTTCCCHHH
T ss_pred             eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHH-HHHHHCC-------------CCCCCCChHHH
Confidence            8764321          1122399999753  3589999999995554 3333110             01111112222


Q ss_pred             HHHHHHh---------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          246 LRAGLTK---------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       246 L~~~l~~---------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +...+..         .....+.+-.+.+.+++..|++.|.++.|.+..+
T Consensus       246 ~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L  295 (307)
T 3omv_A          246 IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI  295 (307)
T ss_dssp             HHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred             HHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            3222221         1112333434455567788999999999988765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.8e-41  Score=323.41  Aligned_cols=200  Identities=19%  Similarity=0.286  Sum_probs=163.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .+.++|++.+.||+|+||+||+|+++   .+++.||||.+....      ....+.+|+++|+.+.+||||++++++|.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~   91 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRK   91 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence            46788999999999999999999875   467899999986543      234578999999998779999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+.+|+|||||+||+|.+++   +.+++.+++.+++||+.||.|||++||+||||||+|||+.  ...+.+||+|||+|+
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQ  166 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred             CCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCc
Confidence            99999999999999999998   3599999999999999999999999999999999999994  233799999999998


Q ss_pred             cccccC------------------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----
Q 042392          179 LFEEEG------------------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----  218 (436)
Q Consensus       179 ~~~~~~------------------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----  218 (436)
                      ......                                    .....|||++.+...|+.++|+||+| |++.+++    
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG-~il~ell~G~~  245 (361)
T 4f9c_A          167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG-VIFLSLLSGRY  245 (361)
T ss_dssp             ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH-HHHHHHHHTCS
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH-HHHHHHHHCCC
Confidence            653311                                    11122999998877899999999995 4444433    


Q ss_pred             ----ChhhHHHHHHHhhhh
Q 042392          219 ----PGEETQALKEKFIEM  233 (436)
Q Consensus       219 ----~~e~~~~l~~~F~~~  233 (436)
                          +.++...+..++..+
T Consensus       246 Pf~~~~~~~~~l~~I~~~~  264 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIR  264 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhc
Confidence                234556666665543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.8e-40  Score=334.91  Aligned_cols=190  Identities=25%  Similarity=0.369  Sum_probs=159.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHH---HHHHHhcCCCCCeeeceeeeec
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE---IQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E---~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .-+++|+++++||+|+||.||+|+++.+|+.||||++.+..... ......+.+|   +.+++.+ +|||||+++++|++
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~-~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~  263 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHT  263 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEEC
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch-hhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEE
Confidence            34578999999999999999999999999999999997653322 1222334444   5555666 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+.+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++|||||||||+|||+   +.+|++||+|||+|+
T Consensus       264 ~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLAC  340 (689)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceee
Confidence            99999999999999999999999999999999999999999999999999999999999999   788999999999998


Q ss_pred             cccccCCCC------CCChHHHHHHHHHHHhhhhhhHHHHHHHhc
Q 042392          179 LFEEEGGEA------SDDTSVILRMKQFRRMSKLKKLTVKVIVEY  217 (436)
Q Consensus       179 ~~~~~~~~~------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~  217 (436)
                      .+.......      ..|||++.+...|+.++|+||+|+. +.++
T Consensus       341 ~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvi-lYEm  384 (689)
T 3v5w_A          341 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM-LFKL  384 (689)
T ss_dssp             ECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH-HHHH
T ss_pred             ecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHH-HHHH
Confidence            875543222      1299999765579999999999544 4443

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.9e-39  Score=301.16  Aligned_cols=247  Identities=15%  Similarity=0.144  Sum_probs=177.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      +..+|.+.+.||+|+||.||+|++  +|+.||||++....     .......+|+..+..+ +|||||++++++..++  
T Consensus         1 Iar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~   72 (303)
T 3hmm_A            1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGT   72 (303)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSS
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCC
Confidence            346799999999999999999997  58999999986432     1222334566666778 6999999999987653  


Q ss_pred             --eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccccCCCCcceeeccCCCCcEE
Q 042392          101 --AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM--------GVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                        .+|||||||++|+|.+++... ++++..+..++.|++.||.|||++        +|+||||||+|||+   +.++.+|
T Consensus        73 ~~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~K  148 (303)
T 3hmm_A           73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC  148 (303)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEE
T ss_pred             ceEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEE
Confidence              589999999999999999764 589999999999999999999987        99999999999999   7889999


Q ss_pred             EEecCCcccccccCC------------CCCCChHHHHHH-----HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh-
Q 042392          171 VTDFGSALLFEEEGG------------EASDDTSVILRM-----KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE-  232 (436)
Q Consensus       171 l~DFG~a~~~~~~~~------------~~~~~pe~~~~~-----~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~-  232 (436)
                      |+|||+|+.......            ....|||++.+.     ..|+.++|+||+|+. +.+.++...      .|.. 
T Consensus       149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv-l~El~tg~~------~~~~~  221 (303)
T 3hmm_A          149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV-FWEIARRCS------IGGIH  221 (303)
T ss_dssp             ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH-HHHHHHTBC------BTTBC
T ss_pred             EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH-HHHHHHCCC------CCCcc
Confidence            999999987654321            112299998653     368999999999554 444331100      0000 


Q ss_pred             ------hCCCCCCccCHHHHHHHHHhcCC--CCC--------HHHHHH-HHHHHcCCCCCcccHHHHHHHHHh
Q 042392          233 ------MDTDKNGTLSYDELRAGLTKVGS--MLT--------EFDVKQ-LMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       233 ------~D~~~~g~i~~~eL~~~l~~~~~--~~s--------~~~i~~-l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                            +........+.+++...+..-+.  .++        ...+.. +.+++..|++.|+++.|.+..+..
T Consensus       222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence                  00011123445566555433221  111        123333 334567889999999998876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.3e-39  Score=326.35  Aligned_cols=245  Identities=24%  Similarity=0.349  Sum_probs=186.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.++|++++.||+|+||.||+|+++.+|+.||||++....    ......+.+|+.+|+.| +|||||+++++|.+.
T Consensus       152 ~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~  226 (573)
T 3uto_A          152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDD  226 (573)
T ss_dssp             SSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECS
T ss_pred             CCcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEEC
Confidence            3457789999999999999999999999999999999997654    23356788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+|||||+||+|++++.. .+.+++..++.+++||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+
T Consensus       227 ~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-~~~~~vKl~DFG~a~  305 (573)
T 3uto_A          227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTA  305 (573)
T ss_dssp             SEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCSSCE
T ss_pred             CEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-CCCCCEEEeecccee
Confidence            999999999999999999965 457999999999999999999999999999999999999943 234789999999999


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----C---hhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----P---GEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~---~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      .+.....       ....|||++.+ ..|+.++|+||+|+ ++.+++    +   ......+..+... +.....     
T Consensus       306 ~~~~~~~~~~~~GT~~y~APEv~~~-~~y~~~~DiWSlGv-ilyeml~G~~Pf~~~~~~~~~~~i~~~-~~~~~~-----  377 (573)
T 3uto_A          306 HLDPKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGV-LSYILLSGLSPFGGENDDETLRNVKSC-DWNMDD-----  377 (573)
T ss_dssp             ECCTTSEEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHH-HHHHHHHSCCSSCCSSHHHHHHHHHTT-CCCCCS-----
T ss_pred             EccCCCceeeeEECccccCHHHhCC-CCCCcHHHHHHHHH-HHHHHHHCCCCCCCcCHHHHHHHHHhC-CCCCCc-----
Confidence            8755322       12239999887 57899999999955 443433    1   1111112221111 000000     


Q ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          245 ELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       245 eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                             .....++.+-.+.+-+.+..|+..|++..|.+.+
T Consensus       378 -------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          378 -------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             -------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   0011344444455555677888888888887764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.4e-36  Score=288.38  Aligned_cols=243  Identities=24%  Similarity=0.321  Sum_probs=190.7

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++...+.
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~   88 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--PTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKT   88 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCE
Confidence            4567899999999999999999999999999999999765432  34456788999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||+++|+|.+++...+++++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|....
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGS
T ss_pred             EEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecC
Confidence            99999999999999999998899999999999999999999999999999999999999   788899999999998765


Q ss_pred             ccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          182 EEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       182 ~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ....       ....|||.+.+...++.++|+||+|+.+ .+.+..              ..+-...+..++...+..- 
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g--------------~~pf~~~~~~~~~~~i~~~~  230 (328)
T 3fe3_A          166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL-YTLVSG--------------SLPFDGQNLKELRERVLRGK  230 (328)
T ss_dssp             SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHH-HHHHHS--------------SCSSCCSSHHHHHHHHHHCC
T ss_pred             CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHH-HHHHhC--------------CCCCCCCCHHHHHHHHHhCC
Confidence            4321       1223999998765556899999996544 333210              0010112233333333221 


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 ---GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ---~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                         ....+.+-.+.+-+++..|+..|++..|.+..
T Consensus       231 ~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          231 YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence               22334444555666778899999999888754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-36  Score=292.95  Aligned_cols=248  Identities=26%  Similarity=0.335  Sum_probs=182.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|++..+++.||||++......     ...+.+|+.+++.+ +||||+++++++...
T Consensus        15 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   88 (361)
T 3uc3_A           15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-----DENVQREIINHRSL-RHPNIVRFKEVILTP   88 (361)
T ss_dssp             CCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-----CHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             CCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-----cHHHHHHHHHHHhC-CCCCCCcEEEEEeeC
Confidence            345567899999999999999999999999999999999765432     24578999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+|||||++|+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+.
T Consensus        89 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~-~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           89 THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKS  167 (361)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS-SSSCCEEECCCCCC--
T ss_pred             CEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCceEEEeecCcccc
Confidence            999999999999999999998888999999999999999999999999999999999999932 1223599999999975


Q ss_pred             ccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          180 FEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       180 ~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .....       .....+||++.+...++.++|+||+|++++ +.+...      ..|.   .. ...-........+..
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~-ell~g~------~Pf~---~~-~~~~~~~~~~~~~~~  236 (361)
T 3uc3_A          168 SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLY-VMLVGA------YPFE---DP-EEPRDYRKTIQRILS  236 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHH-HHHHSS------CSCC--------CCCHHHHHHHHHT
T ss_pred             ccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHH-HHHhCC------CCCC---CC-ccHHHHHHHHHHHhc
Confidence            43221       122339999987665667799999965543 322100      0010   00 001111222221111


Q ss_pred             cC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 VG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..      ...+.+-.+.+-+.+..|+..|+++.|.+.+
T Consensus       237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            11      1234555556666778899999999998865

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=288.97  Aligned_cols=190  Identities=23%  Similarity=0.297  Sum_probs=159.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....-.++|++.+.||+|+||.||+|+++.+++.||||++.+..... ......+.+|..+++.+.+||||+++++++.+
T Consensus        17 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ-DDDVECTMTEKRILSLARNHPFLTQLFCCFQT   95 (353)
T ss_dssp             ------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             cCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc-hhHHHHHHHHHHHHHhccCCCceeeEEEEEEe
Confidence            34455688999999999999999999999999999999997643222 23455678999999988679999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+.+|+|||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~  172 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCK  172 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEcccccee
Confidence            99999999999999999999998899999999999999999999999999999999999999   788999999999998


Q ss_pred             cccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........        ...|||++.+ ..|+.++|+||+|+.+
T Consensus       173 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  214 (353)
T 3txo_A          173 EGICNGVTTATFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLL  214 (353)
T ss_dssp             CSCC---------CCGGGCCHHHHHH-HHCTTHHHHHHHHHHH
T ss_pred             ecccCCccccccCCCcCeEChhhcCC-CCcCCccCCCcchHHH
Confidence            64332211        1238998876 5689999999995544

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.6e-35  Score=290.42  Aligned_cols=248  Identities=28%  Similarity=0.395  Sum_probs=190.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|.+..+|+.||+|++......  ......+.+|+.+++.+ +||||+++++++..
T Consensus         5 ~~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~   81 (444)
T 3soa_A            5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS--ARDHQKLEREARICRLL-KHPNIVRLHDSISE   81 (444)
T ss_dssp             --CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH--HHHHHHHHHHHHHHHHC-CBTTBCCEEEEEEC
T ss_pred             ccccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEE
Confidence            3456778999999999999999999999999999999999876543  23456789999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+.+|+|||||+||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+.....++.+||+|||+|.
T Consensus        82 ~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           82 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            99999999999999999999998899999999999999999999999999999999999999654466889999999998


Q ss_pred             cccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          179 LFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       179 ~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ........        ...|||++.+ ..|+.++|+||+|+.++ +.+..              ..+-..-+..++...+
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvily-ell~G--------------~~Pf~~~~~~~~~~~i  225 (444)
T 3soa_A          162 EVEGEQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILY-ILLVG--------------YPPFWDEDQHRLYQQI  225 (444)
T ss_dssp             CCCTTCCBCCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHH-HHHHS--------------SCSCCCSSHHHHHHHH
T ss_pred             EecCCCceeecccCCcccCCHHHhcC-CCCCCccccHHHHHHHH-HHHhC--------------CCCCCCccHHHHHHHH
Confidence            77543322        1228998865 46889999999965543 32210              0000011222222222


Q ss_pred             HhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..-.        ...+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       226 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          226 KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            2110        1234444555666778899999999998765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=6.7e-36  Score=297.13  Aligned_cols=256  Identities=20%  Similarity=0.233  Sum_probs=186.7

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      .+.++|++++.||+|+||.||+|++..+++.||||++......  ......+.+|+.+|+.+ +||||+++++++..   
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  126 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED--LIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDV  126 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCT
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC--HHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCc
Confidence            4668899999999999999999999999999999998654332  34456788999999999 69999999999843   


Q ss_pred             --CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 --ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 --~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                        ...+|+||||+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+
T Consensus       127 ~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGl  202 (458)
T 3rp9_A          127 EKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGL  202 (458)
T ss_dssp             TTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             ccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeeccccc
Confidence              357999999995 5999999888889999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccC-----------------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC--
Q 042392          177 ALLFEEEG-----------------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP--  219 (436)
Q Consensus       177 a~~~~~~~-----------------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~--  219 (436)
                      |+......                                   .....|||++.....|+.++|+||+ +|++.+.++  
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSl-G~il~elltg~  281 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI-GCIFAELLNMI  281 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHH-HHHHHHHHTTS
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHH-HHHHHHHHHhc
Confidence            98764321                                   1113399988766779999999999 455444432  


Q ss_pred             ------------------------------------hhhHHHHHHHhhhhCCCCCCc---cCHHHHHHHHHhcC------
Q 042392          220 ------------------------------------GEETQALKEKFIEMDTDKNGT---LSYDELRAGLTKVG------  254 (436)
Q Consensus       220 ------------------------------------~e~~~~l~~~F~~~D~~~~g~---i~~~eL~~~l~~~~------  254 (436)
                                                          .....++..++..++.++...   +........+..+.      
T Consensus       282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (458)
T 3rp9_A          282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD  361 (458)
T ss_dssp             TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred             cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                                                112455666666665443211   11122222222211      


Q ss_pred             -----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          255 -----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       255 -----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                           ...+.+-++.+-+++..|+..|++..|.+.+
T Consensus       362 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             GGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                 2235555666667788889999998887765

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=7.9e-36  Score=289.35  Aligned_cols=247  Identities=21%  Similarity=0.249  Sum_probs=183.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-.++|+++++||+|+||.||+|+++.+++.||||++.+..... ......+.+|..+++.+.+||||+++++++.+..
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES  126 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC
Confidence            445678999999999999999999999999999999998754332 2333457889999988767999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCC
T ss_pred             EEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeec
Confidence            999999999999999999998899999999999999999999999999999999999999   78899999999999863


Q ss_pred             cccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCC-CCccCHHHHHHHHH
Q 042392          181 EEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDK-NGTLSYDELRAGLT  251 (436)
Q Consensus       181 ~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~  251 (436)
                      ......        ...|||++.+ ..|+.++|+||+|+.+ .+.+...      ..|...+... ........+...+.
T Consensus       204 ~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~~DiwslGvll-yell~G~------~Pf~~~~~~~~~~~~~~~~~~~~i~  275 (396)
T 4dc2_A          204 LRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLM-FEMMAGR------SPFDIVGSSDNPDQNTEDYLFQVIL  275 (396)
T ss_dssp             CCTTCCBCCCCBCGGGCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS------CSSTTTTC------CCHHHHHHHHH
T ss_pred             ccCCCccccccCCcccCCchhhcC-CCCChHHHHHHHHHHH-HHHHhCC------CCCcccccccccchhhHHHHHHHHh
Confidence            322111        1228998876 5688999999995544 3332100      0111111000 01122233333332


Q ss_pred             h----cCCCCCHHHHHHHHHHHcCCCCCcccH
Q 042392          252 K----VGSMLTEFDVKQLMEAADMDGNGAIDY  279 (436)
Q Consensus       252 ~----~~~~~s~~~i~~l~~~~d~d~~g~i~~  279 (436)
                      .    +...++.+-.+.+-+.+..|+..|++.
T Consensus       276 ~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          276 EKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            2    223445555555666678888888874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.6e-35  Score=292.00  Aligned_cols=258  Identities=21%  Similarity=0.272  Sum_probs=200.2

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-.+.++|++.+.||+|+||.||+|++..+++.||||++......  ......+.+|+.+|+.+ +||||+++++++...
T Consensus        21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED--LIDCKRILREITILNRL-KSDYIIRLYDLIIPD   97 (432)
T ss_dssp             GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTS--HHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred             cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcC--hHHHHHHHHHHHHHHHc-CCCCcceEEEEEecC
Confidence            445778999999999999999999999999999999999754322  34556789999999999 699999999999766


Q ss_pred             -----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          100 -----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       100 -----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                           ..+|+||||+.+ +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        98 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DF  173 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDF  173 (432)
T ss_dssp             CTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCC
T ss_pred             CCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccC
Confidence                 579999999975 999999888889999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC------------------------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-----
Q 042392          175 GSALLFEEEGG------------------------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-----  219 (436)
Q Consensus       175 G~a~~~~~~~~------------------------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-----  219 (436)
                      |+|+.......                              ....|||++.....|+.++|+||+| |++.+.+.     
T Consensus       174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG-~il~ell~g~~p~  252 (432)
T 3n9x_A          174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG-CIFAELLNMLQSH  252 (432)
T ss_dssp             TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH-HHHHHHHTTCTTT
T ss_pred             CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHH-HHHHHHHhccccc
Confidence            99987654221                              1123999987767899999999994 55444431     


Q ss_pred             ------------------------------hhhHHHHHHHhhhhCCCCCC---ccCHHHHHHHHHhcC-----------C
Q 042392          220 ------------------------------GEETQALKEKFIEMDTDKNG---TLSYDELRAGLTKVG-----------S  255 (436)
Q Consensus       220 ------------------------------~e~~~~l~~~F~~~D~~~~g---~i~~~eL~~~l~~~~-----------~  255 (436)
                                                    .....++..++..+..++..   .+...+....+..+.           .
T Consensus       253 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (432)
T 3n9x_A          253 INDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYP  332 (432)
T ss_dssp             CSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHST
T ss_pred             ccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCC
Confidence                                          12356666777766654431   123333444444332           2


Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       333 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          333 SISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            345555666667778888888988887764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.3e-35  Score=282.52  Aligned_cols=184  Identities=27%  Similarity=0.366  Sum_probs=159.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++++.||+|+||.||+|+++.+|+.||||++.+..... ......+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEE
Confidence            578999999999999999999999999999999997643211 23345688999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccC
Confidence            999999999999999988889999999999999999999999999999999999999   78899999999999864332


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...        ...|||++.+ ..|+.++|+||+|+.+
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  195 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM  195 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHH
T ss_pred             CCcccccccChhhCChhhhcC-CCCCchhhcccchhHH
Confidence            211        1228998765 4688999999995544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=7.8e-36  Score=288.40  Aligned_cols=254  Identities=21%  Similarity=0.317  Sum_probs=190.0

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |++........++|++++.||+|+||.||+|++..+++.||+|++.+..... ......+.+|+.+++.+ +||||++++
T Consensus         4 p~~~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~Iv~l~   81 (384)
T 4fr4_A            4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE-RNEVRNVFKELQIMQGL-EHPFLVNLW   81 (384)
T ss_dssp             ----CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred             CccCCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc-HHHHHHHHHHHHHHHhC-CCCCCCcEE
Confidence            4444556667789999999999999999999999999999999997643222 23346788999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      +++.+...+|+||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~D  158 (384)
T 4fr4_A           82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITD  158 (384)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECC
T ss_pred             EEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEec
Confidence            9999999999999999999999999988889999999999999999999999999999999999999   7889999999


Q ss_pred             cCCcccccccCCCC-------CCChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          174 FGSALLFEEEGGEA-------SDDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       174 FG~a~~~~~~~~~~-------~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      ||+|+.+.......       ..|||++.+.  ..|+.++|+||+|+.+ .+.+...      ..|   .  ........
T Consensus       159 FG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il-~elltG~------~Pf---~--~~~~~~~~  226 (384)
T 4fr4_A          159 FNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA-YELLRGR------RPY---H--IRSSTSSK  226 (384)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH-HHHHHSS------CSS---C--CCTTSCHH
T ss_pred             cceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHH-HHHHhCC------CCC---C--CCCCccHH
Confidence            99998765432211       2289988642  3578899999995544 3332100      001   1  01112333


Q ss_pred             HHHHHHHhc----CCCCCHHHHHHHHHHHcCCCCCccc-HHHHHH
Q 042392          245 ELRAGLTKV----GSMLTEFDVKQLMEAADMDGNGAID-YTEFTA  284 (436)
Q Consensus       245 eL~~~l~~~----~~~~s~~~i~~l~~~~d~d~~g~i~-~~EF~~  284 (436)
                      ++...+...    ....+.+-.+.+-+.+..|+..|++ .++++.
T Consensus       227 ~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          227 EIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            333333321    2234444455555567778888887 666553

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.5e-35  Score=274.80  Aligned_cols=188  Identities=24%  Similarity=0.341  Sum_probs=163.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.++|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-EETLKRFEREVHNSSQL-SHQNIVSMIDVDEED   83 (294)
T ss_dssp             SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC-HHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECS
T ss_pred             hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc-HHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeC
Confidence            4567789999999999999999999999999999999987654433 45567789999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||++|++|.+++...+++++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|..
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~  160 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKA  160 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTT
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCccc
Confidence            9999999999999999999998899999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccC---------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEG---------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~---------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....         .....+||.+.+ ..++.++|+||+|+.+
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l  202 (294)
T 4eqm_A          161 LSETSLTQTNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIVL  202 (294)
T ss_dssp             C-------------CCSSCCHHHHHT-CCCCTTHHHHHHHHHH
T ss_pred             cccccccccCccccCccccCHhHhcC-CCCCchHhHHHHHHHH
Confidence            65432         112238998876 4678899999996554

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3e-35  Score=281.17  Aligned_cols=245  Identities=21%  Similarity=0.256  Sum_probs=184.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.++|++.+.||+|+||.||+|+++.+++.||||++.+..... ......+.+|..+++.+.+||||+++++++.+...+
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            4578999999999999999999999999999999998764433 344567889999999886799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccC
Confidence            9999999999999999988889999999999999999999999999999999999999   7889999999999986432


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCC-CCccCHHHHHHHHHh-
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDK-NGTLSYDELRAGLTK-  252 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~~-  252 (436)
                      ....        ...|||++.+ ..|+.++|+||+|+.+ .+.+...      ..|...+... ...-....+...+.. 
T Consensus       163 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il-~ell~g~------~pf~~~~~~~~~~~~~~~~~~~~i~~~  234 (345)
T 3a8x_A          163 PGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLM-FEMMAGR------SPFDIVGSSDNPDQNTEDYLFQVILEK  234 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS------CTTTTTTC-------CHHHHHHHHHHC
T ss_pred             CCCcccccCCCccccCccccCC-CCCChHHhHHHHHHHH-HHHHhCC------CCcCCcccccccccccHHHHHHHHHcC
Confidence            2111        1228998876 4688999999995544 3333110      1111111100 001122333332222 


Q ss_pred             ---cCCCCCHHHHHHHHHHHcCCCCCcccH
Q 042392          253 ---VGSMLTEFDVKQLMEAADMDGNGAIDY  279 (436)
Q Consensus       253 ---~~~~~s~~~i~~l~~~~d~d~~g~i~~  279 (436)
                         +....+.+-.+.+-+.+..|+..|++.
T Consensus       235 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          235 QIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence               223345544555556677888888874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=3.3e-35  Score=274.66  Aligned_cols=253  Identities=21%  Similarity=0.253  Sum_probs=188.3

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++..+++.||||++......  ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   78 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS--TTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc--CCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEE
Confidence            6899999999999999999999999999999999765533  23456788999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||||++ +|.+.+.. .+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|......
T Consensus        79 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           79 VFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSC
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCc
Confidence            9999986 77776665 5679999999999999999999999999999999999999   77889999999999876532


Q ss_pred             CCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC--------ChhhHHHHHHHhhhhCCCCCCccCH-HHH
Q 042392          184 GGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL--------PGEETQALKEKFIEMDTDKNGTLSY-DEL  246 (436)
Q Consensus       184 ~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l--------~~e~~~~l~~~F~~~D~~~~g~i~~-~eL  246 (436)
                      ...        ...|||.+.+...|+.++|+||+|+.++ +.+        .......+..++............. ..+
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~-~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA-ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH-HHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHH-HHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence            221        1238999887666899999999965543 333        1233344555555444332221100 000


Q ss_pred             HH-----------HHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          247 RA-----------GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       247 ~~-----------~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..           .+.......+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            00           0000111234444555666677888888888887653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=5e-35  Score=281.03  Aligned_cols=246  Identities=27%  Similarity=0.372  Sum_probs=186.5

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ...+.++|++.+.||+|+||.||+|+++.+|+.||+|++.+......  ......+.+|+.+++.+ +||||+++++++.
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~   85 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYE   85 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEE
Confidence            34677899999999999999999999999999999999987643221  11346788999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC----cEEEEe
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA----LLKVTD  173 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~----~~kl~D  173 (436)
                      +...+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+.   ..+    .+||+|
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~---~~~~~~~~vkl~D  162 (361)
T 2yab_A           86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL---DKNIPIPHIKLID  162 (361)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES---CTTSSSCCEEECC
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---CCCCCccCEEEEe
Confidence            9999999999999999999998888899999999999999999999999999999999999994   333    799999


Q ss_pred             cCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          174 FGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       174 FG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      ||+|.........       ...|||++.+ ..|+.++|+||+|+.++ +.+...             .+-.+ -+..++
T Consensus       163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~-~ll~g~-------------~Pf~~-~~~~~~  226 (361)
T 2yab_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY-ILLSGA-------------SPFLG-DTKQET  226 (361)
T ss_dssp             CSSCEECCTTCCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHH-HHHHSC-------------CSSCC-SSHHHH
T ss_pred             cCCceEcCCCCccccCCCCccEECchHHcC-CCCCccccHHHHHHHHH-HHHhCC-------------CCCCC-CCHHHH
Confidence            9999876543221       1228888765 46889999999965543 322000             00001 111222


Q ss_pred             HHHHHhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          247 RAGLTKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       247 ~~~l~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...+....        ...+.+-.+.+-+.+..|+..|++..|.+.+
T Consensus       227 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            22111111        1234444445555677889999999887754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-35  Score=279.81  Aligned_cols=185  Identities=22%  Similarity=0.336  Sum_probs=160.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -.++|++.+.||+|+||.||+|++..+|+.||+|++.+..... ......+.+|+.+++.+ +||||+++++++.+...+
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEE
Confidence            3578999999999999999999999999999999997643221 22345678999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC
Confidence            9999999999999999988889999999999999999999999999999999999999   7889999999999987654


Q ss_pred             cCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGG-----EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...     ....|||++.+ ..|+.++|+||+|+.+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  193 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILI  193 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHH
T ss_pred             ccccccCCccccCHhHhcC-CCCCcccchhhhHHHH
Confidence            322     12238998865 4688999999995544

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.9e-35  Score=282.16  Aligned_cols=188  Identities=21%  Similarity=0.309  Sum_probs=159.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|++.+.||+|+||.||+|+++.+|+.||||++.+..... ......+.+|..+++.+.+||||+++++++.+..
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            345678999999999999999999999999999999997643211 2234567789999987757999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhc
Confidence            999999999999999999988889999999999999999999999999999999999999   77889999999999864


Q ss_pred             cccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......        ...|||++.+ ..|+.++|+||+|+.+
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  208 (345)
T 1xjd_A          169 MLGDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLL  208 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ccCCCcccCCCCCcccCChhhhcC-CCCCChhhhHHHHHHH
Confidence            322111        1228998876 4688999999995544

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-35  Score=283.45  Aligned_cols=258  Identities=19%  Similarity=0.248  Sum_probs=192.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..-.+..+|++.+.||+|+||.||+|.+..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++..
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~   95 (367)
T 1cm8_A           19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS--ELFAKRAYRELRLLKHM-RHENVIGLLDVFTP   95 (367)
T ss_dssp             SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS--HHHHHHHHHHHHHHHHC-CBTTBCCCSEEECS
T ss_pred             ceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC--HHHHHHHHHHHHHHHhC-CCcCCCCceeeEec
Confidence            3445678999999999999999999999999999999998654322  34456788999999999 69999999999976


Q ss_pred             CC------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 ET------AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ~~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      ..      .+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~  170 (367)
T 1cm8_A           96 DETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKIL  170 (367)
T ss_dssp             CSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEEC
T ss_pred             CCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEE
Confidence            53      469999999 7799998876 569999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC-
Q 042392          173 DFGSALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG-  239 (436)
Q Consensus       173 DFG~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g-  239 (436)
                      |||+|+........     ...|||++.+...|+.++|+||+|+ ++.+.+       +......+..++.....++.. 
T Consensus       171 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~-il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~  249 (367)
T 1cm8_A          171 DFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC-IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF  249 (367)
T ss_dssp             CCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHH-HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             eeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHH-HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            99999876543221     1239999988678999999999954 444433       334556666666665554321 


Q ss_pred             --ccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 --TLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 --~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        .+........+..+.           ...+..-.+.+-+++..|++.|++..|.+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence              112222233333321           2335555666667778889999999887764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=6.2e-35  Score=280.95  Aligned_cols=249  Identities=25%  Similarity=0.395  Sum_probs=188.6

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      .....+.++|++.+.||+|+||.||+|.+..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++.
T Consensus        22 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~   98 (362)
T 2bdw_A           22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKL-QHPNIVRLHDSIQ   98 (362)
T ss_dssp             --CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             cCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC--HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEE
Confidence            34556778999999999999999999999999999999999765433  23456788999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ..+.+|+|||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A           99 EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            99999999999999999999988888999999999999999999999999999999999999965444567999999999


Q ss_pred             ccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          178 LLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       178 ~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ........       ....|||++.+ ..|+.++|+||+|+.++ +.+..              ..+-...+..++...+
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-~ll~g--------------~~Pf~~~~~~~~~~~i  242 (362)
T 2bdw_A          179 IEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILY-ILLVG--------------YPPFWDEDQHRLYAQI  242 (362)
T ss_dssp             BCCTTCCSCCCSCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHH-HHHHS--------------SCSSCCSSHHHHHHHH
T ss_pred             eEecCCcccccCCCCccccCHHHHcc-CCCCchhhHHHHHHHHH-HHHHC--------------CCCCCCCCHHHHHHHH
Confidence            87654322       12238998865 46889999999965543 32210              0000011222222222


Q ss_pred             HhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..-.        ...+.+-.+.+-+++..|++.|++..+.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          243 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            2111        1123343444555677888889998887654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.3e-34  Score=274.72  Aligned_cols=246  Identities=26%  Similarity=0.398  Sum_probs=185.8

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|.++.+++.||||++.+....        ..+|+.++..+.+||||+++++++.+
T Consensus        16 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------~~~E~~~l~~~~~hp~iv~~~~~~~~   87 (342)
T 2qr7_A           16 NSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD--------PTEEIEILLRYGQHPNIITLKDVYDD   87 (342)
T ss_dssp             ---CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC--------CHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             cccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC--------hHHHHHHHHHhcCCCCcCeEEEEEEc
Confidence            3456788999999999999999999999999999999999765422        34688888888679999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-CCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-~~~~~kl~DFG~a  177 (436)
                      ...+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+ ..+.+||+|||+|
T Consensus        88 ~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            999999999999999999999888899999999999999999999999999999999999985322 2246999999999


Q ss_pred             ccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          178 LLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       178 ~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      +.......        ....|||++.+ ..|+.++|+||+|+.+ .+.+...      ..|   ..  ....+..++...
T Consensus       168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il-~ell~g~------~Pf---~~--~~~~~~~~~~~~  234 (342)
T 2qr7_A          168 KQLRAENGLLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLL-YTMLTGY------TPF---AN--GPDDTPEEILAR  234 (342)
T ss_dssp             EECBCTTCCBCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHH-HHHHHSS------CSS---CS--STTSCHHHHHHH
T ss_pred             ccCcCCCCceeccCCCccccCHHHhcC-CCCCCccCeeeHhHHH-HHHhcCC------CCC---CC--CCcCCHHHHHHH
Confidence            87654321        12238998876 5689999999995544 3332100      001   10  011234444443


Q ss_pred             HHhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          250 LTKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       250 l~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +..-.        ...+.+-.+.+-+++..|+..|++..+.+.+
T Consensus       235 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          235 IGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            33211        2345554555666778899999998887653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.3e-35  Score=280.53  Aligned_cols=188  Identities=27%  Similarity=0.376  Sum_probs=162.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++++.||+|+||.||+|++..+|+.||||++.+..... ......+.+|+.+++.+ +||||+++++++.+.
T Consensus        36 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDN  113 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             cCCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc-HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcC
Confidence            3446689999999999999999999999999999999997543221 23345688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+|+||||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEccccccee
Confidence            9999999999999999999998889999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......     ...+||++.+ ..|+.++|+||+|+.+
T Consensus       191 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  228 (350)
T 1rdq_E          191 VKGRTWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLI  228 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             ccCCcccccCCccccCHHHhcC-CCCCCcCCEecccHhH
Confidence            6543221     1238998876 4688999999995544

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.6e-35  Score=280.29  Aligned_cols=264  Identities=23%  Similarity=0.282  Sum_probs=184.3

Q ss_pred             ccCCCcccccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch-hhHHHHHHHHHHHHHh
Q 042392            4 CVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRL   82 (436)
Q Consensus         4 ~~~~~~~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~E~~~l~~   82 (436)
                      |...+.......+......+.++|++.+.||+|+||.||+|+++.+++.||||++........ ......+.+|+.+++.
T Consensus         3 ~g~~~~~g~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~   82 (351)
T 3c0i_A            3 PGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM   82 (351)
T ss_dssp             -----------------CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccccccCCCCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHh
Confidence            333333333333334445677899999999999999999999999999999999865321110 1134678899999999


Q ss_pred             cCCCCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcc
Q 042392           83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENF  158 (436)
Q Consensus        83 l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Ni  158 (436)
                      + +||||+++++++...+.+|+|||||+|++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus        83 l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NI  161 (351)
T 3c0i_A           83 L-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCV  161 (351)
T ss_dssp             C-CCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             C-CCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHe
Confidence            9 6999999999999999999999999999998888653    2489999999999999999999999999999999999


Q ss_pred             eeeccCCCCcEEEEecCCcccccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHh
Q 042392          159 CFISRDDNALLKVTDFGSALLFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKF  230 (436)
Q Consensus       159 ll~~~~~~~~~kl~DFG~a~~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F  230 (436)
                      |+...+....+||+|||+|.........        ...+||++.+ ..|+.++|+||+|+.++ +.+...         
T Consensus       162 l~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-~ll~g~---------  230 (351)
T 3c0i_A          162 LLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILF-ILLSGC---------  230 (351)
T ss_dssp             EECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHH-HHHHSS---------
T ss_pred             EEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHH-HHHHCC---------
Confidence            9954444456999999999877553321        1228998876 46889999999955443 322100         


Q ss_pred             hhhCCCCCCccCHHHHHHHHHhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          231 IEMDTDKNGTLSYDELRAGLTKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       231 ~~~D~~~~g~i~~~eL~~~l~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          .+-.+  ...++...+..-.        ...+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       231 ----~pf~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          231 ----LPFYG--TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             ----CSSCS--SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ----CCCCC--cHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                00000  0111111111100        1234444555666778899999999988754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-35  Score=286.46  Aligned_cols=209  Identities=23%  Similarity=0.329  Sum_probs=161.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+..+|++.+.||+|+||.||+|.+..+|+.||||++......  ......+.+|+.+++.+.+||||+++++++...
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~   81 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN--STDAQRTFREIMILTELSGHENIVNLLNVLRAD   81 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC
Confidence            456778999999999999999999999999999999998654322  344567889999999996699999999999754


Q ss_pred             C--eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 T--AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~--~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      +  .+|+|||||++ +|..++.. +.+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|
T Consensus        82 ~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a  156 (388)
T 3oz6_A           82 NDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLS  156 (388)
T ss_dssp             TSSCEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             CCCEEEEEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCccc
Confidence            3  79999999975 99998876 469999999999999999999999999999999999999   78889999999999


Q ss_pred             ccccccC-----------------------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------Chh
Q 042392          178 LLFEEEG-----------------------------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGE  221 (436)
Q Consensus       178 ~~~~~~~-----------------------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e  221 (436)
                      +.+....                             .....|||++.+...|+.++|+||+|+ ++.+.+       +..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~-il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC-ILGEILCGKPIFPGSS  235 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHH-HHHHHHHSSCSCCCSS
T ss_pred             ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHH-HHHHHHhCCCCCCCCC
Confidence            8753310                             111239999987678899999999954 444433       334


Q ss_pred             hHHHHHHHhhhhCCC
Q 042392          222 ETQALKEKFIEMDTD  236 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~  236 (436)
                      ....+..++..++.+
T Consensus       236 ~~~~~~~i~~~~~~p  250 (388)
T 3oz6_A          236 TMNQLERIIGVIDFP  250 (388)
T ss_dssp             HHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHhcCCC
Confidence            555666666555543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5e-35  Score=280.18  Aligned_cols=188  Identities=23%  Similarity=0.316  Sum_probs=159.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++++.||+|+||.||+|+++.+++.||||++.+..... ......+.+|..++..+.+||||+++++++.+.+
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc-chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            345678999999999999999999999999999999997643221 2334567889999988767999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCccccc
Confidence            999999999999999999988889999999999999999999999999999999999999   78899999999999864


Q ss_pred             cccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......        ...|||++.+ ..|+.++|+||+|+.+
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  211 (353)
T 2i0e_A          172 IWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL  211 (353)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTT-CCBSTHHHHHHHHHHH
T ss_pred             ccCCcccccccCCccccChhhhcC-CCcCCcccccchHHHH
Confidence            322111        1228998865 4688999999995544

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.8e-34  Score=270.27  Aligned_cols=183  Identities=26%  Similarity=0.336  Sum_probs=159.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|.+..+++.||||++......    ....+.+|+.+++.+ +||||+++++++...+
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN-KNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcC-CCCCCCeEeEEEEECC
Confidence            34667899999999999999999999999999999998755432    245688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++... .+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEEC
T ss_pred             EEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceec
Confidence            999999999999999998765 59999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......        ..+||.+.+ ..|+.++|+||+|+.+
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  206 (297)
T 3fxz_A          167 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMA  206 (297)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHHC-SCBCTHHHHHHHHHHH
T ss_pred             CCcccccCCccCCcCccChhhhcC-CCCCcHHHHHHHHHHH
Confidence            5432211        228998876 4688999999996554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-35  Score=275.28  Aligned_cols=241  Identities=19%  Similarity=0.319  Sum_probs=183.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....     .....+.+|+.+++.+ +||||+++++++...+.
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~   75 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIA-RHRNILHLHESFESMEE   75 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCE
Confidence            46789999999999999999999999999999999986542     3345688999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+.. ..++.+||+|||+|...
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~-~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc-CCCCCEEEEECCCCeEC
Confidence            999999999999999997654 6999999999999999999999999999999999999942 12689999999999876


Q ss_pred             cccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc
Q 042392          181 EEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV  253 (436)
Q Consensus       181 ~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~  253 (436)
                      .....       ....+||++.+ ..++.++|+||+|+.++ +.++.              ..+-...+..++...+...
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-~ll~g--------------~~pf~~~~~~~~~~~i~~~  218 (321)
T 1tki_A          155 KPGDNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVY-VLLSG--------------INPFLAETNQQIIENIMNA  218 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHH-HHHHS--------------SCTTCCSSHHHHHHHHHHT
T ss_pred             CCCCccccccCChhhcCcHHhcC-CCCCchhhHHHHHHHHH-HHHhC--------------CCCCcCCCHHHHHHHHHcC
Confidence            54321       12338998876 46789999999965543 32210              0000011122222222111


Q ss_pred             C--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 G--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .        ...+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       219 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1        1234444455555678889999999998765

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=6.6e-35  Score=275.12  Aligned_cols=260  Identities=20%  Similarity=0.251  Sum_probs=189.3

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ....+.+.++|++.+.||+|+||.||+|++. +++.||+|++......  ......+.+|+.+++.+ +||||+++++++
T Consensus        13 ~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~   88 (311)
T 3niz_A           13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAED--EGIPSTAIREISLLKEL-HHPNIVSLIDVI   88 (311)
T ss_dssp             --CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC--------CHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ceeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccccc--chhhHHHHHHHHHHHHc-CCCCEeeeeeEE
Confidence            3467889999999999999999999999985 5899999998755322  23446788999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      .....+|+||||+++ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg  164 (311)
T 3niz_A           89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFG  164 (311)
T ss_dssp             CCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred             ccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCc
Confidence            999999999999986 8888887654 49999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC-
Q 042392          176 SALLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG-  239 (436)
Q Consensus       176 ~a~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g-  239 (436)
                      +|+.......        ....|||++.+...|+.++|+||+|+.++ +.+       +......+..++..+...... 
T Consensus       165 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  243 (311)
T 3niz_A          165 LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA-EMITGKPLFPGVTDDDQLPKIFSILGTPNPRE  243 (311)
T ss_dssp             TCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH-HHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTT
T ss_pred             CceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH-HHHhCCCCCCCCChHHHHHHHHHHHCCCChHH
Confidence            9987643211        12239999987677899999999965543 322       112223334444433332211 


Q ss_pred             ccCHHHHHHHHH------------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 TLSYDELRAGLT------------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 ~i~~~eL~~~l~------------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .....++..+..            ......+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             SGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            111111111111            1112344455566666778888888888887753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.1e-34  Score=270.11  Aligned_cols=245  Identities=19%  Similarity=0.249  Sum_probs=186.5

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++.......  .....+.+|+..+..+.+||||+++++++...+.
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~   85 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH   85 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS--HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence            35678999999999999999999999999999999997654332  3456788999999998669999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-------------
Q 042392          102 VHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-------------  164 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-------------  164 (436)
                      +|+||||+++++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||++...+             
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            99999999999999999875    6699999999999999999999999999999999999994322             


Q ss_pred             ---CCCcEEEEecCCcccccccCCCC----CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCC
Q 042392          165 ---DNALLKVTDFGSALLFEEEGGEA----SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       165 ---~~~~~kl~DFG~a~~~~~~~~~~----~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~  237 (436)
                         ....+||+|||++..........    ..+||.+.+...++.++|+||+|+.+ .+.++...             ..
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~~~~-------------~~  231 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEP-------------LP  231 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHH-HHHTTCCC-------------CC
T ss_pred             ccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHH-HHHhcCCC-------------CC
Confidence               44579999999998876543332    22999988766788999999995544 33332110             00


Q ss_pred             CCccCHHHHHHHHH----hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          238 NGTLSYDELRAGLT----KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       238 ~g~i~~~eL~~~l~----~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...   ..+.....    .+....+.+-.+.+-+++..|++.|++..+.+.+
T Consensus       232 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          232 RNG---DQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             SSS---HHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             cch---hHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            000   11111111    1122344444555566778888999999887753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.7e-35  Score=280.59  Aligned_cols=243  Identities=23%  Similarity=0.344  Sum_probs=183.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++.+.||+|+||.||+|++..+++.||||++......   .....+.+|+.+++.+ +||||+++++++...+..
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~   80 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKML-NHENVVKFYGHRREGNIQ   80 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeE
Confidence            568999999999999999999999999999999998654322   2335678999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|..+..
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEE
T ss_pred             EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceecc
Confidence            9999999999999999877789999999999999999999999999999999999999   7788999999999986543


Q ss_pred             cCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          183 EGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       183 ~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      ...          ....+||++.+...++.++|+||+|++++ +.+...      ..   ++....   ....+..+...
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~-~ll~g~------~p---f~~~~~---~~~~~~~~~~~  224 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT-AMLAGE------LP---WDQPSD---SCQEYSDWKEK  224 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH-HHHHSS------CS---CSSSCT---TSHHHHHHHTT
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH-HHHhCC------CC---CCCCch---HHHHHHHHhcc
Confidence            211          11238999987655688999999965543 322100      00   111111   01111221111


Q ss_pred             cC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 VG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..     ...+..-.+.+-+++..|++.|++..|.+..
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          225 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            11     1234444556666788899999999888754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.1e-36  Score=284.57  Aligned_cols=243  Identities=25%  Similarity=0.349  Sum_probs=183.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++....... ......+.+|+.+++.+ +||||+++++++..++.
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~   83 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-SDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTD   83 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc-hhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence            45678999999999999999999999999999999987543221 22235688999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||+ +|+|.+++...+++++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|....
T Consensus        84 ~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           84 IVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             EEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTT
T ss_pred             EEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceecc
Confidence            99999999 67999999988899999999999999999999999999999999999999   778899999999998765


Q ss_pred             ccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          182 EEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       182 ~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ....       ....|||++.+...++.++|+||+|+.++ +.+    +... .....++...   ..+.          
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~-~ll~g~~Pf~~-~~~~~~~~~i---~~~~----------  224 (336)
T 3h4j_B          160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY-VMLVGRLPFDD-EFIPNLFKKV---NSCV----------  224 (336)
T ss_dssp             TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHH-HHHHSSCSSBC-SSSTTCBCCC---CSSC----------
T ss_pred             CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHH-HHHhCCCCCCC-ccHHHHHHHH---HcCC----------
Confidence            4321       12238998887555578999999966543 322    1110 0000000000   0000          


Q ss_pred             HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+....+.+-.+.+-+++..|+..|++..|.+..
T Consensus       225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            01122234444444555667888999999888754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.4e-34  Score=277.80  Aligned_cols=248  Identities=16%  Similarity=0.185  Sum_probs=186.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEEC-------CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTEN-------STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      +...++|++.+.||+|+||.||+|++.       .++..||||++.....   ......+.+|+.+++.+.+||||++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB---HHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC---HHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            445678999999999999999999975       3456799999875532   334567899999999996699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                      +++...+.+|+||||+++|+|.+++....                .++...++.++.||+.||.|||++||+||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            99999999999999999999999998753                37889999999999999999999999999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHH
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALK  227 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~  227 (436)
                      ||+   +.++.+||+|||+|+........          ...|||.+.+ ..|+.++|+||+|+.++ +.++.       
T Consensus       234 Ill---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~-ellt~-------  301 (370)
T 2psq_A          234 VLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMW-EIFTL-------  301 (370)
T ss_dssp             EEE---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHH-HHHTT-------
T ss_pred             EEE---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHH-HHHcC-------
Confidence            999   77889999999999866432211          1238998876 46889999999955543 32210       


Q ss_pred             HHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          228 EKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       228 ~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                            ...+-...+..++...+..-     ....+.+-.+.+-+++..|++.|+++.|++..+...
T Consensus       302 ------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          302 ------GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             ------SCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  01111112222333322221     122333444455556788889999999998776443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.1e-34  Score=275.50  Aligned_cols=190  Identities=25%  Similarity=0.360  Sum_probs=151.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      +.....++|++.+.||+|+||.||+|++.   .+++.||+|++.+............+.+|+.+++.+ +||||++++++
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~   89 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYA   89 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEE
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEE
Confidence            34456689999999999999999999985   689999999997654332233445678999999999 69999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      +...+.+|+|||||+|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg  166 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFG  166 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCS
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCC
Confidence            99999999999999999999999988889999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          176 SALLFEEEG--------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       176 ~a~~~~~~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +|+......        .....+||.+.+ ..|+.++|+||+|+.+
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  211 (327)
T 3a62_A          167 LCKESIHDGTVTHTFCGTIEYMAPEILMR-SGHNRAVDWWSLGALM  211 (327)
T ss_dssp             CC----------CTTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHHH
T ss_pred             cccccccCCccccccCCCcCccCHhhCcC-CCCCCcccchhHHHHH
Confidence            998643321        122338998865 4678899999995544

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.1e-34  Score=272.34  Aligned_cols=245  Identities=27%  Similarity=0.360  Sum_probs=185.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      +.+.++|++.+.||+|+||.||+|++..+|+.||+|++........  ......+.+|+.+++.+ +||||+++++++..
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   85 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN   85 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEe
Confidence            4577889999999999999999999999999999999976543221  12356788999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC----cEEEEec
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA----LLKVTDF  174 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~----~~kl~DF  174 (436)
                      ...+|+|||||++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++    .+||+||
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll---~~~~~~~~~~kl~Df  162 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML---LDRNVPKPRIKIIDF  162 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---SCSSSSSCCEEECCC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEE---ecCCCCCCCEEEEEC
Confidence            99999999999999999999888889999999999999999999999999999999999999   4444    7999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |+|........       ....+||++.+ ..|+.++|+||+|+.++ +.+...             .+-.+ .+..+..
T Consensus       163 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-~ll~g~-------------~pf~~-~~~~~~~  226 (326)
T 2y0a_A          163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY-ILLSGA-------------SPFLG-DTKQETL  226 (326)
T ss_dssp             TTCEECCTTSCCCCCCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHH-HHHHSC-------------CSSCC-SSHHHHH
T ss_pred             CCCeECCCCCccccccCCcCcCCceeecC-CCCCcHHHHHHHHHHHH-HHHHCc-------------CCCCC-CCHHHHH
Confidence            99987653221       12238888765 46888999999965543 322100             00011 1112222


Q ss_pred             HHHHhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+....        ...+..-.+.+-+++..|+..|++..|.+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          227 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            2222111        1233333444555677888999999998764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.4e-34  Score=280.25  Aligned_cols=253  Identities=17%  Similarity=0.229  Sum_probs=192.9

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |+....|....++|++.+.||+|+||.||+|++..+++.||||++.....   ......+.+|+.+|+.+ +||||++++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~  178 (377)
T 3cbl_A          103 AVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP---PDLKAKFLQEARILKQY-SHPNIVRLI  178 (377)
T ss_dssp             ECCCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC---HHHHTTTTHHHHHHTTC-CCTTBCCEE
T ss_pred             CccccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC---HHHHHHHHHHHHHHHhC-CCCCEEEEE
Confidence            33345567777899999999999999999999999999999999875432   23345678999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +++...+.+|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus       179 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~  255 (377)
T 3cbl_A          179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKIS  255 (377)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEEC
T ss_pred             EEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEEC
Confidence            99999999999999999999999998754 59999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          173 DFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       173 DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      |||+|+.......          ....|||.+.+ ..|+.++|+||+|+.+ .+.++             ....+-...+
T Consensus       256 DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il-~el~t-------------~g~~p~~~~~  320 (377)
T 3cbl_A          256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNY-GRYSSESDVWSFGILL-WETFS-------------LGASPYPNLS  320 (377)
T ss_dssp             CGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHH-HHHHT-------------TSCCSSTTSC
T ss_pred             cCCCceecCCCceeecCCCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHH-HHHHh-------------CCCCCCCCCC
Confidence            9999986543211          11338998875 4688999999995544 33221             0111222233


Q ss_pred             HHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          243 YDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       243 ~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..++...+..-.     ...+.+-.+.+-+++..|++.|+++.+.+..+..
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          321 NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            444444433311     1223333344555677889999999998876543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.7e-35  Score=289.84  Aligned_cols=248  Identities=24%  Similarity=0.301  Sum_probs=189.0

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ......++|.+.+.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++..
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~   87 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-LDVVGKIRREIQNLKLF-RHPHIIKLYQVIST   87 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH-TTTHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            34456789999999999999999999999999999999997543211 22345788999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|.
T Consensus        88 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~  164 (476)
T 2y94_A           88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSN  164 (476)
T ss_dssp             SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchh
Confidence            99999999999999999999888889999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .......       ....|||++.+...++.++|+||+|+.+ .+.+...      .   .++    +.-....+.....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil-~elltG~------~---Pf~----~~~~~~~~~~i~~  230 (476)
T 2y94_A          165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVIL-YALLCGT------L---PFD----DDHVPTLFKKICD  230 (476)
T ss_dssp             ECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHH-HHHHHSS------C---SSC----CSSSHHHHHHHHT
T ss_pred             hccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHH-HHHhhCC------C---CCC----CCCHHHHHHHHhc
Confidence            7654321       1223999988755557899999995544 3322100      0   001    1111111112211


Q ss_pred             h---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 K---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .   .....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       231 ~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          231 GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             TCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            1   112344444555556678889999999988764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.8e-34  Score=277.73  Aligned_cols=257  Identities=18%  Similarity=0.218  Sum_probs=193.8

Q ss_pred             cccccccccccccccceeeeeeecccCCeEEEEEE-----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC
Q 042392           11 QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG   85 (436)
Q Consensus        11 ~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   85 (436)
                      .+.|.-.+.++...++|++.+.||+|+||.||+|+     +..+++.||||++.....   ......+.+|+.+++.+.+
T Consensus         8 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~   84 (359)
T 3vhe_A            8 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGH   84 (359)
T ss_dssp             GGSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCC
T ss_pred             hhCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC---HHHHHHHHHHHHHHHhhcC
Confidence            35677777888999999999999999999999999     456678999999975432   2345678999999999977


Q ss_pred             CCCeeeceeeeecCC-eEEEEEeccCCCChHHHHHHcCC-----------------------------------------
Q 042392           86 QPNIVELKSAHEDET-AVHVVMELCQGGDLFDRIIAKGY-----------------------------------------  123 (436)
Q Consensus        86 h~niv~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~-----------------------------------------  123 (436)
                      ||||+++++++...+ .+|+|||||++|+|.+++.....                                         
T Consensus        85 hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (359)
T 3vhe_A           85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS  164 (359)
T ss_dssp             CTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred             CcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence            999999999988754 49999999999999999986532                                         


Q ss_pred             -------------------------CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          124 -------------------------YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       124 -------------------------~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                                               +++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~  241 (359)
T 3vhe_A          165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLAR  241 (359)
T ss_dssp             -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGS
T ss_pred             cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEecccee
Confidence                                     8899999999999999999999999999999999999   677899999999998


Q ss_pred             cccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          179 LFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       179 ~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      ........          ...+||.+.+ ..|+.++|+||+|+++ .+.++ ..             .+-.+.-....+.
T Consensus       242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il-~ellt~g~-------------~p~~~~~~~~~~~  306 (359)
T 3vhe_A          242 DIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL-WEIFSLGA-------------SPYPGVKIDEEFC  306 (359)
T ss_dssp             CTTSCTTCEEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHTTTSC-------------CSSTTCCCSHHHH
T ss_pred             eecccccchhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHH-HHHHhcCC-------------CCCCccchhHHHH
Confidence            66432211          1238998876 5688999999995544 44332 10             0011111112222


Q ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          248 AGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       248 ~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+..-     ....+.+-.+.+.+++..|+..|+++.|.+..+..
T Consensus       307 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          307 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            222221     12234444455556678888999999999877654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.2e-34  Score=270.41  Aligned_cols=185  Identities=23%  Similarity=0.357  Sum_probs=159.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++.+.||+|+||.||+|++..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus         1 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   77 (311)
T 4agu_A            1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD--PVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRL   77 (311)
T ss_dssp             --CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             CcccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeE
Confidence            357899999999999999999999999999999998665432  34456788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++++|..++...+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|.....
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             EEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC-
T ss_pred             EEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccC
Confidence            9999999999999888877889999999999999999999999999999999999999   7788999999999987653


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....        ...+||.+.+...|+.++|+||+|+.+
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  193 (311)
T 4agu_A          155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVF  193 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHH
T ss_pred             cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHH
Confidence            2221        123899998767789999999996554

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.4e-33  Score=262.71  Aligned_cols=246  Identities=26%  Similarity=0.331  Sum_probs=185.8

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      .....+.++|++.+.||+|+||.||+|.+..++..||+|++......   .....+.+|+.+++.+ +||||+++++++.
T Consensus        15 ~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~   90 (285)
T 3is5_A           15 YFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ---VPMEQIEAEIEVLKSL-DHPNIIKIFEVFE   90 (285)
T ss_dssp             EESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC---SCHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             CCCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc---hhHHHHHHHHHHHHhC-CCchHHhHHHhee
Confidence            34456889999999999999999999999999999999998765422   2346788999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      ....+|+||||+++|+|.+++...    ..+++..++.++.|++.||.|||+.||+||||||+||++...+..+.+||+|
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~D  170 (285)
T 3is5_A           91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID  170 (285)
T ss_dssp             CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEe
Confidence            999999999999999999988653    5699999999999999999999999999999999999996545567899999


Q ss_pred             cCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          174 FGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       174 FG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      ||+|.........       ...+||.+.+  .++.++|+||+|+.++ +.+.              ...+-...+..++
T Consensus       171 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~il~-~ll~--------------g~~pf~~~~~~~~  233 (285)
T 3is5_A          171 FGLAELFKSDEHSTNAAGTALYMAPEVFKR--DVTFKCDIWSAGVVMY-FLLT--------------GCLPFTGTSLEEV  233 (285)
T ss_dssp             CCCCCC----------CTTGGGCCHHHHTT--CCCHHHHHHHHHHHHH-HHHH--------------SSCSSCCSSHHHH
T ss_pred             eecceecCCcccCcCcccccCcCChHHhcc--CCCcccCeehHHHHHH-HHHh--------------CCCCCCCCCHHHH
Confidence            9999876543221       1228888753  6788999999965543 3221              0011111223333


Q ss_pred             HHHHHhcC-------CCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          247 RAGLTKVG-------SMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       247 ~~~l~~~~-------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ........       .+.+.+-.+.+-+++..|+..|++..|.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          234 QQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            32222111       123445555666677888999999988774

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.5e-34  Score=278.89  Aligned_cols=187  Identities=24%  Similarity=0.365  Sum_probs=151.8

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHH-HHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~niv~~~~~~~~~   99 (436)
                      ....++|++++.||+|+||.||+|+++.+++.||||++.+..... ......+.+|..+ ++.+ +||||+++++++.+.
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~  111 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTA  111 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCC-CCTTBCCEEEEEECS
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeC
Confidence            345678999999999999999999999999999999998764432 2334456677776 4556 799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGG
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccc
Confidence            9999999999999999999988889999999999999999999999999999999999999   7889999999999986


Q ss_pred             ccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......        ....|||++.+ ..|+.++|+||+|+.+
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  229 (373)
T 2r5t_A          189 NIEHNSTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVL  229 (373)
T ss_dssp             GBCCCCCCCSBSCCCCCCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             cccCCCccccccCCccccCHHHhCC-CCCCchhhhHHHHHHH
Confidence            432211        12238998876 4688999999995544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=270.12  Aligned_cols=245  Identities=18%  Similarity=0.229  Sum_probs=184.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    ......+.+|+.+++.+ +||||+++++++...+..|
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD----EETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeE
Confidence            468999999999999999999999999999999885432    34566789999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|+....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVD  160 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC-
T ss_pred             EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceeccc
Confidence            99999999999999988 4569999999999999999999999999999999999999   7788999999999987643


Q ss_pred             cCCC----------------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC-CCCCC
Q 042392          183 EGGE----------------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD-TDKNG  239 (436)
Q Consensus       183 ~~~~----------------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D-~~~~g  239 (436)
                      ....                      ...+||.+.+ ..|+.++|+||+|++++ +.++..      ..|.... ....-
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~g~------~~~~~~~~~~~~~  232 (310)
T 3s95_A          161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLC-EIIGRV------NADPDYLPRTMDF  232 (310)
T ss_dssp             -------------------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHH-HHHHTC------CSSTTTSCBCTTS
T ss_pred             ccccccccccccccccccccccCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHH-HHhcCC------CCCcchhhhHHHH
Confidence            2211                      1238888876 56888999999965543 322100      0000000 01111


Q ss_pred             ccCHHHHHHHHHh-cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          240 TLSYDELRAGLTK-VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       240 ~i~~~eL~~~l~~-~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ......   .+.. .....+..-.+.+-+++..|+..|+++.+.+..+.
T Consensus       233 ~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~  278 (310)
T 3s95_A          233 GLNVRG---FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE  278 (310)
T ss_dssp             SBCHHH---HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhhhc---cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            112222   2222 23333434444555677888899999998877654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6.6e-35  Score=286.50  Aligned_cols=187  Identities=24%  Similarity=0.346  Sum_probs=159.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.++||+|+||.||+|+++.+++.||||++.+..... ......+.+|+.+++.+ +||||+++++++.+.+.
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~  148 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNG-DSKWITTLHYAFQDDNN  148 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCE
Confidence            44578999999999999999999999999999999997532211 11223478899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+|||||+||+|.+++.. .+.+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+..
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhc
Confidence            9999999999999999987 4679999999999999999999999999999999999999   78899999999999876


Q ss_pred             cccCC---------CCCCChHHHHHH----HHHHHhhhhhhHHHHH
Q 042392          181 EEEGG---------EASDDTSVILRM----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~---------~~~~~pe~~~~~----~~~~~~~d~~s~~~~~  213 (436)
                      .....         ....|||++.+.    ..|+.++|+||+|+.+
T Consensus       226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil  271 (437)
T 4aw2_A          226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM  271 (437)
T ss_dssp             CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHH
T ss_pred             ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHH
Confidence            44322         112299998743    4688999999995544

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.5e-34  Score=269.63  Aligned_cols=253  Identities=23%  Similarity=0.265  Sum_probs=186.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++.+.||+|+||.||+|++ .+++.||+|++......  ......+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   76 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED--EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLV   76 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc--cccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEE
Confidence            36899999999999999999998 67999999998765432  22335678999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++... +.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+|.....
T Consensus        77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGI  152 (288)
T ss_dssp             EEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC
T ss_pred             EEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCc
Confidence            99999986 999998764 569999999999999999999999999999999999999   7788999999999986543


Q ss_pred             cC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCcc-CHHHH
Q 042392          183 EG--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTL-SYDEL  246 (436)
Q Consensus       183 ~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i-~~~eL  246 (436)
                      ..        .....|||.+.+...|+.++|+||+|+.+ .+.+       +......+..++..+........ ...++
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T 1ob3_A          153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF-AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL  231 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             cccccccccccccccCchheeCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcc
Confidence            21        12233999987766789999999996554 3322       12233444445444333221110 00000


Q ss_pred             HHH-----------HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          247 RAG-----------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       247 ~~~-----------l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...           ...+....+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            000           001112345555566666778888889988887653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.8e-34  Score=273.83  Aligned_cols=246  Identities=29%  Similarity=0.454  Sum_probs=172.3

Q ss_pred             cccceeee---eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           23 VMLHYSFG---RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        23 ~~~~y~~~---~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      +..+|.+.   +.||+|+||.||+|.+..+++.||||++...       ....+.+|+.+++.+.+||||+++++++.+.
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            44667775   7899999999999999999999999998643       2356779999999996699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+|+|||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...+....+||+|||+|+.
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~  158 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL  158 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred             CEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence            99999999999999999999988899999999999999999999999999999999999995444445899999999986


Q ss_pred             ccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          180 FEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       180 ~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .......        ...+||.+.+ ..|+.++|+||+|+.++ +.+...      ..|...+. ........++...+.
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~-~ll~g~------~pf~~~~~-~~~~~~~~~~~~~i~  229 (325)
T 3kn6_A          159 KPPDNQPLKTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILY-TMLSGQ------VPFQSHDR-SLTCTSAVEIMKKIK  229 (325)
T ss_dssp             CCC-----------------------CCCCHHHHHHHHHHHHH-HHHHSS------CTTC--------CCCHHHHHHHHT
T ss_pred             cCCCCCcccccCCCcCccCHHHhcC-CCCCCccchHHHHHHHH-HHHhCC------CCCCCCcc-ccccccHHHHHHHHH
Confidence            6443221        1238888765 46889999999965543 322100      00111110 001122233333222


Q ss_pred             hcCC--------CCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          252 KVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       252 ~~~~--------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .-..        ..+.+-.+.+-+.+..|+..|++..|.+.
T Consensus       230 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             TTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             cCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            2111        23444445555667778888888777653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=3.2e-34  Score=268.33  Aligned_cols=257  Identities=20%  Similarity=0.232  Sum_probs=187.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      +......+|++.+.||+|+||.||+|+    +..+++.||||++....    ......+.+|+.+++.+ +||||+++++
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~   78 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSL-QHDNIVKYKG   78 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----HHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----HHHHHHHHHHHHHHHhC-CCCCEeeEEE
Confidence            345567899999999999999999998    56789999999987543    34456788999999999 6999999999


Q ss_pred             eeecC--CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           95 AHEDE--TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        95 ~~~~~--~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      ++...  ..+|+||||+++|+|.+++.... .+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||
T Consensus        79 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl  155 (295)
T 3ugc_A           79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKI  155 (295)
T ss_dssp             EECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEE
T ss_pred             EEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE---cCCCeEEE
Confidence            98543  56899999999999999998754 49999999999999999999999999999999999999   66789999


Q ss_pred             EecCCcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-----hhhHHHHHHHhhhhCC
Q 042392          172 TDFGSALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-----GEETQALKEKFIEMDT  235 (436)
Q Consensus       172 ~DFG~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-----~e~~~~l~~~F~~~D~  235 (436)
                      +|||+|.........           ...+||.+.+ ..|+.++|+||+|++++ +.++     .....   ........
T Consensus       156 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-~l~~g~~~~~~~~~---~~~~~~~~  230 (295)
T 3ugc_A          156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLY-ELFTYIEKSKSPPA---EFMRMIGN  230 (295)
T ss_dssp             CCCCSCC-------------CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHHTTCTTCSHHH---HHHHHHCT
T ss_pred             ccCcccccccCCcceeeeccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHHH-HHHhcccccCCChH---HHHhhhcC
Confidence            999999876442210           1238998876 46889999999965543 3321     11111   11222333


Q ss_pred             CCCCccCHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          236 DKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       236 ~~~g~i~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ...+......+...+..-.     ...+.+-.+.+-+++..|++.|+++.|.+..+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             TCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            4444444444444444321     2233444444555667888889999998876543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.2e-34  Score=275.64  Aligned_cols=260  Identities=24%  Similarity=0.304  Sum_probs=186.9

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      .+.....++|++.+.||+|+||.||+|++..+++.||||++......  ......+.+|+.+++.+ +||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  103 (329)
T 3gbz_A           27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE--EGVPGTAIREVSLLKEL-QHRNIIELKSVIH  103 (329)
T ss_dssp             -----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGC-CCTTBCCEEEEEE
T ss_pred             CCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc--cccchhHHHHHHHHHHc-CCCCcceEEEEEe
Confidence            34566788999999999999999999999999999999999765432  23345677999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc--CCCCcEEEEecC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR--DDNALLKVTDFG  175 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~--~~~~~~kl~DFG  175 (436)
                      ....+|+||||+++ +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+...  +..+.+||+|||
T Consensus       104 ~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          104 HNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             ETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             cCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            99999999999985 999999998889999999999999999999999999999999999999532  234569999999


Q ss_pred             CcccccccC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc
Q 042392          176 SALLFEEEG--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       176 ~a~~~~~~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +|+......        .....+||++.+...|+.++|+||+|+.+ .+.+       .......+..++..+..+....
T Consensus       183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  261 (329)
T 3gbz_A          183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIW-AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT  261 (329)
T ss_dssp             HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHH-HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence            998764321        12234999998766789999999996554 3332       2334445555554443322211


Q ss_pred             cC----------------HHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          241 LS----------------YDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       241 i~----------------~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..                ...+...+   ....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          262 WPGVTALPDWKQSFPKFRGKTLKRVL---GALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             STTGGGSTTCCTTCCCCCCCCHHHHH---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhhhccccHhhhc---ccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            00                00011111   11134444556666777888888888877653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.5e-34  Score=270.45  Aligned_cols=189  Identities=23%  Similarity=0.343  Sum_probs=157.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|++..+++.||||++......   .....+.+|+.+++.+ +||||+++++++....
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT   80 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc---chHHHHHHHHHHHHhc-CCCCcceEEEEeecCC
Confidence            35667899999999999999999999999999999998754322   2345678999999999 6999999999987654


Q ss_pred             --eEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec-cCCCCcEEEEec
Q 042392          101 --AVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS-RDDNALLKVTDF  174 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~-~~~~~~~kl~DF  174 (436)
                        .+|+||||+++++|.+++.....   +++..++.++.||+.||.|||+.||+||||||+|||+.. .+..+.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Df  160 (319)
T 4euu_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (319)
T ss_dssp             TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred             CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccC
Confidence              78999999999999999987543   899999999999999999999999999999999999732 245567999999


Q ss_pred             CCcccccccCCC-------CCCChHHHHHH-------HHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGGE-------ASDDTSVILRM-------KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~~-------~~~~pe~~~~~-------~~~~~~~d~~s~~~~~  213 (436)
                      |+|+........       ...+||++.+.       ..|+.++|+||+|+++
T Consensus       161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il  213 (319)
T 4euu_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF  213 (319)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHH
T ss_pred             CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHH
Confidence            999876554322       12289988752       5688899999996554

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=3.7e-34  Score=272.15  Aligned_cols=185  Identities=23%  Similarity=0.359  Sum_probs=154.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC-
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET-  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-  100 (436)
                      .+.++|++.+.||+|+||.||+|++..+|+.||||++.....   ......+.+|+.+++.+ +||||+++++++.... 
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKL-EHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST---TTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCS
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEecc
Confidence            356789999999999999999999999999999999975542   23456789999999999 6999999999885543 


Q ss_pred             --------------------------------------------------------eEEEEEeccCCCChHHHHHHcCC-
Q 042392          101 --------------------------------------------------------AVHVVMELCQGGDLFDRIIAKGY-  123 (436)
Q Consensus       101 --------------------------------------------------------~~~iv~e~~~~g~L~~~l~~~~~-  123 (436)
                                                                              .+|+|||||++++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    38999999999999999987644 


Q ss_pred             --CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC----------------
Q 042392          124 --YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----------------  185 (436)
Q Consensus       124 --~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------------  185 (436)
                        .++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+|+.......                
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG  235 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhccccccccccccccc
Confidence              4566789999999999999999999999999999999   7788999999999987755321                


Q ss_pred             ----CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 ----EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                          ....+||.+.+ ..|+.++|+||+|+.++
T Consensus       236 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~  267 (332)
T 3qd2_B          236 QVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILF  267 (332)
T ss_dssp             CC-CGGGSCHHHHHC-CCCCTHHHHHHHHHHHH
T ss_pred             cCCCcCccChHHhcC-CCCcchhhHHHHHHHHH
Confidence                11228998876 46889999999965554

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.6e-33  Score=261.12  Aligned_cols=245  Identities=26%  Similarity=0.375  Sum_probs=187.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|.+..++..||+|++......    ....+.+|+.+++.+ +||||+++++++..
T Consensus         3 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   77 (277)
T 3f3z_A            3 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE----DVDRFKQEIEIMKSL-DHPNIIRLYETFED   77 (277)
T ss_dssp             ---CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             chhhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc----hHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            4456788999999999999999999999999999999998765432    245688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...+|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++...+.++.+||+|||++.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           78 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            99999999999999999999988889999999999999999999999999999999999999655567899999999998


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .......       ....+||.+.+  .++.++|+||+|+.++ +.+.              ...+-...+..++...+.
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~-~l~~--------------g~~p~~~~~~~~~~~~~~  220 (277)
T 3f3z_A          158 RFKPGKMMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMY-VLLC--------------GYPPFSAPTDSEVMLKIR  220 (277)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHHHTT--CBCTTHHHHHHHHHHH-HHHH--------------SSCSSCCSSHHHHHHHHH
T ss_pred             eccCccchhccCCCCCccChHHhcc--cCCchhhehhHHHHHH-HHHH--------------CCCCCCCCCHHHHHHHHH
Confidence            7654322       12238998765  4889999999965543 3221              011111122223332222


Q ss_pred             hcCC--------CCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 KVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~~~~--------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .-..        ..+..-.+.+-+++..|+..|++..+.+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          221 EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             hCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2111        233344445555678888889998887653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=9.5e-34  Score=268.84  Aligned_cols=248  Identities=17%  Similarity=0.203  Sum_probs=186.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .+....+|++.+.||+|+||.||+|.+..++.   .||||++.....   ......+.+|+.+++.+ +||||+++++++
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~  119 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT---ERQRRDFLSEASIMGQF-DHPNIIRLEGVV  119 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC---HHHHHHHHHHHHHHHhC-CCCCCCcEEEEE
Confidence            34556789999999999999999999986655   499999975432   33456789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      ...+.+|+||||+++|+|.+++... +.+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg  196 (325)
T 3kul_A          120 TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFG  196 (325)
T ss_dssp             CGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCS
T ss_pred             EeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCC
Confidence            9999999999999999999999765 569999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          176 SALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       176 ~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      +|+........           ...+||.+.+ ..|+.++|+||+|++++ +.+.             ....+-...+..
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-ell~-------------~g~~p~~~~~~~  261 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMW-EVLA-------------YGERPYWNMTNR  261 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHH-HHHT-------------TSCCTTTTSCHH
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHH-HHHc-------------CCCCCcccCCHH
Confidence            99876542211           1338888865 46889999999965543 3221             011111112233


Q ss_pred             HHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          245 ELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       245 eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++...+..-     ....+..-.+.+-+++..|+..|+++.+.+..+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          262 DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            333322221     112344444555566788888899999988776443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.3e-35  Score=284.69  Aligned_cols=188  Identities=26%  Similarity=0.331  Sum_probs=160.3

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|++.++||+|+||.||+|+++.+|+.||||++.+..... ......+.+|..++..+ +||||+++++++.+.+
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~-~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-RGEVSCFREERDVLVNG-DRRWITQLHFAFQDEN  134 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-HGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSS
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCC
Confidence            345678999999999999999999999999999999997532211 22234578899999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+|||||+||+|.+++.+.+ .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~  211 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLK  211 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhhee
Confidence            9999999999999999998764 69999999999999999999999999999999999999   7889999999999987


Q ss_pred             ccccCC---------CCCCChHHHHHH------HHHHHhhhhhhHHHHH
Q 042392          180 FEEEGG---------EASDDTSVILRM------KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~---------~~~~~pe~~~~~------~~~~~~~d~~s~~~~~  213 (436)
                      ......         ....|||++.+.      ..|+.++|+||+|+.+
T Consensus       212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvil  260 (412)
T 2vd5_A          212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA  260 (412)
T ss_dssp             CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHH
T ss_pred             ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHH
Confidence            654322         112299999853      3588999999995544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4.3e-34  Score=273.82  Aligned_cols=187  Identities=34%  Similarity=0.572  Sum_probs=149.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|++..+++.||||++....      ....+.+|+.+++.+ +||||+++++++..
T Consensus        47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l-~h~niv~~~~~~~~  119 (349)
T 2w4o_A           47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRL-SHPNIIKLKEIFET  119 (349)
T ss_dssp             BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHC-CCTTBCCEEEEEEC
T ss_pred             ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhC-CCCCCcceeeeEec
Confidence            34567788999999999999999999999999999999987542      234578999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ...+|+||||+++|+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+...+.++.+||+|||+++
T Consensus       120 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            99999999999999999999888889999999999999999999999999999999999999543447899999999998


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......       ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  240 (349)
T 2w4o_A          200 IVEHQVLMKTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIIT  240 (349)
T ss_dssp             -------------CGGGSCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             ccCcccccccccCCCCccCHHHhcC-CCCCcccchHHHHHHH
Confidence            7654321       11238888875 4688899999995554

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4e-35  Score=285.87  Aligned_cols=186  Identities=28%  Similarity=0.395  Sum_probs=157.5

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|+++.+++.||+|++.+..... ......+.+|+.+++.+ +||||+++++++.+...
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~  143 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRY  143 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence            34578999999999999999999999999999999997532111 11223477899999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus       144 ~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          144 LYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             EEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeec
Confidence            9999999999999999876 469999999999999999999999999999999999999   788999999999998765


Q ss_pred             ccCC---------CCCCChHHHHHHH---HHHHhhhhhhHHHHH
Q 042392          182 EEGG---------EASDDTSVILRMK---QFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~---------~~~~~pe~~~~~~---~~~~~~d~~s~~~~~  213 (436)
                      ....         ....|||++.+..   .|+.++|+||+|+.+
T Consensus       220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvil  263 (410)
T 3v8s_A          220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  263 (410)
T ss_dssp             TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHH
T ss_pred             cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHH
Confidence            4321         1122999998643   278899999995544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3e-33  Score=260.17  Aligned_cols=245  Identities=26%  Similarity=0.397  Sum_probs=187.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++...+.
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF   79 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC--HHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCE
Confidence            4678999999999999999999999999999999999765432  23456788999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      .|+||||+++++|.+.+.....+++..++.++.|++.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus        80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            99999999999999999988889999999999999999999999999999999999999544445569999999998765


Q ss_pred             ccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC
Q 042392          182 EEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG  254 (436)
Q Consensus       182 ~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~  254 (436)
                      .....       ...+||.+.+ ..++.++|+||+|+.++ +.+..              ..+-...+..++...+..-.
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-~l~~g--------------~~pf~~~~~~~~~~~~~~~~  223 (284)
T 3kk8_A          160 DSEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILY-ILLVG--------------YPPFWDEDQHRLYAQIKAGA  223 (284)
T ss_dssp             SSCBCCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHH-HHHHS--------------SCSSCCSSHHHHHHHHHHTC
T ss_pred             cCccccCCCCCcCCcCchhhcC-CCCCcccchHHHHHHHH-HHHHC--------------CCCCCCCchhHHHHHHHhcc
Confidence            43321       1228888765 46788999999966543 22210              00001112222222222111


Q ss_pred             --------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          255 --------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       255 --------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                              ...+.+-.+.+-+++..|++.|++..|.+..
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                    1234444445555677888889998887764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=4.2e-33  Score=263.28  Aligned_cols=189  Identities=24%  Similarity=0.367  Sum_probs=157.1

Q ss_pred             cccccceeee-eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSFG-RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ..+.++|++. +.||+|+||.||+|++..+++.||||++.....    .....+.+|+.+++.+.+||||+++++++...
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~   83 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE   83 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            4567889995 789999999999999999999999999976532    23456889999999865799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++...+....+||+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            99999999999999999999888899999999999999999999999999999999999994333334599999999986


Q ss_pred             ccccC---------------CCCCCChHHHHH----HHHHHHhhhhhhHHHHH
Q 042392          180 FEEEG---------------GEASDDTSVILR----MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~---------------~~~~~~pe~~~~----~~~~~~~~d~~s~~~~~  213 (436)
                      .....               .....+||.+.+    ...|+.++|+||+|+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il  216 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL  216 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH
Confidence            54211               112238999875    35688999999995544

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.2e-34  Score=272.38  Aligned_cols=253  Identities=19%  Similarity=0.218  Sum_probs=173.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++......   .....+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---GTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLT   79 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTT---CSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---ccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEE
Confidence            46899999999999999999999999999999999765422   2234678999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          104 VVMELCQGGDLFDRIIAK------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      +||||+++ +|.+++...      ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        80 lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~  155 (317)
T 2pmi_A           80 LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLA  155 (317)
T ss_dssp             EEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSC
T ss_pred             EEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCccc
Confidence            99999985 999998764      348999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCcc-
Q 042392          178 LLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTL-  241 (436)
Q Consensus       178 ~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i-  241 (436)
                      +.......        ....|||++.+...|+.++|+||+|+.+ .+.+       +......+..++..+........ 
T Consensus       156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCIL-AEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             EETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred             eecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence            87643211        1223999988766788999999996554 3332       22333444555544433221110 


Q ss_pred             ---------------CHHHHHHHHHh-cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          242 ---------------SYDELRAGLTK-VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       242 ---------------~~~eL~~~l~~-~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                                     ....+...+.. .....+.+-.+.+-+++..|++.|++..|.+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence                           00111222222 122344444555556677788888888776643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.1e-34  Score=274.66  Aligned_cols=249  Identities=16%  Similarity=0.140  Sum_probs=185.2

Q ss_pred             ccccccceeeeeeecccCCeEEEEEE-----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .+....+|++.+.||+|+||.||+|+     +..+++.||||++.....   ......+.+|+.+++.+ +||||+++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~  141 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---EQDELDFLMEALIISKF-NHQNIVRCIG  141 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC---HHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC---hhhHHHHHHHHHHHHhC-CCCCCCeEEE
Confidence            45567889999999999999999999     445788999999865432   23445688999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG-------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      ++......|+|||||++|+|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||+...+.+.
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  221 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  221 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCc
Confidence            9999999999999999999999998753       488999999999999999999999999999999999995433455


Q ss_pred             cEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCC
Q 042392          168 LLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       168 ~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~  237 (436)
                      .+||+|||+|+.......          ....+||.+.+ ..|+.++|+||+|+.+ .+.++             ....+
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il-~ellt-------------~g~~p  286 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLL-WEIFS-------------LGYMP  286 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHHT-------------TSCCS
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHH-HHHHh-------------CCCCC
Confidence            799999999986533211          11238998876 4688999999995544 33321             01111


Q ss_pred             CCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          238 NGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       238 ~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      -...+..++...+..-     ....+..-.+.+-+++..|+..|+++.+.+..+.
T Consensus       287 f~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~  341 (367)
T 3l9p_A          287 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE  341 (367)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            1122333444333321     1223444444555667888899999999887654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-33  Score=271.28  Aligned_cols=248  Identities=17%  Similarity=0.196  Sum_probs=189.4

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCC-------CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENST-------NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      .++...++|++.+.||+|+||.||+|++..+       +..||||++.....   ......+.+|+.+++.+.+||||++
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hpnIv~  139 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIIN  139 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC---HHHHHHHHHHHHHHHHhcCCchhhh
Confidence            4567778999999999999999999997543       35799999876532   3345678899999999966999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCC
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKP  155 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp  155 (436)
                      +++++...+.+|+||||+++|+|.+++....                .+++..++.++.||+.||.|||+.||+||||||
T Consensus       140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  219 (382)
T 3tt0_A          140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  219 (382)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCc
Confidence            9999999999999999999999999998754                489999999999999999999999999999999


Q ss_pred             CcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHH
Q 042392          156 ENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQA  225 (436)
Q Consensus       156 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~  225 (436)
                      +|||+   +.++.+||+|||+|+........          ...+||.+.+ ..++.++|+||+|+.++ +.+.      
T Consensus       220 ~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~-ellt------  288 (382)
T 3tt0_A          220 RNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLW-EIFT------  288 (382)
T ss_dssp             GGEEE---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHH-HHHT------
T ss_pred             ceEEE---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC-CCCCchhHHHHHHHHHH-HHHh------
Confidence            99999   77889999999999876432210          1238998876 56889999999965543 2221      


Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                             ....+-...+..++...+..-     ....+.+-.+.+-+++..|++.|+++.|.+..+.
T Consensus       289 -------~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  348 (382)
T 3tt0_A          289 -------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD  348 (382)
T ss_dssp             -------TSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -------CCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                   011111223344444443331     1233444444455567788889999999887653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.2e-34  Score=283.96  Aligned_cols=244  Identities=23%  Similarity=0.259  Sum_probs=177.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ....++|++.+.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHD  221 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCC-SCTTSCCEEEEEEETT
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-hHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCC
Confidence            345678999999999999999999999999999999997542211 23345677899999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++|+|.+++...+.+++..++.++.||+.||.|||+ .||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKE  298 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCT
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCcee
Confidence            999999999999999999988889999999999999999999998 999999999999999   7788999999999986


Q ss_pred             ccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          180 FEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       180 ~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .......        ...|||++.+ ..|+.++|+||+|+.+ .+.+.              ...+-...+..++...+.
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il-~ell~--------------g~~Pf~~~~~~~~~~~i~  362 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM-YEMMC--------------GRLPFYNQDHEKLFELIL  362 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHHH-HHHHH--------------SSCSSCCSSHHHHHHHHH
T ss_pred             ccCCCcccccccCCccccCHhhcCC-CCCCCccchhhhHHHH-HHHhh--------------CCCCCCCCCHHHHHHHHH
Confidence            4332211        1228998866 5688999999995544 33321              001111112222322222


Q ss_pred             h----cCCCCCHHHHHHHHHHHcCCCCCcc-----cHHHHHHH
Q 042392          252 K----VGSMLTEFDVKQLMEAADMDGNGAI-----DYTEFTAA  285 (436)
Q Consensus       252 ~----~~~~~s~~~i~~l~~~~d~d~~g~i-----~~~EF~~~  285 (436)
                      .    +....+.+-.+.+-+.+..|+..|+     +..|.+.+
T Consensus       363 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             hCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            2    1223444445555666788888888     77777654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.5e-34  Score=277.99  Aligned_cols=190  Identities=17%  Similarity=0.249  Sum_probs=162.5

Q ss_pred             ccccccccceeeeeeeccc--CCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           18 KPYEDVMLHYSFGRMLGRG--RFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      ++.....++|++.+.||+|  +||.||+|++..+++.||||++......  ......+.+|+.+++.+ +||||++++++
T Consensus        18 s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~   94 (389)
T 3gni_B           18 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLF-NHPNIVPYRAT   94 (389)
T ss_dssp             CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             hcccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhC-CCCCCCcEeEE
Confidence            3344456789999999999  9999999999999999999999765432  34566788999999999 69999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      +...+.+|+|||||++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~d  171 (389)
T 3gni_B           95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSG  171 (389)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECC
T ss_pred             EEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcc
Confidence            99999999999999999999999876  569999999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCC---------------CCCCChHHHHHH-HHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG---------------EASDDTSVILRM-KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~---------------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~  213 (436)
                      ||.+........               ....+||++.+. ..|+.++|+||+|+++
T Consensus       172 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il  227 (389)
T 3gni_B          172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA  227 (389)
T ss_dssp             GGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHH
T ss_pred             cccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHH
Confidence            999875532210               012389998764 4688999999996544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.2e-33  Score=266.15  Aligned_cols=247  Identities=19%  Similarity=0.190  Sum_probs=180.9

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      +...+....+|++.+.||+|+||.||+|++  +|..||||++......  ......+.+|+.+++.+ +||||+++++++
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~  103 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFH--AERVNEFLREVAIMKRL-RHPNIVLFMGAV  103 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCS--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCC--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            345566778999999999999999999986  5889999998765433  34456788999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEE
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      .....+|+||||+++|+|.+++...+.   +++..++.++.||+.||.|||+.|  |+||||||+||++   +.++.+||
T Consensus       104 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL  180 (309)
T 3p86_A          104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKV  180 (309)
T ss_dssp             CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEE
T ss_pred             EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEE
Confidence            999999999999999999999987553   899999999999999999999999  9999999999999   77889999


Q ss_pred             EecCCcccccccC--------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          172 TDFGSALLFEEEG--------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       172 ~DFG~a~~~~~~~--------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      +|||+|+......        .....+||.+.+ ..++.++|+||+|++++ +.+.              ...+-...+.
T Consensus       181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-ellt--------------g~~Pf~~~~~  244 (309)
T 3p86_A          181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD-EPSNEKSDVYSFGVILW-ELAT--------------LQQPWGNLNP  244 (309)
T ss_dssp             CCCC-----------------CCTTSCHHHHTT-CCCCTTHHHHHHHHHHH-HHHH--------------CCCTTTTSCH
T ss_pred             CCCCCCccccccccccccCCCCccccChhhhcC-CCCCchhhHHHHHHHHH-HHHh--------------CCCCCCCCCH
Confidence            9999997654321        112238888876 45788999999965543 2221              0111111223


Q ss_pred             HHHHHHHHh------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          244 DELRAGLTK------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       244 ~eL~~~l~~------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .++...+..      +....+.+-.+.+-+++..|+..|+++.+.+..+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~  294 (309)
T 3p86_A          245 AQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR  294 (309)
T ss_dssp             HHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            333332221      11233444344455567788888999998887654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=5.2e-34  Score=283.12  Aligned_cols=203  Identities=21%  Similarity=0.277  Sum_probs=161.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC--
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE--   99 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--   99 (436)
                      .+.++|++++.||+|+||.||+|.+..+++.||||++......  ......+.+|+.+++.+ +||||+++++++...  
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~  135 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--QTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKT  135 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGS--HHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCS
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccC--hHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCc
Confidence            4678999999999999999999999999999999999765322  34556788999999999 699999999999654  


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                          ..+|+||||+++ +|.+.+.  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus       136 ~~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG  209 (464)
T 3ttj_A          136 LEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFG  209 (464)
T ss_dssp             TTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCC
T ss_pred             cccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEE
Confidence                468999999976 6777764  348999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCC
Q 042392          176 SALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDT  235 (436)
Q Consensus       176 ~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~  235 (436)
                      +|+.......       ....|||++.+. .|+.++|+||+|+. +.+.+       +......+..++..+..
T Consensus       210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~i-l~ell~g~~pF~g~~~~~~~~~i~~~lg~  281 (464)
T 3ttj_A          210 LARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCI-MGEMVRHKILFPGRDYIDQWNKVIEQLGT  281 (464)
T ss_dssp             CC-----CCCC----CCCTTCCHHHHTTC-CCCTTHHHHHHHHH-HHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             eeeecCCCcccCCCcccccccCHHHHcCC-CCCHHHHHHHHHHH-HHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9987654321       123399998874 78899999999554 44432       33445556666655544

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=9e-34  Score=266.10  Aligned_cols=261  Identities=18%  Similarity=0.220  Sum_probs=190.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      +......+|++.+.||+|+||.||+|+    +..+++.||+|++.....   ......+.+|+.+++.+ +||||+++++
T Consensus        15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~   90 (302)
T 4e5w_A           15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNL-YHENIVKYKG   90 (302)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             hhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhC-CCCCeeeeee
Confidence            344456679999999999999999999    567899999999875432   22346788999999999 6999999999


Q ss_pred             eeecC--CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           95 AHEDE--TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        95 ~~~~~--~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      ++...  ..+|+||||+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||
T Consensus        91 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl  167 (302)
T 4e5w_A           91 ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKI  167 (302)
T ss_dssp             EEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEE
T ss_pred             EEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE---cCCCCEEE
Confidence            99876  6799999999999999999654 569999999999999999999999999999999999999   56789999


Q ss_pred             EecCCcccccccCC-------C----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCc
Q 042392          172 TDFGSALLFEEEGG-------E----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       172 ~DFG~a~~~~~~~~-------~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +|||+|........       .    ...+||.+.+ ..++.++|+||+|++++.-..+..........+...-.+..+.
T Consensus       168 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  246 (302)
T 4e5w_A          168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQ  246 (302)
T ss_dssp             CCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGG
T ss_pred             CcccccccccCCCcceeccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccc
Confidence            99999987654321       0    1238888876 4677899999995555433221111111111111111233445


Q ss_pred             cCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          241 LSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       241 i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .....+...+..-     ....+.+-.+.+-+++..|+..|+++.+.+..+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  298 (302)
T 4e5w_A          247 MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE  298 (302)
T ss_dssp             GHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            5555555554432     1233444455555667888899999999887653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.6e-34  Score=267.07  Aligned_cols=246  Identities=11%  Similarity=0.039  Sum_probs=185.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCC-------ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTN-------MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ...++|++.+.||+|+||.||+|++..++       ..||+|++....    ......+.+|+.+++.+ +||||+++++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~   79 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKL-SHKHLVLNYG   79 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTS-CCTTBCCEEE
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhC-CCCCEeEEEE
Confidence            45678999999999999999999998877       479999986543    23456789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc-----
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL-----  168 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~-----  168 (436)
                      ++...+..|+||||+++|+|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||+.   .++.     
T Consensus        80 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~~~~~  156 (289)
T 4fvq_A           80 VCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLI---REEDRKTGN  156 (289)
T ss_dssp             EECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---ECCBGGGTB
T ss_pred             EEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEe---cCCcccccc
Confidence            99999999999999999999999987654 99999999999999999999999999999999999994   3333     


Q ss_pred             ---EEEEecCCccccccc----CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          169 ---LKVTDFGSALLFEEE----GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       169 ---~kl~DFG~a~~~~~~----~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                         +||+|||++......    ......+||.+.+...++.++|+||+|++++ +.+..             ...+....
T Consensus       157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~-el~~g-------------~~~~~~~~  222 (289)
T 4fvq_A          157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLW-EICSG-------------GDKPLSAL  222 (289)
T ss_dssp             CCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHH-HHHTT-------------TCCTTTTS
T ss_pred             cceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHH-HHHcC-------------CCCCcccc
Confidence               999999999766432    1223459999987678899999999955543 33211             01111122


Q ss_pred             CHHHHHHHHHh---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          242 SYDELRAGLTK---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       242 ~~~eL~~~l~~---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ...........   +....+.+-.+.+-+++..|++.|+++.+.+..+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l  273 (289)
T 4fvq_A          223 DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL  273 (289)
T ss_dssp             CHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred             chHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            22222222222   1122222223444556677888899999988877544

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2e-34  Score=271.93  Aligned_cols=189  Identities=25%  Similarity=0.318  Sum_probs=158.4

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|++..+++.||||++....... ......+.+|+.+++.+ +||||+++++++..
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   83 (311)
T 3ork_A            6 TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD-PSFYLRFRREAQNAAAL-NHPAIVAVYDTGEA   83 (311)
T ss_dssp             CCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS-HHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEE
T ss_pred             CcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC-HHHHHHHHHHHHHHHcC-CCCCcceEEEeeec
Confidence            34567889999999999999999999999999999999997654333 34556788999999999 69999999999876


Q ss_pred             CC----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           99 ET----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        99 ~~----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ..    .+|+||||++|++|.+++...+++++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+||
T Consensus        84 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Df  160 (311)
T 3ork_A           84 ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDF  160 (311)
T ss_dssp             EETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCC
T ss_pred             cCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeec
Confidence            54    359999999999999999988889999999999999999999999999999999999999   67789999999


Q ss_pred             CCcccccccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|..+....           .....+||.+.+ ..++.++|+||+|+.+
T Consensus       161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l  209 (311)
T 3ork_A          161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVL  209 (311)
T ss_dssp             SCC------------------CCTTCCHHHHHT-CCCCHHHHHHHHHHHH
T ss_pred             cCcccccccccccccccccCcCcccCCHHHhcC-CCCCchHhHHHHHHHH
Confidence            9998764421           122338998876 4688899999996554

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=3.5e-34  Score=276.14  Aligned_cols=258  Identities=19%  Similarity=0.256  Sum_probs=178.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..-.+.++|++.+.||+|+||.||+|.+..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++..
T Consensus        23 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~   99 (367)
T 2fst_X           23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHM-KHENVIGLLDVFTP   99 (367)
T ss_dssp             EEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCCSEEECS
T ss_pred             cccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccC--HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEec
Confidence            3345678999999999999999999999999999999998654322  34456788999999999 69999999999865


Q ss_pred             C------CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 E------TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ~------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      .      ..+|+|||++ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+
T Consensus       100 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~  174 (367)
T 2fst_X          100 ARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKIL  174 (367)
T ss_dssp             CSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEEC
T ss_pred             CCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEe
Confidence            4      5689999999 6799998876 569999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccC-----CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC-
Q 042392          173 DFGSALLFEEEG-----GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG-  239 (436)
Q Consensus       173 DFG~a~~~~~~~-----~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g-  239 (436)
                      |||+|+......     .....+||++.+...|+.++|+||+|+ ++.+.+       +......+..++..+..++.. 
T Consensus       175 DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~-il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~  253 (367)
T 2fst_X          175 DFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC-IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL  253 (367)
T ss_dssp             C---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHH-HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             eccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHH-HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999998765432     122349999887667899999999954 444433       234455666666655543321 


Q ss_pred             --ccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 --TLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 --~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        .+........+..+.           ...+..-.+.+-+++..|++.|++..|.+.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence              122222233333322           1223444555566677788888888877654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=5e-34  Score=287.16  Aligned_cols=247  Identities=23%  Similarity=0.308  Sum_probs=187.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ....+|++.++||+|+||.||+|++..+|+.||||++.+..... ......+.+|+.+|+.+ +||||+++++++.+.+.
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~-~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~  258 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDA  258 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh-hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCE
Confidence            45578999999999999999999999999999999997643222 23345678999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +|+||||++||+|.+++...+.  +++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~  335 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVH  335 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEeccccee
Confidence            9999999999999999987544  9999999999999999999999999999999999999   7889999999999987


Q ss_pred             ccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          180 FEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       180 ~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      ......       ....|||++.+ ..|+.++|+||+|+.+ .+.+...      ..|   .. ........++...+..
T Consensus       336 ~~~~~~~~~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvil-yeLltG~------~PF---~~-~~~~~~~~~i~~~i~~  403 (576)
T 2acx_A          336 VPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLL-YEMIAGQ------SPF---QQ-RKKKIKREEVERLVKE  403 (576)
T ss_dssp             CCTTCCEECCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHH-HHHHHSS------CSS---SC-SSSCCCHHHHHHHHHH
T ss_pred             cccCccccccCCCccccCHHHHcC-CCCCccchHHHHHHHH-HHHHhCC------CCC---cc-cccchhHHHHHHHhhc
Confidence            654321       11228998876 4688999999995544 3332110      011   11 1112344555544443


Q ss_pred             cC----CCCCHHHHHHHHHHHcCCCCCcc-----cHHHHHHH
Q 042392          253 VG----SMLTEFDVKQLMEAADMDGNGAI-----DYTEFTAA  285 (436)
Q Consensus       253 ~~----~~~s~~~i~~l~~~~d~d~~g~i-----~~~EF~~~  285 (436)
                      ..    ..++.+-.+.+-+.+..|+..|+     +..|.+.+
T Consensus       404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            22    23444444555556677888887     56666543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3e-33  Score=265.05  Aligned_cols=190  Identities=29%  Similarity=0.428  Sum_probs=161.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ...+.++|++.+.||+|+||.||+|++..+|+.||+|++........  ......+.+|+.+++.+ +||||+++++++.
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   85 (321)
T 2a2a_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYE   85 (321)
T ss_dssp             CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence            34577889999999999999999999999999999999976543221  11356788999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC----cEEEEe
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA----LLKVTD  173 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~----~~kl~D  173 (436)
                      ....+|+||||+++++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||++   +.++    .+||+|
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~---~~~~~~~~~~kl~D  162 (321)
T 2a2a_A           86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML---LDKNIPIPHIKLID  162 (321)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---SCTTSSSCCEEECC
T ss_pred             cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEE---ecCCCCcCCEEEcc
Confidence            999999999999999999999888889999999999999999999999999999999999999   4444    799999


Q ss_pred             cCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          174 FGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       174 FG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||++.........       ...+||.+.+ ..++.++|+||+|+.++
T Consensus       163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~  209 (321)
T 2a2a_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY  209 (321)
T ss_dssp             CTTCEECCTTCCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHH
T ss_pred             CccceecCccccccccCCCCCccCcccccC-CCCCCccccHHHHHHHH
Confidence            9999876543221       1228888765 46788999999965543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.5e-33  Score=259.61  Aligned_cols=247  Identities=15%  Similarity=0.223  Sum_probs=183.7

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..++...++|++.+.||+|+||.||+|.+. ++..||+|++......     ...+.+|+.+++.+ +||||+++++++.
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~E~~~l~~l-~h~~i~~~~~~~~   89 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-----EDEFIEEAKVMMNL-SHEKLVQLYGVCT   89 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC-----HHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC-----HHHHHHHHHHHhcC-CCCCEeeEEEEEe
Confidence            456777789999999999999999999875 6778999999765432     35688999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ..+.+|+||||+++++|.+++.. ...+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~  166 (283)
T 3gen_A           90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL  166 (283)
T ss_dssp             SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTG
T ss_pred             cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEccccc
Confidence            99999999999999999999987 4569999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccC-----CC----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          177 ALLFEEEG-----GE----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       177 a~~~~~~~-----~~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +.......     ..    ...+||.+.+ ..++.++|+||+|+.++ +.++             ....+-...+..+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~-~l~t-------------~g~~p~~~~~~~~~~  231 (283)
T 3gen_A          167 SRYVLDDEYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMW-EIYS-------------LGKMPYERFTNSETA  231 (283)
T ss_dssp             GGGBCCHHHHSTTSTTSCGGGCCHHHHHH-CCCSHHHHHHHHHHHHH-HHHT-------------TTCCTTTTSCHHHHH
T ss_pred             cccccccccccccCCccCcccCCHHHhcc-CCCCchhhHHHHHHHHH-HHHh-------------CCCCCccccChhHHH
Confidence            98664321     11    1338888875 46889999999966553 2221             011111112222332


Q ss_pred             HHHHhc----C-CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          248 AGLTKV----G-SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       248 ~~l~~~----~-~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ..+..-    . ...+..-.+.+-+++..|++.|.++.+.+..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          232 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            222221    1 12233333444456778888899999988776543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.8e-33  Score=265.08  Aligned_cols=250  Identities=16%  Similarity=0.201  Sum_probs=187.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEEC-------CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTEN-------STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      .++...++|++.+.||+|+||.||+|++.       .++..||||++.....   ......+.+|+.+++.+.+||||++
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~  105 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIIN  105 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC---HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc---HHHHHHHHHHHHHHHHhhcCCCEee
Confidence            35666789999999999999999999986       4577899999875432   2345678899999999966999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCC
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKP  155 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp  155 (436)
                      +++++...+.+|+||||+++|+|.+++....                .+++..++.++.||+.||.|||+.||+||||||
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  185 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  185 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence            9999999999999999999999999998653                388999999999999999999999999999999


Q ss_pred             CcceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHH
Q 042392          156 ENFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQA  225 (436)
Q Consensus       156 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~  225 (436)
                      +||++   +.++.+||+|||++........          ....+||.+.+ ..++.++|+||+|++++ +.+.      
T Consensus       186 ~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt------  254 (334)
T 2pvf_A          186 RNVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMW-EIFT------  254 (334)
T ss_dssp             GGEEE---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHH-HHHT------
T ss_pred             ceEEE---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHH-HHHh------
Confidence            99999   7788999999999987654211          11238998876 46889999999965543 3221      


Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                             ....+-...+..++...+..-     ....+.+-...+-+++..|++.|+++.|.+..+...
T Consensus       255 -------~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          255 -------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             -------TSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -------CCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                   011111122334444333321     122344434445556778888999999998765433

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.7e-33  Score=261.18  Aligned_cols=244  Identities=25%  Similarity=0.361  Sum_probs=185.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|++.+.||+|+||.||+|.+..++..||+|++....... ......+.+|+.+++.+ +||||+++++++....
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   82 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK-AGVEHQLRREVEIQSHL-RHPNILRLYGYFHDAT   82 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-HTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch-hhHHHHHHHHHHHHHcC-CCCCCcchhheEecCC
Confidence            345678999999999999999999999999999999986543222 23356688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      ..|+||||+++++|.+++.....+++..++.++.||+.||.|||+.||+||||||+||++   +.++.++|+|||++...
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHA  159 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccC
Confidence            999999999999999999988889999999999999999999999999999999999999   77889999999998765


Q ss_pred             cccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC
Q 042392          181 EEEGG------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG  254 (436)
Q Consensus       181 ~~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~  254 (436)
                      .....      ....+||.+.+ ..++.++|+||+|+.++ +.+.              ...+-...+..+....+....
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~--------------g~~p~~~~~~~~~~~~~~~~~  223 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCY-EFLV--------------GKPPFEANTYQETYKRISRVE  223 (279)
T ss_dssp             --------CCCCTTCCHHHHTT-CCCCTTHHHHHHHHHHH-HHHH--------------SSCTTCCSSHHHHHHHHHHTC
T ss_pred             CcccccccCCCCCccCHhHhcc-CCCCccchhHhHHHHHH-HHHH--------------CCCCCCCCcHHHHHHHHHhCC
Confidence            43221      12238888765 46778999999965543 2221              011111122333333333221


Q ss_pred             ----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          255 ----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       255 ----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          ...+..-.+.+-+++..|+..|++..|.+.+
T Consensus       224 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                2233333444555677888899999988865

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.5e-33  Score=268.32  Aligned_cols=188  Identities=22%  Similarity=0.322  Sum_probs=158.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-...++|++.+.||+|+||.||+|++..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++...
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           20 YFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD--KMVKKIAMREIKLLKQL-RHENLVNLLEVCKKK   96 (331)
T ss_dssp             CCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEET
T ss_pred             hhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCc--hHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecC
Confidence            344678999999999999999999999999999999998765432  34456678999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||+++++|..++...+.+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++..
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFART  173 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC--
T ss_pred             CEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCcee
Confidence            9999999999998888887777789999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......        ....+||.+.+...++.++|+||+|+.+
T Consensus       174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il  215 (331)
T 4aaa_A          174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV  215 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred             ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHH
Confidence            543221        1223899987766788999999996554

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3.4e-33  Score=258.68  Aligned_cols=246  Identities=26%  Similarity=0.305  Sum_probs=186.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|.+..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++...
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   83 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS-LDVVGKIKREIQNLKLF-RHPHIIKLYQVISTP   83 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc-hhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecC
Confidence            3456689999999999999999999999999999999986542211 23345788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~  160 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNM  160 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGC
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccc
Confidence            9999999999999999999988889999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          180 FEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       180 ~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      ......       ....+||.+.+...++.++|+||+|+.++ +.+..              ..+-......++...+..
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~-~l~~g--------------~~p~~~~~~~~~~~~~~~  225 (276)
T 2h6d_A          161 MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY-ALLCG--------------TLPFDDEHVPTLFKKIRG  225 (276)
T ss_dssp             CCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHH-HHHHS--------------SCSSCCSSHHHHHHHHHH
T ss_pred             cCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHH-HHHhC--------------CCCCCCCcHHHHHHHhhc
Confidence            654321       12238888876544578999999965543 32210              001011122333332222


Q ss_pred             ----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 ----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          +....+.+-.+.+-+++..|++.|++..+.+.+
T Consensus       226 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          226 GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                122234444445556678888999999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-33  Score=272.54  Aligned_cols=186  Identities=25%  Similarity=0.404  Sum_probs=158.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....    ......+.+|+.+++.+ +||||+++++++....
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~  121 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKY  121 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCC
Confidence            456788999999999999999999999999999999987653    22345688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+.
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEeccccee
Confidence            9999999999999999987654 6999999999999999999999999999999999999942 2346899999999987


Q ss_pred             ccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ......       ....|||++.+ ..|+.++|+||+|+++
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  240 (387)
T 1kob_A          201 LNPDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLG  240 (387)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHH
T ss_pred             cCCCcceeeeccCCCccCchhccC-CCCCCcccEeeHhHHH
Confidence            654321       12238998875 4688899999996554

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=265.38  Aligned_cols=242  Identities=19%  Similarity=0.209  Sum_probs=178.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      +...+.++|++.+.||+|+||+||+|++..+++.||||++.......  .......+|+..+..+.+||||+++++++..
T Consensus        51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~  128 (311)
T 3p1a_A           51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP--KDRARKLAEVGSHEKVGQHPCCVRLEQAWEE  128 (311)
T ss_dssp             SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccCh--HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence            44556688999999999999999999999999999999986544332  3334455666666665479999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      .+.+|+||||+ +++|.+++...+ .+++..++.++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||+|
T Consensus       129 ~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a  204 (311)
T 3p1a_A          129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLL  204 (311)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTC
T ss_pred             CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceee
Confidence            99999999999 569999887754 59999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          178 LLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       178 ~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      .........       ...|||.+.+  .|+.++|+||+|+.++ +.+    .+........+..       +.... + 
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~-el~~g~~~~~~~~~~~~~~~-------~~~~~-~-  272 (311)
T 3p1a_A          205 VELGTAGAGEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTIL-EVACNMELPHGGEGWQQLRQ-------GYLPP-E-  272 (311)
T ss_dssp             EECC------CCCCCGGGCCGGGGGT--CCSTHHHHHHHHHHHH-HHHHTCCCCSSHHHHHHHTT-------TCCCH-H-
T ss_pred             eecccCCCCcccCCCccccCHhHhcC--CCCchhhHHHHHHHHH-HHHhCCCCCCCccHHHHHhc-------cCCCc-c-
Confidence            876543221       1238998765  6889999999966543 322    1111111111110       11111 0 


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          247 RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       247 ~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                            +....+.+-.+.+-+++..|++.|++..|.+.
T Consensus       273 ------~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          273 ------FTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                  11234444455566677888899999988775

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=6.6e-33  Score=259.62  Aligned_cols=248  Identities=21%  Similarity=0.278  Sum_probs=182.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|++..+++.||||++......      ..+.+|+.+++.+.+||||+++++++..
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~~~~l~~~~~i~~~~~~~~~   77 (298)
T 1csn_A            4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------PQLRDEYRTYKLLAGCTGIPNVYYFGQE   77 (298)
T ss_dssp             --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS------CCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred             cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc------HHHHHHHHHHHHHhcCCCCCeEEeecCC
Confidence            3456778899999999999999999999999999999998654322      2477899999999779999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc--CCCCcEEEEecC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR--DDNALLKVTDFG  175 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~--~~~~~~kl~DFG  175 (436)
                      ....|+||||+ +++|.+++...+ ++++..++.++.||+.||.|||++||+||||||+||++...  ...+.+||+|||
T Consensus        78 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           78 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            99999999999 889999998754 59999999999999999999999999999999999999422  122349999999


Q ss_pred             CcccccccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCc
Q 042392          176 SALLFEEEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       176 ~a~~~~~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      +|+.......               ....+||.+.+ ..++.++|+||+|++++ +.+...      ..|...+     .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~g~------~pf~~~~-----~  223 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFM-YFLRGS------LPWQGLK-----A  223 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHSS------CTTSSCC-----S
T ss_pred             cccccccccccccccccCccCCCCCcccCCchhhcC-CCCChHHHHHHHHHHHH-HHHcCC------CCcchhh-----c
Confidence            9987654321               11238888765 46789999999955543 322100      0111100     0


Q ss_pred             cCHHHHHHHH---------HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          241 LSYDELRAGL---------TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       241 i~~~eL~~~l---------~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+....+         ..+....+.+-.+.+-.++..|++.|+++.+.+..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l  278 (298)
T 1csn_A          224 ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF  278 (298)
T ss_dssp             CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred             cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence            1111111111         111223444444555566788899999998887654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=4.2e-33  Score=264.02  Aligned_cols=252  Identities=15%  Similarity=0.166  Sum_probs=191.0

Q ss_pred             ccccccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCee
Q 042392           16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV   90 (436)
Q Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv   90 (436)
                      .+..++...++|++.+.||+|+||.||+|++.     .+++.||||++.....   ......+.+|+.+++.+ +||||+
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~   91 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS---MRERIEFLNEASVMKEF-NCHHVV   91 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC---HHHHHHHHHHHHHGGGC-CCTTBC
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC---HHHHHHHHHHHHHHHhc-CCCCEe
Confidence            35677888899999999999999999999876     4578999999875432   23445688999999999 699999


Q ss_pred             eceeeeecCCeEEEEEeccCCCChHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCccee
Q 042392           91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK----------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCF  160 (436)
Q Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill  160 (436)
                      ++++++...+..|+||||+++|+|.+++...          ..+++..++.++.||+.||.|||++||+||||||+||++
T Consensus        92 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli  171 (322)
T 1p4o_A           92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV  171 (322)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE
T ss_pred             eeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE
Confidence            9999999999999999999999999999763          346899999999999999999999999999999999999


Q ss_pred             eccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHh
Q 042392          161 ISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKF  230 (436)
Q Consensus       161 ~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F  230 (436)
                         +.++.+||+|||++........          ....+||.+.+ ..++.++|+||+|++++ +.+.           
T Consensus       172 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~-----------  235 (322)
T 1p4o_A          172 ---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLW-EIAT-----------  235 (322)
T ss_dssp             ---CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHH-----------
T ss_pred             ---cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHH-HHHh-----------
Confidence               7788999999999986643221          11338998875 46788999999965543 2221           


Q ss_pred             hhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          231 IEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       231 ~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                        ....+-...+..++...+..-     ....+..-.+.+-+++..|++.|+++.|.+..+...
T Consensus       236 --~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          236 --LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             --TSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             --cCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence              011111122333333333221     123344334445556788889999999998876543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.8e-33  Score=256.80  Aligned_cols=244  Identities=16%  Similarity=0.206  Sum_probs=183.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      +....++|++.+.||+|+||.||+|.+. +++.||+|++......     ...+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   77 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-----EEDFIEEAEVMMKL-SHPKLVQLYGVCLEQ   77 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC-----HHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred             EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC-----HHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence            4455678999999999999999999986 5778999999765432     35688999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+||||+++++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+|.
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~  154 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTR  154 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGG
T ss_pred             CceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEeccccccc
Confidence            9999999999999999999764 458999999999999999999999999999999999999   677899999999998


Q ss_pred             cccccC-----CC----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          179 LFEEEG-----GE----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       179 ~~~~~~-----~~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......     ..    ...+||.+.+ ..++.++|+||+|++++ +.++.             ...+-...+..++...
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-~ll~~-------------g~~p~~~~~~~~~~~~  219 (269)
T 4hcu_A          155 FVLDDQYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMW-EVFSE-------------GKIPYENRSNSEVVED  219 (269)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------SCCTTTTCCHHHHHHH
T ss_pred             cccccccccccCcccccccCCHHHhcC-CCCCchhhhHHHHHHHH-HHhcC-------------CCCCCCCCCHHHHHHH
Confidence            654321     11    1338888865 46889999999966553 22210             0111111223333332


Q ss_pred             HHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          250 LTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       250 l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +..-     ....+..-.+.+-+++..|+..|+++.+.+..+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          220 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            2221     11223333444555678888889999988877643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.2e-32  Score=259.49  Aligned_cols=250  Identities=20%  Similarity=0.252  Sum_probs=180.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|.+..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~  105 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD-AKARADCIKEIDLLKQL-NHPNVIKYYASFIEDN  105 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETT
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC-HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCC
Confidence            446678999999999999999999999999999999997643332 34556788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          101 AVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .+|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~  182 (310)
T 2wqm_A          106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGL  182 (310)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC--
T ss_pred             cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccc
Confidence            99999999999999999875    3458999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          177 ALLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       177 a~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      +........        ....+||.+.+ ..++.++|+||+|+.++ +.+...            -..........++..
T Consensus       183 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~-~l~~g~------------~p~~~~~~~~~~~~~  248 (310)
T 2wqm_A          183 GRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLY-EMAALQ------------SPFYGDKMNLYSLCK  248 (310)
T ss_dssp             ----------------CCSSCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHSS------------CTTC---CCHHHHHH
T ss_pred             eeeecCCCccccccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHH-HHHhCC------------CCCcccchhHHHHHH
Confidence            987654321        12338888765 46788999999965543 322100            000111122333333


Q ss_pred             HHHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          249 GLTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       249 ~l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      .+....      ...+.+-.+.+-+++..|.+.|+++.+.+..+...
T Consensus       249 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          249 KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             HHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            333221      12333333445556788899999999988776543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-34  Score=276.99  Aligned_cols=251  Identities=23%  Similarity=0.341  Sum_probs=183.2

Q ss_pred             cccccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..-.++|++.+.||+|+||.||+|++.   .+++.||||++..............+.+|+.+++.+.+||||+++++++.
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  129 (355)
T 1vzo_A           50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ  129 (355)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence            344578999999999999999999984   58999999998754322111223456689999999866999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ....+|+||||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus       130 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          130 TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLS  206 (355)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEE
T ss_pred             eCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCC
Confidence            999999999999999999999988889999999999999999999999999999999999999   77889999999999


Q ss_pred             cccccc---------CCCCCCChHHHHH-HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEE---------GGEASDDTSVILR-MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~---------~~~~~~~pe~~~~-~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +.+...         ......+||.+.+ ...++.++|+||+|+.+ .+.+...      ..|   .... ......++.
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il-~ell~g~------~pf---~~~~-~~~~~~~~~  275 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM-YELLTGA------SPF---TVDG-EKNSQAEIS  275 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH-HHHHHSS------CTT---SCTT-SCCCHHHHH
T ss_pred             eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHH-HHHHHCC------CCC---ccCC-ccchHHHHH
Confidence            865332         1222348999875 34578899999995544 3332110      011   1111 112233333


Q ss_pred             HHHHhc----CCCCCHHHHHHHHHHHcCCCCCcc-----cHHHHHHH
Q 042392          248 AGLTKV----GSMLTEFDVKQLMEAADMDGNGAI-----DYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~----~~~~s~~~i~~l~~~~d~d~~g~i-----~~~EF~~~  285 (436)
                      ..+...    ....+..-.+.+-+++..|+..|+     +..|.+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          276 RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            332221    223344444455566778888888     66776654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-33  Score=273.28  Aligned_cols=189  Identities=24%  Similarity=0.356  Sum_probs=158.4

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|++..+|+.||||++......   .....+.+|+.+++.+ +||||+++++++....
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT   80 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc---chHHHHHHHHHHHHhc-CCCCCCeEEEeeccCC
Confidence            45667899999999999999999999999999999999754322   2345678999999999 6999999999988654


Q ss_pred             --eEEEEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec-cCCCCcEEEEec
Q 042392          101 --AVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS-RDDNALLKVTDF  174 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~-~~~~~~~kl~DF  174 (436)
                        .+|+|||||++|+|.+++.....   +++..++.++.||+.||.|||++||+||||||+|||+.. .+..+.+||+||
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DF  160 (396)
T 4eut_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (396)
T ss_dssp             TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred             CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecC
Confidence              78999999999999999976433   899999999999999999999999999999999999732 245567999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHH-------HHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRM-------KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~-------~~~~~~~d~~s~~~~~  213 (436)
                      |+|+.......       ....+||.+.+.       ..|+.++|+||+|+++
T Consensus       161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il  213 (396)
T 4eut_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF  213 (396)
T ss_dssp             GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHH
Confidence            99987654322       223399998763       6899999999996554

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-33  Score=267.61  Aligned_cols=251  Identities=18%  Similarity=0.198  Sum_probs=186.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .++...++|++.+.||+|+||.||+|++.     .++..||||++.....   ......+.+|+.+++.+.+||||++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~  115 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLL  115 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC---HHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            46667789999999999999999999973     4567899999975432   233457889999999995699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG-----------------------YYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      +++...+.+|+||||+++|+|.+++....                       .+++..++.++.||+.||.|||++||+|
T Consensus       116 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  195 (344)
T 1rjb_A          116 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  195 (344)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            99999999999999999999999998653                       2789999999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-  219 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-  219 (436)
                      |||||+||++   +.++.+||+|||+|.........          ...+||.+.+ ..|+.++|+||+|+++ .+.++ 
T Consensus       196 ~Dikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il-~el~t~  270 (344)
T 1rjb_A          196 RDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILL-WEIFSL  270 (344)
T ss_dssp             TTCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHTTT
T ss_pred             CCCChhhEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHH-HHHHcC
Confidence            9999999999   67789999999999876543221          1348998876 4688999999995544 34332 


Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      ..             .+-.+.-....+...+..-     ....+.+-...+-+++..|++.|+++.+.+..+....
T Consensus       271 g~-------------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          271 GV-------------NPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             SC-------------CSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CC-------------CCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            11             0001111112222222221     1223444444555567888999999999988775543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-33  Score=266.35  Aligned_cols=247  Identities=15%  Similarity=0.119  Sum_probs=186.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .+...++|++.+.||+|+||.||+|++.     .+++.||||++.....   ......+.+|+.+++.+ +||||+++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~hp~iv~~~~  117 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEF-DNPNIVKLLG  117 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC---HHHHHHHHHHHHHHHhC-CCCCEEEEEE
Confidence            3556789999999999999999999987     3558999999875432   33456789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAK------------------------GYYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      ++...+.+|+||||+++|+|.+++...                        ..+++..++.++.||+.||.|||++||+|
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH  197 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  197 (343)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            999999999999999999999999874                        46899999999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG  220 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~  220 (436)
                      |||||+||++   +.++.+||+|||++........          ....+||.+.+ ..|+.++|+||+|+.++ +.++ 
T Consensus       198 ~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~t-  271 (343)
T 1luf_A          198 RDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLW-EIFS-  271 (343)
T ss_dssp             SCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-
T ss_pred             CCCCcceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc-CCcCcccccHHHHHHHH-HHHh-
Confidence            9999999999   6778999999999986543211          11238998875 46889999999955543 3221 


Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                                  ....+-...+..++...+..-     ....+..-.+.+-+++..|++.|+++.+++..+..
T Consensus       272 ------------~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~  332 (343)
T 1luf_A          272 ------------YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR  332 (343)
T ss_dssp             ------------TTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------------cCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHH
Confidence                        001111112333333333221     12233333444555667888889999888876643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.3e-33  Score=292.20  Aligned_cols=237  Identities=22%  Similarity=0.263  Sum_probs=181.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|+++++||+|+||.||+|+++.+++.||||++.+..... ......+.+|..++..+.+||||+++++++.+.+.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            4568999999999999999999999999999999997643221 223456788999999887799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||++||+|..++...+.+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+....
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCC
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeecccc
Confidence            9999999999999999998899999999999999999999999999999999999999   7889999999999986432


Q ss_pred             cCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh--
Q 042392          183 EGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--  252 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~--  252 (436)
                      ...        ....|||++.+ ..|+.++|+||+|+.+ .+++..              ..+-...+..++...+..  
T Consensus       495 ~~~~~~~~~GT~~Y~APE~l~~-~~~~~~~DvwSlGvil-yelltG--------------~~Pf~~~~~~~~~~~i~~~~  558 (674)
T 3pfq_A          495 DGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLL-YEMLAG--------------QAPFEGEDEDELFQSIMEHN  558 (674)
T ss_dssp             TTCCBCCCCSCSSSCCHHHHTC-CCBSTHHHHHHHHHHH-HHHHHS--------------SCSSCCSSHHHHHHHHHSSC
T ss_pred             CCcccccccCCCcccCHhhhcC-CCCCccceEechHHHH-HHHHcC--------------CCCCCCCCHHHHHHHHHhCC
Confidence            221        12238998865 5789999999995544 333310              000001122223222222  


Q ss_pred             --cCCCCCHHHHHHHHHHHcCCCCCcccH
Q 042392          253 --VGSMLTEFDVKQLMEAADMDGNGAIDY  279 (436)
Q Consensus       253 --~~~~~s~~~i~~l~~~~d~d~~g~i~~  279 (436)
                        +...++.+-.+.+-+.+..|+..|++.
T Consensus       559 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          559 VAYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence              123345555555556677788888876

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=266.24  Aligned_cols=259  Identities=18%  Similarity=0.222  Sum_probs=185.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcC--CCCCeeeceeeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLS--GQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~   97 (436)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||++....... .......+.+|+.+++.+.  +||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            456789999999999999999999999999999999987543211 0112235667887777663  4999999999998


Q ss_pred             cCC-----eEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           98 DET-----AVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        98 ~~~-----~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      ...     .+++||||+.+ +|.+++.....  +++..++.++.||+.||.|||++||+||||||+||++   +.++.+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~k  160 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVK  160 (308)
T ss_dssp             ECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEE
T ss_pred             ccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEE
Confidence            755     58999999975 99999987654  8999999999999999999999999999999999999   7788999


Q ss_pred             EEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCC
Q 042392          171 VTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTD  236 (436)
Q Consensus       171 l~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~  236 (436)
                      |+|||+|+.......       ....+||.+.+ ..|+.++|+||+| +++.+.+       +......+..++..+...
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG-~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  238 (308)
T 3g33_A          161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVG-CIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP  238 (308)
T ss_dssp             ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHH-HHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             EeeCccccccCCCcccCCccccccccCchHHcC-CCCCchHHHHHHH-HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            999999987654322       12338998876 4688999999995 4555554       223344455555544333


Q ss_pred             CCCccCH------HHH----HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          237 KNGTLSY------DEL----RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       237 ~~g~i~~------~eL----~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +......      ..+    ...+.......+.+-.+.+.+++..|+..|++..|.+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            2211000      000    000011223455555666777788899999999887753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.3e-33  Score=261.16  Aligned_cols=251  Identities=18%  Similarity=0.201  Sum_probs=189.7

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEE-----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTE-----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      ..++....+|++.+.||+|+||.||+|++     ..+++.||||++.....   ......+.+|+.+++.+.+||||+++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~   92 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHMNIVNL   92 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---HHHHHHHHHHHHHHhhcccCCCeeeE
Confidence            45667778999999999999999999985     45678999999975532   23456789999999999669999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCC
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAKG------------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLK  154 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlk  154 (436)
                      ++++...+..|+||||+++|+|.+++....                  .+++..++.++.||+.||.|||++||+|||||
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  172 (313)
T 1t46_A           93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (313)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            999999999999999999999999998754                  38999999999999999999999999999999


Q ss_pred             CCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhH
Q 042392          155 PENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEET  223 (436)
Q Consensus       155 p~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~  223 (436)
                      |+||++   +.++.+||+|||++.........          ...+||.+.+ ..++.++|+||+|+.++ +.++ ..  
T Consensus       173 p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt~g~--  245 (313)
T 1t46_A          173 ARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLW-ELFSLGS--  245 (313)
T ss_dssp             GGGEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTTTC--
T ss_pred             cceEEE---cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHH-HHHhCCC--
Confidence            999999   67789999999999876543221          1338998876 46889999999955543 3321 10  


Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                                 .+-.+......+...+...     ....+..-.+.+-+++..|+..|+++.|.+..+...
T Consensus       246 -----------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          246 -----------SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             -----------CSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----------CCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence                       0011111112222222221     122333334445556778889999999998776443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-33  Score=270.77  Aligned_cols=184  Identities=21%  Similarity=0.272  Sum_probs=151.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .-.+.++|++.+.||+|+||.||+|.+..+++.||||++......  ......+.+|+.+++.+ +||||+++++++...
T Consensus        20 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   96 (371)
T 2xrw_A           20 TFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN--QTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQ   96 (371)
T ss_dssp             EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSC
T ss_pred             ccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCC--hHHHHHHHHHHHHHHhc-CCCCccceEEeeccc
Confidence            345678999999999999999999999999999999999765332  34456788999999999 699999999999766


Q ss_pred             C------eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392          100 T------AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus       100 ~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      .      .+|+|||||++ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        97 ~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~D  170 (371)
T 2xrw_A           97 KSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILD  170 (371)
T ss_dssp             CSTTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECC
T ss_pred             cccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEE
Confidence            4      78999999975 8888885  458999999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          174 FGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       174 FG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|+.......       ....|||++.+ ..|+.++|+||+|+++
T Consensus       171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  216 (371)
T 2xrw_A          171 FGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  216 (371)
T ss_dssp             CCC----------------CTTCCHHHHTT-CCCCTTHHHHHHHHHH
T ss_pred             eecccccccccccCCceecCCccCHHHhcC-CCCCchHhHHHHHHHH
Confidence            999987654321       12338998876 4688999999996554

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.7e-33  Score=279.51  Aligned_cols=247  Identities=17%  Similarity=0.182  Sum_probs=189.4

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .++....+|++.+.||+|+||.||+|++..++..||||++.....     ....+.+|+.+|+.+ +||||+++++++..
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~  287 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR  287 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhc-CCCCEeeEEEEEec
Confidence            466677889999999999999999999998999999999875432     245688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ...+|+||||+++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+
T Consensus       288 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~  364 (495)
T 1opk_A          288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGL  364 (495)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTC
T ss_pred             CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeeccc
Confidence            99999999999999999999874  348999999999999999999999999999999999999   6778999999999


Q ss_pred             cccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          177 ALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       177 a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |+........         ...|||.+.+ ..|+.++|+||+|+.++ +.++             ....+-...+..++.
T Consensus       365 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~-el~t-------------~g~~p~~~~~~~~~~  429 (495)
T 1opk_A          365 SRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLW-EIAT-------------YGMSPYPGIDLSQVY  429 (495)
T ss_dssp             EECCTTCCEECCTTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHH-HHHT-------------TSCCSSTTCCGGGHH
T ss_pred             ceeccCCceeecCCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHHH-HHHh-------------CCCCCCCCCCHHHHH
Confidence            9876432211         1238998875 56889999999955543 3321             000111111222222


Q ss_pred             HHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          248 AGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       248 ~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ..+.. .    ....+.+-.+.+.+++..|++.|+++.+.+..+...
T Consensus       430 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          430 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            22222 1    122334444555566788889999999998776543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.1e-33  Score=263.81  Aligned_cols=247  Identities=15%  Similarity=0.182  Sum_probs=186.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .++....+|++.+.||+|+||.||+|.+.     .++..||||++.....   ......+.+|+.+++.+ +||||++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~hp~iv~~~   92 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS---PSELRDLLSEFNVLKQV-NHPHVIKLY   92 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC---HHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhC-CCCceeeEE
Confidence            34566789999999999999999999983     4568999999875432   34456788999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCcc
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKGY------------------------YSERDAAPVLRAIVNAVNVCHSMGVM  149 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~------------------------~~~~~~~~~~~qi~~~l~~lH~~~i~  149 (436)
                      +++...+.+|+||||+++++|.+++.....                        +++..++.++.||+.||.|||++||+
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  172 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV  172 (314)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999999999999999987543                        78999999999999999999999999


Q ss_pred             cccCCCCcceeeccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC
Q 042392          150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP  219 (436)
Q Consensus       150 Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~  219 (436)
                      ||||||+||++   +.++.+||+|||++........          ....+||.+.+ ..++.++|+||+|+.++ +.++
T Consensus       173 H~dikp~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~t  247 (314)
T 2ivs_A          173 HRDLAARNILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLW-EIVT  247 (314)
T ss_dssp             CCCCSGGGEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHH-HHHT
T ss_pred             ccccchheEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHH-HHHh
Confidence            99999999999   6778999999999987643211          11238998876 46889999999965543 3221


Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .             ...+-...+..++...+..     .....+.+-.+.+.+++..|++.|+++.|.+..+.
T Consensus       248 ~-------------g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~  307 (314)
T 2ivs_A          248 L-------------GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE  307 (314)
T ss_dssp             T-------------SCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             C-------------CCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            0             0000001112222222222     11234444455566667888899999999887654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=6.7e-33  Score=255.59  Aligned_cols=244  Identities=15%  Similarity=0.164  Sum_probs=183.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|++.+.||+|+||.||+|.+. ++..||+|++......     ...+.+|+.+++.+ +||||+++++++...+
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   76 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS-----EDEFFQEAQTMMKL-SHPKLVKFYGVCSKEY   76 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC-----HHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc-----HHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence            445678999999999999999999875 5778999999765432     35688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++++|.+++...+ .+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+|..
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A           77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRY  153 (268)
T ss_dssp             SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEE
T ss_pred             ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCcccee
Confidence            9999999999999999998764 49999999999999999999999999999999999999   7788999999999986


Q ss_pred             ccccCC-----C----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          180 FEEEGG-----E----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       180 ~~~~~~-----~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ......     .    ...+||.+.+ ..++.++|+||+|+.++ +.++             ....+-...+..+....+
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~-------------~g~~p~~~~~~~~~~~~~  218 (268)
T 3sxs_A          154 VLDDQYVSSVGTKFPVKWSAPEVFHY-FKYSSKSDVWAFGILMW-EVFS-------------LGKMPYDLYTNSEVVLKV  218 (268)
T ss_dssp             CCTTCEEECCSCCCCGGGCCHHHHHH-SEEETTHHHHHHHHHHH-HHHT-------------TTCCTTTTSCHHHHHHHH
T ss_pred             cchhhhhcccCCCcCcccCCHHHHhc-cCCchhhhhHHHHHHHH-HHHc-------------CCCCCccccChHHHHHHH
Confidence            644221     1    1338888865 46888999999965543 3221             001111112222222222


Q ss_pred             Hh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          251 TK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       251 ~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      .. .    ....+..-.+.+-+++..|++.|+++.|.+..+...
T Consensus       219 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          219 SQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             HTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            21 1    111233333344456678888899999988876543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=9.9e-33  Score=263.00  Aligned_cols=244  Identities=23%  Similarity=0.299  Sum_probs=187.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|.+.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  114 (335)
T 2owb_A           37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSL-AHQHVVGFHGFFEDND  114 (335)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred             cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC-HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence            345678999999999999999999999999999999997654333 34556788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceec
Confidence            999999999999999999888889999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .....        ....+||.+.+ ..++.++|+|++|+.++ +.+..              ..+-......+....+..
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g--------------~~pf~~~~~~~~~~~~~~  255 (335)
T 2owb_A          192 EYDGERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMY-TLLVG--------------KPPFETSCLKETYLRIKK  255 (335)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHH-HHHHS--------------SCTTCCSSHHHHHHHHHH
T ss_pred             ccCcccccccCCCccccCHHHhcc-CCCCchhhHHHHHHHHH-HHHHC--------------cCCCCCCCHHHHHHHHhc
Confidence            43221        12338998876 45788999999965543 32210              000011112222221211


Q ss_pred             ----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 ----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          +....+..-.+.+-+++..|.+.|+++.|.+..
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          256 NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                112333333444555677888889999888754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1e-32  Score=265.53  Aligned_cols=190  Identities=22%  Similarity=0.268  Sum_probs=160.3

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC----CCCCeeec
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS----GQPNIVEL   92 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~   92 (436)
                      ......+.++|++.+.||+|+||.||+|++..+++.||||++...     ........+|+.+++.+.    +||||+++
T Consensus        27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            355677889999999999999999999999999999999998643     233456778999999984    49999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-------
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-------  163 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-------  163 (436)
                      ++++...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+...       
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence            99999999999999999 889999998764  49999999999999999999999999999999999999421       


Q ss_pred             ---------------CCCCcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          164 ---------------DDNALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       164 ---------------~~~~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                                     ...+.+||+|||+|..........     ..|||++.+ ..|+.++|+||+|+++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  249 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVL  249 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHH
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcC-CCCCCccchHHHHHHH
Confidence                           126789999999998755432221     228998876 4688999999996554

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.1e-33  Score=262.00  Aligned_cols=249  Identities=20%  Similarity=0.229  Sum_probs=178.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~  106 (309)
T 2h34_A           29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD-PVFRTRMQREARTAGRL-QEPHVVPIHDFGEID  106 (309)
T ss_dssp             -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEET
T ss_pred             CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC-HHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeC
Confidence            4456688999999999999999999999999999999987654332 34456788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||+++++|.+++...+++++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++..
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~  183 (309)
T 2h34_A          107 GQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASA  183 (309)
T ss_dssp             TEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC---
T ss_pred             CeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCcc
Confidence            9999999999999999999988889999999999999999999999999999999999999   6788999999999987


Q ss_pred             ccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          180 FEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       180 ~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      .......         ...+||.+.+ ..++.++|+||+|+.++ +.+..              ..+-...+...+...+
T Consensus       184 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g--------------~~pf~~~~~~~~~~~~  247 (309)
T 2h34_A          184 TTDEKLTQLGNTVGTLYYMAPERFSE-SHATYRADIYALTCVLY-ECLTG--------------SPPYQGDQLSVMGAHI  247 (309)
T ss_dssp             -------------CCGGGCCGGGTCC-----CCCHHHHHHHHHH-HHHHS--------------SCSSCSCHHHHHHHHH
T ss_pred             ccccccccccccCCCcCccCHHHHcC-CCCCchHhHHHHHHHHH-HHHHC--------------CCCCCCchHHHHHHHh
Confidence            6543211         1238888765 56888999999965543 32210              0000001111222222


Q ss_pred             Hh-------cCCCCCHHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhh
Q 042392          251 TK-------VGSMLTEFDVKQLMEAADMDGNGAI-DYTEFTAATIQR  289 (436)
Q Consensus       251 ~~-------~~~~~s~~~i~~l~~~~d~d~~g~i-~~~EF~~~~~~~  289 (436)
                      ..       .....+.+-.+.+-+++..|++.|+ +.++++..+...
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          248 NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             HSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             ccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence            21       1122333333445556777888888 888888766533

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.1e-34  Score=287.89  Aligned_cols=242  Identities=23%  Similarity=0.288  Sum_probs=183.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.++||+|+||.||+|+++.+|+.||||++.+..... ......+.+|+.+++.+ +||||+++++++.....
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~-~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~  259 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK-RKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTD  259 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh-hHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCE
Confidence            34578999999999999999999999999999999997643222 22345688999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          102 VHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      +|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla  336 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLA  336 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTC
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeeccee
Confidence            99999999999999999764    359999999999999999999999999999999999999   78899999999999


Q ss_pred             ccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          178 LLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       178 ~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      +.+.....        ....|||++.+ ..|+.++|+||+|+.+ .+.+...      ..|   ... .......++...
T Consensus       337 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvil-yelltG~------~PF---~~~-~~~~~~~~~~~~  404 (543)
T 3c4z_A          337 VELKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTL-YEMIAAR------GPF---RAR-GEKVENKELKQR  404 (543)
T ss_dssp             EECCTTCCCBCCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS------CSS---CCT-TCCCCHHHHHHH
T ss_pred             eeccCCCcccccccCCccccChhhhcC-CCCChHHhcCcchHHH-HHHHhCC------CCC---CCC-ccchhHHHHHHH
Confidence            87654321        12238998876 5788999999995544 3333110      011   111 112334444443


Q ss_pred             HHh----cCCCCCHHHHHHHHHHHcCCCCCcccHH
Q 042392          250 LTK----VGSMLTEFDVKQLMEAADMDGNGAIDYT  280 (436)
Q Consensus       250 l~~----~~~~~s~~~i~~l~~~~d~d~~g~i~~~  280 (436)
                      +..    +...++..-.+.+-+.+..|+..|+++.
T Consensus       405 i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             HhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence            332    1223444444455556677888888663

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=3.1e-33  Score=264.10  Aligned_cols=259  Identities=18%  Similarity=0.215  Sum_probs=193.2

Q ss_pred             ccccccccccccccccceeeeeeecccCCeEEEEEEE-----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC
Q 042392           10 RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTE-----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS   84 (436)
Q Consensus        10 ~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   84 (436)
                      ..++|.....++...++|++.+.||+|+||.||+|.+     ..+++.||||++.....   ......+.+|+.+++.+.
T Consensus        12 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~   88 (316)
T 2xir_A           12 CERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIG   88 (316)
T ss_dssp             GGGSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHC
T ss_pred             hhhccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC---cHHHHHHHHHHHHHHhcc
Confidence            3456666667788889999999999999999999985     35678999999976532   234457889999999996


Q ss_pred             CCCCeeeceeeeecCC-eEEEEEeccCCCChHHHHHHcCC----------------CCHHHHHHHHHHHHHHHHHHHHcC
Q 042392           85 GQPNIVELKSAHEDET-AVHVVMELCQGGDLFDRIIAKGY----------------YSERDAAPVLRAIVNAVNVCHSMG  147 (436)
Q Consensus        85 ~h~niv~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~qi~~~l~~lH~~~  147 (436)
                      +||||+++++++...+ .+|+||||+++|+|.+++.....                +++..++.++.|++.||.|||+.|
T Consensus        89 ~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  168 (316)
T 2xir_A           89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  168 (316)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6999999999987654 59999999999999999987543                789999999999999999999999


Q ss_pred             cccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhc
Q 042392          148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEY  217 (436)
Q Consensus       148 i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~  217 (436)
                      |+||||||+||++   +.++.+||+|||+++........          ...+||.+.+ ..++.++|+||+|+.++ +.
T Consensus       169 i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l  243 (316)
T 2xir_A          169 CIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW-EI  243 (316)
T ss_dssp             CCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HH
T ss_pred             cccccCccceEEE---CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHH-HH
Confidence            9999999999999   67789999999999876432211          1338998875 46889999999965543 32


Q ss_pred             CC-hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          218 LP-GEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       218 l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++ ..             .+-.+.-...++...+..     .....+.+-.+.+.+++..|+..|+++.|.+..+...
T Consensus       244 ~t~g~-------------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          244 FSLGA-------------SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             HTTSC-------------CSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhCCC-------------CCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            21 00             001111111222222222     1122344444555666788899999999998876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.8e-33  Score=259.30  Aligned_cols=248  Identities=17%  Similarity=0.183  Sum_probs=189.4

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..++....+|++.+.||+|+||.||+|.+..++..||+|++....     .....+.+|+.+++.+ +||||+++++++.
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   79 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCT   79 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEc
Confidence            356677889999999999999999999999999999999987543     2346788999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      ..+.+|+||||+++++|.+++....  .+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg  156 (288)
T 3kfa_A           80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFG  156 (288)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCC
T ss_pred             cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCc
Confidence            9999999999999999999998743  48999999999999999999999999999999999999   677899999999


Q ss_pred             CcccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          176 SALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       176 ~a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      +|.........         ...+||.+.+ ..++.++|+||+|+.++ +.+.             ....+-...+..++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~ll~-------------~g~~p~~~~~~~~~  221 (288)
T 3kfa_A          157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLW-EIAT-------------YGMSPYPGIDLSQV  221 (288)
T ss_dssp             GGGTSCSSSSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCSSTTCCGGGH
T ss_pred             cceeccCCccccccCCccccCcCChhhhcc-CCCCchhhHHHHHHHHH-HHHh-------------CCCCCCCCCCHHHH
Confidence            99876543211         1338888865 46889999999966553 2221             00111111122222


Q ss_pred             HHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          247 RAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       247 ~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ...+...     ....+..-.+.+-+++..|+..|+++.+.+..+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence            2222221     122333334445556778888999999998776543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.9e-34  Score=274.74  Aligned_cols=244  Identities=20%  Similarity=0.209  Sum_probs=184.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----hhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----AENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      ...+..+|++.+.||+|+||.||+|++..+++.||||++........    ......+.+|+.+++.+ +||||++++++
T Consensus        19 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~   97 (335)
T 3dls_A           19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDI   97 (335)
T ss_dssp             TTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEE
T ss_pred             CcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            34567899999999999999999999999999999999987542210    01223467899999999 69999999999


Q ss_pred             eecCCeEEEEEeccCCC-ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           96 HEDETAVHVVMELCQGG-DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      +...+.+|+||||+.+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        98 ~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Df  174 (335)
T 3dls_A           98 FENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDF  174 (335)
T ss_dssp             EECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCC
T ss_pred             EeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeec
Confidence            99999999999999776 999999988889999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      |++........       ....+||.+.+...++.++|+||+|+.++ +.+ +......+......       .      
T Consensus       175 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~-el~~g~~pf~~~~~~~~~-------~------  240 (335)
T 3dls_A          175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLY-TLVFEENPFCELEETVEA-------A------  240 (335)
T ss_dssp             TTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHH-HHHHSSCSCSSGGGGTTT-------C------
T ss_pred             ccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHH-HHHhCCCchhhHHHHHhh-------c------
Confidence            99987654322       12238999887555588999999965543 322 11000000000000       0      


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          247 RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       247 ~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          .......+.+-.+.+-+++..|+..|++..+.+..
T Consensus       241 ----~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          241 ----IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ----cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                00111234444444555678888889999888865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4.5e-33  Score=268.98  Aligned_cols=243  Identities=24%  Similarity=0.321  Sum_probs=176.8

Q ss_pred             ccccceee--eeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           22 DVMLHYSF--GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        22 ~~~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .+...|.+  .+.||+|+||.||+|.+..+|+.||+|++.....    .....+.+|+.+++.+ +||||+++++++...
T Consensus        84 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~  158 (373)
T 2x4f_A           84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM----KDKEEVKNEISVMNQL-DHANLIQLYDAFESK  158 (373)
T ss_dssp             CGGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH----HHHHHHHHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             ccccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEEC
Confidence            34455666  6789999999999999999999999999976532    3346788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+.. +..+.+||+|||+|+
T Consensus       159 ~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~  237 (373)
T 2x4f_A          159 NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLAR  237 (373)
T ss_dssp             SEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCE
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCce
Confidence            9999999999999999988765 45999999999999999999999999999999999999853 345789999999998


Q ss_pred             cccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      ........       ...+||.+.+ ..++.++|+||+|+.+ .+.+...             .+-.+.-..+.+...+.
T Consensus       238 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il-~elltg~-------------~pf~~~~~~~~~~~i~~  302 (373)
T 2x4f_A          238 RYKPREKLKVNFGTPEFLAPEVVNY-DFVSFPTDMWSVGVIA-YMLLSGL-------------SPFLGDNDAETLNNILA  302 (373)
T ss_dssp             ECCTTCBCCCCCSSCTTCCHHHHTT-CBCCHHHHHHHHHHHH-HHHHHSS-------------CTTCCSSHHHHHHHHHH
T ss_pred             ecCCccccccccCCCcEeChhhccC-CCCCcHHhHHHHHHHH-HHHHhCC-------------CCCCCCCHHHHHHHHHh
Confidence            76543221       2338988764 5688899999995544 3332100             00011111112222222


Q ss_pred             hc-------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 KV-------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~~-------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..       ....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          303 CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             TCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            11       01334444555556677888899999998864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.3e-32  Score=257.16  Aligned_cols=244  Identities=23%  Similarity=0.299  Sum_probs=186.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .....+|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A           11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSL-AHQHVVGFHGFFEDND   88 (294)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred             CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC-HHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCC
Confidence            456678999999999999999999999999999999997654333 34556788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceec
Confidence            999999999999999999888889999999999999999999999999999999999999   77889999999999876


Q ss_pred             cccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          181 EEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       181 ~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .....        ....+||.+.+ ..++.++|+|++|+.++ +.+..              ..+-......+....+..
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-~l~~g--------------~~p~~~~~~~~~~~~~~~  229 (294)
T 2rku_A          166 EYDGERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMY-TLLVG--------------KPPFETSCLKETYLRIKK  229 (294)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHTT-SCBCTHHHHHHHHHHHH-HHHHS--------------SCTTCCSSHHHHHHHHHT
T ss_pred             ccCccccccccCCCCcCCcchhcc-CCCCchhhHHHHHHHHH-HHHhC--------------CCCCCCCCHHHHHHHHhh
Confidence            43221        11238888765 45788999999965543 32210              000001111111111111


Q ss_pred             ----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 ----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          +....+..-.+.+-+++..|.+.|+++.+.+..
T Consensus       230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          230 NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                112233333444555667788888988887754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5.5e-33  Score=263.36  Aligned_cols=248  Identities=16%  Similarity=0.150  Sum_probs=168.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .....++|++.+.||+|+||.||+|++..++.   .||||++.......  .....+.+|+.+++.+ +||||+++++++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   94 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIEEFLREAACMKEF-DHPHVAKLVGVS   94 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C--HHHHHHHHHHHHHTTC-CCTTBCCCCEEE
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH--HHHHHHHHHHHHHHHC-CCCceehhhcee
Confidence            44566789999999999999999999877765   89999987653332  3456788999999999 699999999999


Q ss_pred             ecCCeE------EEEEeccCCCChHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           97 EDETAV------HVVMELCQGGDLFDRIIAKG------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        97 ~~~~~~------~iv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                      ......      |+||||+++|+|.+++....      .+++..++.++.||+.||.|||++||+||||||+||++   +
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~  171 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---A  171 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---C
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---c
Confidence            877654      99999999999999997643      58999999999999999999999999999999999999   7


Q ss_pred             CCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC
Q 042392          165 DNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD  234 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D  234 (436)
                      .++.+||+|||+|+........          ...+||.+.+ ..|+.++|+||+|++++ +.+..             .
T Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ell~~-------------g  236 (323)
T 3qup_A          172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMW-EIMTR-------------G  236 (323)
T ss_dssp             TTSCEEECCCCC-----------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------S
T ss_pred             CCCCEEEeeccccccccccccccccccccCcccccCchhhcC-CCCCCccchhhHHHHHH-HHHhC-------------C
Confidence            7889999999999876442211          1238888876 46889999999965553 32210             0


Q ss_pred             CCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          235 TDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+-...+..++...+..     .....+.+-.+.+-+++..|+..|+++.+.+..+..
T Consensus       237 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          237 QTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             CCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            000000111122222111     112333444444555677888889998888776543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=8.9e-33  Score=259.67  Aligned_cols=244  Identities=26%  Similarity=0.403  Sum_probs=185.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||+|++.....    .....+.+|+.+++.+ +||||+++++++....
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKI-KHENIVTLEDIYESTT   79 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhC-CCCCeeehhhhcccCC
Confidence            4577899999999999999999999999999999999976432    2235688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+||||+++++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||++...+.++.+||+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME  159 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred             EEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence            99999999999999999998888999999999999999999999999999999999999965456789999999999765


Q ss_pred             ccc------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          181 EEE------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       181 ~~~------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ...      ......+||.+.+ ..|+.++|+||+|+.++ +.+..              ..+-...+..++...+..- 
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g--------------~~pf~~~~~~~~~~~i~~~~  223 (304)
T 2jam_A          160 QNGIMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITY-ILLCG--------------YPPFYEETESKLFEKIKEGY  223 (304)
T ss_dssp             CCBTTHHHHSCCCBCCTTTBSS-CSCCHHHHHHHHHHHHH-HHHHS--------------SCTTTTSCHHHHHHHHHHCC
T ss_pred             CCCccccccCCCCccChHHhcc-CCCCchhhHHHHHHHHH-HHHHC--------------CCCCCCCCHHHHHHHHHcCC
Confidence            432      1222338887765 46788999999965443 32210              0000011122222222211 


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 -------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 -------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                             ....+.+-.+.+-+++..|++.|++..|.+..
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          224 YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                   11234444555666778899999999988754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=6.2e-34  Score=279.36  Aligned_cols=249  Identities=24%  Similarity=0.364  Sum_probs=181.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK----YAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ..+.++|.+.+.||+|+||.||+|.+..+++.||||++.......    .......+.+|+.+|+.+ +||||+++++++
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~  209 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF  209 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            456788999999999999999999999999999999997653211    011223478999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .. ..+|+||||+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+...+....+||+|||+
T Consensus       210 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          210 DA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             ES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             ec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence            64 55899999999999999998888899999999999999999999999999999999999996544456799999999


Q ss_pred             cccccccCC-------CCCCChHHHHH--HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          177 ALLFEEEGG-------EASDDTSVILR--MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       177 a~~~~~~~~-------~~~~~pe~~~~--~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |+.......       ....|||.+.+  ...|+.++|+||+|+.++ +.++..      ..|   .... ....   +.
T Consensus       289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~-~lltg~------~pf---~~~~-~~~~---~~  354 (419)
T 3i6u_A          289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGY------PPF---SEHR-TQVS---LK  354 (419)
T ss_dssp             TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHH-HHHHSS------CSS---CCCS-SSCC---HH
T ss_pred             ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH-HHHHCC------CCC---CCCc-chHH---HH
Confidence            987654321       12338998753  356889999999965543 332100      001   1000 0111   11


Q ss_pred             HHHHhc--------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTKV--------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~--------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+..-        ....+..-.+.+-+++..|+..|++..|.+.+
T Consensus       355 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            111111        11344455556666778899999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=6.6e-33  Score=257.57  Aligned_cols=248  Identities=19%  Similarity=0.209  Sum_probs=175.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      .++...++|++.+.||+|+||.||+|.+..+   +..||+|++.....   ......+.+|+.+++.+ +||||++++++
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~   84 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMRQF-DHPHIVKLIGV   84 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS---HHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHHhC-CCCccceEEEE
Confidence            3456778999999999999999999998654   45699998865432   34456788999999999 69999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           96 HEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      +. .+..|+||||+++++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+||
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Df  160 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDF  160 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE---CCCCCEEECcc
Confidence            85 467899999999999999998764 59999999999999999999999999999999999999   56789999999


Q ss_pred             CCcccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          175 GSALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       175 G~a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+|+........         ...+||.+.+ ..|+.++|+||+|++++.-.....      ..|.       + .+..+
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~------~pf~-------~-~~~~~  225 (281)
T 1mp8_A          161 GLSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGV------KPFQ-------G-VKNND  225 (281)
T ss_dssp             ------------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSC------CTTT-------T-CCGGG
T ss_pred             ccccccCcccccccccCCCcccccChhhccc-CCCCCccCchHHHHHHHHHHhcCC------CCCC-------c-CCHHH
Confidence            999876542211         1338888865 468889999999655432211000      0000       0 11111


Q ss_pred             HHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          246 LRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       246 L~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +...+..     +....+..-.+.+-+++..|++.|+++.|.+..+...
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          226 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1111111     1223344444455566788899999999988776543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-33  Score=272.74  Aligned_cols=246  Identities=20%  Similarity=0.272  Sum_probs=180.0

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ....+|++.+.||+|+||.||+|++..+|+.||||++......        ..+|+.+++.+ +||||+++++++..   
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------~~~E~~il~~l-~hpnIv~l~~~~~~~~~   74 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------KNRELDIMKVL-DHVNIIKLVDYFYTTGD   74 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------CCHHHHHHTTC-CCTTBCCEEEEEEEC--
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------HHHHHHHHHHc-CCCCccchhheeeecCc
Confidence            4567899999999999999999999999999999998755322        23799999999 69999999999844   


Q ss_pred             -----------------------------------CCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHH
Q 042392           99 -----------------------------------ETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNA  139 (436)
Q Consensus        99 -----------------------------------~~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~  139 (436)
                                                         ...+++||||+++ +|.+.+..    ...+++..++.++.||+.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  153 (383)
T 3eb0_A           75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRA  153 (383)
T ss_dssp             -----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                                               3348999999985 88777654    4569999999999999999


Q ss_pred             HHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHH
Q 042392          140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVK  212 (436)
Q Consensus       140 l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~  212 (436)
                      |.|||++||+||||||+|||+.  ..++.+||+|||+|+........       ...|||.+.+...|+.++|+||+|+.
T Consensus       154 L~~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          154 VGFIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HHHHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHHHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            9999999999999999999993  24679999999999876443322       12399999876678999999999554


Q ss_pred             HHHhcC-------ChhhHHHHHHHhhhhCCCCCCccCHHHHHHH-----------------HHhcCCCCCHHHHHHHHHH
Q 042392          213 VIVEYL-------PGEETQALKEKFIEMDTDKNGTLSYDELRAG-----------------LTKVGSMLTEFDVKQLMEA  268 (436)
Q Consensus       213 ~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~-----------------l~~~~~~~s~~~i~~l~~~  268 (436)
                       +.+.+       +......+..+...+..+     +.+++...                 -..+....+.+-.+.+-+.
T Consensus       232 -l~ell~g~~pf~~~~~~~~~~~i~~~~g~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (383)
T 3eb0_A          232 -FGELILGKPLFSGETSIDQLVRIIQIMGTP-----TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI  305 (383)
T ss_dssp             -HHHHHHSSCSSCCSSHHHHHHHHHHHHCCC-----CHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             -HHHHHhCCCCCCCCChHHHHHHHHHHhCCC-----CHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence             43332       223344444544443332     12222111                 0112223444445556666


Q ss_pred             HcCCCCCcccHHHHHHH
Q 042392          269 ADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       269 ~d~d~~g~i~~~EF~~~  285 (436)
                      +..|+..|++..|.+.+
T Consensus       306 L~~dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          306 LRYEPDLRINPYEAMAH  322 (383)
T ss_dssp             CCSSGGGSCCHHHHHTS
T ss_pred             ccCChhhCCCHHHHhcC
Confidence            77788888888887654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.1e-34  Score=271.29  Aligned_cols=253  Identities=21%  Similarity=0.245  Sum_probs=183.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|++..+++.||||++......   .....+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEE
Confidence            36899999999999999999999999999999998654321   1112345799999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +||||+++ +|.+++...+ .+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||+|.....
T Consensus        77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A           77 LVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSI  152 (324)
T ss_dssp             EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC--
T ss_pred             EEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccC
Confidence            99999975 9999988764 48999999999999999999999999999999999999   7788999999999986543


Q ss_pred             cCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC----ccCH
Q 042392          183 EGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG----TLSY  243 (436)
Q Consensus       183 ~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g----~i~~  243 (436)
                      ....        ...+||.+.+...|+.++|+||+|++++ +.+       +......+..++..+..+...    ..+.
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~-~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY-EMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHH-HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence            2221        1238999887667899999999965543 322       222334444444444433221    1222


Q ss_pred             HHHHHH---------HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          244 DELRAG---------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       244 ~eL~~~---------l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .++...         +.......+.+-.+.+-+++..|+..|++..|.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            222111         001112344455556666777888888888887754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=4.3e-33  Score=269.16  Aligned_cols=245  Identities=18%  Similarity=0.235  Sum_probs=178.8

Q ss_pred             cccccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +....+|++.+.||+|+||.||+|++.   .++..||||++.....   ......+.+|+.+++.+ +||||+++++++.
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~  116 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT---EKQRRDFLGEASIMGQF-DHPNIIRLEGVVT  116 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe
Confidence            445568999999999999999999976   4677899999875432   33456789999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ..+.+|+||||+++|+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~  193 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGL  193 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC--
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcc
Confidence            9999999999999999999998754 59999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          177 ALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       177 a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+.......           ....+||.+.+ ..|+.++|+||+|+.++ +.++             ....+-...+..+
T Consensus       194 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~-ellt-------------~g~~P~~~~~~~~  258 (373)
T 2qol_A          194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLW-EVMS-------------YGERPYWEMSNQD  258 (373)
T ss_dssp             --------------------CTTSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TC-CTTTTCCHHH
T ss_pred             ccccccCCccceeccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHHH-HHHh-------------CCCCCCCCCCHHH
Confidence            987654221           12348998875 46889999999965544 3221             0001111122333


Q ss_pred             HHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          246 LRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       246 L~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +...+.. .    ....+.+-.+.+.+++..|+..|+++.+.+..+.
T Consensus       259 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~  305 (373)
T 2qol_A          259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD  305 (373)
T ss_dssp             HHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence            3333322 1    1123344445556677888899999999887654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=7.5e-33  Score=257.54  Aligned_cols=243  Identities=23%  Similarity=0.358  Sum_probs=184.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++...+.
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   88 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKR   88 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch-HHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCE
Confidence            35578999999999999999999999999999999986543221 22345788999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECS
T ss_pred             EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCc
Confidence            99999999999999999988889999999999999999999999999999999999999   778899999999997654


Q ss_pred             ccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh---
Q 042392          182 EEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK---  252 (436)
Q Consensus       182 ~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~---  252 (436)
                      .....      ...+||.+.+ ..++.++|+||+|+.++ +.+..              ..+-...+..+....+..   
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g--------------~~pf~~~~~~~~~~~~~~~~~  229 (284)
T 2vgo_A          166 SLRRRTMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCY-EFLVG--------------MPPFDSPSHTETHRRIVNVDL  229 (284)
T ss_dssp             SSCBCCCCSCGGGCCHHHHTT-CCBCTTHHHHHHHHHHH-HHHHS--------------SCTTCCSSHHHHHHHHHTTCC
T ss_pred             ccccccccCCCCcCCHHHhcc-CCCCcccchhhHHHHHH-HHHHC--------------CCCCCCCCHhHHHHHHhcccc
Confidence            42221      1228888775 46788999999965543 22210              000001112222222111   


Q ss_pred             -cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 -VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 -~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       +....+..-.+.+-+++..|++.|++..+.+.+
T Consensus       230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence             112334444444555667888889999887753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.7e-34  Score=278.38  Aligned_cols=243  Identities=9%  Similarity=-0.012  Sum_probs=175.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeece-------
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELK-------   93 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~-------   93 (436)
                      ...+|++.+.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+++.++  +||||++++       
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            4578999999999999999999999999999999997653332 344567889995555443  699999998       


Q ss_pred             eeeecCC-----------------eEEEEEeccCCCChHHHHHHcCCCCH-------HHHHHHHHHHHHHHHHHHHcCcc
Q 042392           94 SAHEDET-----------------AVHVVMELCQGGDLFDRIIAKGYYSE-------RDAAPVLRAIVNAVNVCHSMGVM  149 (436)
Q Consensus        94 ~~~~~~~-----------------~~~iv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~qi~~~l~~lH~~~i~  149 (436)
                      +++..++                 ..|+||||+ +|+|.+++...+.+++       ..++.++.||+.||.|||++||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  228 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  228 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence            6665553                 289999999 5799999987655555       77888999999999999999999


Q ss_pred             cccCCCCcceeeccCCCCcEEEEecCCccccccc----CCCCCCChHHHHHH----------HHHHHhhhhhhHHHHHHH
Q 042392          150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEE----GGEASDDTSVILRM----------KQFRRMSKLKKLTVKVIV  215 (436)
Q Consensus       150 Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~----~~~~~~~pe~~~~~----------~~~~~~~d~~s~~~~~~~  215 (436)
                      ||||||+|||+   +.++.+||+|||+|+.....    ......|||.+.+.          ..|+.++|+||+|+.+ .
T Consensus       229 HrDikp~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il-~  304 (377)
T 3byv_A          229 HTYLRPVDIVL---DQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI-Y  304 (377)
T ss_dssp             CSCCCGGGEEE---CTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH-H
T ss_pred             cCCCCHHHEEE---cCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHH-H
Confidence            99999999999   67889999999999865431    11334499998874          2688999999996554 3


Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +.+...      ..|...+  .      .+....+.......+.+-.+.+.+++..|++.|++..+.+..
T Consensus       305 elltg~------~Pf~~~~--~------~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          305 WIWCAD------LPITKDA--A------LGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHSS------CCC--------------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHCC------CCCcccc--c------ccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            322100      0010000  0      000001111113445555566667788899999999988754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.4e-32  Score=267.20  Aligned_cols=240  Identities=21%  Similarity=0.227  Sum_probs=176.2

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC-CCCeeeceeeeecCCeE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG-QPNIVELKSAHEDETAV  102 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~~~~  102 (436)
                      ..+|++.+.||+|+||.||+|.+.. ++.||||++......  ......+.+|+.+++.+.+ ||||+++++++...+.+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~--~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEAD--NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEeccccc--HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence            3569999999999999999999764 899999999765432  3455678999999999963 69999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||| +.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   + ++.+||+|||+|+.+..
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE---S-SSCEEECCCSSSCCC--
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---E-CCeEEEEecCccccccC
Confidence            99999 5577999999998889999999999999999999999999999999999999   3 47899999999987654


Q ss_pred             cCC----------CCCCChHHHHHH----------HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          183 EGG----------EASDDTSVILRM----------KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       183 ~~~----------~~~~~pe~~~~~----------~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      ...          ....|||++.+.          ..|+.++|+||+|+.+ .+.+...      ..|       .+...
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil-~ell~G~------~Pf-------~~~~~  272 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL-YYMTYGK------TPF-------QQIIN  272 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHH-HHHHHSS------CTT-------TTCCC
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHH-HHHHHCC------Ccc-------hhhhH
Confidence            321          112299998752          4688899999995544 3332100      000       01111


Q ss_pred             -HHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          243 -YDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       243 -~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       ...+...+..     +....+.+-.+.+-+++..|++.|++..|.+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence             1112222211     111223333344555678899999999998865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=7.1e-33  Score=274.79  Aligned_cols=248  Identities=17%  Similarity=0.187  Sum_probs=186.3

Q ss_pred             cccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           15 ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .....++...++|++.+.||+|+||.||+|.+. ++..||||++.....     ....+.+|+.+|+.+ +||||+++++
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~h~~iv~l~~  250 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-----SVEAFLAEANVMKTL-QHDKLVKLHA  250 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB-----CHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc-----cHHHHHHHHHHHhhC-CCCCEeeEEE
Confidence            334567888899999999999999999999985 467899999975432     245789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      ++. ...+|+|||||++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+
T Consensus       251 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~  326 (454)
T 1qcf_A          251 VVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIA  326 (454)
T ss_dssp             EEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEEC
T ss_pred             EEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEe
Confidence            986 56789999999999999999754  358999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccC-----C----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          173 DFGSALLFEEEG-----G----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       173 DFG~a~~~~~~~-----~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      |||+|+......     .    ....|||.+.. ..|+.++|+||+|+.++ +.++.             ...+-...+.
T Consensus       327 DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~-el~t~-------------g~~P~~~~~~  391 (454)
T 1qcf_A          327 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLM-EIVTY-------------GRIPYPGMSN  391 (454)
T ss_dssp             STTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------SCCSSTTCCH
T ss_pred             eCCCceEcCCCceeccCCCcccccccCHHHhcc-CCCCcHHHHHhHHHHHH-HHHhC-------------CCCCCCCCCH
Confidence            999998764321     1    11238998865 46889999999965543 32210             0111111233


Q ss_pred             HHHHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          244 DELRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       244 ~eL~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .++...+.. .    ....+.+-.+.+.+++..|++.|+++.+.+..+..
T Consensus       392 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~  441 (454)
T 1qcf_A          392 PEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  441 (454)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            333333322 1    11223333444555677888889999888876543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.3e-32  Score=261.82  Aligned_cols=250  Identities=19%  Similarity=0.217  Sum_probs=188.4

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNM-----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .++....+|++.+.||+|+||.||+|.+..++.     .||+|++.....   ......+.+|+.+++.+.+||||++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~  116 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH---ADEKEALMSELKIMSHLGQHENIVNLL  116 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC---hHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            466677899999999999999999999987664     799999875532   234567889999999995699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcce
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAK--------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFC  159 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nil  159 (436)
                      +++...+.+|+||||+++|+|.+++...              ..+++..++.++.||+.||.|||++||+||||||+||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL  196 (333)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCE
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEE
Confidence            9999999999999999999999999763              34789999999999999999999999999999999999


Q ss_pred             eeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHH
Q 042392          160 FISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKE  228 (436)
Q Consensus       160 l~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~  228 (436)
                      +   +.++.+||+|||+|.........          ...+||.+.+ ..++.++|+||+|+. +.+.++ ..       
T Consensus       197 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i-l~el~t~g~-------  264 (333)
T 2i1m_A          197 L---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGIL-LWEIFSLGL-------  264 (333)
T ss_dssp             E---EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHH-HHHHTTTSC-------
T ss_pred             E---CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHH-HHHHHcCCC-------
Confidence            9   66789999999999876443211          1338998876 468899999999554 444332 10       


Q ss_pred             HhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          229 KFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       229 ~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                            .+-.+......+...+..-     ....+..-...+-+++..|++.|+++.+.+..+...
T Consensus       265 ------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          265 ------NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             ------CSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence                  0111112222233333221     112233333445556788899999999998776543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.2e-33  Score=261.97  Aligned_cols=243  Identities=20%  Similarity=0.280  Sum_probs=175.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----------------------hhHHHHHHHHHHH
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----------------------AENDMMIRREIQI   79 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------~~~~~~~~~E~~~   79 (436)
                      ...++|++.+.||+|+||.||+|++..+++.||||++........                      ......+.+|+.+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            345789999999999999999999999999999999976542210                      1123458899999


Q ss_pred             HHhcCCCCCeeeceeeeec--CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           80 RRLLSGQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        80 l~~l~~h~niv~~~~~~~~--~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                      ++.+ +||||+++++++..  ...+|+||||+++++|.+++. ..++++..++.++.||+.||.|||++||+||||||+|
T Consensus        90 l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           90 LKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             HHTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999 69999999999986  568999999999999987643 3569999999999999999999999999999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCC--------CCCCChHHHHHHHH--HHHhhhhhhHHHHHHHhcCChhhHHHHH
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGG--------EASDDTSVILRMKQ--FRRMSKLKKLTVKVIVEYLPGEETQALK  227 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~--------~~~~~pe~~~~~~~--~~~~~d~~s~~~~~~~~~l~~e~~~~l~  227 (436)
                      ||+   +.++.+||+|||+|........        ....+||.+.+...  ++.++|+||+|+.++ +.+..       
T Consensus       168 il~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~-~l~~g-------  236 (298)
T 2zv2_A          168 LLV---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY-CFVFG-------  236 (298)
T ss_dssp             EEE---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH-HHHHS-------
T ss_pred             EEE---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH-HHHHC-------
Confidence            999   7788999999999987654321        11228998865432  478899999965543 22210       


Q ss_pred             HHhhhhCCCCCCccCHHHHHHHHHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          228 EKFIEMDTDKNGTLSYDELRAGLTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       228 ~~F~~~D~~~~g~i~~~eL~~~l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                             ..+-......++...+....      ...+..-.+.+-+++..|++.|++..|.+.
T Consensus       237 -------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          237 -------QCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             -------SCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -------CCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                   00000111222222222211      123444445555677888999999888764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=7.7e-33  Score=266.46  Aligned_cols=187  Identities=20%  Similarity=0.242  Sum_probs=162.8

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+...++|++.+.||+|+||.||+|.+..+++.||+|++.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  102 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS  102 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC---HHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEE
Confidence            345667899999999999999999999999999999999976532   34456789999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      .+.+|+||||+++++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+||++   +.++.+||+|||+|
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          103 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVS  179 (360)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCC
T ss_pred             CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCC
Confidence            999999999999999999999888899999999999999999999985 99999999999999   77889999999999


Q ss_pred             ccccccC------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          178 LLFEEEG------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       178 ~~~~~~~------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......      .....+||.+.+ ..|+.++|+||+|+.+
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  220 (360)
T 3eqc_A          180 GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  220 (360)
T ss_dssp             HHHHHHC----CCCCTTCCHHHHTT-CCCSHHHHHHHHHHHH
T ss_pred             cccccccccCCCCCCCeECHHHHcC-CCCCchhhHHHHHHHH
Confidence            7653321      122338998876 4688999999996554

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.1e-32  Score=273.22  Aligned_cols=246  Identities=18%  Similarity=0.202  Sum_probs=181.4

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...|+...++|++.+.||+|+||.||+|.+.. +..||||++.....     ....+.+|+.+|+.+ +||||+++++++
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~hp~iv~~~~~~  248 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-----SPEAFLQEAQVMKKL-RHEKLVQLYAVV  248 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS-----CHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC-----CHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            45677888999999999999999999999865 46799999876432     235688999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      .. +.+|+||||+++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+||
T Consensus       249 ~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~Df  324 (452)
T 1fmk_A          249 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADF  324 (452)
T ss_dssp             CS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCC
T ss_pred             cC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCC
Confidence            76 6789999999999999999753  459999999999999999999999999999999999999   67789999999


Q ss_pred             CCcccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          175 GSALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       175 G~a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+|+........         ...|||.+.+ ..|+.++|+||+|+.++ +.++.             ...+-...+..+
T Consensus       325 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~-el~t~-------------g~~P~~~~~~~~  389 (452)
T 1fmk_A          325 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLT-ELTTK-------------GRVPYPGMVNRE  389 (452)
T ss_dssp             CTTC--------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------TCCSSTTCCHHH
T ss_pred             ccceecCCCceecccCCcccccccCHhHHhc-CCCCccccHHhHHHHHH-HHHhC-------------CCCCCCCCCHHH
Confidence            999876532211         1238998875 46889999999965543 32210             001111122233


Q ss_pred             HHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          246 LRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       246 L~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +...+.. .    ....+..-.+.+.+++..|++.|+++.+.+..+..
T Consensus       390 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~  437 (452)
T 1fmk_A          390 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  437 (452)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            3332222 1    11223333444555677888889999888876543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.9e-32  Score=255.21  Aligned_cols=246  Identities=24%  Similarity=0.367  Sum_probs=187.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.++|++.+.||+|+||.||+|++..+++.||+|++.......  .....+.+|+.+++.+ +||||+++++++...
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKL-DHPNIMKLFEILEDS   93 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SCHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HHHHHHHHHHHHHHhc-cCCCccEEEEEEeCC
Confidence            3557789999999999999999999999999999999987654322  3346788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      +.+|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+|||++..
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~  173 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred             CeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence            99999999999999999998888899999999999999999999999999999999999995444456899999999987


Q ss_pred             ccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          180 FEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       180 ~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      .......       ...+||.+.+  .++.++|+||+|+.++ +.+..              ..+-...+..++...+..
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~Di~slG~~l~-~l~~g--------------~~p~~~~~~~~~~~~~~~  236 (287)
T 2wei_A          174 FQQNTKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILY-ILLSG--------------TPPFYGKNEYDILKRVET  236 (287)
T ss_dssp             BCCCSSCSCHHHHHTTCCHHHHTT--CCCTHHHHHHHHHHHH-HHHHS--------------SCSSCCSSHHHHHHHHHH
T ss_pred             ecCCCccccccCcccccChHHhcC--CCCCchhhHhHHHHHH-HHHhC--------------CCCCCCCCHHHHHHHHHc
Confidence            6543322       1238998765  4788999999965543 32210              000001122222222221


Q ss_pred             cC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 VG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      -.        ...+.+-.+.+-+++..|+..|++..|.+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            11        1234444455556677888999999888764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=8e-33  Score=263.13  Aligned_cols=180  Identities=22%  Similarity=0.222  Sum_probs=154.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +..+|++.+.||+|+||.||+|++..+++.||||++......      ..+.+|+.+++.+.+||||+++++++......
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   80 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA------PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN   80 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS------CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch------HHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence            557899999999999999999999999999999998755322      24779999999996699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc-----EEEEecCC
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL-----LKVTDFGS  176 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~-----~kl~DFG~  176 (436)
                      |+||||+ +++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+|||+   +.++.     +||+|||+
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill---~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           81 AMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI---GRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CCGGGTCTTSEEECCCTT
T ss_pred             EEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---ccCCCCCCceEEEEEccc
Confidence            9999999 88999999874 579999999999999999999999999999999999999   55555     99999999


Q ss_pred             cccccccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          177 ALLFEEEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       177 a~~~~~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+.+.....               ....+||.+.+ ..|+.++|+||+|+.+
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  207 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG-KEQSRRDDLEALGHMF  207 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHcC-CCCCchhHHHHHHHHH
Confidence            987644221               12228998876 5688999999996544

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.2e-33  Score=268.20  Aligned_cols=185  Identities=21%  Similarity=0.314  Sum_probs=155.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED---   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   98 (436)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++.......  .....+.+|+.+++.+ +||||+++++++..   
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLL-KHENVVNLIEICRTKAS   90 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--SSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--cchHHHHHHHHHHHhc-cCCCcccHhheeecccc
Confidence            45689999999999999999999999999999999986654332  2334677999999999 69999999999876   


Q ss_pred             -----CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 -----ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 -----~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                           .+.+|+|||||++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus        91 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~  166 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLA  166 (351)
T ss_dssp             ------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEEC
T ss_pred             ccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEc
Confidence                 4568999999986 888887664 569999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |||+|+.+.....            ....|||++.+...|+.++|+||+|+.+
T Consensus       167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  219 (351)
T 3mi9_A          167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM  219 (351)
T ss_dssp             CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHH
Confidence            9999987642111            1122899998766789999999996544

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3e-32  Score=255.19  Aligned_cols=192  Identities=28%  Similarity=0.409  Sum_probs=161.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-----hhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-----YAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ...+.++|++.+.||+|+||.||+|.+..+|+.||||++.......     .......+.+|+.+++.+.+||||+++++
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (298)
T 1phk_A           12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   91 (298)
T ss_dssp             ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence            4567789999999999999999999999999999999997653211     12334567899999999966999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ++...+.+|+||||+++++|.+++.....+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~df  168 (298)
T 1phk_A           92 TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDF  168 (298)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCC
T ss_pred             eeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEecc
Confidence            999999999999999999999999988889999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCCC-------CCCChHHHHHH-----HHHHHhhhhhhHHHHHH
Q 042392          175 GSALLFEEEGGE-------ASDDTSVILRM-----KQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       175 G~a~~~~~~~~~-------~~~~pe~~~~~-----~~~~~~~d~~s~~~~~~  214 (436)
                      |++.........       ...+||.+.+.     ..++.++|+||+|+.++
T Consensus       169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~  220 (298)
T 1phk_A          169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY  220 (298)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred             cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHH
Confidence            999876543221       12289988643     24678999999965543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.9e-33  Score=274.07  Aligned_cols=243  Identities=26%  Similarity=0.374  Sum_probs=175.5

Q ss_pred             ccccceeee-eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--
Q 042392           22 DVMLHYSFG-RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--   98 (436)
Q Consensus        22 ~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--   98 (436)
                      .+.++|.+. +.||+|+||.||+|.+..+++.||||++...         ..+.+|+.++..+.+||||+++++++..  
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~  128 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLY  128 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecc
Confidence            456778887 7999999999999999999999999998632         2466888887665579999999999875  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           99 --ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        99 --~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                        ...+|+|||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+.....++.+||+||
T Consensus       129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence              567999999999999999998754  4999999999999999999999999999999999999954333789999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |+|+.......       ....+||++.+ ..|+.++|+||+|+.++ +.+...      ..|   .......+... +.
T Consensus       209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~-ell~g~------~pf---~~~~~~~~~~~-~~  276 (400)
T 1nxk_A          209 GFAKETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMY-ILLCGY------PPF---YSNHGLAISPG-MK  276 (400)
T ss_dssp             TTCEECC-----------CTTCCGGGSCC-CCSSSHHHHHHHHHHHH-HHHHSS------CSC---CCCTTCSSCCS-HH
T ss_pred             ccccccCCCCccccCCCCCCccCHhhcCC-CCCCCcccHHHHHHHHH-HHHhCC------CCC---CCCccccccHH-HH
Confidence            99987654321       12338998754 56889999999955543 332110      001   11110011100 11


Q ss_pred             HHHHh--cC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTK--VG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~--~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+..  +.      ...+.+-.+.+-+++..|...|++..|.+.+
T Consensus       277 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          277 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11111  11      1234444444555677888999999998865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.8e-33  Score=264.16  Aligned_cols=185  Identities=25%  Similarity=0.336  Sum_probs=157.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ...+|++.+.||+|+||.||+|++..+++.||||++....... ......+.+|+.+++.+ +||||+++++++...+..
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~  129 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA  129 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc-hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeE
Confidence            4467999999999999999999999999999999997654332 34456788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||++| +|.+++.. ..++++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|....
T Consensus       130 ~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          130 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSS
T ss_pred             EEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceecC
Confidence            999999974 88888864 4569999999999999999999999999999999999999   677899999999998775


Q ss_pred             ccCCCC----CCChHHHHH--HHHHHHhhhhhhHHHHH
Q 042392          182 EEGGEA----SDDTSVILR--MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~~~----~~~pe~~~~--~~~~~~~~d~~s~~~~~  213 (436)
                      ......    ..|||.+.+  ...|+.++|+||+|+++
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il  243 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  243 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHH
T ss_pred             CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHH
Confidence            443322    229999874  34688899999995554

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=5e-33  Score=264.43  Aligned_cols=178  Identities=25%  Similarity=0.390  Sum_probs=152.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~  100 (436)
                      ..++|++.+.||+|+||.||+|++..+++.||||++....       ...+.+|+.+++.+.+||||+++++++..  ..
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~  106 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-------KKKIKREIKILENLRGGPNIITLADIVKDPVSR  106 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC
Confidence            3568999999999999999999999999999999986432       34688999999999669999999999987  56


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC-cEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~-~~kl~DFG~a~~  179 (436)
                      ..++||||+++++|.+++.   .+++..++.++.||+.||.|||++||+||||||+|||+   +.++ .+||+|||+|+.
T Consensus       107 ~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          107 TPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             CEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTTTEEEECCCTTCEE
T ss_pred             ceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---cCCCCEEEEEeCCCceE
Confidence            7999999999999988874   38999999999999999999999999999999999999   4344 899999999987


Q ss_pred             ccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          180 FEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       180 ~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........       ..+||.+.+...|+.++|+||+|+++
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  221 (330)
T 3nsz_A          181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML  221 (330)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHH
Confidence            65432211       22899987767789999999996554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.9e-32  Score=254.13  Aligned_cols=248  Identities=16%  Similarity=0.168  Sum_probs=186.1

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |++...|+...++|++.+.||+|+||.||+|.+. ++..||+|++.....     ....+.+|+.+++.+ +||||++++
T Consensus         2 ~~~~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~h~~i~~~~   74 (279)
T 1qpc_A            2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-----SPDAFLAEANLMKQL-QHQRLVRLY   74 (279)
T ss_dssp             CTTTCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-----CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             CcchhhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-----cHHHHHHHHHHHHhC-CCcCcceEE
Confidence            5666788889999999999999999999999975 577899999875432     235688999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      +++.. +..|+||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||
T Consensus        75 ~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl  150 (279)
T 1qpc_A           75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKI  150 (279)
T ss_dssp             EEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEE
T ss_pred             EEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEE
Confidence            99864 56899999999999999987543  69999999999999999999999999999999999999   77889999


Q ss_pred             EecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          172 TDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       172 ~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      +|||++........         ....+||.+.+ ..++.++|+||+|+.++ +.++.             ...+-...+
T Consensus       151 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~~-------------g~~p~~~~~  215 (279)
T 1qpc_A          151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLT-EIVTH-------------GRIPYPGMT  215 (279)
T ss_dssp             CCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHH-HHHTT-------------TCCSSTTCC
T ss_pred             CCCcccccccCcccccccCCCCccCccChhhhcc-CCCCchhhhHHHHHHHH-HHHhC-------------CCCCCcccC
Confidence            99999987654221         12338888865 46788999999965543 22210             000101112


Q ss_pred             HHHHHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          243 YDELRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       243 ~~eL~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ..++...+.. .    ....+.+-.+.+-+++..|++.|+++.+.+..+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  265 (279)
T 1qpc_A          216 NPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (279)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence            2233222221 1    1223333344455567788888999998887654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.6e-32  Score=271.92  Aligned_cols=244  Identities=15%  Similarity=0.174  Sum_probs=182.1

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ..++...++|++.+.||+|+||.||+|.+.  ++.||||++....      ....+.+|+.+|+.+ +||||+++++++.
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~------~~~~~~~E~~~l~~l-~h~niv~~~~~~~  256 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA------TAQAFLAEASVMTQL-RHSNLVQLLGVIV  256 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT------TSHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch------HHHHHHHHHHHHHhc-cCCCEEEEEEEEE
Confidence            345667789999999999999999999974  7799999997543      234688999999999 6999999999976


Q ss_pred             cCC-eEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           98 DET-AVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        98 ~~~-~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ... .+|+|||||++|+|.+++...+.  +++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+||
T Consensus       257 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~Df  333 (450)
T 1k9a_A          257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDF  333 (450)
T ss_dssp             CTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCC
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeC
Confidence            654 79999999999999999988654  7999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          175 GSALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       175 G~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      |+|+.......     ....|||.+.+ ..|+.++|+||+|+.+ .+.++.             ...+-...+..++...
T Consensus       334 G~a~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l-~el~t~-------------g~~P~~~~~~~~~~~~  398 (450)
T 1k9a_A          334 GLTKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL-WEIYSF-------------GRVPYPRIPLKDVVPR  398 (450)
T ss_dssp             TTCEECC------CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHH-HHHHTT-------------TCCSSTTSCTTTHHHH
T ss_pred             CCcccccccccCCCCCcceeCHHHhcC-CCCCcHHHHHHHHHHH-HHHHhC-------------CCCCCCCCCHHHHHHH
Confidence            99986543221     12338998875 4688999999995554 333210             0001011111222222


Q ss_pred             HHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          250 LTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       250 l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +.. .    ....+.+-.+.+-+++..|++.|+++.+.+..+..
T Consensus       399 i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          399 VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            221 1    12233333444555678889999999998876543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=5.4e-33  Score=263.34  Aligned_cols=249  Identities=25%  Similarity=0.385  Sum_probs=181.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK----YAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||++.......    .......+.+|+.+++.+ +||||+++++++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   84 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF   84 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEE
Confidence            456789999999999999999999999999999999987543211    112234578999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .... +|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++...+....+||+|||+
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence            7665 899999999999999998888899999999999999999999999999999999999995433445699999999


Q ss_pred             ccccccc-------CCCCCCChHHHHH--HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          177 ALLFEEE-------GGEASDDTSVILR--MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       177 a~~~~~~-------~~~~~~~pe~~~~--~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +......       ......+||.+.+  ...|+.++|+||+|+.++ +.+...      ..|   ..... ...   +.
T Consensus       164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~-~l~~g~------~pf---~~~~~-~~~---~~  229 (322)
T 2ycf_A          164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGY------PPF---SEHRT-QVS---LK  229 (322)
T ss_dssp             CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHH-HHHHSS------CSS---CSTTC-SSC---HH
T ss_pred             ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHH-HHHhCC------CCC---cccch-HHH---HH
Confidence            9876442       2233449998863  356788999999965543 322100      001   10000 011   11


Q ss_pred             HHHHhc--------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTKV--------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~--------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+..-        ....+..-.+.+-+++..|++.|++..+.+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            111111        11234444555666778899999999998754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.2e-32  Score=261.55  Aligned_cols=254  Identities=19%  Similarity=0.188  Sum_probs=183.7

Q ss_pred             ccceeeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee--
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE--   97 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--   97 (436)
                      ..+|++.+.||+|+||.||+|+    +..+++.||||++....    ......+.+|+.+++.+ +||||+++++++.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKAL-HSDFIVKYRGVSYGP   96 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC----HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC----HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC
Confidence            4689999999999999999999    46789999999987553    34456789999999999 6999999999886  


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ....+|+||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~  173 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGL  173 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGG
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEccccc
Confidence            456799999999999999999874 459999999999999999999999999999999999999   6678999999999


Q ss_pred             cccccccCC------C-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHH-HHHHHhhhhCCCCCCccCHH
Q 042392          177 ALLFEEEGG------E-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQ-ALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       177 a~~~~~~~~------~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~-~l~~~F~~~D~~~~g~i~~~  244 (436)
                      +........      .     ...+||.+.+ ..++.++|+||+|++++.-..+..... ............ .......
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~-~~~~~~~  251 (327)
T 3lxl_A          174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE-RDVPALS  251 (327)
T ss_dssp             CEECCTTCSEEECSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-----CCHHH
T ss_pred             ceecccCCccceeeccCCccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc-cccccHH
Confidence            987643221      0     1238888866 467899999999655433222111000 001111111111 1122233


Q ss_pred             HHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          245 ELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       245 eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ++...+..-     ....+..-.+.+-+++..|+..|+++.|.+..+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  299 (327)
T 3lxl_A          252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD  299 (327)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            333333321     1233444444555567788888999998887654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.1e-32  Score=261.01  Aligned_cols=190  Identities=27%  Similarity=0.432  Sum_probs=161.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK----YAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||||++.......    .......+.+|+.+++.+.+||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            345578999999999999999999999999999999987654221    1223456789999999996699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ......|+||||++|++|.+++.....+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~  246 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGF  246 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCc
Confidence            9999999999999999999999988889999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccCCC-------CCCChHHHHHH-----HHHHHhhhhhhHHHHH
Q 042392          177 ALLFEEEGGE-------ASDDTSVILRM-----KQFRRMSKLKKLTVKV  213 (436)
Q Consensus       177 a~~~~~~~~~-------~~~~pe~~~~~-----~~~~~~~d~~s~~~~~  213 (436)
                      +..+......       ...+||.+.+.     ..|+.++|+||+|+.+
T Consensus       247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il  295 (365)
T 2y7j_A          247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL  295 (365)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHH
T ss_pred             ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHH
Confidence            9876543221       12289988753     2477899999996554

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=8.5e-33  Score=256.96  Aligned_cols=240  Identities=18%  Similarity=0.284  Sum_probs=181.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--   98 (436)
                      ..+..+|++.+.||+|+||.||+|.+..+++.||+|++....        ..+.+|+.+++.+ +||||+++++++..  
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   77 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKL-DHVNIVHYNGCWDGFD   77 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEE
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhC-CCCCEEEEeeeEeccc
Confidence            456678999999999999999999999999999999987543        2356899999999 69999999998854  


Q ss_pred             --------------CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec
Q 042392           99 --------------ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS  162 (436)
Q Consensus        99 --------------~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~  162 (436)
                                    ...+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||++  
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~--  155 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL--  155 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE--
Confidence                          45589999999999999999765  569999999999999999999999999999999999999  


Q ss_pred             cCCCCcEEEEecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhC
Q 042392          163 RDDNALLKVTDFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMD  234 (436)
Q Consensus       163 ~~~~~~~kl~DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D  234 (436)
                       +.++.+||+|||++.........       ...+||.+.+ ..++.++|+||+|+.++ +.+ ...........+..+.
T Consensus       156 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~~~~~~~~~~~~~~~~~  232 (284)
T 2a19_B          156 -VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILA-ELLHVCDTAFETSKFFTDLR  232 (284)
T ss_dssp             -EETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHH-HHHSCCSSHHHHHHHHHHHH
T ss_pred             -cCCCCEEECcchhheeccccccccccCCcccccChhhhcc-CCCcchhhhHHHHHHHH-HHHhcCCcchhHHHHHHHhh
Confidence             56789999999999876543221       2238888875 46788999999955543 333 1111111111111110


Q ss_pred             CCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          235 TDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      .   +            .+....+..-.+.+-+++..|+..|+++.|.+..+...
T Consensus       233 ~---~------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          233 D---G------------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             T---T------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c---c------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0   0            01223344444445556778888999999988876544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.6e-33  Score=274.02  Aligned_cols=257  Identities=21%  Similarity=0.263  Sum_probs=179.4

Q ss_pred             ccccccceee-eeeecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSF-GRMLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .+.+.+.|.+ .++||+|+||.||+|+++  .+++.||||++......      ..+.+|+.+|+.+ +||||+++++++
T Consensus        15 ~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~E~~~l~~l-~hpniv~~~~~~   87 (405)
T 3rgf_A           15 RERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS------MSACREIALLREL-KHPNVISLQKVF   87 (405)
T ss_dssp             CCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC------HHHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred             hhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC------HHHHHHHHHHHhc-CCCCeeeEeeEE
Confidence            3456677888 558999999999999976  57899999998654322      3578999999999 699999999999


Q ss_pred             e--cCCeEEEEEeccCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-C
Q 042392           97 E--DETAVHVVMELCQGGDLFDRIIAK---------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-D  164 (436)
Q Consensus        97 ~--~~~~~~iv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-~  164 (436)
                      .  ....+|+||||+.+ +|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +
T Consensus        88 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~  166 (405)
T 3rgf_A           88 LSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP  166 (405)
T ss_dssp             EETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSST
T ss_pred             ecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCC
Confidence            4  46789999999975 898888642         148999999999999999999999999999999999999543 3


Q ss_pred             CCCcEEEEecCCcccccccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-C---h---------
Q 042392          165 DNALLKVTDFGSALLFEEEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-P---G---------  220 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~---~---------  220 (436)
                      ..+.+||+|||+|+......           .....|||++.+...|+.++|+||+|+++ .+.+ +   .         
T Consensus       167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il-~ell~g~~pf~~~~~~~~~  245 (405)
T 3rgf_A          167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF-AELLTSEPIFHCRQEDIKT  245 (405)
T ss_dssp             TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHH-HHHHHSSCTTCCCC-----
T ss_pred             CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHH-HHHHhCCCCCCCccccccc
Confidence            56799999999998765321           11233999998766799999999995544 3332 1   1         


Q ss_pred             ---hhHHHHHHHhhhhCCCCCCcc-------CHHHH--------------HHHHHhcCCCCCHHHHHHHHHHHcCCCCCc
Q 042392          221 ---EETQALKEKFIEMDTDKNGTL-------SYDEL--------------RAGLTKVGSMLTEFDVKQLMEAADMDGNGA  276 (436)
Q Consensus       221 ---e~~~~l~~~F~~~D~~~~g~i-------~~~eL--------------~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~  276 (436)
                         .....+..++..+..+.....       ....+              ..++.......+..-.+.+-+++..|+..|
T Consensus       246 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R  325 (405)
T 3rgf_A          246 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR  325 (405)
T ss_dssp             -CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGS
T ss_pred             cccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccC
Confidence               123556666666654443211       11111              112222222334444556666778888888


Q ss_pred             ccHHHHHHH
Q 042392          277 IDYTEFTAA  285 (436)
Q Consensus       277 i~~~EF~~~  285 (436)
                      ++..|.+.+
T Consensus       326 ~ta~e~L~h  334 (405)
T 3rgf_A          326 ITSEQAMQD  334 (405)
T ss_dssp             CCHHHHHTS
T ss_pred             CCHHHHhcC
Confidence            888887764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.1e-32  Score=258.59  Aligned_cols=183  Identities=24%  Similarity=0.364  Sum_probs=155.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----   98 (436)
                      +.++|++.+.||+|+||.||+|++..+++.||||++...     ......+.+|+.+++.+ +||||+++++++..    
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   77 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNF   77 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcch
Confidence            567899999999999999999999999999999998643     23456788999999999 69999999998754    


Q ss_pred             ---------CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392           99 ---------ETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus        99 ---------~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                               ...+|+||||+++|+|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||++   +.++.
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~  154 (303)
T 1zy4_A           78 VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRN  154 (303)
T ss_dssp             CC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSC
T ss_pred             hhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCC
Confidence                     456899999999999999998654 47889999999999999999999999999999999999   77889


Q ss_pred             EEEEecCCccccccc----------------------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          169 LKVTDFGSALLFEEE----------------------GGEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~----------------------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +||+|||++......                      ......+||.+.+...++.++|+||+|+.++
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  222 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF  222 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence            999999999876421                      1112238998876557889999999965543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.9e-33  Score=261.85  Aligned_cols=249  Identities=16%  Similarity=0.144  Sum_probs=181.8

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      -..+|++.+.||+|+||.||+|++.  ++.||||++....     .......+|+.+++.+ +||||+++++++....  
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   93 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSV   93 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSS
T ss_pred             chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-----hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCC
Confidence            4468999999999999999999875  7899999986542     2334556799999999 6999999999998743  


Q ss_pred             --eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc----------CcccccCCCCcceeeccCCCCc
Q 042392          101 --AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM----------GVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~----------~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                        .+|+|||||++|+|.+++... .+++..++.++.|++.||.|||+.          +|+||||||+|||+   +.++.
T Consensus        94 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~  169 (322)
T 3soc_A           94 DVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLT  169 (322)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCC
T ss_pred             CceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCe
Confidence              479999999999999999764 599999999999999999999999          99999999999999   77889


Q ss_pred             EEEEecCCcccccccCCC----------CCCChHHHHHH----HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC
Q 042392          169 LKVTDFGSALLFEEEGGE----------ASDDTSVILRM----KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD  234 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~----~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D  234 (436)
                      +||+|||+|+........          ...+||.+.+.    ..++.++|+||+|+.+ .+.++...      .|....
T Consensus       170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il-~el~tg~~------pf~~~~  242 (322)
T 3soc_A          170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL-WELASRCT------AADGPV  242 (322)
T ss_dssp             EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHH-HHHHTTBT------TSSSCC
T ss_pred             EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHH-HHHHhCCC------CCCCCc
Confidence            999999999876543221          11289988763    6788999999995544 34332110      010000


Q ss_pred             CC--------CCCccCHHHHHHHHHhcCCCC----------CHHHH-HHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          235 TD--------KNGTLSYDELRAGLTKVGSML----------TEFDV-KQLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       235 ~~--------~~g~i~~~eL~~~l~~~~~~~----------s~~~i-~~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      ..        ..+..+..++..........+          ...++ +.+-+++..|+..|++..|.+..+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          243 DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            00        011223444444333222111          12334 4455567888999999999988776543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.2e-33  Score=262.04  Aligned_cols=259  Identities=20%  Similarity=0.198  Sum_probs=187.1

Q ss_pred             ccccccce-eeeeeecccCCeEEEEEEE----CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHY-SFGRMLGRGRFGVTYLCTE----NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ...+..+| ++++.||+|+||.||+|..    ..+++.||||++.....   ......+.+|+.+++.+ +||||+++++
T Consensus        25 ~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~  100 (318)
T 3lxp_A           25 PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG---PQHRSGWKQEIDILRTL-YHEHIIKYKG  100 (318)
T ss_dssp             CCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             CceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC---hHHHHHHHHHHHHHHhC-CCcchhhEEE
Confidence            34566677 9999999999999988754    45789999999976532   34456789999999999 5999999999


Q ss_pred             eeec--CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           95 AHED--ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        95 ~~~~--~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      ++..  ...+|+||||+++|+|.+++... .+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+
T Consensus       101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~  176 (318)
T 3lxp_A          101 CCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIG  176 (318)
T ss_dssp             EEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEEC
T ss_pred             EEecCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEEC
Confidence            9987  46799999999999999998764 49999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          173 DFGSALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       173 DFG~a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                      |||+|........           ....+||.+.+ ..++.++|+||+|++++.-..+..........+........+..
T Consensus       177 Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~  255 (318)
T 3lxp_A          177 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM  255 (318)
T ss_dssp             CGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH
T ss_pred             CccccccccccccccccccCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch
Confidence            9999987654221           01238998876 46778999999965543332221111111111111112233334


Q ss_pred             CHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          242 SYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       242 ~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...++...+..-     ....+.+-.+.+-+++..|+..|+++.|.+..+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  306 (318)
T 3lxp_A          256 TVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK  306 (318)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            444444444432     1233444444555567888889999999887654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-32  Score=260.02  Aligned_cols=239  Identities=20%  Similarity=0.194  Sum_probs=176.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC--CCeeeceeeeecCC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ--PNIVELKSAHEDET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~  100 (436)
                      ...+|++.+.||+|+||.||+|.+ .+++.||||++......  ......+.+|+.+++.+. |  |||+++++++....
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~-~~~~~iv~~~~~~~~~~   82 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEAD--NQTLDSYRNEIAYLNKLQ-QHSDKIIRLYDYEITDQ   82 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHT-TTCTTBCCEEEEEECSS
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccc--hHHHHHHHHHHHHHHhhh-hcCCceEEEeeeEeeCC
Confidence            456799999999999999999997 56899999999765433  344567899999999995 5  99999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||+ .+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   + ++.+||+|||+|+..
T Consensus        83 ~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll---~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           83 YIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---E-TTEEEECCCSSSCCC
T ss_pred             EEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---E-CCcEEEeeccccccc
Confidence            99999995 577999999998889999999999999999999999999999999999999   3 578999999999876


Q ss_pred             cccCC----------CCCCChHHHHH----------HHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCC
Q 042392          181 EEEGG----------EASDDTSVILR----------MKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       181 ~~~~~----------~~~~~pe~~~~----------~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      .....          ....+||.+.+          ...|+.++|+||+|+.++ +.+ +...       |       .+
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~-ell~g~~p-------f-------~~  222 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTP-------F-------QQ  222 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHH-HHHHSSCT-------T-------TT
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHH-HHHhCCCc-------c-------hh
Confidence            43321          12238999875          256788999999965543 322 1100       0       01


Q ss_pred             ccC-HHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 TLS-YDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 ~i~-~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ... ...+...+..     +....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          223 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            111 1112222111     111222333344555678899999999998765

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-33  Score=266.78  Aligned_cols=259  Identities=19%  Similarity=0.240  Sum_probs=182.3

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch-hhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....+|++.+.||+|+||.||+|++..+|+.||||++........ ......+.+|+.+++.+ +||||+++++++...
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   84 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHK   84 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeC
Confidence            3456789999999999999999999999999999999875432210 11123578999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      ..+|+||||+++ +|.+++.... .+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|+
T Consensus        85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAK  160 (346)
T ss_dssp             TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGS
T ss_pred             CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccce
Confidence            999999999986 8988887653 58999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCccC-
Q 042392          179 LFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTLS-  242 (436)
Q Consensus       179 ~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~-  242 (436)
                      ........        ...+||.+.+...|+.++|+||+|+.+ .+.+       +......+..++.....+...... 
T Consensus       161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (346)
T 1ua2_A          161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL-AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD  239 (346)
T ss_dssp             TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH-HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred             eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence            76443211        123899987766688999999996544 3332       233445555555544332211000 


Q ss_pred             HHHHHHH----------HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          243 YDELRAG----------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       243 ~~eL~~~----------l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...+...          +..+....+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            0000000          001112334444555666778899999999888764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.3e-32  Score=255.63  Aligned_cols=248  Identities=19%  Similarity=0.230  Sum_probs=187.0

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |-+........+.|++.+.||+|+||.||+|++..+++.||||++......   .....+.+|+.+++.+ +||||++++
T Consensus        11 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~   86 (303)
T 3a7i_A           11 PGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---DEIEDIQQEITVLSQC-DSPYVTKYY   86 (303)
T ss_dssp             --CTTCEECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---TTHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             CchhcCCCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---HHHHHHHHHHHHHHhC-CCCCEeEEE
Confidence            333444556778899999999999999999999999999999999765432   2346788999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      +++.....+|+||||+++++|.+++.. +++++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~D  162 (303)
T 3a7i_A           87 GSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLAD  162 (303)
T ss_dssp             EEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECC
T ss_pred             EEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEee
Confidence            999999999999999999999998864 569999999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          174 FGSALLFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       174 FG~a~~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      ||++.........        ...+||.+.+ ..++.++|+||+|+.++ +.+..              ..+-......+
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g--------------~~p~~~~~~~~  226 (303)
T 3a7i_A          163 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAI-ELARG--------------EPPHSELHPMK  226 (303)
T ss_dssp             CTTCEECBTTBCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHH-HHHHS--------------SCTTTTSCHHH
T ss_pred             cccceecCccccccCccCCCcCccCHHHHhc-CCCCchhhhHHHHHHHH-HHccC--------------CCCCCCcCHHH
Confidence            9999876543211        1228888765 46788999999965443 32210              00111112222


Q ss_pred             HHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          246 LRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       246 L~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +...+..     +....+..-...+-+++..|+..|++..|.+..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          227 VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            2222221     112334444444555677888999999998765

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.9e-32  Score=258.21  Aligned_cols=179  Identities=25%  Similarity=0.318  Sum_probs=154.3

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|...+.||+|+||.||+|++..+|+.||||++.....    .....+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEE
Confidence            48888999999999999999999999999999875542    2345688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC
Q 042392          106 MELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG  185 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~  185 (436)
                      |||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++........
T Consensus       121 ~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          121 MEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             ECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC
T ss_pred             EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcc
Confidence            999999999998764 469999999999999999999999999999999999999   7788999999999987654321


Q ss_pred             C--------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          186 E--------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       186 ~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .        ...+||.+.+ ..|+.++|+||+|+.++
T Consensus       197 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~  232 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISR-SLYATEVDIWSLGIMVI  232 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHH
T ss_pred             ccccccCCccccCHhhhcC-CCCCchhhHHHHHHHHH
Confidence            1        1228888865 46788999999965543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.5e-32  Score=256.24  Aligned_cols=245  Identities=20%  Similarity=0.163  Sum_probs=169.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|++.+.||+|+||.||+|++..+++.||+|++......  ......+.++...++.+ +||||+++++++...+
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~   79 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTV-DCPFTVTFYGALFREG   79 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH--HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc--HHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccC
Confidence            45568999999999999999999999999999999998765332  22233344455556777 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          101 AVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      ..|+||||+++ +|.+++..    ...+++..++.++.|++.||.|||++ ||+||||||+||++   +.++.+||+|||
T Consensus        80 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg  155 (290)
T 3fme_A           80 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFG  155 (290)
T ss_dssp             SEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC-
T ss_pred             CEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecC
Confidence            99999999975 88777764    35699999999999999999999998 99999999999999   777899999999


Q ss_pred             CcccccccCC-------CCCCChHHH---HHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          176 SALLFEEEGG-------EASDDTSVI---LRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       176 ~a~~~~~~~~-------~~~~~pe~~---~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +|........       ....+||.+   .....++.++|+||+|+.++ +.+...            -...........
T Consensus       156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~------------~p~~~~~~~~~~  222 (290)
T 3fme_A          156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI-ELAILR------------FPYDSWGTPFQQ  222 (290)
T ss_dssp             --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH-HHHHTS------------CSSCCCSCHHHH
T ss_pred             CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH-HHHHCC------------CCccccCchHHH
Confidence            9987644322       123389987   34567889999999965543 322100            000011122233


Q ss_pred             HHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          246 LRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       246 L~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +...+....     ...+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          223 LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            333333211     1234444445556678888889999887764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.4e-32  Score=262.35  Aligned_cols=255  Identities=19%  Similarity=0.224  Sum_probs=185.7

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC-
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE-   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-   99 (436)
                      -.+..+|++.+.||+|+||.||+|++..+++.||||++.....   ......+.+|+.+++.+ +||||+++++++... 
T Consensus        23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~   98 (364)
T 3qyz_A           23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH---QTYCQRTLREIKILLRF-RHENIIGINDIIRAPT   98 (364)
T ss_dssp             CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC---HHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSS
T ss_pred             ccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC---cHHHHHHHHHHHHHHhc-CCCCCccceeEEecCC
Confidence            3455799999999999999999999999999999999875332   33456788999999999 699999999998755 


Q ss_pred             ----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392          100 ----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                          ..+|+||||+.+ +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        99 ~~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg  173 (364)
T 3qyz_A           99 IEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFG  173 (364)
T ss_dssp             TTTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred             ccccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCc
Confidence                469999999975 99998876 459999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCC
Q 042392          176 SALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       176 ~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~  237 (436)
                      +|.........           ...+||++.+...|+.++|+||+|+++ .+.+       +......+..+...+..++
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  252 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL-AEMLSNRPIFPGKHYLDQLNHILGILGSPS  252 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH-HHHHHSSCSSCCSSGGGHHHHHHHHHCSCC
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH-HHHHHCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            99876543221           123999988777789999999996554 3322       1222333333333333221


Q ss_pred             CCc---cCHHHHHHHHHh-----------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          238 NGT---LSYDELRAGLTK-----------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       238 ~g~---i~~~eL~~~l~~-----------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...   +...........           +....+.+-.+.+-+++..|++.|++..|.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            100   000000111111           112334444555666677788888888777654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=6.9e-33  Score=256.54  Aligned_cols=243  Identities=23%  Similarity=0.333  Sum_probs=182.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++.....   ......+.+|+.+++.+ +||||+++++++...+..
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQ   80 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEE
Confidence            45789999999999999999999999999999999875432   23446788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+||||+++++|.+++.....+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEE
T ss_pred             EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCC
Confidence            9999999999999999777779999999999999999999999999999999999999   6788999999999986543


Q ss_pred             cC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          183 EG----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       183 ~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      ..          .....+||.+.+...++.++|+||+|+.++ +.+...      .   .++...   .....+..+...
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~-~l~~g~------~---p~~~~~---~~~~~~~~~~~~  224 (276)
T 2yex_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT-AMLAGE------L---PWDQPS---DSCQEYSDWKEK  224 (276)
T ss_dssp             TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHH-HHHHSS------C---CCSCSC---TTSHHHHHHHTT
T ss_pred             CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHH-HHHhCC------C---CCCCCc---hHHHHHHHhhhc
Confidence            21          111238998876555688999999955543 322100      0   011110   011112222111


Q ss_pred             cC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 VG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..     ...+..-.+.+-+++..|++.|++..+.+..
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          225 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            10     1234444445555667888889988887653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=9e-33  Score=256.22  Aligned_cols=258  Identities=16%  Similarity=0.181  Sum_probs=175.2

Q ss_pred             CCcccCCCcccccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHH
Q 042392            1 MGCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR   80 (436)
Q Consensus         1 ~~~~~~~~~~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l   80 (436)
                      ||.+.+..+...    ...+....++|++.+.||+|+||.||+|.+  +|+.||||++....      ....+.+|+.++
T Consensus         1 mg~s~~~~~~~~----~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~~E~~~l   68 (278)
T 1byg_A            1 MGGSVAAQDEFY----RSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA------TAQAFLAEASVM   68 (278)
T ss_dssp             ------------------CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--------HHHHHTHHHH
T ss_pred             CCCCccchhhhh----hccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh------HHHHHHHHHHHH
Confidence            677666444322    234556678999999999999999999987  48899999986542      235688999999


Q ss_pred             HhcCCCCCeeeceeeeecC-CeEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           81 RLLSGQPNIVELKSAHEDE-TAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        81 ~~l~~h~niv~~~~~~~~~-~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                      +.+ +||||+++++++... +.+|+||||+++++|.+++...+.  +++..++.++.|++.||.|||++||+||||||+|
T Consensus        69 ~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  147 (278)
T 1byg_A           69 TQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN  147 (278)
T ss_dssp             TTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             HhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcce
Confidence            999 699999999986544 579999999999999999987543  8999999999999999999999999999999999


Q ss_pred             ceeeccCCCCcEEEEecCCcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          158 FCFISRDDNALLKVTDFGSALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       158 ill~~~~~~~~~kl~DFG~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                      |++   +.++.+||+|||++........     ....+||.+.+ ..++.++|+||+|+.++ +.++             
T Consensus       148 il~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~t-------------  209 (278)
T 1byg_A          148 VLV---SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLW-EIYS-------------  209 (278)
T ss_dssp             EEE---CTTSCEEECCCCC------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------
T ss_pred             EEE---eCCCcEEEeeccccccccccccCCCccccccCHHHhCC-CCCCchhcHHHHHHHHH-HHHh-------------
Confidence            999   7788999999999986654322     12338888865 46788999999965543 3221             


Q ss_pred             hCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          233 MDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ....+-...+..++...+..     .....+..-.+.+-+++..|++.|+++.+.+..+...
T Consensus       210 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          210 FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             TSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            00001111111222222211     1122333334445556778888899999988766543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.9e-32  Score=253.37  Aligned_cols=190  Identities=29%  Similarity=0.465  Sum_probs=157.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +.++|++.+.||+|+||.||+|++..+++.||+|++........  ......+.+|+.+++.+ +||||+++++++....
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCC
Confidence            45789999999999999999999999999999999976543221  12356789999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-CCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++...+ ....+||+|||++..
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            9999999999999999998888899999999999999999999999999999999999994211 123899999999987


Q ss_pred             ccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      .......       ...+||.+.+ ..++.++|+||+|+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~  202 (283)
T 3bhy_A          162 IEAGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY  202 (283)
T ss_dssp             CC--------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHH
T ss_pred             ccCCCcccccCCCcCccCcceecC-CCCCcchhhhhHHHHHH
Confidence            6543211       1238887765 46788999999965543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3.3e-32  Score=254.12  Aligned_cols=248  Identities=15%  Similarity=0.106  Sum_probs=184.1

Q ss_pred             ccccccceeeee-eecccCCeEEEEEEE--CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGR-MLGRGRFGVTYLCTE--NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ......+|++.+ .||+|+||.||+|.+  ..+++.||||++......  ......+.+|+.+++.+ +||||+++++++
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   87 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEANVMQQL-DNPYIVRMIGIC   87 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC--HHHHHHHHHHHHHHHhC-CCCCEEEEEEEE
Confidence            344567899998 999999999999954  567889999998765332  23456789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                       ..+.+|+||||+++++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus        88 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~  163 (291)
T 1xbb_A           88 -EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGL  163 (291)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTT
T ss_pred             -CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE---eCCCcEEEccCCc
Confidence             566789999999999999999988889999999999999999999999999999999999999   5678999999999


Q ss_pred             cccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          177 ALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       177 a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +........           ....+||.+.+ ..++.++|+||+|++++ +.++.             ...+-...+..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~~-------------g~~p~~~~~~~~  228 (291)
T 1xbb_A          164 SKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMW-EAFSY-------------GQKPYRGMKGSE  228 (291)
T ss_dssp             CEECCTTCSEEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHH-HHHTT-------------TCCSSTTCCHHH
T ss_pred             ceeeccCCCcccccccCCCCceeeChHHhcc-CCCChhhhHHHHHHHHH-HHHhc-------------CCCCCCCCCHHH
Confidence            987644221           11338888865 45788999999965543 32210             011111122333


Q ss_pred             HHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          246 LRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       246 L~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +...+..-     ....+..-.+.+-+++..|++.|+++.+.+..+...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          229 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            33333321     122344444455556778999999999988765443

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.7e-33  Score=264.23  Aligned_cols=249  Identities=23%  Similarity=0.303  Sum_probs=184.3

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcC-CCCCeeecee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS-GQPNIVELKS   94 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~-~h~niv~~~~   94 (436)
                      ...+.+.++|++.+.||+|+||.||+|++..+++.||||++........  ......+.+|+.+++.+. +||||+++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            4567788999999999999999999999999999999999976532210  011234568999999995 3699999999


Q ss_pred             eeecCCeEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           95 AHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      ++...+.+++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||+.  ..++.+||+|
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~D  193 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLID  193 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECC
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEee
Confidence            99999999999999976 89999999888899999999999999999999999999999999999993  1567999999


Q ss_pred             cCCcccccccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          174 FGSALLFEEEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       174 FG~a~~~~~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      ||++.........      ...+||.+.+...++.++|+||+|+.++ +.+...              .+-  -...++.
T Consensus       194 fg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~-el~~g~--------------~pf--~~~~~~~  256 (320)
T 3a99_A          194 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY-DMVCGD--------------IPF--EHDEEII  256 (320)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHH-HHHHSS--------------CSC--CSHHHHH
T ss_pred             CccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHH-HHHHCC--------------CCC--CChhhhh
Confidence            9999877543222      1228998887655688999999955543 322100              000  0001111


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .....+....+.+-.+.+-+++..|++.|+++.|.+..
T Consensus       257 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          257 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11011223344444455556677888889999888754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.3e-32  Score=261.27  Aligned_cols=243  Identities=19%  Similarity=0.203  Sum_probs=175.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceE----EEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPY----ACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...+|++.+.||+|+||.||+|++..+++.+    |+|.+.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   88 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASV-DNPHVCRLLGICLT   88 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHC-CBTTBCCEEEEEES
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEec
Confidence            4568999999999999999999998887765    6666543221   23456788999999999 69999999999987


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      .. .++|+||+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a  164 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLA  164 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTHH
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE---CCCCCEEEccCcce
Confidence            55 78999999999999999874 569999999999999999999999999999999999999   66789999999999


Q ss_pred             ccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +........          ...+||.+.+ ..|+.++|+||+|+.++ +.++             ....+-...+..++.
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt-------------~g~~p~~~~~~~~~~  229 (327)
T 3poz_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVW-ELMT-------------FGSKPYDGIPASEIS  229 (327)
T ss_dssp             HHHTTTCC-------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCGGGHH
T ss_pred             eEccCCcccccccCCCccccccChHHhcc-CCCCchhhhhhhHHHHH-HHHh-------------cCCCCccCCCHHHHH
Confidence            876443211          1238898876 56889999999965543 3221             001111112222333


Q ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          248 AGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       248 ~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+..-     ....+..-...+.+++..|+..|+++.|.+..+..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  275 (327)
T 3poz_A          230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             HHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            333321     12233344455566778888999999998876543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.2e-32  Score=264.32  Aligned_cols=255  Identities=17%  Similarity=0.219  Sum_probs=182.4

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      -.+..+|++.+.||+|+||.||+|.+..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++....
T Consensus        38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~  114 (371)
T 4exu_A           38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHM-QHENVIGLLDVFTPAS  114 (371)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCS
T ss_pred             ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc--hhHHHHHHHHHHHHHhc-CCCCchhhhhheeccC
Confidence            34678999999999999999999999999999999999765432  34456788999999999 6999999999998776


Q ss_pred             eE------EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          101 AV------HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       101 ~~------~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ..      |+||||+.+ +|.+++.  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus       115 ~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Df  188 (371)
T 4exu_A          115 SLRNFYDFYLVMPFMQT-DLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDF  188 (371)
T ss_dssp             SSTTCCCCEEEEECCCE-EHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECST
T ss_pred             CcccceeEEEEEccccc-cHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEec
Confidence            54      999999974 8888773  349999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC---
Q 042392          175 GSALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG---  239 (436)
Q Consensus       175 G~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g---  239 (436)
                      |+|+.......     ....+||.+.+...|+.++|+||+|++++ +.+       +......+..+......++..   
T Consensus       189 g~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~-el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  267 (371)
T 4exu_A          189 GLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA-EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  267 (371)
T ss_dssp             TCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHH-HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             CcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHH-HHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence            99987654322     12238999887667899999999965543 322       223334444444443332210   


Q ss_pred             ccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 TLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .+........+..+.           ...+..-.+.+-+++..|+..|++..|.+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            111111222222221           1224444445555667777777777776654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.8e-32  Score=260.25  Aligned_cols=243  Identities=16%  Similarity=0.164  Sum_probs=180.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceE--EEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPY--ACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~--aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .++|++.+.||+|+||.||+|++..++..+  |+|.+.....   ......+.+|+.+++.+.+||||+++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  100 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY  100 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc---hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence            368999999999999999999998888865  9998865322   23345688999999999669999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC
Q 042392          102 VHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD  165 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~  165 (436)
                      +|+||||+++|+|.+++....                .+++..++.++.||+.||.|||++||+||||||+||++   +.
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~  177 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GE  177 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CG
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cC
Confidence            999999999999999998654                68999999999999999999999999999999999999   67


Q ss_pred             CCcEEEEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCC
Q 042392          166 NALLKVTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~  238 (436)
                      ++.+||+|||+++.......       ....+||.+.+ ..++.++|+||+|+.+ .+.++             +...+-
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~ellt-------------~g~~pf  242 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLL-WEIVS-------------LGGTPY  242 (327)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHH-HHHHT-------------TSCCTT
T ss_pred             CCeEEEcccCcCccccccccccCCCCCccccChhhhcc-ccCCchhcchHHHHHH-HHHHc-------------CCCCCC
Confidence            78999999999975432211       12338888865 4678999999995544 33321             001111


Q ss_pred             CccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          239 GTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       239 g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...+..++...+..     .....+..-.+.+-+++..|++.|++..|.+..+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  296 (327)
T 1fvr_A          243 CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN  296 (327)
T ss_dssp             TTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            11122223222221     11123334444555567788888999999887654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=7e-33  Score=256.89  Aligned_cols=185  Identities=26%  Similarity=0.390  Sum_probs=147.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..++|++.+.||+|+||.||+|++..+++.||||++....... ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh-hhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeE
Confidence            4578999999999999999999999999999999986543211 22346788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+||||+++++|.+++... .++++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeecc
Confidence            9999999999999999875 569999999999999999999999999999999999999   778899999999998765


Q ss_pred             ccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          182 EEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       182 ~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ....        ....+||.+.+ ..++.++|+||+|+.+
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  202 (278)
T 3cok_A          164 MPHEKHYTLCGTPNYISPEIATR-SAHGLESDVWSLGCMF  202 (278)
T ss_dssp             -----------------------------CTHHHHHHHHH
T ss_pred             CCCCcceeccCCCCcCCcchhcC-CCCCchhhHHHHHHHH
Confidence            3221        12238887765 5678999999996544

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.3e-32  Score=259.50  Aligned_cols=259  Identities=20%  Similarity=0.225  Sum_probs=191.1

Q ss_pred             ccccccceeeeeeecccCCeEEEEEE----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCT----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSA   95 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   95 (436)
                      ......+|++.+.||+|+||.||+|+    +..+++.||||++....    ......+.+|+.+++.+ +||||++++++
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~  110 (326)
T 2w1i_A           36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSL-QHDNIVKYKGV  110 (326)
T ss_dssp             -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhC-CCCCeeeEEEE
Confidence            44556789999999999999999998    45689999999987543    23456789999999999 69999999998


Q ss_pred             eecCC--eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           96 HEDET--AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        96 ~~~~~--~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +...+  .+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+
T Consensus       111 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kL~  187 (326)
T 2w1i_A          111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIG  187 (326)
T ss_dssp             ECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEEC
T ss_pred             EEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---cCCCcEEEe
Confidence            86654  789999999999999999876 459999999999999999999999999999999999999   567899999


Q ss_pred             ecCCcccccccCC-------C----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhH-HHHHHHhhhhCCCCCC
Q 042392          173 DFGSALLFEEEGG-------E----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEET-QALKEKFIEMDTDKNG  239 (436)
Q Consensus       173 DFG~a~~~~~~~~-------~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~-~~l~~~F~~~D~~~~g  239 (436)
                      |||++........       .    ...+||.+.+ ..++.++|+||+|+++ .+.++ .... ............+..+
T Consensus       188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il-~el~tg~~~~~~~~~~~~~~~~~~~~~  265 (326)
T 2w1i_A          188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVL-YELFTYIEKSKSPPAEFMRMIGNDKQG  265 (326)
T ss_dssp             CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHH-HHHHHTTCGGGSHHHHHHHHHCTTCCT
T ss_pred             cCcchhhccccccccccccCCCCceeEECchhhcC-CCCCchhhHHHHHHHH-HHHHhcCCCCCCCHHHHHHhhccccch
Confidence            9999987654321       0    1238998876 4678899999995554 33331 1100 0111222334444444


Q ss_pred             ccCHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          240 TLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .....++...+..-.     ...+.+-.+.+-+++..|++.|+++.|.+..+..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          266 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            444555555544321     2233444444555677889999999998876543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.6e-32  Score=269.38  Aligned_cols=245  Identities=20%  Similarity=0.255  Sum_probs=181.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      ...+|++.+.||+|+||.||+|++..+|+.||||++.....        ...+|+.+|+.+ +||||+++++++...   
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l-~hpniv~l~~~~~~~~~~  122 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEK  122 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTC-CCTTBCCEEEEEEEEETT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHc-CCCCccceeeEEeccCCC
Confidence            34579999999999999999999999999999999865432        134799999999 699999999988532   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392          100 ---TAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       100 ---~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                         ..+++||||+++ +|.+.+..    ...+++..++.++.||+.||.|||++||+||||||+|||+.  ...+.+||+
T Consensus       123 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~  199 (420)
T 1j1b_A          123 KDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC  199 (420)
T ss_dssp             TTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEEC
T ss_pred             CcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEec
Confidence               247799999986 77776653    35699999999999999999999999999999999999993  134678999


Q ss_pred             ecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC
Q 042392          173 DFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       173 DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~  238 (436)
                      |||+|+.+......       ...+||++.+...|+.++|+||+|+ ++.+.+       +......+..++..+..+  
T Consensus       200 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~-il~ell~G~~pf~~~~~~~~l~~i~~~lg~p--  276 (420)
T 1j1b_A          200 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC-VLAELLLGQPIFPGDSGVDQLVEIIKVLGTP--  276 (420)
T ss_dssp             CCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHH-HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSC--
T ss_pred             cchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHH-HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC--
Confidence            99999876443221       2239999987667899999999954 444433       233445555555554432  


Q ss_pred             CccCHHHHHHH-----------------HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          239 GTLSYDELRAG-----------------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 g~i~~~eL~~~-----------------l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                         ..+.+...                 -..+....+.+-.+.+-+.+..|+..|++..|.+.+
T Consensus       277 ---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          277 ---TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             ---CHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ---CHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence               22222211                 011222334555566666778888999999887754

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=4.2e-32  Score=267.05  Aligned_cols=185  Identities=21%  Similarity=0.288  Sum_probs=156.0

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-----CCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-----GQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~   93 (436)
                      +...+..+|++.+.||+|+||.||+|.+..+++.||||++...     ......+.+|+.+++.+.     +||||++++
T Consensus        91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~  165 (429)
T 3kvw_A           91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHML  165 (429)
T ss_dssp             TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEE
T ss_pred             CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEE
Confidence            4456778999999999999999999999999999999998653     233456778888888874     578999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc--E
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL--L  169 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~--~  169 (436)
                      +++...+.+|+||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.  +
T Consensus       166 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl---~~~~~~~v  241 (429)
T 3kvw_A          166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL---KQQGRSGI  241 (429)
T ss_dssp             EEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE---SSTTSCCE
T ss_pred             eecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---ccCCCcce
Confidence            99999999999999996 59999998764  48999999999999999999999999999999999999   55555  9


Q ss_pred             EEEecCCcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          170 KVTDFGSALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       170 kl~DFG~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|||+|.........     ...|||++.+. .|+.++|+||+|+++
T Consensus       242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il  289 (429)
T 3kvw_A          242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGA-RYGMPIDMWSLGCIL  289 (429)
T ss_dssp             EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTB-CCCTHHHHHHHHHHH
T ss_pred             EEeecccceecCCcccccCCCCCccChHHHhCC-CCCchHHHHhHHHHH
Confidence            99999999765443222     12399998874 588999999995554

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.5e-32  Score=259.32  Aligned_cols=250  Identities=16%  Similarity=0.132  Sum_probs=181.9

Q ss_pred             cccccccceeeeeeecccCCeEEEEEE-----ECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      ..+...++|++.+.||+|+||.||+|+     +..+++.||||++.....   ......+.+|+.+++.+ +||||++++
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~   99 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---EQDELDFLMEALIISKF-NHQNIVRCI   99 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC---HHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc---hhhHHHHHHHHHHHhhC-CCCCCCeEE
Confidence            345677899999999999999999999     556788999999864432   33455788999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG-------YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      +++......|+||||+++++|.+++....       .+++..++.++.||+.||.|||++||+||||||+||++...+..
T Consensus       100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~  179 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG  179 (327)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCc
Confidence            99999999999999999999999998753       38899999999999999999999999999999999999543355


Q ss_pred             CcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC
Q 042392          167 ALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD  236 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~  236 (436)
                      ..+||+|||++........          ....+||.+.+ ..|+.++|+||+|+.++ +.++             ....
T Consensus       180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt-------------~g~~  244 (327)
T 2yfx_A          180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLW-EIFS-------------LGYM  244 (327)
T ss_dssp             CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCC
T ss_pred             ceEEECccccccccccccccccCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHH-HHHc-------------CCCC
Confidence            6799999999975533211          12338998866 46889999999965543 3221             0111


Q ss_pred             CCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          237 KNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +-...+..++...+..-     ....+..-.+.+-+++..|+..|+++.+.+..+.
T Consensus       245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~  300 (327)
T 2yfx_A          245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE  300 (327)
T ss_dssp             SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            11112233333333221     1233444444555567788889999999887653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=7.7e-33  Score=262.64  Aligned_cols=244  Identities=17%  Similarity=0.154  Sum_probs=179.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCce----EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMP----YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...+|++.+.||+|+||.||+|++..+++.    ||+|.+......   .....+.+|+.+++.+ +||||+++++++. 
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-   85 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR---QSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-   85 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC---SCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH---HHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-
Confidence            346899999999999999999999888876    666665433211   1223467899999999 6999999999986 


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ....++||||+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a  162 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVA  162 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGG
T ss_pred             CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcc
Confidence            45689999999999999999874 469999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +........          ...+||.+.+ ..|+.++|+||+|++++ +.++             ....+-......++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-el~~-------------~g~~p~~~~~~~~~~  227 (325)
T 3kex_A          163 DLLPPDDKQLLYSEAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVW-ELMT-------------FGAEPYAGLRLAEVP  227 (325)
T ss_dssp             GGSCCCTTCCC-----CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTSCTTHHH
T ss_pred             cccCcccccccccCCCCcccccChHHhcc-CCCChhhHhHHhHHHHH-HHHh-------------CCCCCccccCHHHHH
Confidence            876543221          2338888875 46889999999965543 3221             011111112222333


Q ss_pred             HHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          248 AGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       248 ~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ..+....     ...+.+-...+.+++..|+..|+++.|.+..+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          228 DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             HHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3333211     11222234455567788899999999998876543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.9e-33  Score=265.57  Aligned_cols=250  Identities=25%  Similarity=0.339  Sum_probs=181.4

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      .....+..+|++.+.||+|+||.||+|.+..+++.||+|++....... .......+.+|+.+++.+ +||||+++++++
T Consensus        19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~   97 (345)
T 3hko_A           19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVY   97 (345)
T ss_dssp             BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhh
Confidence            344567789999999999999999999999999999999987542211 123456789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc----------------------------------------CCCCHHHHHHHHHHH
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK----------------------------------------GYYSERDAAPVLRAI  136 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~----------------------------------------~~~~~~~~~~~~~qi  136 (436)
                      ...+.+|+|||||+||+|.+++...                                        ..+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            9999999999999999999988420                                        013577888999999


Q ss_pred             HHHHHHHHHcCcccccCCCCcceeeccCCCC--cEEEEecCCcccccccCC------------CCCCChHHHHHH-HHHH
Q 042392          137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNA--LLKVTDFGSALLFEEEGG------------EASDDTSVILRM-KQFR  201 (436)
Q Consensus       137 ~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~--~~kl~DFG~a~~~~~~~~------------~~~~~pe~~~~~-~~~~  201 (436)
                      +.||.|||+.||+||||||+||++   +.++  .+||+|||+|..+.....            ....+||.+.+. ..|+
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  254 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLF---STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG  254 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEE---SCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC
T ss_pred             HHHHHHHHHCCccccCCChhhEEE---ecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC
Confidence            999999999999999999999999   4444  899999999987643211            112289988643 4678


Q ss_pred             HhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC-------CCCCHHHHHHHHHHHcCCCC
Q 042392          202 RMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-------SMLTEFDVKQLMEAADMDGN  274 (436)
Q Consensus       202 ~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~-------~~~s~~~i~~l~~~~d~d~~  274 (436)
                      .++|+||+|++++ +.+...             .+-.+.-..+.+...+....       ...+..-.+.+-+++..|+.
T Consensus       255 ~~~DiwslG~il~-el~~g~-------------~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          255 PKCDAWSAGVLLH-LLLMGA-------------VPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             THHHHHHHHHHHH-HHHHSS-------------CSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred             cHHHHHHHHHHHH-HHHHCC-------------CCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChh
Confidence            8999999965543 322100             00111111122222222111       01334444555566788889


Q ss_pred             CcccHHHHHHH
Q 042392          275 GAIDYTEFTAA  285 (436)
Q Consensus       275 g~i~~~EF~~~  285 (436)
                      .|++..+.+..
T Consensus       321 ~Rps~~~~l~h  331 (345)
T 3hko_A          321 ERFDAMRALQH  331 (345)
T ss_dssp             TSCCHHHHHHS
T ss_pred             HCCCHHHHhcC
Confidence            99999888764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=6.8e-33  Score=263.24  Aligned_cols=193  Identities=22%  Similarity=0.377  Sum_probs=160.8

Q ss_pred             ccccccccceeee-eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           18 KPYEDVMLHYSFG-RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        18 ~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...+.+..+|.+. +.||+|+||.||+|++..+++.||+|++.......  .....+.+|+.+++.+.+||||+++++++
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ--DCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE--ECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch--HHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            4567788899998 89999999999999999999999999987654322  33567889999999997789999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ...+.+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||++......+.+||+||
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence            9999999999999999999988653  56999999999999999999999999999999999999943333789999999


Q ss_pred             CCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          175 GSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       175 G~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|+........       ...+||.+.+ ..|+.++|+||+|+++
T Consensus       179 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  223 (327)
T 3lm5_A          179 GMSRKIGHACELREIMGTPEYLAPEILNY-DPITTATDMWNIGIIA  223 (327)
T ss_dssp             GGCEEC---------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             ccccccCCccccccccCCcCccCCeeecC-CCCCchhhHHHHHHHH
Confidence            999876543221       1238888765 4678899999996554

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=3.8e-32  Score=250.90  Aligned_cols=244  Identities=22%  Similarity=0.261  Sum_probs=167.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      -..+|++.+.||+|+||.||+|.+.  +..||||++..............+.+|+.+++.+ +||||+++++++...+.+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--C
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCce
Confidence            3578999999999999999999974  8899999987654333233456788999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---cccccCCCCcceeeccC-----CCCcEEEEec
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG---VMHRDLKPENFCFISRD-----DNALLKVTDF  174 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~Hrdlkp~Nill~~~~-----~~~~~kl~DF  174 (436)
                      |+||||+++++|.+++. ..++++..++.++.|++.||.|||++|   |+||||||+||++....     .++.+||+||
T Consensus        82 ~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999988885 456999999999999999999999999   89999999999994311     2678999999


Q ss_pred             CCcccccccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          175 GSALLFEEEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       175 G~a~~~~~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      |++.........      ...+||.+.+ ..++.++|+||+|+.++ +.+..              ..+-...+..+...
T Consensus       161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~-~l~~g--------------~~p~~~~~~~~~~~  224 (271)
T 3dtc_A          161 GLAREWHRTTKMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLW-ELLTG--------------EVPFRGIDGLAVAY  224 (271)
T ss_dssp             CC-------------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHH-HHHHC--------------CCTTTTSCHHHHHH
T ss_pred             CcccccccccccCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHH-HHHhC--------------CCCCCCCCHHHHHH
Confidence            999876543221      1228888865 46889999999966543 32210              00000011111111


Q ss_pred             HHHh------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          249 GLTK------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       249 ~l~~------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....      .....+..-.+.+-+++..|+..|+++.|.+..+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L  268 (271)
T 3dtc_A          225 GVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL  268 (271)
T ss_dssp             HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence            1111      1122233334445556777888899998888765

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.2e-32  Score=255.14  Aligned_cols=242  Identities=15%  Similarity=0.178  Sum_probs=180.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----   98 (436)
                      ....|++.+.||+|+||.||+|.+..++..||+|++......  ......+.+|+.+++.+ +||||+++++++..    
T Consensus        24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~  100 (290)
T 1t4h_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSS
T ss_pred             CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCC
Confidence            344589999999999999999999999999999998765433  24456788999999999 69999999998865    


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ...+|+||||+++++|.+++...+.+++..++.++.||+.||.|||+.+  |+||||||+||++.  ..++.+||+|||+
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGL  178 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTG
T ss_pred             CceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCC
Confidence            4568999999999999999998888999999999999999999999999  99999999999993  2678999999999


Q ss_pred             cccccccC------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          177 ALLFEEEG------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       177 a~~~~~~~------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      |.......      .....+||.+.+  .++.++|+||+|+.++ +.+...             .+-.+.....++...+
T Consensus       179 ~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~-~l~~g~-------------~pf~~~~~~~~~~~~~  242 (290)
T 1t4h_A          179 ATLKRASFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCML-EMATSE-------------YPYSECQNAAQIYRRV  242 (290)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHH-HHHHSS-------------CTTTTCSSHHHHHHHH
T ss_pred             cccccccccccccCCcCcCCHHHHhc--cCCCcchHHHHHHHHH-HHHhCC-------------CCCCCcCcHHHHHHHH
Confidence            97654432      122338997754  5889999999965543 322100             0111112222222222


Q ss_pred             Hh------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TK------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..      +....+.+-.+.+-+++..|++.|+++.|.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          243 TSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            21      111223333444555677888889998887753

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.6e-32  Score=256.27  Aligned_cols=247  Identities=18%  Similarity=0.227  Sum_probs=180.3

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTN----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ..+....+|++.+.||+|+||.||+|.+..++    ..||||++.....   ......+.+|+.+++.+ +||||+++++
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~  113 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---EKQRVDFLGEAGIMGQF-SHHNIIRLEG  113 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC---HHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence            34556678999999999999999999987553    4599999875432   23455788999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      ++...+.+|+||||+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|
T Consensus       114 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~D  190 (333)
T 1mqb_A          114 VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSD  190 (333)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECC
T ss_pred             EEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECC
Confidence            999999999999999999999999875 569999999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          174 FGSALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       174 FG~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      ||++.........           ...+||.+.+ ..++.++|+||+|++++ +.+.             ....+-...+
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt-------------~g~~pf~~~~  255 (333)
T 1mqb_A          191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMW-EVMT-------------YGERPYWELS  255 (333)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCC
T ss_pred             CCcchhhccccccccccCCCCccccccCchhccc-CCCCchhhhHHHHHHHH-HHHc-------------CCCCCcccCC
Confidence            9999876542211           1338888865 46788999999965544 2221             0011111122


Q ss_pred             HHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          243 YDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       243 ~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ..++...+..-     ....+..-.+.+-+++..|++.|+++.+.+..+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~  305 (333)
T 1mqb_A          256 NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD  305 (333)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            33333333221     1123334344455567788999999999887653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8.3e-32  Score=248.43  Aligned_cols=246  Identities=11%  Similarity=0.098  Sum_probs=182.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .++...++|++.+.||+|+||.||+|++.  +..||||++......  ......+.+|+.+++.+ +||||+++++++..
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   78 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWS--TRKSRDFNEECPRLRIF-SHPNVLPVLGACQS   78 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCC--HHHHHHHHHHGGGGCCC-SCTTEECEEEEECT
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccC--HHHHHHHHHHHHHHHhc-CCCchhheEEEEcc
Confidence            34556789999999999999999999984  889999999765433  24456789999999999 69999999999988


Q ss_pred             C--CeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEEE
Q 042392           99 E--TAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ~--~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      .  ..+++||||+++|+|.+++....  .+++..++.++.|++.||.|||+++  |+||||||+||++   +.++.++|+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~  155 (271)
T 3kmu_A           79 PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARIS  155 (271)
T ss_dssp             TTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEE
T ss_pred             CCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEE
Confidence            7  78999999999999999998765  4899999999999999999999999  9999999999999   778899999


Q ss_pred             ecCCcccccccCCCC---CCChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          173 DFGSALLFEEEGGEA---SDDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       173 DFG~a~~~~~~~~~~---~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |||++..........   ..+||.+.+.  ..++.++|+||+|+.++ +.++.              ..+-...+..+..
T Consensus       156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~-el~~g--------------~~p~~~~~~~~~~  220 (271)
T 3kmu_A          156 MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW-ELVTR--------------EVPFADLSNMEIG  220 (271)
T ss_dssp             GGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHH-HHHHC--------------SCTTTTSCHHHHH
T ss_pred             eccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHH-HHHhC--------------CCCccccChHHHH
Confidence            998887654433222   2389998763  23455899999955543 32210              0010111122221


Q ss_pred             -HHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          248 -AGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       248 -~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                       .....     +....+.+-.+.+-+++..|++.|+++.+.+..+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~  266 (271)
T 3kmu_A          221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE  266 (271)
T ss_dssp             HHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence             11111     11233444444555567788888999988887654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.8e-32  Score=249.07  Aligned_cols=243  Identities=16%  Similarity=0.198  Sum_probs=182.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..-.++|++.+.||+|+||.||+|.+. +++.||+|++......     ...+.+|+.+++.+ +||||+++++++...+
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-----~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   76 (267)
T 3t9t_A            4 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-----EEDFIEEAEVMMKL-SHPKLVQLYGVCLEQA   76 (267)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC-----HHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred             EEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC-----HHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence            334578999999999999999999986 6788999999765432     35688999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+||||+++++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++..
T Consensus        77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~  153 (267)
T 3t9t_A           77 PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRF  153 (267)
T ss_dssp             SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGG
T ss_pred             CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEcccccccc
Confidence            999999999999999999875 458999999999999999999999999999999999999   6778999999999987


Q ss_pred             ccccC-----CC----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          180 FEEEG-----GE----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       180 ~~~~~-----~~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      .....     ..    ...+||.+.+ ..++.++|+||+|+.++ +.++.             ...+-...+..++...+
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~~-------------g~~p~~~~~~~~~~~~i  218 (267)
T 3t9t_A          154 VLDDQYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMW-EVFSE-------------GKIPYENRSNSEVVEDI  218 (267)
T ss_dssp             BCCHHHHSTTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------SCCTTTTCCHHHHHHHH
T ss_pred             cccccccccccccccccccChhhhcC-CCccchhchhhhHHHHH-HHhcc-------------CCCCCCCCCHHHHHHHH
Confidence            64311     11    1338888865 46788999999965543 32210             00111112223333222


Q ss_pred             Hhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          251 TKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       251 ~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..-     ....+..-.+.+-+++..|+..|+++.+.+..+..
T Consensus       219 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          219 STGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            221     11223333344445667888899999998877643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.5e-32  Score=267.50  Aligned_cols=248  Identities=18%  Similarity=0.268  Sum_probs=178.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+....+|++.+.||+|+||.||+|++..++. ||+|++......        ..+|+.+++.+ +||||+++++++..
T Consensus        34 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~--------~~~E~~il~~l-~h~niv~l~~~~~~  103 (394)
T 4e7w_A           34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF--------KNRELQIMRIV-KHPNVVDLKAFFYS  103 (394)
T ss_dssp             SCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS--------CCHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             CCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch--------HHHHHHHHHhC-CCCCcceEEEEEEe
Confidence            445567789999999999999999999987665 888887654322        23799999999 69999999999854


Q ss_pred             CC------eEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCc
Q 042392           99 ET------AVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus        99 ~~------~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                      .+      .+|+|||||++ ++...+..    ...+++..++.++.||+.||.|||++||+||||||+|||+.  ..++.
T Consensus       104 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~  180 (394)
T 4e7w_A          104 NGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGV  180 (394)
T ss_dssp             ESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTE
T ss_pred             cCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCc
Confidence            43      38999999987 55554442    45699999999999999999999999999999999999993  16789


Q ss_pred             EEEEecCCcccccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhC
Q 042392          169 LKVTDFGSALLFEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMD  234 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D  234 (436)
                      +||+|||+|+.........       ..|||.+.+...|+.++|+||+|+. +.+.+       +......+..+...+.
T Consensus       181 ~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i-l~ell~g~~pf~~~~~~~~l~~i~~~~g  259 (394)
T 4e7w_A          181 LKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCV-MAELMQGQPLFPGESGIDQLVEIIKVLG  259 (394)
T ss_dssp             EEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH-HHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHH-HHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            9999999998764433221       2399999876678999999999554 43432       2233444455544443


Q ss_pred             CCCCCccCHHHHHHHHH-----------------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          235 TDKNGTLSYDELRAGLT-----------------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~-----------------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .+     +.+.+...-.                 .+....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       260 ~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          260 TP-----SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CC-----CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CC-----CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            32     2222222110                 1112244444555666677788888888777653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=8.9e-32  Score=252.29  Aligned_cols=180  Identities=16%  Similarity=0.239  Sum_probs=147.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHh--cCCCCCeeeceeeeec
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL--LSGQPNIVELKSAHED   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~niv~~~~~~~~   98 (436)
                      ..+.++|++.+.||+|+||.||+|++  +++.||||++...       ......+|.+++..  + +||||+++++++..
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~   73 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-------DEKSWFRETELYNTVML-RHENILGFIASDMT   73 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-------cchhhHHHHHHHHHhhc-cCcCeeeEEEeecc
Confidence            45678999999999999999999987  6899999998643       23445667777776  6 69999999998643


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCcccccCCCCcceeeccCCC
Q 042392           99 ----ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH--------SMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        99 ----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH--------~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                          ...+|+||||+++|+|.+++.. ..+++..++.++.|++.||.|||        +.+|+||||||+|||+   +.+
T Consensus        74 ~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~  149 (301)
T 3q4u_A           74 SRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKN  149 (301)
T ss_dssp             EETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTT
T ss_pred             ccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCC
Confidence                3568999999999999999954 46999999999999999999999        9999999999999999   778


Q ss_pred             CcEEEEecCCcccccccCC------------CCCCChHHHHHHH-----HHHHhhhhhhHHHHHH
Q 042392          167 ALLKVTDFGSALLFEEEGG------------EASDDTSVILRMK-----QFRRMSKLKKLTVKVI  214 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~------------~~~~~pe~~~~~~-----~~~~~~d~~s~~~~~~  214 (436)
                      +.+||+|||+|+.......            ....|||.+.+..     .++.++|+||+|++++
T Consensus       150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~  214 (301)
T 3q4u_A          150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW  214 (301)
T ss_dssp             SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence            8999999999976543221            1122899887642     5778999999955543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=8.5e-32  Score=258.35  Aligned_cols=257  Identities=22%  Similarity=0.269  Sum_probs=191.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ....+.++|++.+.||+|+||.||+|++..+|+.||||++.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         5 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   80 (353)
T 2b9h_A            5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK---PLFALRTLREIKILKHF-KHENIITIFNIQRP   80 (353)
T ss_dssp             CCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS---HHHHHHHHHHHHHHHHC-CCTTBCCEEEECCC
T ss_pred             cccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc---chHHHHHHHHHHHHHhC-cCCCcCCeeeeecc
Confidence            345677899999999999999999999999999999999864322   34456678999999999 69999999998765


Q ss_pred             C-----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           99 E-----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        99 ~-----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      .     ..+|+||||+.+ +|.+++.. +.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|
T Consensus        81 ~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~D  155 (353)
T 2b9h_A           81 DSFENFNEVYIIQELMQT-DLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCD  155 (353)
T ss_dssp             SCSTTCCCEEEEECCCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECC
T ss_pred             cccCccceEEEEEeccCc-cHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEe
Confidence            4     679999999975 99998876 569999999999999999999999999999999999999   7788999999


Q ss_pred             cCCcccccccCC------------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHH
Q 042392          174 FGSALLFEEEGG------------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKE  228 (436)
Q Consensus       174 FG~a~~~~~~~~------------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~  228 (436)
                      ||+|........                  ....+||++.+...++.++|+||+|+.+ .+.+       +......+..
T Consensus       156 fg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~~~~~~~~  234 (353)
T 2b9h_A          156 FGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRPIFPGRDYRHQLLL  234 (353)
T ss_dssp             CTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHH-HHHHHSSCSCCCSSHHHHHHH
T ss_pred             cccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHH-HHHHhCCCCCCCCCcHHHHHH
Confidence            999987653211                  1123899887766789999999996554 3322       2223334444


Q ss_pred             HhhhhCCCCC----CccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          229 KFIEMDTDKN----GTLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       229 ~F~~~D~~~~----g~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ++..+..+..    ..+........+..+.           ...+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            4444433221    1122222333333221           2345555566666778888899998887754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=8.4e-32  Score=259.57  Aligned_cols=186  Identities=18%  Similarity=0.210  Sum_probs=145.9

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC-----CceEEEEEeecCCccchh-------hHHHHHHHHHHHHHhcCCCCCeee
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST-----NMPYACKSMAKKPKMKYA-------ENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      ..+|++.+.||+|+||.||+|.+..+     ++.||||++.........       .......+|+..++.+ +||||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~  112 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPK  112 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCe
Confidence            34899999999999999999998764     588999998765421100       0011233455566667 5999999


Q ss_pred             ceeeeecC----CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392           92 LKSAHEDE----TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        92 ~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      +++++...    ..+|+||||| |++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+.. +.+
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~~  190 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNP  190 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SCT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CCC
Confidence            99998764    5589999999 88999999876 56999999999999999999999999999999999999942 267


Q ss_pred             CcEEEEecCCcccccccC---------------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          167 ALLKVTDFGSALLFEEEG---------------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~---------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +.+||+|||+|+.+....               .....+||.+.+ ..|+.++|+||+|+++
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l  251 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG-VAPSRRGDLEILGYCM  251 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT-CCCCHHHHHHHHHHHH
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC-CCCCchhhHHHHHHHH
Confidence            899999999998764421               112238998876 4588999999996654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.4e-34  Score=276.06  Aligned_cols=192  Identities=18%  Similarity=0.161  Sum_probs=148.2

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc----chhhHHHHHHHHHHHHHhcC--------CC---
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM----KYAENDMMIRREIQIRRLLS--------GQ---   86 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~--------~h---   86 (436)
                      ...++|++.+.||+|+||.||+|++  +|+.||||++......    ........+.+|+.+++.+.        +|   
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            4467899999999999999999998  6899999999876422    11223466889999998884        25   


Q ss_pred             --------------CCeeeceeeeec-------------CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHH
Q 042392           87 --------------PNIVELKSAHED-------------ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNA  139 (436)
Q Consensus        87 --------------~niv~~~~~~~~-------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~  139 (436)
                                    |||++++++|..             .+.+|+|||||++|++.+.+.+ +.+++..++.++.||+.|
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence                          455555555544             6889999999999987776644 568999999999999999


Q ss_pred             HHHHH-HcCcccccCCCCcceeeccC-----------------CCCcEEEEecCCcccccccC---CCCCCChHHHHHHH
Q 042392          140 VNVCH-SMGVMHRDLKPENFCFISRD-----------------DNALLKVTDFGSALLFEEEG---GEASDDTSVILRMK  198 (436)
Q Consensus       140 l~~lH-~~~i~Hrdlkp~Nill~~~~-----------------~~~~~kl~DFG~a~~~~~~~---~~~~~~pe~~~~~~  198 (436)
                      |.||| ++||+||||||+|||+...+                 ....+||+|||+|+......   .....|||++.+..
T Consensus       174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~  253 (336)
T 2vuw_A          174 LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG  253 (336)
T ss_dssp             HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS
T ss_pred             HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC
Confidence            99999 99999999999999995321                 11289999999999775432   22334999988643


Q ss_pred             HHHHhhhhhhHHHHHHHhcC
Q 042392          199 QFRRMSKLKKLTVKVIVEYL  218 (436)
Q Consensus       199 ~~~~~~d~~s~~~~~~~~~l  218 (436)
                        +.++|+||++++.....+
T Consensus       254 --~~~~Diwsl~~~~~~~~~  271 (336)
T 2vuw_A          254 --DYQFDIYRLMKKENNNRW  271 (336)
T ss_dssp             --SHHHHHHHHHHHHHTTCT
T ss_pred             --ccceehhhhhCCCCcccc
Confidence              778999999665444333

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.3e-32  Score=263.24  Aligned_cols=187  Identities=16%  Similarity=0.165  Sum_probs=147.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECC---CCceEEEEEeecCCccchh-------hHHHHHHHHHHHHHhcCCCCCeee
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYA-------ENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      ...++|++.+.||+|+||.||+|.+..   ++..||||++.........       .....+.+|+.+++.+ +||||++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~  112 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPL  112 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcce
Confidence            345689999999999999999999987   7899999998765422100       0112356788899999 6999999


Q ss_pred             ceeeeec----CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCC
Q 042392           92 LKSAHED----ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA  167 (436)
Q Consensus        92 ~~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~  167 (436)
                      +++++..    ...+|+||||| +++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+.   .++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~  188 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG---YKN  188 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---SSS
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc---cCC
Confidence            9999887    78899999999 889999998877899999999999999999999999999999999999994   444


Q ss_pred             --cEEEEecCCcccccccC---------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          168 --LLKVTDFGSALLFEEEG---------------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       168 --~~kl~DFG~a~~~~~~~---------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        .+||+|||+|+.+....               .....|||.+.+ ..|+.++|+||+|++++
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~  251 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG-VALSRRSDVEILGYCML  251 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT-CCCCHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC-CCCCchhhHHHHHHHHH
Confidence              99999999998764321               112238998876 46889999999965543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6.2e-32  Score=251.70  Aligned_cols=246  Identities=17%  Similarity=0.158  Sum_probs=178.1

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhH---HHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN---DMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++...........   ...+.+|+.+++.+ +||||+++++++..
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHN   94 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecC
Confidence            455789999999999999999999999999999999876543321111   15788999999999 69999999999977


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCc-----EE
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNAL-----LK  170 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~-----~k  170 (436)
                      ..  ++||||+++|+|.+++.... .+++..++.++.|++.||.|||++|  |+||||||+||++   +.++.     +|
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~---~~~~~~~~~~~k  169 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL---QSLDENAPVCAK  169 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEE---SCCCTTCSCCEE
T ss_pred             CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEE---eccCCCCceeEE
Confidence            65  79999999999999887654 5999999999999999999999999  9999999999999   44444     99


Q ss_pred             EEecCCcccccccCC-----CCCCChHHHHH-HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          171 VTDFGSALLFEEEGG-----EASDDTSVILR-MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       171 l~DFG~a~~~~~~~~-----~~~~~pe~~~~-~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      |+|||+|+.......     ....+||.+.+ ...|+.++|+||+|++++ +.+...      ..|   +...   ....
T Consensus       170 l~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~-~l~~g~------~pf---~~~~---~~~~  236 (287)
T 4f0f_A          170 VADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-TILTGE------GPF---DEYS---YGKI  236 (287)
T ss_dssp             ECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHH-HHHHSS------CTT---TTCC---CCHH
T ss_pred             eCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHH-HHHcCC------CCC---cccc---ccHH
Confidence            999999986544321     12238888732 345788999999965543 322100      001   1111   1111


Q ss_pred             HHHHHHHhc------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLTKV------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~~~------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+.......      ....+.+-.+.+-+++..|+..|+++.|.+..+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  284 (287)
T 4f0f_A          237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL  284 (287)
T ss_dssp             HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            122222221      122333334444456778888899998888665

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=4.4e-32  Score=274.18  Aligned_cols=245  Identities=18%  Similarity=0.213  Sum_probs=184.6

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...|+...++|++.+.||+|+||.||+|.+.. +..||||++.....     ....+.+|+.+|+.+ +||||+++++++
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~hpniv~~~~~~  331 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-----SPEAFLQEAQVMKKL-RHEKLVQLYAVV  331 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS-----CHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC-----CHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            45678888999999999999999999999865 46799999976432     235688999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      .. ..+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+||
T Consensus       332 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DF  407 (535)
T 2h8h_A          332 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADF  407 (535)
T ss_dssp             CS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCT
T ss_pred             ee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEccc
Confidence            76 6789999999999999999753  459999999999999999999999999999999999999   67789999999


Q ss_pred             CCcccccccC-----C----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          175 GSALLFEEEG-----G----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       175 G~a~~~~~~~-----~----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+++......     .    ....+||.+.+ ..|+.++|+||+|+. +.+.++..             ..+-...+..+
T Consensus       408 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlGv~-l~el~t~g-------------~~P~~~~~~~~  472 (535)
T 2h8h_A          408 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGIL-LTELTTKG-------------RVPYPGMVNRE  472 (535)
T ss_dssp             TSTTTCCCHHHHTTCSTTSCGGGSCHHHHHH-CCCCHHHHHHHHHHH-HHHHTTTT-------------CCSSTTCCHHH
T ss_pred             ccceecCCCceecccCCcCcccccCHHHhcc-CCCCchhhHHHHHHH-HHHHHhCC-------------CCCCCCCCHHH
Confidence            9998764321     1    11338998875 468899999999554 44433210             00111122233


Q ss_pred             HHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          246 LRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       246 L~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +...+.. .    ....+.+-.+.+.+++..|.+.|.++.+.+..+.
T Consensus       473 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~  519 (535)
T 2h8h_A          473 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE  519 (535)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            3333222 1    1223333344455567788888999988876654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5e-32  Score=257.23  Aligned_cols=244  Identities=19%  Similarity=0.196  Sum_probs=175.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceE----EEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPY----ACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...+|++.+.||+|+||.||+|.+..+++.|    |+|.+.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~---~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASV-DNPHVCRLLGICLT   88 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS---CCCHHHHHHHHHHHTTC-CBTTBCCCCEEEES
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEec
Confidence            4568999999999999999999999888876    5555433221   23456788999999999 69999999999987


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      .. .++|++|+++|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a  164 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLA  164 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC-
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcce
Confidence            65 88999999999999999874 569999999999999999999999999999999999999   66789999999999


Q ss_pred             ccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          178 LLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       178 ~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      +........          ...+||.+.+ ..|+.++|+||+|++++ +.+.             ....+-...+..++.
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-ell~-------------~g~~p~~~~~~~~~~  229 (327)
T 3lzb_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVW-ELMT-------------FGSKPYDGIPASEIS  229 (327)
T ss_dssp             ---------------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCGGGHH
T ss_pred             eEccCccccccccCCCccccccCHHHHcC-CCCChHHHHHHHHHHHH-HHHH-------------CCCCCCCCCCHHHHH
Confidence            876432211          1338898876 56889999999965543 3221             001111112222333


Q ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          248 AGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       248 ~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ..+..-     ....+.+-...+-+++..|+..|+++.|.+..+...
T Consensus       230 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          230 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             HHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            333321     112333334445556778888999999988766443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.5e-32  Score=260.13  Aligned_cols=194  Identities=25%  Similarity=0.355  Sum_probs=153.6

Q ss_pred             cccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           13 YPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        13 ~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      -...+...+....+|++.+.||+|+||.||+|++..+++.||||++....    ......+.+|+.+++.+.+||||+++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~   91 (337)
T 3ll6_A           16 SDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQF   91 (337)
T ss_dssp             CSSTTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             HHhhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhc
Confidence            33445556666779999999999999999999999999999999986543    34456788999999999669999999


Q ss_pred             eeeee--------cCCeEEEEEeccCCCChHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcce
Q 042392           93 KSAHE--------DETAVHVVMELCQGGDLFDRIIA---KGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFC  159 (436)
Q Consensus        93 ~~~~~--------~~~~~~iv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nil  159 (436)
                      ++++.        ....+++||||+. |+|.+++..   .+++++..++.++.||+.||.|||+.|  |+||||||+|||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl  170 (337)
T 3ll6_A           92 CSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL  170 (337)
T ss_dssp             EEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred             cccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence            99983        4456899999996 599998876   456999999999999999999999999  999999999999


Q ss_pred             eeccCCCCcEEEEecCCcccccccCC--------------------CCCCChHHHH--HHHHHHHhhhhhhHHHHHH
Q 042392          160 FISRDDNALLKVTDFGSALLFEEEGG--------------------EASDDTSVIL--RMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       160 l~~~~~~~~~kl~DFG~a~~~~~~~~--------------------~~~~~pe~~~--~~~~~~~~~d~~s~~~~~~  214 (436)
                      +   +.++.+||+|||++........                    ....+||.+.  ....++.++|+||+|++++
T Consensus       171 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~  244 (337)
T 3ll6_A          171 L---SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY  244 (337)
T ss_dssp             E---CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred             E---CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence            9   7788999999999987654211                    1123888874  3345788999999965543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.2e-32  Score=249.42  Aligned_cols=242  Identities=22%  Similarity=0.300  Sum_probs=181.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee--cCC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE--DET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--~~~  100 (436)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++......  ......+.+|+.+++.+ +||||+++++++.  ...
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNT   80 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGT
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCc
Confidence            457899999999999999999999999999999999765433  24456789999999999 6999999999874  467


Q ss_pred             eEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC-----cccccCCCCcceeeccCCCCcEEE
Q 042392          101 AVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      .+|+||||+++++|.+++...    ..+++..++.++.|++.||.|||+.+     |+||||||+||++   +.++.+||
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl  157 (279)
T 2w5a_A           81 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKL  157 (279)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEE
T ss_pred             eEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEE
Confidence            899999999999999999764    24899999999999999999999999     9999999999999   77889999


Q ss_pred             EecCCccccccc--------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          172 TDFGSALLFEEE--------GGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       172 ~DFG~a~~~~~~--------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      +|||++......        ......+||.+.+. .++.++|+||+|+.++ +.++.              ..+-...+.
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~-~l~~g--------------~~p~~~~~~  221 (279)
T 2w5a_A          158 GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM-SYNEKSDIWSLGCLLY-ELCAL--------------MPPFTAFSQ  221 (279)
T ss_dssp             CCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC--CCHHHHHHHHHHHHH-HHHHS--------------SCSSCCSSH
T ss_pred             ecCchheeeccccccccccCCCccccChHHhccC-CCCchhhHHHHHHHHH-HHHHC--------------CCCCcccCH
Confidence            999999876432        22234489988764 6788999999965543 22210              111111223


Q ss_pred             HHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          244 DELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       244 ~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .++...+..     +....+.+-.+.+-+++..|+..|+++.|.+...
T Consensus       222 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          222 KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            333333222     1122344434445556778888899998887643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.5e-32  Score=259.53  Aligned_cols=252  Identities=17%  Similarity=0.164  Sum_probs=181.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee----
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE----   97 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~----   97 (436)
                      ....+|++.+.||+|+||.||+|++..+++.||||++....    ......+.+|+.+++.+ +||||+++++++.    
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  100 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLF-NHPNILRLVAYCLRERG  100 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEET
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccC
Confidence            34568999999999999999999999999999999986543    34456788999999999 6999999999986    


Q ss_pred             cCCeEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           98 DETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      .....|+||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|
T Consensus       101 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~d  177 (317)
T 2buj_A          101 AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMD  177 (317)
T ss_dssp             TEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECC
T ss_pred             CCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEe
Confidence            34578999999999999999986    3569999999999999999999999999999999999999   7788999999


Q ss_pred             cCCccccccc-----------------CCCCCCChHHHHHHH--HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhC
Q 042392          174 FGSALLFEEE-----------------GGEASDDTSVILRMK--QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMD  234 (436)
Q Consensus       174 FG~a~~~~~~-----------------~~~~~~~pe~~~~~~--~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D  234 (436)
                      ||++......                 ......+||.+.+..  .++.++|+||+|++++.-..+........       
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------  250 (317)
T 2buj_A          178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF-------  250 (317)
T ss_dssp             CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHH-------
T ss_pred             cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhh-------
Confidence            9998765321                 122234888776432  36789999999655432221111110000       


Q ss_pred             CCCCCccCHHHHHHHHHh-cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          235 TDKNGTLSYDELRAGLTK-VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~-~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      ...  ......+...... .....+..-.+.+-+++..|++.|+++.+.+..+....
T Consensus       251 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          251 QKG--DSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             HTT--SCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             ccc--chhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence            000  0000000000000 01223444445556677888899999999998876553

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.3e-32  Score=260.52  Aligned_cols=183  Identities=18%  Similarity=0.265  Sum_probs=155.7

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +...++|++.+.||+|+||.||+|++ .+++.||||++.....    .....+.+|+.+++.+ +||||+++++++...+
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESS----QGIEEFETEIETLSFC-RHPHLVSLIGFCDERN  108 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCS----SHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTT
T ss_pred             HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccCh----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCC
Confidence            45668999999999999999999996 4789999998865432    3345788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG----YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .+|+||||+++|+|.+++....    .+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~  185 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGI  185 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTT
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeeccc
Confidence            9999999999999999886543    48899999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccC----------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          177 ALLFEEEG----------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       177 a~~~~~~~----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +.......          .....+||.+.+ ..|+.++|+||+|+.+
T Consensus       186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  231 (321)
T 2qkw_B          186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIK-GRLTEKSDVYSFGVVL  231 (321)
T ss_dssp             CEECSSSSCCCCBCCCEEETTTCCHHHHHH-CBCCTHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCCccccCHHHhcC-CCCCcccchHhHHHHH
Confidence            98654321          112338998876 4688999999995554

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=6.3e-33  Score=267.57  Aligned_cols=186  Identities=17%  Similarity=0.175  Sum_probs=150.5

Q ss_pred             cccccceeeeeeecccCCeEEEEE-----EECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeece
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLC-----TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELK   93 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~-----~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~   93 (436)
                      +....+|++.+.||+|+||.||+|     .+..+++.||||++....       ...+.+|+.+++.+.  .||||++++
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~e~~~~~~l~~~~~~~iv~~~  133 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-------PWEFYIGTQLMERLKPSMQHMFMKFY  133 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-------HHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-------hhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence            344567999999999999999999     467789999999986542       235678888888883  289999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeec------
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIA-----KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS------  162 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~------  162 (436)
                      +++...+..|+|||||++|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+..      
T Consensus       134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred             eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence            999999999999999999999999985     346999999999999999999999999999999999999932      


Q ss_pred             --cCCCCcEEEEecCCccccccc----------CCCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          163 --RDDNALLKVTDFGSALLFEEE----------GGEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       163 --~~~~~~~kl~DFG~a~~~~~~----------~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                        ....+.+||+|||+|+.+...          +.....|||++.+ ..|+.++|+||+|++++
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  276 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVY  276 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHH
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHH
Confidence              111789999999999765321          1122339998877 45899999999955543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-31  Score=253.08  Aligned_cols=245  Identities=20%  Similarity=0.218  Sum_probs=177.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ......++|++.+.||+|+||.||+|++..+++.||||++.....     ....+.+|+.+++.+.+||||+++++++..
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            345577899999999999999999999999999999999875432     235688999999999669999999999976


Q ss_pred             ------CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           99 ------ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        99 ------~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                            ...+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~k  169 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVK  169 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEE
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEE
Confidence                  46799999999999999999874  469999999999999999999999999999999999999   7788999


Q ss_pred             EEecCCcccccccCC--------CCCCChHHHHH----HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCC
Q 042392          171 VTDFGSALLFEEEGG--------EASDDTSVILR----MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       171 l~DFG~a~~~~~~~~--------~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~  238 (436)
                      |+|||++........        ....+||.+..    ...++.++|+||+|+.++ +.+...             .+-.
T Consensus       170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~-------------~p~~  235 (326)
T 2x7f_A          170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI-EMAEGA-------------PPLC  235 (326)
T ss_dssp             ECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHH-HHHHSS-------------CTTT
T ss_pred             EeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHH-HHHhCC-------------CCCC
Confidence            999999987643221        11238998863    346778999999965543 322100             0000


Q ss_pred             CccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          239 GTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +.-....+.......     ....+..-.+.+-+++..|+..|++..+.+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          236 DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             TSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000111111111111     11233333444555667888899999998764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.7e-32  Score=253.95  Aligned_cols=247  Identities=14%  Similarity=0.112  Sum_probs=172.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECC---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      .....+|++.+.||+|+||.||+|.+..   ++..||+|++......  ......+.+|+.+++.+ +||||+++++++.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~  106 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS--QREIEEFLSEAACMKDF-SHPNVIRLLGVCI  106 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC--HHHHHHHHHHHHHHHTC-CCTTBCCCCEEEE
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc--hhHHHHHHHHHHHHhcC-CCCCeeeeeEEEe
Confidence            3445689999999999999999998765   5568999998765432  23456788999999999 6999999999987


Q ss_pred             cCC-----eEEEEEeccCCCChHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392           98 DET-----AVHVVMELCQGGDLFDRIIA------KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        98 ~~~-----~~~iv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      ...     ..|+||||+++|+|.+++..      ...+++..++.++.||+.||.|||++||+||||||+||++   +.+
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~  183 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDD  183 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTT
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCC
Confidence            654     35999999999999999854      2458999999999999999999999999999999999999   778


Q ss_pred             CcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC
Q 042392          167 ALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD  236 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~  236 (436)
                      +.+||+|||++.........          ...+||.+.+ ..|+.++|+||+|++++ +.+..             ...
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~~-------------g~~  248 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMW-EIATR-------------GMT  248 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHS-SCCCHHHHHHHHHHHHH-HHHTT-------------SCC
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcC-CCccchhhhHHHHHHHH-HHHhc-------------CCC
Confidence            89999999999876432211          1228888865 56888999999965543 22210             000


Q ss_pred             CCCccCHHHHHHHH-Hh----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          237 KNGTLSYDELRAGL-TK----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       237 ~~g~i~~~eL~~~l-~~----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +-...+..++...+ ..    .....+.+-.+.+-+++..|++.|+++.+.+..+..
T Consensus       249 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  305 (313)
T 3brb_A          249 PYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK  305 (313)
T ss_dssp             SSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            00001111122211 11    112233333444555677888899999998876643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.9e-32  Score=256.14  Aligned_cols=186  Identities=23%  Similarity=0.291  Sum_probs=150.2

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee-
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE-   97 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-   97 (436)
                      +...+.++|++.+.||+|+||.||+|.+..+++.||+|++....    ......+.+|+.+++.+ +||||+++++++. 
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   79 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRL-DHDNIVKVFEILGP   79 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTC-CCTTBCCEEEEECT
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhc-CCCCeeEEEEeccc
Confidence            44567889999999999999999999999999999999987543    34456788999999999 6999999999873 


Q ss_pred             -------------cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC
Q 042392           98 -------------DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD  164 (436)
Q Consensus        98 -------------~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~  164 (436)
                                   ....+|+||||++ |+|.+++.. +++++..++.++.|++.||.|||++||+||||||+||++.  .
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~  155 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--T  155 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--T
T ss_pred             cccccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--C
Confidence                         3467999999998 599998854 5699999999999999999999999999999999999994  2


Q ss_pred             CCCcEEEEecCCcccccccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          165 DNALLKVTDFGSALLFEEEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       165 ~~~~~kl~DFG~a~~~~~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .++.+||+|||++.......           .....+||.+.+...++.++|+||+|+.+
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  215 (320)
T 2i6l_A          156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF  215 (320)
T ss_dssp             TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred             CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHH
Confidence            45789999999998764321           11233899988767889999999995544

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.6e-31  Score=246.20  Aligned_cols=248  Identities=19%  Similarity=0.222  Sum_probs=179.6

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee-eeecCC
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS-AHEDET  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~-~~~~~~  100 (436)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++......      ..+.+|+.+++.+. |++++..+. ++....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~   78 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQ-GGVGIPTIRWCGAEGD   78 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC------CHHHHHHHHHHHHT-TSTTCCCEEEEEEETT
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch------hHHHHHHHHHHHhh-cCCCCCccccccCCCC
Confidence            4668999999999999999999999999999999998765432      24789999999995 666555544 456778


Q ss_pred             eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..|+||||+ +++|.+++.. ..++++..++.++.||+.||.|||++||+||||||+||++...+.++.+||+|||+|..
T Consensus        79 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A           79 YNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            899999999 8899999985 35699999999999999999999999999999999999995334678899999999987


Q ss_pred             ccccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          180 FEEEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       180 ~~~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      ......               ....+||.+.+ ..++.++|+||+|+.++ +.+...      ..|...+. ....-...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g~------~pf~~~~~-~~~~~~~~  228 (296)
T 3uzp_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLM-YFNLGS------LPWQGLKA-ATKRQKYE  228 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHSS------CTTSSCCC-SSSSSHHH
T ss_pred             ccccccccccccccccccccccccCChhhhcC-CCCCcchhhHHHHHHHH-HHHhCC------CCCCCcCc-hhhhhhhh
Confidence            654322               11228888776 45889999999965543 322110      11111111 11111112


Q ss_pred             HHHHHHH-----hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLT-----KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~-----~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+.....     .+....+.+-.+.+-+++..|++.|+++.+.+..+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  275 (296)
T 3uzp_A          229 RISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF  275 (296)
T ss_dssp             HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred             hhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence            2221111     12234455545556667788999999999988654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-32  Score=258.02  Aligned_cols=249  Identities=21%  Similarity=0.287  Sum_probs=174.9

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh--hHHHHHHHHHHHHHhcC---CCCCeeec
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA--ENDMMIRREIQIRRLLS---GQPNIVEL   92 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--~~~~~~~~E~~~l~~l~---~h~niv~~   92 (436)
                      ...+.+.++|++.+.||+|+||.||+|++..+++.||||++.........  .....+.+|+.+++.+.   +||||+++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            34577888999999999999999999999999999999999765332100  12233567999998883   49999999


Q ss_pred             eeeeecCCeEEEEEec-cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           93 KSAHEDETAVHVVMEL-CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      ++++...+..++|||+ +.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++.  ..++.+||
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl  181 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKL  181 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEE
T ss_pred             EEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEE
Confidence            9999999999999999 78899999999888899999999999999999999999999999999999993  16789999


Q ss_pred             EecCCcccccccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          172 TDFGSALLFEEEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       172 ~DFG~a~~~~~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +|||++.........      ...+||.+.+...++.++|+||+|+.++ +.+...              .+-  -...+
T Consensus       182 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~-~l~~g~--------------~pf--~~~~~  244 (312)
T 2iwi_A          182 IDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLY-DMVCGD--------------IPF--ERDQE  244 (312)
T ss_dssp             CCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHH-HHHHSS--------------CSC--CSHHH
T ss_pred             EEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHH-HHHHCC--------------CCC--CChHH
Confidence            999999876543221      2338998887655677999999955543 322100              000  00111


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          246 LRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       246 L~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +......+....+..-.+.+-+++..|.+.|++..|.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          245 ILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111111223344444555666778888999999998764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.1e-31  Score=247.34  Aligned_cols=246  Identities=22%  Similarity=0.219  Sum_probs=179.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC---CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      +....++|++.+.||+|+||.||+|++..   ++..||+|++.....   ......+.+|+.+++.+ +||||+++++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   82 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT---LDNKEKFMSEAVIMKNL-DHPHIVKLIGII   82 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC---HHHHHHHHHHHHHHHHH-CCTTBCCEEEEE
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC---chHHHHHHHHHHHHHhC-CCCCcceEEEEE
Confidence            34456789999999999999999998754   344699999876532   23456789999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      ... ..|+||||+++++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        83 ~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg  158 (281)
T 3cc6_A           83 EEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFG  158 (281)
T ss_dssp             CSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---EETTEEEECCCC
T ss_pred             cCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---CCCCcEEeCccC
Confidence            754 5689999999999999998754 59999999999999999999999999999999999999   567899999999


Q ss_pred             CcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          176 SALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       176 ~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      ++........         ....+||.+.+ ..++.++|+||+|++++ +.++ ..              .+-......+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~llt~g~--------------~p~~~~~~~~  222 (281)
T 3cc6_A          159 LSRYIEDEDYYKASVTRLPIKWMSPESINF-RRFTTASDVWMFAVCMW-EILSFGK--------------QPFFWLENKD  222 (281)
T ss_dssp             GGGCC---------CCCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTTTC--------------CTTTTSCGGG
T ss_pred             CCcccccccccccccCCCCcceeCchhhcc-CCCCchhccHHHHHHHH-HHHhCCC--------------CCcccCChHH
Confidence            9987654221         11238888865 46888999999965543 3221 00              0000011111


Q ss_pred             HHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          246 LRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       246 L~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +...+..-     ....+..-.+.+-+++..|++.|+++.|.+..+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            12222111     112333334445556788899999999998876543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.1e-31  Score=249.54  Aligned_cols=242  Identities=18%  Similarity=0.181  Sum_probs=175.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee-ecC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH-EDE   99 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~-~~~   99 (436)
                      ..+|++.+.||+|+||.||+|.+..+   ...||+|.+.....   ......+.+|+.+++.+ +||||+++++++ ...
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   99 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---IGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSE   99 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS---HHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSS
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC---HHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCC
Confidence            35699999999999999999997543   34689998865332   34456788999999999 699999999985 556


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +..|+||||+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|.
T Consensus       100 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~  176 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLAR  176 (298)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGC
T ss_pred             CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECcccccc
Confidence            7889999999999999999764 458999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCCC------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          179 LFEEEGGE------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       179 ~~~~~~~~------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      ........            ...+||.+.+ ..++.++|+||+|++++.-..+...             +..+ ....++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~-------------~~~~-~~~~~~  241 (298)
T 3f66_A          177 DMYDKEYYSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP-------------PYPD-VNTFDI  241 (298)
T ss_dssp             CCSCGGGCBC-----CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCC-------------SSTT-SCTTTH
T ss_pred             cccccchhccccccCCCCCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCC-------------CCcc-CCHHHH
Confidence            66432210            1238888865 4688899999996655322211110             0000 011111


Q ss_pred             HHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          247 RAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       247 ~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...+.. .    ....+..-.+.+-+++..|+..|+++.|.+..+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~  287 (298)
T 3f66_A          242 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS  287 (298)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            111111 1    1122333344455567788888999998887654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.8e-31  Score=274.32  Aligned_cols=240  Identities=15%  Similarity=0.141  Sum_probs=179.1

Q ss_pred             ceee-eeeecccCCeEEEEEEE--CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           26 HYSF-GRMLGRGRFGVTYLCTE--NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        26 ~y~~-~~~lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .+.+ .+.||+|+||.||+|.+  ..+++.||||++......  ......+.+|+.+|+.+ +||||+++++++.. ..+
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~  444 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESW  444 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC--GGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSE
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCE
Confidence            3444 34899999999999955  456789999998764322  23456789999999999 69999999999965 558


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      ++|||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+..
T Consensus       445 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl---~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          445 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCTTHHHHTTC
T ss_pred             EEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE---eCCCCEEEEEcCCcccccc
Confidence            9999999999999999988889999999999999999999999999999999999999   5678999999999987644


Q ss_pred             cCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          183 EGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       183 ~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      ....           ...|||++.+ ..|+.++|+||+|+.++ +.++             ....+-...+..++...+.
T Consensus       522 ~~~~~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~-ellt-------------~G~~Pf~~~~~~~~~~~i~  586 (635)
T 4fl3_A          522 DENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMW-EAFS-------------YGQKPYRGMKGSEVTAMLE  586 (635)
T ss_dssp             -------------CGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TTCCSSTTCCHHHHHHHHH
T ss_pred             CccccccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHHHHH-HHHh-------------CCCCCCCCCCHHHHHHHHH
Confidence            2210           1238998865 46889999999965543 3221             0111111123333433333


Q ss_pred             hc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          252 KV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       252 ~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .-     ....+.+-.+.+-.++..|.+.|+++.+.+..+.
T Consensus       587 ~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~  627 (635)
T 4fl3_A          587 KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  627 (635)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            21     1233444455566677888999999999886653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.7e-32  Score=253.70  Aligned_cols=183  Identities=22%  Similarity=0.309  Sum_probs=150.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|.+..+|+.||||++.....      ...+.+|+.+++.+ +||||+++++++...
T Consensus        24 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   96 (314)
T 3com_A           24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQEIIKEISIMQQC-DSPHVVKYYGSYFKN   96 (314)
T ss_dssp             ------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC------CHHHHHHHHHHHTC-CCTTBCCEEEEEEET
T ss_pred             hhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH------HHHHHHHHHHHHhC-CCCCCccEEEEEEeC
Confidence            34567789999999999999999999999999999999976432      24578999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+||||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++.
T Consensus        97 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~  173 (314)
T 3com_A           97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAG  173 (314)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred             CEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccch
Confidence            999999999999999999974 4569999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          179 LFEEEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       179 ~~~~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ........        ...+||.+.+ ..|+.++|+||+|+.+
T Consensus       174 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  215 (314)
T 3com_A          174 QLTDTMAKRNTVIGTPFWMAPEVIQE-IGYNCVADIWSLGITA  215 (314)
T ss_dssp             ECBTTBSCBCCCCSCGGGCCHHHHSS-SCBCTTHHHHHHHHHH
T ss_pred             hhhhhccccCccCCCCCccChhhcCC-CCCCccccHHHHHHHH
Confidence            76543211        1228888765 4578899999996554

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-31  Score=250.06  Aligned_cols=240  Identities=18%  Similarity=0.181  Sum_probs=176.2

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .|++.+.||+|+||.||+|.+..++.   .||+|.+.....   ......+.+|+.+++.+ +||||+++++++...+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE---MQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS---HHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc---HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCC
Confidence            57788999999999999999765554   799999865332   34456788999999999 699999999999876655


Q ss_pred             -EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          103 -HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       103 -~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                       ++||||+.+|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|+..
T Consensus        98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDI  174 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTT
T ss_pred             cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccc
Confidence             9999999999999999873 458999999999999999999999999999999999999   77889999999999865


Q ss_pred             cccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          181 EEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       181 ~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .....            ....+||.+.+ ..++.++|+||+|++++ +.+..             ..++....+..++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g-------------~~~~~~~~~~~~~~~  239 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQT-YRFTTKSDVWSFGVLLW-ELLTR-------------GAPPYRHIDPFDLTH  239 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHT-------------SCCTTTTSCGGGHHH
T ss_pred             cCCcccccccCcCCCCCccccChhhhcc-CCCChhhchhhHHHHHH-HHhhC-------------CCCCCccCCHHHHHH
Confidence            43211            01127888765 46788999999965543 22210             001111112222222


Q ss_pred             HHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          249 GLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       249 ~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+...     ....+..-.+.+-+++..|+..|+++.+.+..+.
T Consensus       240 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~  283 (298)
T 3pls_A          240 FLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE  283 (298)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            22221     1123333344455567788888999988887653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.98  E-value=1.9e-32  Score=256.96  Aligned_cols=188  Identities=20%  Similarity=0.323  Sum_probs=141.9

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ++....++|++.+.||+|+||.||+|.+..+++.||||++.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   84 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQC-HHPNIVSYYTSFVV   84 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCC-CCTTBCCEEEEEES
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhc-CCCCEeeEEEEEee
Confidence            456677899999999999999999999988999999998865432   12345678999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           99 ETAVHVVMELCQGGDLFDRIIA--------KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      .+..|+||||+++++|.+++..        .+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+|
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~k  161 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQ  161 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEE
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEE
Confidence            9999999999999999999975        3458999999999999999999999999999999999999   7788999


Q ss_pred             EEecCCcccccccC-------------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          171 VTDFGSALLFEEEG-------------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       171 l~DFG~a~~~~~~~-------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|||++.......             .....+||.+.+...++.++|+||+|+.+
T Consensus       162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  217 (303)
T 2vwi_A          162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA  217 (303)
T ss_dssp             ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHH
T ss_pred             EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHH
Confidence            99999987654321             11233899988767788999999996554

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.98  E-value=7.7e-32  Score=252.91  Aligned_cols=187  Identities=24%  Similarity=0.304  Sum_probs=155.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.++|++.+.||+|+||.||+|++..+++.||+|++.....    .....+.+|+.+++.+ +||||+++++++...
T Consensus        14 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   88 (302)
T 2j7t_A           14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATC-DHPYIVKLLGAYYHD   88 (302)
T ss_dssp             SSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC
T ss_pred             ccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeC
Confidence            34677899999999999999999999999999999999865432    2345788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+||||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++.
T Consensus        89 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSA  165 (302)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHH
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCc
Confidence            999999999999999998876 3569999999999999999999999999999999999999   778899999999876


Q ss_pred             ccccc--------CCCCCCChHHHHH----HHHHHHhhhhhhHHHHHH
Q 042392          179 LFEEE--------GGEASDDTSVILR----MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       179 ~~~~~--------~~~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~  214 (436)
                      .....        ......+||.+..    ...++.++|+||+|+.++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~  213 (302)
T 2j7t_A          166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI  213 (302)
T ss_dssp             HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHH
T ss_pred             cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHH
Confidence            43221        1122338998863    345778999999965543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.98  E-value=4.7e-32  Score=252.85  Aligned_cols=249  Identities=16%  Similarity=0.215  Sum_probs=173.7

Q ss_pred             cccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           15 ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .-..+++...++|++.+.||+|+||.||+|++.   ..||+|++......  ......+.+|+.+++.+ +||||+++++
T Consensus        14 ~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~   87 (289)
T 3og7_A           14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT--PQQLQAFKNEVGVLRKT-RHVNILLFMG   87 (289)
T ss_dssp             ----CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCC--HHHHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             CCCCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCC--HHHHHHHHHHHHHHHhC-CCCcEEEEEe
Confidence            334567888899999999999999999999864   35999998765433  34456789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      +. ....+++||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|
T Consensus        88 ~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~D  163 (289)
T 3og7_A           88 YS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGD  163 (289)
T ss_dssp             EE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECC
T ss_pred             ec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEcc
Confidence            65 456689999999999999999654 459999999999999999999999999999999999999   6778999999


Q ss_pred             cCCcccccccC----------CCCCCChHHHHH--HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCcc
Q 042392          174 FGSALLFEEEG----------GEASDDTSVILR--MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTL  241 (436)
Q Consensus       174 FG~a~~~~~~~----------~~~~~~pe~~~~--~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i  241 (436)
                      ||+|.......          .....+||.+..  ...|+.++|+||+|++++ +.+...             .+-.+.-
T Consensus       164 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~-el~~g~-------------~p~~~~~  229 (289)
T 3og7_A          164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY-ELMTGQ-------------LPYSNIN  229 (289)
T ss_dssp             CC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHH-HHHHSS-------------CTTSSCC
T ss_pred             ceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHH-HHHHCC-------------CCccccc
Confidence            99998654311          122338988752  345778999999965543 222100             0111122


Q ss_pred             CHHHHHHHHHhc---------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          242 SYDELRAGLTKV---------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       242 ~~~eL~~~l~~~---------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ..+.+...+..-         ....+..-.+.+-+++..|++.|+++.+.+..+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~  284 (289)
T 3og7_A          230 NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE  284 (289)
T ss_dssp             CHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence            233333333221         1122333334445566778888899888887654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.98  E-value=9.1e-32  Score=250.97  Aligned_cols=249  Identities=16%  Similarity=0.171  Sum_probs=175.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-CCc--eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-TNM--PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~--~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ......+|++.+.||+|+||.||+|++.. ++.  .||||++....... ......+.+|+.+++.+ +||||+++++++
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   90 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSL-DHRNLIRLYGVV   90 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-HHHHHHHHHHHHHHHhC-CCCCcccEEEEE
Confidence            34456789999999999999999998643 333  68999987553322 34556789999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      .... .++||||+++++|.+++... +.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        91 ~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg  166 (291)
T 1u46_A           91 LTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFG  166 (291)
T ss_dssp             CSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCT
T ss_pred             ccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---cCCCCEEEcccc
Confidence            8765 89999999999999999875 569999999999999999999999999999999999999   567899999999


Q ss_pred             CcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          176 SALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       176 ~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      ++.........           ...+||.+.+ ..++.++|+||+|+.++ +.+.             ....+-...+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~-------------~g~~p~~~~~~~  231 (291)
T 1u46_A          167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLW-EMFT-------------YGQEPWIGLNGS  231 (291)
T ss_dssp             TCEECCC-CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCHH
T ss_pred             ccccccccccchhhhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHHH-HHHh-------------CCCCCcccCCHH
Confidence            99876543211           1338888865 46788999999965543 3221             001111112223


Q ss_pred             HHHHHHHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          245 ELRAGLTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       245 eL~~~l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++...+...+      ...+.+-.+.+.+++..|+..|+++.+.+..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          232 QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence            3333222211      22344444555556778888999999988776544

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.98  E-value=1.2e-31  Score=252.00  Aligned_cols=243  Identities=18%  Similarity=0.238  Sum_probs=177.6

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee--ecCC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH--EDET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~--~~~~  100 (436)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++..............+.+|+.+++.+ +||||+++++++  ....
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCC
Confidence            5678999999999999999999999999999999997643222123456789999999999 699999999998  4456


Q ss_pred             eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+|+||||++++ |.+++...  ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAE  157 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeecccccc
Confidence            899999999875 87877763  459999999999999999999999999999999999999   778899999999998


Q ss_pred             cccccCC----------CCCCChHHHHHHH-HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          179 LFEEEGG----------EASDDTSVILRMK-QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       179 ~~~~~~~----------~~~~~pe~~~~~~-~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      .......          ....+||.+.+.. .++.++|+||+|+.++ +.+..              ..+-...+..++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~-~l~~g--------------~~p~~~~~~~~~~  222 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY-NITTG--------------LYPFEGDNIYKLF  222 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHH-HHHHS--------------SCSCCCSSHHHHH
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHH-HHHhC--------------CCCCCCchHHHHH
Confidence            7643211          1122899887533 3467899999965543 32210              0010111222332


Q ss_pred             HHHHh----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 AGLTK----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ~~l~~----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..+..    +....+..-.+.+-+++..|++.|++..|.+.+
T Consensus       223 ~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          223 ENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            22222    112334444455556778899999999998864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.98  E-value=6.8e-31  Score=245.59  Aligned_cols=248  Identities=19%  Similarity=0.218  Sum_probs=174.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece-eeeecCC
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK-SAHEDET  100 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~-~~~~~~~  100 (436)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++......      ..+.+|+.+++.+. |++++..+ .++....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~   78 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQ-GGVGIPTIRWCGAEGD   78 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHHHHHHHHHHT-TSTTCCCEEEEEEETT
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHHHHHHHHHhc-CCCCCCeeeeecCCCC
Confidence            4567899999999999999999999999999999987654332      24778999999995 66655554 4557778


Q ss_pred             eEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|+.
T Consensus        79 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~  157 (296)
T 4hgt_A           79 YNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence            899999999 8899999985 35699999999999999999999999999999999999995444667899999999987


Q ss_pred             ccccCCC---------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          180 FEEEGGE---------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       180 ~~~~~~~---------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      .......               ...+||.+.+ ..++.++|+||+|++++ +.+...      ..|...+... ......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g~------~pf~~~~~~~-~~~~~~  228 (296)
T 4hgt_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLM-YFNLGS------LPWQGLKAAT-KRQKYE  228 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHSS------CTTSSCCCSS-SSSHHH
T ss_pred             ccCcccCccCCCCcccccCCCccccchHHhcC-CCCCchhHHHHHHHHHH-HHhcCC------CCCcccchhh-hhhhhh
Confidence            6543221               1128888776 45889999999966554 322110      1121111111 111111


Q ss_pred             HHHHHHH-----hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLT-----KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~-----~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+.....     .+....+.+-.+.+-+++..|++.|+++.+.+..+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l  275 (296)
T 4hgt_A          229 RISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF  275 (296)
T ss_dssp             HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred             hhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence            1111111     11233455555556667788999999999888654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.98  E-value=6.3e-32  Score=259.38  Aligned_cols=255  Identities=17%  Similarity=0.218  Sum_probs=183.2

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+..+|.+.+.||+|+||.||+|++..+|+.||||++......  ......+.+|+.+++.+ +||||+++++++....
T Consensus        20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHM-QHENVIGLLDVFTPAS   96 (353)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCS
T ss_pred             cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc--hHHHHHHHHHHHHHHhc-CCCCcccHhheEeccc
Confidence            34678999999999999999999999999999999999764322  34456788999999999 6999999999998765


Q ss_pred             e------EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392          101 A------VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus       101 ~------~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      .      +|+||||+.+ +|.+++.  ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+||
T Consensus        97 ~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Df  170 (353)
T 3coi_A           97 SLRNFYDFYLVMPFMQT-DLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDF  170 (353)
T ss_dssp             SGGGCCCCEEEEECCSE-EGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECST
T ss_pred             ccccceeEEEEeccccC-CHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeec
Confidence            4      5999999974 8888764  359999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-----CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC---
Q 042392          175 GSALLFEEEGG-----EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG---  239 (436)
Q Consensus       175 G~a~~~~~~~~-----~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g---  239 (436)
                      |++........     ....+||.+.+...++.++|+||+|+.+ .+.+       +......+..+......++..   
T Consensus       171 g~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il-~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  249 (353)
T 3coi_A          171 GLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM-AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  249 (353)
T ss_dssp             TCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHH-HHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred             ccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            99987654321     2233899887756788999999996554 3322       122333344444433322110   


Q ss_pred             ccCHHHHHHHHHhcC-----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          240 TLSYDELRAGLTKVG-----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~-----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .+........+..+.           ...+.+-.+.+-+++..|++.|++..+.+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            011111122222211           1234444455555677788888888877654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.8e-31  Score=247.39  Aligned_cols=244  Identities=18%  Similarity=0.164  Sum_probs=180.3

Q ss_pred             cccccceeeee-eecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           21 EDVMLHYSFGR-MLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ....++|.+.+ .||+|+||.||+|.+.  .++..||||++.....   ......+.+|+.+++.+ +||||+++++++ 
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-   79 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---KADTEEMMREAQIMHQL-DNPYIVRLIGVC-   79 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc---hhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-
Confidence            44567888877 9999999999999864  4678899999976532   34556789999999999 699999999999 


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      ..+.+|+||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~  156 (287)
T 1u59_A           80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGL  156 (287)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTT
T ss_pred             cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE---cCCCCEEECcccc
Confidence            456699999999999999999754 459999999999999999999999999999999999999   5678999999999


Q ss_pred             cccccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          177 ALLFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       177 a~~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +........           ....+||.+.+ ..++.++|+||+|+.++ +.++.             ...+-...+..+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~-ellt~-------------g~~p~~~~~~~~  221 (287)
T 1u59_A          157 SKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMW-EALSY-------------GQKPYKKMKGPE  221 (287)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHH-HHHTT-------------SCCTTTTCCTHH
T ss_pred             eeeeccCcceeeccccccccccccCHHHhcc-CCCCchhhHHHHHHHHH-HHHcC-------------CCCCcccCCHHH
Confidence            987643221           11238888865 46888999999955543 32210             001111112223


Q ss_pred             HHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          246 LRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       246 L~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +...+..-     ....+.+-.+.+-+++..|++.|+++.+.+..+.
T Consensus       222 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          222 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            33333221     1233444444455567788889999999886643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.98  E-value=1.4e-31  Score=255.19  Aligned_cols=242  Identities=26%  Similarity=0.388  Sum_probs=163.3

Q ss_pred             cccccceeeee-eecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHH-HHhcCCCCCeeeceeeeec
Q 042392           21 EDVMLHYSFGR-MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        21 ~~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+.++|.+.+ .||+|+||.||+|++..+++.||||++....         ...+|+.. ++.+ +||||+++++++..
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~e~~~~~~~~-~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---------KARQEVDHHWQAS-GGPHIVCILDVYEN   93 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---------HHHHHHHHHHHHT-TSTTBCCEEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---------HHHHHHHHHHHhc-CCCChHHHHHHHhh
Confidence            45778999955 6999999999999999999999999986532         12233333 4455 79999999999876


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 ----ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ----~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                          ...+|+|||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+
T Consensus        94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~  173 (336)
T 3fhr_A           94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT  173 (336)
T ss_dssp             EETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred             ccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEe
Confidence                456899999999999999998764  59999999999999999999999999999999999999654446779999


Q ss_pred             ecCCcccccccCCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          173 DFGSALLFEEEGGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       173 DFG~a~~~~~~~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |||++.........      ...+||.+.+ ..|+.++|+||+|+.++ +.+ +...       |   .......+... 
T Consensus       174 Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~-~l~~g~~p-------f---~~~~~~~~~~~-  240 (336)
T 3fhr_A          174 DFGFAKETTQNALQTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMY-ILLCGFPP-------F---YSNTGQAISPG-  240 (336)
T ss_dssp             CCTTCEEC-----------------------CHHHHHHHHHHHHHHHH-HHHHSSCC-------C---------------
T ss_pred             ccccceeccccccccCCCCcCccChhhhCC-CCCCchhhHHHHHHHHH-HHHHCCCC-------C---CCccchhhhhh-
Confidence            99999876543221      1238888755 57899999999966543 322 1000       0   00000000000 


Q ss_pred             HHHHHH----hcC----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          246 LRAGLT----KVG----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       246 L~~~l~----~~~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +...+.    .+.    ...+.+-.+.+-+++..|++.|+++.|.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            001000    011    1334444555566778889999999998864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.98  E-value=1.3e-31  Score=258.10  Aligned_cols=188  Identities=21%  Similarity=0.297  Sum_probs=150.9

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc-------hhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-------YAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      ...+.++|++.+.||+|+||.||+|.+. +|+.||||++.......       .......+.+|+.+++.+ +||||+++
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~   94 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGL   94 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCC
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccce
Confidence            4567789999999999999999999985 49999999986543221       122346789999999999 69999999


Q ss_pred             eeeee-----cCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392           93 KSAHE-----DETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus        93 ~~~~~-----~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      ++++.     ....+|+||||+++ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++   +.+
T Consensus        95 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~  170 (362)
T 3pg1_A           95 RDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADN  170 (362)
T ss_dssp             SEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTT
T ss_pred             eeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCC
Confidence            99984     33478999999984 8988887653 59999999999999999999999999999999999999   778


Q ss_pred             CcEEEEecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          167 ALLKVTDFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +.+||+|||+|.........       ...+||.+.+...++.++|+||+|+++
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  224 (362)
T 3pg1_A          171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM  224 (362)
T ss_dssp             CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred             CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence            89999999999865433221       123899988767789999999996554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.98  E-value=4.4e-31  Score=247.51  Aligned_cols=234  Identities=26%  Similarity=0.368  Sum_probs=171.4

Q ss_pred             cccccccceeee-eeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           19 PYEDVMLHYSFG-RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        19 ~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      ....+.++|.+. +.||+|+||.||+|.+..+++.||+|++...         ....+|+.++..+.+||||+++++++.
T Consensus        11 ~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~   81 (299)
T 3m2w_A           11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYE   81 (299)
T ss_dssp             BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHHHHHHHHHHHhccCCCchhHHhhhh
Confidence            345677889887 8899999999999999999999999998642         246688888855547999999999987


Q ss_pred             c----CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           98 D----ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        98 ~----~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      .    ...+|+||||+++|+|.+++....  .+++..++.++.|++.||.|||++||+||||||+||++.....++.+||
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl  161 (299)
T 3m2w_A           82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL  161 (299)
T ss_dssp             EEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred             hhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEE
Confidence            6    677999999999999999998864  5999999999999999999999999999999999999954333789999


Q ss_pred             EecCCcccccccCCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCCc--cCHHH
Q 042392          172 TDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNGT--LSYDE  245 (436)
Q Consensus       172 ~DFG~a~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g~--i~~~e  245 (436)
                      +|||+|.....               ..|+.++|+||+|++++ +.+    +...................+.  .....
T Consensus       162 ~Dfg~a~~~~~---------------~~~~~~~DiwslG~il~-el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (299)
T 3m2w_A          162 TDFGFAKETTG---------------EKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  225 (299)
T ss_dssp             CCCTTCEECTT---------------CGGGGHHHHHHHHHHHH-HHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred             ecccccccccc---------------ccCCchhhHHHHHHHHH-HHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence            99999986543               35778999999965543 322    1110000000000000000000  00000


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          246 LRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       246 L~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                              ....+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       226 --------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          226 --------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             --------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --------cccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                    01234444555666778899999999998864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.98  E-value=5.8e-32  Score=263.54  Aligned_cols=186  Identities=19%  Similarity=0.262  Sum_probs=154.6

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-------CCCCee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------GQPNIV   90 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------~h~niv   90 (436)
                      .....+.++|++.+.||+|+||.||+|++..+++.||||++...     ......+.+|+.+++.+.       +||||+
T Consensus        30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv  104 (397)
T 1wak_A           30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVV  104 (397)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred             ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence            35566788999999999999999999999999999999998643     234567889999999984       278899


Q ss_pred             eceeeee----cCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeecc
Q 042392           91 ELKSAHE----DETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISR  163 (436)
Q Consensus        91 ~~~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~  163 (436)
                      ++++++.    ....+|+||||+ +++|.+.+...  ..+++..++.++.||+.||.|||++ ||+||||||+|||+   
T Consensus       105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll---  180 (397)
T 1wak_A          105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL---  180 (397)
T ss_dssp             CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEE---
T ss_pred             eeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeE---
Confidence            9999987    556899999999 55888877765  4599999999999999999999998 99999999999999   


Q ss_pred             CCCC-------------------------------------------------cEEEEecCCcccccccCCC-----CCC
Q 042392          164 DDNA-------------------------------------------------LLKVTDFGSALLFEEEGGE-----ASD  189 (436)
Q Consensus       164 ~~~~-------------------------------------------------~~kl~DFG~a~~~~~~~~~-----~~~  189 (436)
                      +.++                                                 .+||+|||+|.........     ...
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~  260 (397)
T 1wak_A          181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYR  260 (397)
T ss_dssp             CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGC
T ss_pred             eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCccc
Confidence            4333                                                 7999999999876543222     122


Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +||++.+ ..|+.++|+||+|+.+
T Consensus       261 aPE~~~~-~~~~~~~DiwslG~il  283 (397)
T 1wak_A          261 SLEVLIG-SGYNTPADIWSTACMA  283 (397)
T ss_dssp             CHHHHHT-SCCCTHHHHHHHHHHH
T ss_pred             CChhhcC-CCCCcHHHHHHHHHHH
Confidence            8998876 4588999999995554

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.98  E-value=2.5e-32  Score=259.15  Aligned_cols=186  Identities=16%  Similarity=0.204  Sum_probs=155.1

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ......++|++.+.||+|+||.||+|++ .+++.||||++.......   ....+.+|+.+++.+ +||||+++++++..
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   98 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQG---GELQFQTEVEMISMA-VHRNLLRLRGFCMT   98 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC--------CCCHHHHHHHGGGTC-CCTTBCCCCEEECC
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCch---HHHHHHHHHHHHHhc-cCCCccceEEEEec
Confidence            3456678999999999999999999985 468999999987653221   123578999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CcccccCCCCcceeeccCCCCcEEE
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG----YYSERDAAPVLRAIVNAVNVCHSM---GVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      ....++||||+++|+|.+++....    ++++..++.++.|++.||.|||+.   ||+||||||+|||+   +.++.+||
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl  175 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVV  175 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEE
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEe
Confidence            999999999999999999998653    389999999999999999999999   99999999999999   77889999


Q ss_pred             EecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          172 TDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       172 ~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +|||+|........         ....+||.+.+ ..++.++|+||+|+.+
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  225 (326)
T 3uim_A          176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVML  225 (326)
T ss_dssp             CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHHH
T ss_pred             ccCccccccCcccccccccccCCcCccCHHHhcc-CCCCccccchhHHHHH
Confidence            99999987643221         11238888865 4688999999996554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.98  E-value=1.6e-31  Score=248.67  Aligned_cols=226  Identities=10%  Similarity=0.016  Sum_probs=172.7

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++....... ......+.+|+.+++.+ +||||+++++++...+.
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~  105 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP-DDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAG  105 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC-HHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCc
Confidence            56788999999999999999999999999999999997664433 34456788999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|+||||++|++|.+++.. + .....+..++.||+.||.|||++||+||||||+|||+   +.++.+||+++|...   
T Consensus       106 ~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~~~~---  177 (286)
T 3uqc_A          106 GLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPATMP---  177 (286)
T ss_dssp             EEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCCCCT---
T ss_pred             EEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEeccccC---
Confidence            9999999999999999854 3 4566788999999999999999999999999999999   677899999776541   


Q ss_pred             ccCCCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCC----------CCCccCHHHHHHHHH
Q 042392          182 EEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTD----------KNGTLSYDELRAGLT  251 (436)
Q Consensus       182 ~~~~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~----------~~g~i~~~eL~~~l~  251 (436)
                                       .++.++|+||+|+.+ .+.++..      ..|...+..          .......       .
T Consensus       178 -----------------~~~~~~Di~slG~il-~elltg~------~Pf~~~~~~~~~~~~~~~~~~~~~~~-------~  226 (286)
T 3uqc_A          178 -----------------DANPQDDIRGIGASL-YALLVNR------WPLPEAGVRSGLAPAERDTAGQPIEP-------A  226 (286)
T ss_dssp             -----------------TCCHHHHHHHHHHHH-HHHHHSE------ECSCCCSBCCCSEECCBCTTSCBCCH-------H
T ss_pred             -----------------CCCchhHHHHHHHHH-HHHHHCC------CCCCcCCcchhhHHHHHHhccCCCCh-------h
Confidence                             367899999995544 3333110      011110000          0011111       1


Q ss_pred             hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       252 ~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      .+....+.+-.+.+-+++..|.+.| +..|++..+...
T Consensus       227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            2233455554555666788899999 999999877544

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.98  E-value=1.7e-31  Score=256.23  Aligned_cols=235  Identities=16%  Similarity=0.131  Sum_probs=172.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC--------CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee----
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST--------NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE----   91 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~----   91 (436)
                      .++|++.+.||+|+||.||+|++..+        ++.||||++...         ..+.+|+.+++.+ +||||++    
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l-~h~niv~~~~~  110 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRA-AKPLQVNKWKK  110 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHH-CCHHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHh-cccchhhhhhh
Confidence            47899999999999999999999874        889999998654         2467999999999 5999988    


Q ss_pred             -----------ceeeeec-CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCc
Q 042392           92 -----------LKSAHED-ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPEN  157 (436)
Q Consensus        92 -----------~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~N  157 (436)
                                 +++++.. ...+|+||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  189 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN  189 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG
T ss_pred             hccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence                       4566654 67899999999 88999999986  679999999999999999999999999999999999


Q ss_pred             ceeeccCCCC--cEEEEecCCcccccccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh
Q 042392          158 FCFISRDDNA--LLKVTDFGSALLFEEEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG  220 (436)
Q Consensus       158 ill~~~~~~~--~~kl~DFG~a~~~~~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~  220 (436)
                      ||+   +.++  .+||+|||+|+.+.....               ....+||.+.+ ..|+.++|+||+|++++ +.+..
T Consensus       190 Il~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~g  264 (352)
T 2jii_A          190 IFV---DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG-CGPSRRSDLQSLGYCML-KWLYG  264 (352)
T ss_dssp             EEE---ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHS
T ss_pred             EEE---cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc-CCCCchhhHHHHHHHHH-HHHhC
Confidence            999   5566  899999999987654321               12228888766 46889999999965543 32210


Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc---C----------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---G----------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~---~----------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .      ..|....      .....+......+   .          ...+.+-.+.+-+++..|++.|+++.+.+..+
T Consensus       265 ~------~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  331 (352)
T 2jii_A          265 F------LPWTNCL------PNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL  331 (352)
T ss_dssp             C------CTTGGGT------TCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             C------CCcccCC------cCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence            0      0111100      0122222222111   0          12344444555566788999999999988654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.98  E-value=5.7e-31  Score=248.77  Aligned_cols=249  Identities=20%  Similarity=0.225  Sum_probs=167.8

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      +.....-.++|++.+.||+|+||.||+|.+..+|+.||||++.......  .....+..+..+++.+ +||||+++++++
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~~~~~~~~-~h~~i~~~~~~~   93 (318)
T 2dyl_A           17 GQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE--ENKRILMDLDVVLKSH-DCPYIVQCFGTF   93 (318)
T ss_dssp             SSEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH--HHHHHHHHHHHHHHTT-TCTTBCCEEEEE
T ss_pred             chhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch--HHHHHHHHHHHHHHhc-CCCceeeEEEEE
Confidence            4455666789999999999999999999999999999999997654322  2233344455567777 799999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ...+.+|+||||+ ++.+..+... ...+++..++.++.|++.||.|||+. ||+||||||+||++   +.++.+||+||
T Consensus        94 ~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~df  169 (318)
T 2dyl_A           94 ITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDF  169 (318)
T ss_dssp             ECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCC
T ss_pred             ecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEEC
Confidence            9999999999999 4456555544 45699999999999999999999995 99999999999999   77889999999


Q ss_pred             CCcccccccCC-------CCCCChHHHH----HHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          175 GSALLFEEEGG-------EASDDTSVIL----RMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~----~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      |++........       ....+||.+.    ....|+.++|+||+|+.++ +.+...      ..|      .......
T Consensus       170 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~------~pf------~~~~~~~  236 (318)
T 2dyl_A          170 GISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV-ELATGQ------FPY------KNCKTDF  236 (318)
T ss_dssp             TTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHH-HHHHSS------CTT------TTCCSHH
T ss_pred             CCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHH-HHHhCC------CCC------CCCCccH
Confidence            99976644221       2233899885    2346778999999955543 322100      000      0111112


Q ss_pred             HHHHHHHHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          244 DELRAGLTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       244 ~eL~~~l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +.+...+....      ...+..-.+.+-+++..|+..|+++.+.+.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          237 EVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            22223322211      1234444455556778899999999998764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.98  E-value=6.8e-31  Score=245.54  Aligned_cols=241  Identities=18%  Similarity=0.288  Sum_probs=174.0

Q ss_pred             ceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEE
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVV  105 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv  105 (436)
                      .|.....||+|+||.||+|.+..+++.||||.+.....    .....+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   97 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIF   97 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch----HHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEE
Confidence            34445599999999999999999999999999876532    3345688999999999 699999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          106 MELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       106 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||+++++|.+++....   .+++..++.++.|++.||.|||+.||+||||||+||++.  ..++.+||+|||++.....
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~--~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN--TYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTCCEEECCTTTCEESCC
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE--CCCCCEEEeecccccccCC
Confidence            99999999999998752   367889999999999999999999999999999999993  1267999999999987653


Q ss_pred             cCC--------CCCCChHHHHHH-HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-
Q 042392          183 EGG--------EASDDTSVILRM-KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-  252 (436)
Q Consensus       183 ~~~--------~~~~~pe~~~~~-~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-  252 (436)
                      ...        ....+||.+.+. ..++.++|+||+|+.++ +.+...      ..|...+     ............. 
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~-~l~~g~------~pf~~~~-----~~~~~~~~~~~~~~  243 (295)
T 2clq_A          176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTII-EMATGK------PPFYELG-----EPQAAMFKVGMFKV  243 (295)
T ss_dssp             -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHH-HHHHTS------CTTGGGS-----SHHHHHHHHHHHCC
T ss_pred             CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHH-HHHHCC------CCccCCC-----chhHHHHhhccccc
Confidence            221        112389988764 24788999999965543 322100      0010000     0000000111111 


Q ss_pred             ---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 ---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 ---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                         +....+.+-.+.+-+++..|+..|++..+.+..
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               122334444455556678888999999888753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.98  E-value=4e-31  Score=251.87  Aligned_cols=188  Identities=26%  Similarity=0.334  Sum_probs=155.8

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEE-CCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC------Cee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTE-NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP------NIV   90 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~------niv   90 (436)
                      .+...+.++|++.+.||+|+||.||+|.+ ..+++.||||++...     ......+.+|+.+++.+. |+      +|+
T Consensus         7 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~   80 (339)
T 1z57_A            7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLN-TTDPNSTFRCV   80 (339)
T ss_dssp             STTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBC
T ss_pred             ecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhh-hcCCCCceeeE
Confidence            35667888999999999999999999998 567899999998643     233456789999998884 54      599


Q ss_pred             eceeeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCC---
Q 042392           91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD---  165 (436)
Q Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~---  165 (436)
                      ++++++...+.+|+||||+ +++|.+++...+  ++++..++.++.||+.||.|||++||+||||||+|||+...+.   
T Consensus        81 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  159 (339)
T 1z57_A           81 QMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEA  159 (339)
T ss_dssp             CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEE
T ss_pred             eeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccc
Confidence            9999999999999999999 779999998875  5889999999999999999999999999999999999943111   


Q ss_pred             -------------CCcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          166 -------------NALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       166 -------------~~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                                   ++.+||+|||+|..........     ..+||.+.+ ..|+.++|+||+|+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  224 (339)
T 1z57_A          160 YNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCIL  224 (339)
T ss_dssp             EC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHH
T ss_pred             cCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhC-CCCCcchhhHHHHHHH
Confidence                         5689999999998765432221     228888876 4688999999996554

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.98  E-value=3e-31  Score=252.76  Aligned_cols=251  Identities=14%  Similarity=0.176  Sum_probs=173.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHH--HHHHHhcCCCCCeeeceeeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE--IQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E--~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +....++|++.+.||+|+||.||+|++  +++.||||++....       ......|  +..+..+ +||||+++++.+.
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~   77 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-------RQNFINEKNIYRVPLM-EHDNIARFIVGDE   77 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhc-cCcchhhheeccc
Confidence            345668999999999999999999986  68999999986432       1223334  4334456 6999999997543


Q ss_pred             -----cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---------CcccccCCCCcceeecc
Q 042392           98 -----DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM---------GVMHRDLKPENFCFISR  163 (436)
Q Consensus        98 -----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---------~i~Hrdlkp~Nill~~~  163 (436)
                           ....+|+|||||++|+|.+++.... .++..++.++.||+.||.|||+.         ||+||||||+|||+   
T Consensus        78 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---  153 (336)
T 3g2f_A           78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---  153 (336)
T ss_dssp             EECTTSCEEEEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---
T ss_pred             ccccCCCceEEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---
Confidence                 3346899999999999999997654 68899999999999999999999         99999999999999   


Q ss_pred             CCCCcEEEEecCCcccccccC----------------CCCCCChHHHHH------HHHHHHhhhhhhHHHHHHHhcCChh
Q 042392          164 DDNALLKVTDFGSALLFEEEG----------------GEASDDTSVILR------MKQFRRMSKLKKLTVKVIVEYLPGE  221 (436)
Q Consensus       164 ~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~pe~~~~------~~~~~~~~d~~s~~~~~~~~~l~~e  221 (436)
                      +.++.+||+|||+|+.+....                .....|||.+.+      ...++.++|+||+|+++ .+.+...
T Consensus       154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il-~ell~g~  232 (336)
T 3g2f_A          154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY-WEIFMRC  232 (336)
T ss_dssp             CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHH-HHHHTTB
T ss_pred             cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHH-HHHHhcC
Confidence            777899999999998764321                111228998876      26788999999995554 3332110


Q ss_pred             hHHHHHHHhhhhCCC---------CCCccCHHHHHHHHHhcCC--CCC---------HHHH-HHHHHHHcCCCCCcccHH
Q 042392          222 ETQALKEKFIEMDTD---------KNGTLSYDELRAGLTKVGS--MLT---------EFDV-KQLMEAADMDGNGAIDYT  280 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~---------~~g~i~~~eL~~~l~~~~~--~~s---------~~~i-~~l~~~~d~d~~g~i~~~  280 (436)
                      .     ..|......         ..+....+++.........  .++         ..++ +.+.+++..|++.|++..
T Consensus       233 ~-----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  307 (336)
T 3g2f_A          233 T-----DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ  307 (336)
T ss_dssp             G-----GGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             C-----cCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchH
Confidence            0     001000000         0112233334333332211  111         1134 445556788889999999


Q ss_pred             HHHHHHHhhh
Q 042392          281 EFTAATIQRQ  290 (436)
Q Consensus       281 EF~~~~~~~~  290 (436)
                      |.+..+....
T Consensus       308 e~l~~L~~ll  317 (336)
T 3g2f_A          308 XAEERMAELM  317 (336)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9988766543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-31  Score=257.42  Aligned_cols=238  Identities=18%  Similarity=0.214  Sum_probs=167.9

Q ss_pred             ceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee-cCCe
Q 042392           26 HYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE-DETA  101 (436)
Q Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-~~~~  101 (436)
                      .|++.+.||+|+||.||+|++..+   +..||+|.+.....   ......+.+|+.+++.+ +||||+++++++. ..+.
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~  165 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---IGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS  165 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC---SHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence            588999999999999999997543   34689998865322   23456789999999999 6999999999864 4567


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .|+||||+++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM  242 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred             eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeeccccccc
Confidence            899999999999999998654 48899999999999999999999999999999999999   77889999999999865


Q ss_pred             cccCCC------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCC-hhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          181 EEEGGE------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       181 ~~~~~~------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~-~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      ......            ...+||.+.+ ..|+.++|+||+|++++ +.++ ...      .|   .    + .+..++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~-ellt~~~~------p~---~----~-~~~~~~~  306 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLW-ELMTRGAP------PY---P----D-VNTFDIT  306 (373)
T ss_dssp             ---------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTTSCC------SC---T----T-SCSSCHH
T ss_pred             cccccccccccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHHHH-HHHhCcCC------CC---C----C-CCHHHHH
Confidence            432110            1238888875 56889999999955543 3221 110      00   0    0 0011111


Q ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          248 AGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       248 ~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+..-     ....+..-.+.+.+++..|++.|+++.|.+..+
T Consensus       307 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L  350 (373)
T 3c1x_A          307 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI  350 (373)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            111110     112334334445556778888999999988654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=7.3e-32  Score=259.55  Aligned_cols=185  Identities=25%  Similarity=0.318  Sum_probs=140.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      .....++|++.+.||+|+||.||+|++..+|+.||||++.......     ....+++..++.+ +||||+++++++...
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~l~~l-~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-----NRELQIMQDLAVL-HHPNIVQLQSYFYTL   91 (360)
T ss_dssp             HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC-----CHHHHHHHHHHHH-CCTTBCCEEEEEEEE
T ss_pred             chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-----HHHHHHHHHHHhc-CCCCcccHHHhhhcc
Confidence            3456678999999999999999999999999999999986653322     2456777888888 699999999998654


Q ss_pred             Ce-------EEEEEeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH--HcCcccccCCCCcceeeccCCC
Q 042392          100 TA-------VHVVMELCQGGDLFDRII----AKGYYSERDAAPVLRAIVNAVNVCH--SMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus       100 ~~-------~~iv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH--~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      +.       +++||||+++ +|...+.    ....+++..++.++.|++.||.|||  ++||+||||||+|||+.  ..+
T Consensus        92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~  168 (360)
T 3e3p_A           92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EAD  168 (360)
T ss_dssp             CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTT
T ss_pred             ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCC
Confidence            33       8999999986 6655554    3456899999999999999999999  99999999999999993  137


Q ss_pred             CcEEEEecCCcccccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          167 ALLKVTDFGSALLFEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +.+||+|||+|+.........       ..|||++.+...|+.++|+||+|+++
T Consensus       169 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il  222 (360)
T 3e3p_A          169 GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIF  222 (360)
T ss_dssp             TEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             CcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHH
Confidence            899999999998775433221       22899987766789999999996654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=6.6e-31  Score=269.35  Aligned_cols=241  Identities=18%  Similarity=0.183  Sum_probs=177.5

Q ss_pred             cccceeeee-eecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           23 VMLHYSFGR-MLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        23 ~~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...++.+.+ .||+|+||.||+|.+.  .++..||||++.....   ......+.+|+.+|+.+ +||||+++++++.. 
T Consensus       333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-  407 (613)
T 2ozo_A          333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---KADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-  407 (613)
T ss_dssp             CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS---STTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-
T ss_pred             cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-
Confidence            344566666 8999999999999875  3566799999976532   23456789999999999 69999999999976 


Q ss_pred             CeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+|||||++|+|.+++... ..+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl---~~~~~vkL~DFGla~  484 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSK  484 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCSTTT
T ss_pred             CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE---cCCCcEEEeeccCcc
Confidence            5699999999999999999754 459999999999999999999999999999999999999   667899999999998


Q ss_pred             cccccCC-----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          179 LFEEEGG-----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       179 ~~~~~~~-----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      .+.....           ....|||++.+ ..|+.++|+||+|+.++ +.++             ....+-...+..++.
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l~-ellt-------------~G~~Pf~~~~~~~~~  549 (613)
T 2ozo_A          485 ALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMW-EALS-------------YGQKPYKKMKGPEVM  549 (613)
T ss_dssp             TCC--------------CCTTSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCSHHHH
T ss_pred             cccCCCceeeeccCCCCccceeCHhhhcC-CCCCcHHHHHHHHHHHH-HHHH-------------CCCCCCCCCCHHHHH
Confidence            7643211           12348998865 57889999999955543 3321             001111112223333


Q ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          248 AGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       248 ~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+..-     ....+.+-.+.+.+++..|.+.|.++.+.+..+
T Consensus       550 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L  593 (613)
T 2ozo_A          550 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  593 (613)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            333321     122334444445556788899999999988654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=1e-30  Score=246.60  Aligned_cols=245  Identities=20%  Similarity=0.209  Sum_probs=177.9

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCC-CCCeeeceeeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG-QPNIVELKSAHE   97 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~   97 (436)
                      .......+|++.+.||+|+||.||+|.+. +++.||||++......  ......+.+|+.+++.+.+ ||||+++++++.
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~   98 (313)
T 3cek_A           22 SMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD--NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI   98 (313)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCC--HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred             eeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccccc--ccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence            34556678999999999999999999985 5889999999765432  3445678999999999953 699999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ....+|+|||+ .+++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++   + ++.+||+|||++
T Consensus        99 ~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~-~~~~kL~Dfg~~  173 (313)
T 3cek_A           99 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIA  173 (313)
T ss_dssp             CSSEEEEEECC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---E-TTEEEECCCSSS
T ss_pred             cCCEEEEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---E-CCeEEEeecccc
Confidence            99999999994 577999999998889999999999999999999999999999999999999   3 378999999999


Q ss_pred             ccccccCC----------CCCCChHHHHHH----------HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCC
Q 042392          178 LLFEEEGG----------EASDDTSVILRM----------KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDK  237 (436)
Q Consensus       178 ~~~~~~~~----------~~~~~pe~~~~~----------~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~  237 (436)
                      ........          ....+||.+.+.          ..++.++|+||+|+.++ +.+...      ..|      .
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~-el~~g~------~pf------~  240 (313)
T 3cek_A          174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGK------TPF------Q  240 (313)
T ss_dssp             CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH-HHHHSS------CTT------T
T ss_pred             ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH-HHHhCC------Cch------h
Confidence            87654321          112389988652          46788999999965543 322100      000      0


Q ss_pred             CCccCHHHHHHHHHh-----cCCCCCHHHHHH-HHHHHcCCCCCcccHHHHHHH
Q 042392          238 NGTLSYDELRAGLTK-----VGSMLTEFDVKQ-LMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       238 ~g~i~~~eL~~~l~~-----~~~~~s~~~i~~-l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...-....+...+..     +....+ .++.. +-+++..|+..|++..|.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          241 QIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             TCCSHHHHHHHHHCTTSCCCCCCCSC-HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hHHHHHHHHHHHHhcccccCCcccch-HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            000011112222111     111222 34444 445678899999999998865

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=6.3e-31  Score=255.12  Aligned_cols=188  Identities=21%  Similarity=0.254  Sum_probs=156.3

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC-----Ceeec
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP-----NIVEL   92 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-----niv~~   92 (436)
                      ...+.+.++|++.+.||+|+||.||+|++..+++.||||++...     ......+.+|+.+++.+..|+     +|+++
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            45567789999999999999999999999999999999998643     233456778888888885455     49999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH--HcCcccccCCCCcceeeccCCCCc
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCH--SMGVMHRDLKPENFCFISRDDNAL  168 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH--~~~i~Hrdlkp~Nill~~~~~~~~  168 (436)
                      ++++...+.+|+||||+++ +|.+++...  ..+++..++.++.|++.||.|||  ..||+||||||+|||+.. +.++.
T Consensus       122 ~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~  199 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSA  199 (382)
T ss_dssp             EEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCC
T ss_pred             eeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCc
Confidence            9999999999999999965 999999876  35899999999999999999999  579999999999999942 23678


Q ss_pred             EEEEecCCcccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          169 LKVTDFGSALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       169 ~kl~DFG~a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +||+|||+|+........     ...|||++.+. .|+.++|+||+|+++
T Consensus       200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il  248 (382)
T 2vx3_A          200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGM-PYDLAIDMWSLGCIL  248 (382)
T ss_dssp             EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTC-CCCTHHHHHHHHHHH
T ss_pred             EEEEeccCceecccccccccCCccccChHHHcCC-CCCcHHHHHHHHHHH
Confidence            999999999877543222     12289988764 688999999995554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=4e-31  Score=262.69  Aligned_cols=185  Identities=26%  Similarity=0.319  Sum_probs=154.9

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.......      .+.+|+.+++.|.+|++|+.+..++.....
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~------~~~~E~~il~~L~~~~~i~~i~~~~~~~~~   77 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP------QLLYESKIYRILQGGTGIPNVRWFGVEGDY   77 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC------CHHHHHHHHHHTTTSTTCCCEEEEEEETTE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH------HHHHHHHHHHHhcCCCCCCeEEEEEeeCCE
Confidence            46678999999999999999999999999999999887654332      477899999999655777777777788889


Q ss_pred             EEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .|+||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||+|+.+
T Consensus        78 ~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           78 NVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99999999 8899999986 456999999999999999999999999999999999999954346789999999999876


Q ss_pred             cccCCC---------------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          181 EEEGGE---------------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       181 ~~~~~~---------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ......               ...+||.+.+ ..|+.++|+|++|++++
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDvwSlGvil~  204 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLG-IEQSRRDDLESLGYVLM  204 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHH
T ss_pred             cCCccccccccccccccCCCccccCHHHhcC-CCCChHHHHHHHHHHHH
Confidence            543221               1228888776 46889999999966543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=6.2e-31  Score=249.47  Aligned_cols=184  Identities=21%  Similarity=0.274  Sum_probs=150.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEEC-CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeee--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTEN-STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHE--   97 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~--   97 (436)
                      ...+|++.+.||+|+||.||+|++. .+++.||+|++.......  .....+.+|+.+++.+.  +||||+++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence            4578999999999999999999995 678999999987543221  11224567777777663  5999999999987  


Q ss_pred             ---cCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           98 ---DETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        98 ---~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                         ....+++||||++ |+|.+++....  .+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~  162 (326)
T 1blx_A           87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLA  162 (326)
T ss_dssp             ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEEC
T ss_pred             ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEe
Confidence               5577999999998 59999998754  38999999999999999999999999999999999999   778899999


Q ss_pred             ecCCcccccccC-------CCCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEG-------GEASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~-------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      |||++.......       .....+||.+.+ ..|+.++|+||+|+.+
T Consensus       163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il  209 (326)
T 1blx_A          163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIF  209 (326)
T ss_dssp             SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             cCcccccccCCCCccccccccceeCHHHHhc-CCCCcchhHHHHHHHH
Confidence            999998765322       112238888876 4578899999996554

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=5.3e-31  Score=247.82  Aligned_cols=179  Identities=24%  Similarity=0.284  Sum_probs=150.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEE
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVM  106 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~  106 (436)
                      |...+.||+|+||.||+|.+  +++.||||++..............+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEEE
Confidence            44569999999999999985  68899999987654333234567789999999999 6999999999999999999999


Q ss_pred             eccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          107 ELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       107 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||+++++|.+++...   .++++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~  186 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF  186 (307)
T ss_dssp             ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCSC
T ss_pred             EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeecccccccccc
Confidence            999999999999743   458999999999999999999999999999999999999   77889999999999876432


Q ss_pred             CC----------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GG----------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ..          ....+||.+.+  .++.++|+||+|+.+
T Consensus       187 ~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~Dv~slG~il  224 (307)
T 2nru_A          187 AQTVMTSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVL  224 (307)
T ss_dssp             SSCEECSSCCSCGGGCCHHHHTT--EECTHHHHHHHHHHH
T ss_pred             cccccccccCCCcCcCChHHhcC--CCCccchhHHHHHHH
Confidence            11          11228998765  578899999996654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=5.5e-32  Score=259.15  Aligned_cols=189  Identities=17%  Similarity=0.258  Sum_probs=157.0

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchh-------------hHHHHHHHHHHHHHhcCC
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-------------ENDMMIRREIQIRRLLSG   85 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~~   85 (436)
                      ......++|++.+.||+|+||.||+|.+  +++.||||++.........             .....+.+|+.+++.+ +
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~  101 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-K  101 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-C
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-C
Confidence            4455678999999999999999999998  8999999998754321100             1116788999999999 6


Q ss_pred             CCCeeeceeeeecCCeEEEEEeccCCCChHHH------HHH--cCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCC
Q 042392           86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDR------IIA--KGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPE  156 (436)
Q Consensus        86 h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~------l~~--~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~  156 (436)
                      ||||+++++++...+.+|+||||+++|+|.++      +..  ...+++..++.++.||+.||.|||+ +||+||||||+
T Consensus       102 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~  181 (348)
T 2pml_X          102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPS  181 (348)
T ss_dssp             CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGG
T ss_pred             CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChH
Confidence            99999999999999999999999999999998      655  4569999999999999999999999 99999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccccccCC------CCCCChHHHHHHHHHHH-hhhhhhHHHHH
Q 042392          157 NFCFISRDDNALLKVTDFGSALLFEEEGG------EASDDTSVILRMKQFRR-MSKLKKLTVKV  213 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~pe~~~~~~~~~~-~~d~~s~~~~~  213 (436)
                      ||++   +.++.+||+|||++........      ....+||.+.+...|+. ++|+||+|+.+
T Consensus       182 Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  242 (348)
T 2pml_X          182 NILM---DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL  242 (348)
T ss_dssp             GEEE---CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHH
T ss_pred             hEEE---cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHH
Confidence            9999   7788999999999987643211      12238998876535544 99999995544

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.4e-31  Score=252.43  Aligned_cols=255  Identities=15%  Similarity=0.176  Sum_probs=176.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-CCCCeeeceeeee
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQPNIVELKSAHE   97 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~~   97 (436)
                      ....+.++|++.+.||+|+||.||+|++.  ++.||||++....       .....+|..++..+. +||||+++++++.
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~  101 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-------EASWFRETEIYQTVLMRHENILGFIAADI  101 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-------cchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence            44667789999999999999999999974  8999999985432       233445555554431 6999999999988


Q ss_pred             cC----CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccccCCCCcceeeccCC
Q 042392           98 DE----TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM--------GVMHRDLKPENFCFISRDD  165 (436)
Q Consensus        98 ~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~Hrdlkp~Nill~~~~~  165 (436)
                      ..    ..+|+||||+++|+|.+++... .+++..++.++.|++.||.|||+.        ||+||||||+|||+   +.
T Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~  177 (337)
T 3mdy_A          102 KGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KK  177 (337)
T ss_dssp             ESCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CT
T ss_pred             cCCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CC
Confidence            77    7899999999999999999764 699999999999999999999998        99999999999999   77


Q ss_pred             CCcEEEEecCCcccccccCCC------------CCCChHHHHHHH-----HHHHhhhhhhHHHHHHHhcCChh----hHH
Q 042392          166 NALLKVTDFGSALLFEEEGGE------------ASDDTSVILRMK-----QFRRMSKLKKLTVKVIVEYLPGE----ETQ  224 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~~~~~------------~~~~pe~~~~~~-----~~~~~~d~~s~~~~~~~~~l~~e----~~~  224 (436)
                      ++.+||+|||+|+.+......            ...+||.+.+..     .++.++|+||+|+.+ .+.++..    ...
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~el~tg~~~~~~~~  256 (337)
T 3mdy_A          178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL-WEVARRCVSGGIVE  256 (337)
T ss_dssp             TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH-HHHHTTBCBTTBCC
T ss_pred             CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH-HHHHhccCcccccc
Confidence            889999999999766443211            122899886532     233469999995554 3332110    000


Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHhcC--CCCC--------HHHHH-HHHHHHcCCCCCcccHHHHHHHHHhhh
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVG--SMLT--------EFDVK-QLMEAADMDGNGAIDYTEFTAATIQRQ  290 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~--~~~s--------~~~i~-~l~~~~d~d~~g~i~~~EF~~~~~~~~  290 (436)
                      .....|.   ..........++........  ..+.        ..++. .+.+++..|+..|++..|.+..+....
T Consensus       257 ~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          257 EYQLPYH---DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             CCCCTTT---TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccccHh---hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            0000111   11112233444444333211  1111        12343 444567788999999999988876543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=3.5e-30  Score=245.94  Aligned_cols=255  Identities=16%  Similarity=0.179  Sum_probs=182.6

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHh--cCCCCCeeeceeeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL--LSGQPNIVELKSAHE   97 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~niv~~~~~~~   97 (436)
                      ...+.++|++.+.||+|+||.||+|++  +++.||||++...       ....+.+|+.+++.  + +||||+++++++.
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l-~h~ni~~~~~~~~  106 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-------EERSWFREAEIYQTVML-RHENILGFIAADN  106 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCC-CCTTBCCEEEEEE
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-------hHHHHHHHHHHHHHhhc-CCCcEEEEEeeec
Confidence            455678999999999999999999997  5899999998542       23457789999888  5 6999999999998


Q ss_pred             cCC----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCcccccCCCCcceeeccCC
Q 042392           98 DET----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH--------SMGVMHRDLKPENFCFISRDD  165 (436)
Q Consensus        98 ~~~----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH--------~~~i~Hrdlkp~Nill~~~~~  165 (436)
                      ...    .+|+||||+++|+|.+++.+. .+++..++.++.|++.||.|||        +.+|+||||||+||++   +.
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~  182 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KK  182 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CT
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CC
Confidence            775    799999999999999999764 5999999999999999999999        8999999999999999   77


Q ss_pred             CCcEEEEecCCcccccccCC------------CCCCChHHHHHH-----HHHHHhhhhhhHHHHHHHhcCChhhHHHHHH
Q 042392          166 NALLKVTDFGSALLFEEEGG------------EASDDTSVILRM-----KQFRRMSKLKKLTVKVIVEYLPGEETQALKE  228 (436)
Q Consensus       166 ~~~~kl~DFG~a~~~~~~~~------------~~~~~pe~~~~~-----~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~  228 (436)
                      ++.+||+|||++........            ....+||.+.+.     ..++.++|+||+|+.+ .+.++.........
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il-~el~tg~~~~~~~~  261 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-WEIARRCSIGGIHE  261 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHH-HHHHTTBCBTTBCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHH-HHHHhccCcCCccc
Confidence            88999999999987654321            112289988753     1456899999995544 33332100000000


Q ss_pred             H-hhhhCCCCCCccCHHHHHHHHHhc--CCCCCH--------HHHHHHH-HHHcCCCCCcccHHHHHHHHHhh
Q 042392          229 K-FIEMDTDKNGTLSYDELRAGLTKV--GSMLTE--------FDVKQLM-EAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       229 ~-F~~~D~~~~g~i~~~eL~~~l~~~--~~~~s~--------~~i~~l~-~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      . -..+...........++...+..-  ...+..        ..+..++ +++..|++.|+++.+.+..+...
T Consensus       262 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          262 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            0 000111111223445555544322  122221        2344444 45678899999999998876544

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=1.1e-30  Score=250.44  Aligned_cols=188  Identities=21%  Similarity=0.289  Sum_probs=155.4

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCC------ee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTN-MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN------IV   90 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n------iv   90 (436)
                      .....+.++|++.+.||+|+||.||+|.+..++ ..||+|++...     ......+.+|+.+++.+. |++      ++
T Consensus        12 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~   85 (355)
T 2eu9_A           12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIK-EKDKENKFLCV   85 (355)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHH-HHCTTSCSCBC
T ss_pred             ccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHh-hcCCCCceeEE
Confidence            456678899999999999999999999998877 68999998643     234456788999999984 655      99


Q ss_pred             eceeeeecCCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc-----
Q 042392           91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR-----  163 (436)
Q Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~-----  163 (436)
                      .+++++...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+...     
T Consensus        86 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~  164 (355)
T 2eu9_A           86 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL  164 (355)
T ss_dssp             CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEE
T ss_pred             EeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccc
Confidence            9999999999999999999 568888887754  59999999999999999999999999999999999999432     


Q ss_pred             -----------CCCCcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          164 -----------DDNALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       164 -----------~~~~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                                 +..+.+||+|||+|+.........     ..+||++.+ ..|+.++|+||+|+++
T Consensus       165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il  229 (355)
T 2eu9_A          165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCIL  229 (355)
T ss_dssp             ECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHH
T ss_pred             ccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeec-CCCCCccchHHHHHHH
Confidence                       246789999999998754432221     228998875 4688899999996554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=8.6e-32  Score=260.17  Aligned_cols=187  Identities=13%  Similarity=0.097  Sum_probs=139.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-CCCCeeece-------
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQPNIVELK-------   93 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~-------   93 (436)
                      ....+|++.+.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+++.|. +||||++++       
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~  137 (371)
T 3q60_A           59 QGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS-RSELERLHEATFAAARLLGESPEEARDRRRLLLPS  137 (371)
T ss_dssp             CCEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH-HHHHHHHHHHHHHHHHHHC----------CBCCCC
T ss_pred             CCceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc-ccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee
Confidence            34456999999999999999999999999999999998765432 345567788876666663 499988855       


Q ss_pred             eeeecC-----------------CeEEEEEeccCCCChHHHHHHcC-CCCHHHH------HHHHHHHHHHHHHHHHcCcc
Q 042392           94 SAHEDE-----------------TAVHVVMELCQGGDLFDRIIAKG-YYSERDA------APVLRAIVNAVNVCHSMGVM  149 (436)
Q Consensus        94 ~~~~~~-----------------~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~------~~~~~qi~~~l~~lH~~~i~  149 (436)
                      +++..+                 ..+|+|||||+ |+|.+++...+ .++....      ..++.||+.||.|||++||+
T Consensus       138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~iv  216 (371)
T 3q60_A          138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLV  216 (371)
T ss_dssp             EEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCc
Confidence            444332                 34899999998 79999998743 3444444      56779999999999999999


Q ss_pred             cccCCCCcceeeccCCCCcEEEEecCCcccccccC-----CCCCCChHHHHH-HHHHHHhhhhhhHHHHH
Q 042392          150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG-----GEASDDTSVILR-MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       150 Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~pe~~~~-~~~~~~~~d~~s~~~~~  213 (436)
                      ||||||+|||+   +.++.+||+|||+|+......     .....|||.+.+ ...|+.++|+||+|+++
T Consensus       217 HrDikp~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il  283 (371)
T 3q60_A          217 HGHFTPDNLFI---MPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI  283 (371)
T ss_dssp             ETTCSGGGEEE---CTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHH
T ss_pred             cCcCCHHHEEE---CCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHH
Confidence            99999999999   778899999999998765432     122238998864 24688999999996554

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=2.3e-30  Score=243.57  Aligned_cols=237  Identities=21%  Similarity=0.248  Sum_probs=168.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++.+.||+|+||.||+|++.  ++.||||.+...      .....+.+|+.+++.+ +||||+++++++.+  ..|
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~   75 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE------SERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVC   75 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST------THHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh------hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcE
Confidence            468999999999999999999974  788999998543      2345788999999999 69999999999874  479


Q ss_pred             EEEeccCCCChHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH---cCcccccCCCCcceeeccCCCCc-EEEEecCC
Q 042392          104 VVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHS---MGVMHRDLKPENFCFISRDDNAL-LKVTDFGS  176 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~---~~i~Hrdlkp~Nill~~~~~~~~-~kl~DFG~  176 (436)
                      +||||+++|+|.+++.....   ++...+..++.|++.||.|||+   +||+||||||+||++   +.++. +||+|||+
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~~kl~Dfg~  152 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTVLKICDFGT  152 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE---ETTTTEEEECCCCC
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE---eCCCCEEEEccccc
Confidence            99999999999999986543   7889999999999999999999   899999999999999   44554 89999999


Q ss_pred             cccccccC-----CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          177 ALLFEEEG-----GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       177 a~~~~~~~-----~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      +.......     .....+||.+.+ ..++.++|+||+|+.++ +.++..      ..|...     +. ....+.....
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~-el~~g~------~p~~~~-----~~-~~~~~~~~~~  218 (307)
T 2eva_A          153 ACDIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILW-EVITRR------KPFDEI-----GG-PAFRIMWAVH  218 (307)
T ss_dssp             ------------CCTTSSCHHHHTC-CCCCTHHHHHHHHHHHH-HHHHTC------CTTTTT-----CS-SHHHHHHHHH
T ss_pred             ccccccccccCCCCCceEChhhhCC-CCCCcHHHHHHHHHHHH-HHHHCC------CCchhh-----Cc-cHHHHHHHHh
Confidence            97664322     122338988865 46788999999965543 322100      001000     00 1111111111


Q ss_pred             h-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          252 K-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       252 ~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .     .....+..-.+.+-+++..|+..|+++.|.+..+..
T Consensus       219 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  260 (307)
T 2eva_A          219 NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH  260 (307)
T ss_dssp             TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            1     112233333444555677888899999998876543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=3.5e-30  Score=265.70  Aligned_cols=247  Identities=19%  Similarity=0.191  Sum_probs=183.2

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCC---CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENST---NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ++...++|++.+.||+|+||.||+|.+..+   +..||||.+.....   ......+.+|+.+++.+ +||||+++++++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~  460 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMRQF-DHPHIVKLIGVI  460 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC---HHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            455667899999999999999999998654   45799998765332   34456789999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      . .+.+|+||||+++|+|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl---~~~~~vkL~DFG  536 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFG  536 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCC
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE---eCCCCEEEEecC
Confidence            5 466899999999999999998754 58999999999999999999999999999999999999   567899999999


Q ss_pred             CcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          176 SALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       176 ~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      +|+.......         ....|||.+.+ ..|+.++|+||+|++++ +.+..             ...+-......++
T Consensus       537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~-ellt~-------------g~~Pf~~~~~~~~  601 (656)
T 2j0j_A          537 LSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMW-EILMH-------------GVKPFQGVKNNDV  601 (656)
T ss_dssp             CCCSCCC----------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT-------------SCCTTTTCCHHHH
T ss_pred             CCeecCCCcceeccCCCCCcceeCHHHhcC-CCCCchhhHHHHHHHHH-HHHHc-------------CCCCCCCCCHHHH
Confidence            9987654321         11338998865 47889999999965543 32210             0001011122223


Q ss_pred             HHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          247 RAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       247 ~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ...+..     +....+..-.+.+-+++..|++.|+++.|.+..+...
T Consensus       602 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          602 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            222222     1123334444555567788899999999998766443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=1.5e-30  Score=251.63  Aligned_cols=195  Identities=19%  Similarity=0.260  Sum_probs=156.9

Q ss_pred             cccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC------
Q 042392           11 QRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS------   84 (436)
Q Consensus        11 ~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~------   84 (436)
                      ..+|++.. ......+|++.+.||+|+||.||+|++..+++.||||++...     ......+.+|+.+++.+.      
T Consensus         6 ~~~p~~~~-~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~   79 (373)
T 1q8y_A            6 GYHPAFKG-EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTK   79 (373)
T ss_dssp             -CCCCCTT-CEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSH
T ss_pred             CceeeecC-CcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccc
Confidence            45565422 233457899999999999999999999999999999998643     233456788999988873      


Q ss_pred             ----CCCCeeeceeeeecCC----eEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CcccccC
Q 042392           85 ----GQPNIVELKSAHEDET----AVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDL  153 (436)
Q Consensus        85 ----~h~niv~~~~~~~~~~----~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdl  153 (436)
                          +||||+++++++...+    .+++||||+ +++|.+++...  ..+++..++.++.||+.||.|||++ ||+||||
T Consensus        80 ~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Di  158 (373)
T 1q8y_A           80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDI  158 (373)
T ss_dssp             HHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCC
T ss_pred             hhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence                2899999999987654    789999999 78999999874  4499999999999999999999998 9999999


Q ss_pred             CCCcceeecc---CCCCcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          154 KPENFCFISR---DDNALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       154 kp~Nill~~~---~~~~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ||+|||+...   +..+.+||+|||+|..........     ..|||++.+ ..|+.++|+||+|+++
T Consensus       159 kp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il  225 (373)
T 1q8y_A          159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLI  225 (373)
T ss_dssp             SGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHH
T ss_pred             ChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhC-CCCCchHhHHHHHHHH
Confidence            9999999532   234479999999998765432221     228998876 4578999999996554

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.3e-31  Score=275.58  Aligned_cols=183  Identities=22%  Similarity=0.259  Sum_probs=151.4

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...+.++|++.+.||+|+||.||+|.+.. +++.||||++.....   ......+.+|+.+++.+ +||||+++++++..
T Consensus        75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~  150 (681)
T 2pzi_A           75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD---AEAQAMAMAERQFLAEV-VHPSIVQIFNFVEH  150 (681)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC---HHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEE
T ss_pred             CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC---HHHHHHHHHHHHHHHhc-CCCCcCeEeeeEee
Confidence            45677899999999999999999999976 789999999865422   34456788999999999 69999999999987


Q ss_pred             CCe-----EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           99 ETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        99 ~~~-----~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      .+.     .|+||||++|++|.+++..  ++++..++.++.||+.||.|||++||+||||||+|||+   +. +.+||+|
T Consensus       151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll---~~-~~~kl~D  224 (681)
T 2pzi_A          151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML---TE-EQLKLID  224 (681)
T ss_dssp             ECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CS-SCEEECC
T ss_pred             cCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE---eC-CcEEEEe
Confidence            655     7999999999999987754  69999999999999999999999999999999999999   44 4899999


Q ss_pred             cCCcccccccCCC----CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          174 FGSALLFEEEGGE----ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       174 FG~a~~~~~~~~~----~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ||+++........    ...+||.+.+  .++.++|+||+|++++
T Consensus       225 FG~a~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~  267 (681)
T 2pzi_A          225 LGAVSRINSFGYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLA  267 (681)
T ss_dssp             CTTCEETTCCSCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHH
T ss_pred             cccchhcccCCccCCCccccCHHHHcC--CCCCceehhhhHHHHH
Confidence            9999877654222    2338998865  3478999999966553

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=6.7e-31  Score=249.48  Aligned_cols=188  Identities=18%  Similarity=0.201  Sum_probs=144.0

Q ss_pred             ccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHH-HHHhcCCCCCeeeceeee
Q 042392           18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-IRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~   96 (436)
                      ..+....++|++.+.||+|+||.||+|.+..+|+.||||++.....   ......+.+|+. +++.+ +||||+++++++
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~   90 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSS-DCPYIVQFYGAL   90 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSC-CCTTBCCEEEEE
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcC-CCCcEeeeeeEE
Confidence            3456667899999999999999999999999999999999976532   223345566666 55666 799999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHc-CcccccCCCCcceeeccCCCCcEE
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIA-----KGYYSERDAAPVLRAIVNAVNVCHSM-GVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                      ...+..|+||||+++ +|.+++..     ...+++..+..++.|++.||.|||+. ||+||||||+||++   +.++.+|
T Consensus        91 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~k  166 (327)
T 3aln_A           91 FREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIK  166 (327)
T ss_dssp             ECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEE
T ss_pred             EeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEE
Confidence            999999999999986 88888764     45689999999999999999999998 99999999999999   6788999


Q ss_pred             EEecCCcccccccCCC-------CCCChHHHH---HHHHHHHhhhhhhHHHHH
Q 042392          171 VTDFGSALLFEEEGGE-------ASDDTSVIL---RMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       171 l~DFG~a~~~~~~~~~-------~~~~pe~~~---~~~~~~~~~d~~s~~~~~  213 (436)
                      |+|||++.........       ...+||.+.   ....|+.++|+||+|+.+
T Consensus       167 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il  219 (327)
T 3aln_A          167 LCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL  219 (327)
T ss_dssp             ECCCSSSCC------------------------------CCSHHHHHHHHHHH
T ss_pred             EccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHH
Confidence            9999999876543221       223888874   334578899999996544

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=9.3e-31  Score=257.38  Aligned_cols=203  Identities=18%  Similarity=0.194  Sum_probs=143.8

Q ss_pred             CCcccCCCcccccccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHH
Q 042392            1 MGCCVSKSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR   80 (436)
Q Consensus         1 ~~~~~~~~~~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l   80 (436)
                      ||.+.+.++....... .....-..+|.+.++||+|+||+|+. ....+++.||||++......       .+.+|+.++
T Consensus         1 M~ss~s~~~~~~~~~~-~~~~i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~-------~~~~E~~~l   71 (432)
T 3p23_A            1 MGSSPSLEQDDGDEET-SVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS-------FADREVQLL   71 (432)
T ss_dssp             ------------------CEEETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE-------ECHHHHHHH
T ss_pred             CCCCcccccCcCcccC-CcEEEccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH-------HHHHHHHHH
Confidence            7777766665543221 12233334699999999999999764 33468999999998654332       246899999


Q ss_pred             HhcCCCCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcce
Q 042392           81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFC  159 (436)
Q Consensus        81 ~~l~~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nil  159 (436)
                      +.+.+||||+++++++.....+|+|||||.| +|.+++.... ..++..++.++.||+.||.|||++||+||||||+|||
T Consensus        72 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIl  150 (432)
T 3p23_A           72 RESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNIL  150 (432)
T ss_dssp             HHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEE
T ss_pred             HhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEE
Confidence            9985699999999999999999999999975 9999998654 3566678899999999999999999999999999999


Q ss_pred             eeccC--CCCcEEEEecCCcccccccC-----------CCCCCChHHHHH--HHHHHHhhhhhhHHHHH
Q 042392          160 FISRD--DNALLKVTDFGSALLFEEEG-----------GEASDDTSVILR--MKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       160 l~~~~--~~~~~kl~DFG~a~~~~~~~-----------~~~~~~pe~~~~--~~~~~~~~d~~s~~~~~  213 (436)
                      +...+  ....+||+|||+|+......           .....|||++.+  ...++.++|+||+|+++
T Consensus       151 l~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il  219 (432)
T 3p23_A          151 ISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF  219 (432)
T ss_dssp             ECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHH
T ss_pred             EecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHH
Confidence            95322  23468899999998765321           122239998864  34566789999995544

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=5.8e-31  Score=248.88  Aligned_cols=250  Identities=17%  Similarity=0.223  Sum_probs=179.3

Q ss_pred             cccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           15 ILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      .....++...++|++.+.||+|+||.||+|.+..   .||+|++.......  .....+.+|+.+++.+ +||||+++++
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~   96 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNE--DQLKAFKREVMAYRQT-RHENVVLFMG   96 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCC--CCCCCCCTTGGGGTTC-CCTTBCCCCE
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCH--HHHHHHHHHHHHHhcC-CCCCEeEEEE
Confidence            3345677788999999999999999999999853   59999987653222  2223467899999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEe
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTD  173 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~D  173 (436)
                      ++.....+++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++   + ++.+||+|
T Consensus        97 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~---~-~~~~~l~D  172 (319)
T 2y4i_B           97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---D-NGKVVITD  172 (319)
T ss_dssp             EEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE---C---CCEECC
T ss_pred             EEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE---e-CCCEEEee
Confidence            9999999999999999999999997754 58999999999999999999999999999999999999   4 57899999


Q ss_pred             cCCcccccccC-------------CCCCCChHHHHHH--------HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhh
Q 042392          174 FGSALLFEEEG-------------GEASDDTSVILRM--------KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIE  232 (436)
Q Consensus       174 FG~a~~~~~~~-------------~~~~~~pe~~~~~--------~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~  232 (436)
                      ||++.......             .....+||.+.+.        ..|+.++|+||+|+.+ .+.++.            
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il-~el~~g------------  239 (319)
T 2y4i_B          173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW-YELHAR------------  239 (319)
T ss_dssp             CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHH-HHHHHS------------
T ss_pred             cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHH-HHHHhC------------
Confidence            99987653211             1112389988642        3478899999996544 333210            


Q ss_pred             hCCCCCCccCHHHHHHHHHh-cC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          233 MDTDKNGTLSYDELRAGLTK-VG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~-~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                        ..+-...+..++...+.. ..     ...+.+-.+.+.+++..|.+.|+++.+.+..+...
T Consensus       240 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l  300 (319)
T 2y4i_B          240 --EWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL  300 (319)
T ss_dssp             --SCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred             --CCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence              011111122222222211 11     11233334455566788889999999988776543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=5.1e-30  Score=252.65  Aligned_cols=186  Identities=20%  Similarity=0.290  Sum_probs=145.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+...|.+.+.||+|+||+||.+. ..+|+.||||++....       ...+.+|+.+++.+.+||||+++++++...
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~   81 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF-------CDIALMEIKLLTESDDHPNVIRYYCSETTD   81 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECS
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecC
Confidence            34466678889999999999998754 4679999999986432       245678999998765799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCC-------CHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc---------
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYY-------SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR---------  163 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~---------  163 (436)
                      +.+|+|||||. |+|.+++......       ++..++.++.||+.||.|||++||+||||||+|||+...         
T Consensus        82 ~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~  160 (434)
T 2rio_A           82 RFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT  160 (434)
T ss_dssp             SEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTT
T ss_pred             CeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccccc
Confidence            99999999996 5999999875432       333567899999999999999999999999999999532         


Q ss_pred             -CCCCcEEEEecCCcccccccCC------------CCCCChHHHHH------HHHHHHhhhhhhHHHHHH
Q 042392          164 -DDNALLKVTDFGSALLFEEEGG------------EASDDTSVILR------MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       164 -~~~~~~kl~DFG~a~~~~~~~~------------~~~~~pe~~~~------~~~~~~~~d~~s~~~~~~  214 (436)
                       +..+.+||+|||+|+.......            ....|||++.+      ...++.++|+||+|++++
T Consensus       161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~  230 (434)
T 2rio_A          161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY  230 (434)
T ss_dssp             CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred             CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence             2345899999999987654321            12238998865      246789999999955543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=2e-30  Score=262.75  Aligned_cols=175  Identities=15%  Similarity=0.141  Sum_probs=126.3

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc------chhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM------KYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      .....+.|+.|.+..++....|+.||+|++.+....      ........+.+|+++|+++.+||||+++++++++.+.+
T Consensus       238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~  317 (569)
T 4azs_A          238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG  317 (569)
T ss_dssp             EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred             hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence            344577888888888887788999999999875322      12334567899999999997899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |||||||+|++|.++|.+.+++++.   .++.||+.||.|+|++|||||||||+|||+   +.++.+||+|||+|+....
T Consensus       318 yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          318 WLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC-
T ss_pred             EEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCC
Confidence            9999999999999999998888765   478999999999999999999999999999   7889999999999987755


Q ss_pred             cCCCCCC--------ChHHHHHHHHHHHhhhhhhHHH
Q 042392          183 EGGEASD--------DTSVILRMKQFRRMSKLKKLTV  211 (436)
Q Consensus       183 ~~~~~~~--------~pe~~~~~~~~~~~~d~~s~~~  211 (436)
                      .......        +||++.+  .+...+|+|++++
T Consensus       392 ~~~~~~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~  426 (569)
T 4azs_A          392 DCSWPTNLVQSFFVFVNELFAE--NKSWNGFWRSAPV  426 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC-----------------
T ss_pred             CCccccCceechhhccHHHhCC--CCCCccccccccc
Confidence            4332221        7888765  4567789999743

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.96  E-value=1.1e-30  Score=265.47  Aligned_cols=190  Identities=22%  Similarity=0.280  Sum_probs=153.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-   98 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-   98 (436)
                      .....++|++.+.||+|+||.||+|.+..+|+.||||++.....   ......+.+|+.+++.+ +||||+++++++.. 
T Consensus         9 pg~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~---~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~   84 (676)
T 3qa8_A            9 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS---PKNRERWCLEIQIMKKL-NHPNVVSAREVPDGL   84 (676)
T ss_dssp             --------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC---HHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTT
T ss_pred             CCCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC---HHHHHHHHHHHHHHHhC-CCCCCCceeeeeccc
Confidence            33455899999999999999999999999999999999865432   34456788999999999 69999999998765 


Q ss_pred             -----CCeEEEEEeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEE
Q 042392           99 -----ETAVHVVMELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus        99 -----~~~~~iv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                           .+..|+|||||+||+|.+++....   .+++..++.++.|++.||.|||+.||+||||||+||++...+....+|
T Consensus        85 ~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vK  164 (676)
T 3qa8_A           85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHK  164 (676)
T ss_dssp             CCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEE
T ss_pred             ccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEE
Confidence                 677899999999999999998754   589999999999999999999999999999999999995433444699


Q ss_pred             EEecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          171 VTDFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       171 l~DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      |+|||+|.........       ...+||.+.+ ..|+.++|+||+|++++
T Consensus       165 L~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIwSLGviLy  214 (676)
T 3qa8_A          165 IIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAF  214 (676)
T ss_dssp             ECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCC-SCCSTTHHHHHHHHHHH
T ss_pred             EcccccccccccccccccccCCcccCChHHhcc-CCCCchhHHHHHHHHHH
Confidence            9999999876543221       2238887765 46889999999966553

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=4.2e-28  Score=237.43  Aligned_cols=240  Identities=10%  Similarity=-0.003  Sum_probs=159.8

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-CCeeece---------
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-PNIVELK---------   93 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~---------   93 (436)
                      ...|++.+.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+++.+. | +|...+.         
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCC
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-HHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccch
Confidence            345889999999999999999999999999999987443322 233566889999999984 5 3222111         


Q ss_pred             ------------eeeec-----CCeEEEEEeccCCCChHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHcCcc
Q 042392           94 ------------SAHED-----ETAVHVVMELCQGGDLFDRIIA-------KGYYSERDAAPVLRAIVNAVNVCHSMGVM  149 (436)
Q Consensus        94 ------------~~~~~-----~~~~~iv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  149 (436)
                                  .++..     ...++++|+++ +++|.+++..       ...+++..+..++.||+.||.|||++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii  233 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  233 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                        11111     23468888877 4699998852       12367788889999999999999999999


Q ss_pred             cccCCCCcceeeccCCCCcEEEEecCCcccccccC----CCCCCChHHHHHH---------HHHHHhhhhhhHHHHHHHh
Q 042392          150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG----GEASDDTSVILRM---------KQFRRMSKLKKLTVKVIVE  216 (436)
Q Consensus       150 Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~pe~~~~~---------~~~~~~~d~~s~~~~~~~~  216 (436)
                      ||||||+|||+   +.++.+||+|||+|+......    .....+||.+.+.         ..|+.++|+||+|++++ +
T Consensus       234 HrDiKp~NILl---~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~-e  309 (413)
T 3dzo_A          234 HTYLRPVDIVL---DQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY-W  309 (413)
T ss_dssp             CSCCCGGGEEE---CTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH-H
T ss_pred             cCCcccceEEE---ecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHH-H
Confidence            99999999999   778889999999998664431    1334499998632         34778999999965543 3


Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .++..      ..|...+  .      .+....+......++.+-.+.+-+++..|++.|++..+.+.
T Consensus       310 lltg~------~Pf~~~~--~------~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          310 IWCAD------LPNTDDA--A------LGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHSS------CCCCTTG--G------GSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHCC------CCCCCcc--h------hhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            22100      0010000  0      00000011111234444445555667888999999887765

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.93  E-value=1.3e-26  Score=212.80  Aligned_cols=205  Identities=18%  Similarity=0.238  Sum_probs=166.9

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCH------HHHHHHHHHHcCCCCCcccHHHHHHHHHhh-
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE------FDVKQLMEAADMDGNGAIDYTEFTAATIQR-  289 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~------~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-  289 (436)
                      .+++.+...++.+|..+|.+++|.|+.+||..+++.++..++.      .++..+++.+|.+++|.|+|.||+..+... 
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~   88 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE   88 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred             hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence            4677788899999999999999999999999999988755554      789999999999999999999999887532 


Q ss_pred             --------hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH----HH
Q 042392          290 --------QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK----LV  357 (436)
Q Consensus       290 --------~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  357 (436)
                              ........++.+|+.+|+|++|+|+..||..++..+.          ...|.     .++..++..    ++
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~----------~~~g~-----~~~~~~~~~~~~~~~  153 (263)
T 2f33_A           89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLL----------EKANK-----TVDDTKLAEYTDLML  153 (263)
T ss_dssp             THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHH----------HHHTS-----CCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHH----------hhcCC-----CCCHHHHHHHHHHHH
Confidence                    3345677899999999999999999999976533320          00122     223334444    99


Q ss_pred             HccccCCCCcccHHHHHHHHHh-------h-hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC----C-ChHHH
Q 042392          358 LQGDIDGNGNIDFIEFVNLMTD-------I-YKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM----G-DDATI  424 (436)
Q Consensus       358 ~~~d~~~~g~i~f~EF~~~~~~-------~-~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~----~-~~~e~  424 (436)
                      +.+|.|++|.|+|+||+.++..       . ......+.++.+|+.||+|++|+||.+||+.++..++.    . +++++
T Consensus       154 ~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~  233 (263)
T 2f33_A          154 KLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNI  233 (263)
T ss_dssp             HHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTH
T ss_pred             HhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHH
Confidence            9999999999999999998764       1 12345678999999999999999999999999988765    5 88999


Q ss_pred             HHHHHh-hccCCC
Q 042392          425 KEIISE-VGRDHK  436 (436)
Q Consensus       425 ~~~~~~-~d~~~d  436 (436)
                      +.+++. +|.|+|
T Consensus       234 ~~~~~~~~D~d~d  246 (263)
T 2f33_A          234 STYKKNIMALSDG  246 (263)
T ss_dssp             HHHHHHHHTTSBT
T ss_pred             HHHHHHhhccCCC
Confidence            999987 688765

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.93  E-value=1.4e-26  Score=217.99  Aligned_cols=189  Identities=19%  Similarity=0.287  Sum_probs=168.4

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhcc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLER  294 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~  294 (436)
                      +..++++++..+..+|..+|.+++|.|+..||..++..+|..++..++..++..+|.+++|.|+|.+|+...      ..
T Consensus       113 ~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~------~~  186 (323)
T 1ij5_A          113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA------ND  186 (323)
T ss_dssp             CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSH------HH
T ss_pred             HHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhh------hH
Confidence            456789999999999999999999999999999999999999999999999999999999999999998653      23


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH-HHHccccCCCCcccHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK-LVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~g~i~f~EF  373 (436)
                      ...++.+|+.+|.|++|+|+..||..++  +                   +..++..++.. ++..+|.|++|.|+|+||
T Consensus       187 ~~~l~~~F~~~D~d~dG~Is~~El~~~l--~-------------------g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF  245 (323)
T 1ij5_A          187 LAALVADFRKIDTNSNGTLSRKEFREHF--V-------------------RLGFDKKSVQDALFRYADEDESDDVGFSEY  245 (323)
T ss_dssp             HHTSCCCHHHHCTTCCSEECHHHHHHHH--H-------------------HTTCCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHH--c-------------------CCCCCHHHHHHHHHHHhcCCCCCEEeHHHH
Confidence            4568889999999999999999997653  1                   23334457899 999999999999999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH-HhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF-KENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l-~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++....      .++.+|+.||+|++|+||.+||+.++ ..+|.. ++++++.|+..+|.|+|
T Consensus       246 ~~~l~~~~------~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~d  304 (323)
T 1ij5_A          246 VHLGLCLL------VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDS  304 (323)
T ss_dssp             HHHHHHHH------HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTC
T ss_pred             HHHHHHHH------HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCC
Confidence            99887654      79999999999999999999999999 999887 88999999999998875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.93  E-value=3.5e-26  Score=230.40  Aligned_cols=171  Identities=18%  Similarity=0.157  Sum_probs=127.7

Q ss_pred             eeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch----hhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY----AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        28 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      ...+.||+|+||.||+|.  ..+..+|+|..........    ......+.+|+.+++.+ +||||+++..++......|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTE
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccE
Confidence            346789999999999995  4578899998755432211    12245579999999999 6999996655555667789


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|||||+|++|.+++..        +..++.|++.||.|||++||+||||||+|||+   +.  .+||+|||+|+.....
T Consensus       416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl---~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF---DK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE---SS--SEEECCCTTCEECCCH
T ss_pred             EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE---CC--eEEEEECccCEECCCc
Confidence            99999999999999865        56899999999999999999999999999999   44  9999999999987553


Q ss_pred             CC---------------CCCCChHHHHH-HHHHHHhhhhhhHHHHHH
Q 042392          184 GG---------------EASDDTSVILR-MKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       184 ~~---------------~~~~~pe~~~~-~~~~~~~~d~~s~~~~~~  214 (436)
                      ..               ....+||++.. ...|+..+|+|+..+..+
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l  529 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELM  529 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            21               11227888875 356888899999755443

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.92  E-value=6.7e-26  Score=209.01  Aligned_cols=208  Identities=16%  Similarity=0.234  Sum_probs=162.5

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH----hcCC--CCCHHHHHHH----HHHHcCCCCCcccHHHHHHHHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT----KVGS--MLTEFDVKQL----MEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~----~~~~--~~s~~~i~~l----~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ++..+...++.+|..+|.+++|.|+.+||..+++    .+|.  .++.+++..+    |..+|.|++|.|+|.||+..+.
T Consensus         5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~   84 (272)
T 2be4_A            5 FANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMIL   84 (272)
T ss_dssp             CCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHS
T ss_pred             HHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHh
Confidence            4556677899999999999999999999999999    8888  8999998765    4778999999999999999843


Q ss_pred             -----------hhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHH
Q 042392          288 -----------QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL  356 (436)
Q Consensus       288 -----------~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (436)
                                 ..........++.+|+.+|.|++|.|+..||..++..+.          ...|...... .....+..+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~----------~~~g~~~~~~-~~~~~~~~~  153 (272)
T 2be4_A           85 PQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLF----------LQHKKKIPPN-KLDEYTDAM  153 (272)
T ss_dssp             CHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHH----------HHTTCCCCHH-HHHHHHHHH
T ss_pred             hhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHH----------HhcCCCCCHH-HHHHHHHHH
Confidence                       222245567899999999999999999999976533320          1112221111 111234569


Q ss_pred             HHccccCCCCcccHHHHHHHHHhh------------hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC----C-
Q 042392          357 VLQGDIDGNGNIDFIEFVNLMTDI------------YKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM----G-  419 (436)
Q Consensus       357 ~~~~d~~~~g~i~f~EF~~~~~~~------------~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~----~-  419 (436)
                      ++.+|.|++|.|+|+||+.++...            ......+.++.+|+.||+|++|+||.+||+.++..++.    . 
T Consensus       154 ~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~  233 (272)
T 2be4_A          154 MKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSI  233 (272)
T ss_dssp             HHHHCSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSC
T ss_pred             HHHhccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999887541            11122467999999999999999999999999987654    4 


Q ss_pred             ChHHHHH----HHHhhccCCC
Q 042392          420 DDATIKE----IISEVGRDHK  436 (436)
Q Consensus       420 ~~~e~~~----~~~~~d~~~d  436 (436)
                      ++++++.    +++.+|.|+|
T Consensus       234 ~~~~~~~~~~~l~~~~D~d~d  254 (272)
T 2be4_A          234 SGGDLDKFRECLLTHCDMNKD  254 (272)
T ss_dssp             CHHHHHHHHHHHHHHHCCSTT
T ss_pred             CHHHHHHHHHHHHHHhCCCCC
Confidence            8888877    9999999876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=4.1e-25  Score=204.58  Aligned_cols=146  Identities=18%  Similarity=0.220  Sum_probs=114.2

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch-----h---------hHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-----A---------ENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~---------~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      +.+.||+|+||.||+|.+ .+|+.||||++........     .         .....+.+|+.+++.+.   | +++.+
T Consensus        94 ~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~  168 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPK  168 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCC
T ss_pred             ecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCe
Confidence            339999999999999999 8899999999865322110     0         13456889999999994   4 56666


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      ++.. +..|+||||++|++|.+ +      .......++.|++.||.|||++||+||||||+|||+   + ++.+||+||
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl~DF  236 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-V------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWIIDF  236 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-C------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEECCC
T ss_pred             EEec-cceEEEEEecCCCcHHH-c------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEEEEC
Confidence            5544 45699999999999987 3      123456799999999999999999999999999999   5 789999999


Q ss_pred             CCcccccccCCCCCCChHHHHH
Q 042392          175 GSALLFEEEGGEASDDTSVILR  196 (436)
Q Consensus       175 G~a~~~~~~~~~~~~~pe~~~~  196 (436)
                      |+|+....     ..+|+.+.+
T Consensus       237 G~a~~~~~-----~~a~e~l~r  253 (282)
T 1zar_A          237 PQSVEVGE-----EGWREILER  253 (282)
T ss_dssp             TTCEETTS-----TTHHHHHHH
T ss_pred             CCCeECCC-----CCHHHHHHH
Confidence            99986533     246776653

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.92  E-value=1.5e-24  Score=193.45  Aligned_cols=172  Identities=19%  Similarity=0.165  Sum_probs=151.2

Q ss_pred             HHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc
Q 042392          214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE  293 (436)
Q Consensus       214 ~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~  293 (436)
                      ++..+++++...++.+|..+|.+++|.|+.+|+..+++.++..++.+++..+++.+|.|++|.|+|.||+..+...    
T Consensus        41 ~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~----  116 (220)
T 3sjs_A           41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----  116 (220)
T ss_dssp             GGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----
T ss_pred             HHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999887653    


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                        ..++.+|+.+|+|++|+|+.+||..++..+                   +..++++++..+++.+| |++|.|+|+||
T Consensus       117 --~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------------------g~~~~~~~~~~l~~~~d-d~dg~I~~~eF  174 (220)
T 3sjs_A          117 --ELAYNLFVMNARARSGTLEPHEILPALQQL-------------------GFYINQRTSLLLHRLFA-RGMAFCDLNCW  174 (220)
T ss_dssp             --HHHHHHHHHHCCSSTTEECHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHC---CCSEEHHHH
T ss_pred             --HHHHHHHHHHCCCCCCCCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhc-CCCCcCcHHHH
Confidence              569999999999999999999997653322                   33445668999999999 99999999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhh-ccCCCC------cccHHHHHHHHHhCC
Q 042392          374 VNLMTDIYKLETPELLEKAFQYL-DKNSDQ------FITVNELETAFKENN  417 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~-D~d~~G------~I~~~el~~~l~~~~  417 (436)
                      +.++....      .++.+|+.+ |++++|      .|+.+|+..++.++.
T Consensus       175 ~~~~~~l~------~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~~~  219 (220)
T 3sjs_A          175 IAICAFAA------QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSLL  219 (220)
T ss_dssp             HHHHHHHH------HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHH------HHHHHHHHhcccCCCCCcccccceeHHHHHHHHHHhc
Confidence            99987654      589999999 999999      889999999987753

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.91  E-value=3.1e-24  Score=183.85  Aligned_cols=163  Identities=21%  Similarity=0.334  Sum_probs=139.2

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC-CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS  299 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~-~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~  299 (436)
                      .....++.+|..+|.+++|.|+.+|+..+++.++ .+++.+++..+++.+|.|++|.|+|.||+..+..      ...++
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~   77 (172)
T 2znd_A            4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQ   77 (172)
T ss_dssp             --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHH
T ss_pred             cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHH
Confidence            3456789999999999999999999999999988 7899999999999999999999999999987653      25699


Q ss_pred             HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       300 ~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      .+|+.+|+|++|+|+..||..++..              +     +..++++++..+++.+|.|++|.|+|+||+.++..
T Consensus        78 ~~F~~~D~d~~G~i~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           78 NVFRTYDRDNSGMIDKNELKQALSG--------------F-----GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHH--------------T-----TCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCccCHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            9999999999999999999765322              2     23345668999999999999999999999998875


Q ss_pred             hhccCCHHHHHHHHHhhccCCCCcccH--HHHHHHHH
Q 042392          380 IYKLETPELLEKAFQYLDKNSDQFITV--NELETAFK  414 (436)
Q Consensus       380 ~~~~~~~~~~~~~F~~~D~d~~G~I~~--~el~~~l~  414 (436)
                      .      +.++.+|+.+|+|++|+||.  +|+..++.
T Consensus       139 ~------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~  169 (172)
T 2znd_A          139 L------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVF  169 (172)
T ss_dssp             H------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHH
T ss_pred             H------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHH
Confidence            4      57999999999999999985  55555543

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.91  E-value=2.3e-24  Score=184.93  Aligned_cols=160  Identities=21%  Similarity=0.301  Sum_probs=140.1

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-C-------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-G-------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL  292 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-~-------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~  292 (436)
                      +++..++.+|..+| +++|.|+.+||..+++.+ |       ..++..++..+++.+|.|++|.|+|.||+..+..    
T Consensus         1 e~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----   75 (173)
T 1alv_A            1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN----   75 (173)
T ss_dssp             CHHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----
T ss_pred             CchhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH----
Confidence            35678999999999 999999999999999997 5       6789999999999999999999999999988764    


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                        ...++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+| |++|.|+|+|
T Consensus        76 --~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d-d~dg~i~~~e  133 (173)
T 1alv_A           76 --IKKWQAIYKQFDVDRSGTIGSSELPGAFEAA-------------------GFHLNEHLYSMIIRRYS-DEGGNMDFDN  133 (173)
T ss_dssp             --HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-------------------TCCCCHHHHHHHHHHHT-CSSSCBCHHH
T ss_pred             --HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhc-CCCCcCcHHH
Confidence              3579999999999999999999997653322                   23345668999999999 9999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      |+.++...      +.++.+|+.+|+|++|+||.+ +++++.
T Consensus       134 F~~~~~~~------~~~~~~F~~~D~d~~G~i~~~-~~~~l~  168 (173)
T 1alv_A          134 FISCLVRL------DAMFRAFKSLDKDGTGQIQVN-IQEWLQ  168 (173)
T ss_dssp             HHHHHHHH------HHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred             HHHHHHHH------HHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence            99988753      579999999999999999999 888875

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.91  E-value=1.7e-23  Score=182.51  Aligned_cols=161  Identities=20%  Similarity=0.260  Sum_probs=141.3

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAF  302 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F  302 (436)
                      ...++.+|..+|.+++|.|+.+||..++...+.+++.+++..+|+.+|.|++|.|+|+||+..+...      ..++.+|
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F   99 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGF   99 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHH
Confidence            4568899999999999999999999999888888999999999999999999999999999887542      5689999


Q ss_pred             HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc
Q 042392          303 QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK  382 (436)
Q Consensus       303 ~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~  382 (436)
                      +.+|+|++|+|+..||..++..              +     +..++++++..+++.+|.|++|.|+|+||+.++...  
T Consensus       100 ~~~D~d~~G~i~~~e~~~~l~~--------------~-----g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~--  158 (191)
T 1y1x_A          100 RKRDSSGDGRLDSNEVRAALLS--------------S-----GYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV--  158 (191)
T ss_dssp             HHHCTTSSSCBCHHHHHHHHHT--------------T-----SCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred             HHhCCCCCCeEcHHHHHHHHHH--------------h-----CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH--
Confidence            9999999999999999765322              2     234556789999999999999999999999988754  


Q ss_pred             cCCHHHHHHHHHhhccCCCCc--ccHHHHHHHHH
Q 042392          383 LETPELLEKAFQYLDKNSDQF--ITVNELETAFK  414 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~--I~~~el~~~l~  414 (436)
                          +.++.+|+.+|+|++|+  ++.+||..++.
T Consensus       159 ----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~  188 (191)
T 1y1x_A          159 ----CRVRNVFAFYDRERTGQVTFTFDTFIGGSV  188 (191)
T ss_dssp             ----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred             ----HHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence                47899999999999999  67999998765

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.90  E-value=3.7e-23  Score=176.24  Aligned_cols=153  Identities=16%  Similarity=0.259  Sum_probs=133.5

Q ss_pred             HHhhhhCCCCCCccCHHHHHHHHHhcCC-----CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHH
Q 042392          228 EKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAF  302 (436)
Q Consensus       228 ~~F~~~D~~~~g~i~~~eL~~~l~~~~~-----~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F  302 (436)
                      +.|..+|.+++|.|+.+|+..+++.++.     +++..++..+++.+|.|++|.|+|.||+..+...      ..++.+|
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   78 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF   78 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            4588899999999999999999999886     6899999999999999999999999999877543      5799999


Q ss_pred             HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc
Q 042392          303 QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK  382 (436)
Q Consensus       303 ~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~  382 (436)
                      +.+|+|++|+|+..||..++..+                   +..++++++..+++.+  |++|.|+|+||+.++...  
T Consensus        79 ~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~--  135 (167)
T 1gjy_A           79 ISFDSDRSGTVDPQELQKALTTM-------------------GFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL--  135 (167)
T ss_dssp             HHHCTTCCSEECHHHHHHHHHTT-------------------TCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH--
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH--
Confidence            99999999999999997653222                   3334566899999999  889999999999988764  


Q ss_pred             cCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          383 LETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                          +.++.+|+.+|+|++|+||.+ +++++.
T Consensus       136 ----~~~~~~F~~~D~d~~G~i~~~-~~~~l~  162 (167)
T 1gjy_A          136 ----RALTDSFRRRDSAQQGMVNFS-YDDFIQ  162 (167)
T ss_dssp             ----HHHHHHHHHHCTTCCSEEEEE-HHHHHH
T ss_pred             ----HHHHHHHHHhCCCCCeeEEee-HHHHHH
Confidence                479999999999999999998 888875

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.90  E-value=2.4e-23  Score=177.07  Aligned_cols=154  Identities=17%  Similarity=0.221  Sum_probs=134.3

Q ss_pred             HHhhhhCCCCCCccCHHHHHHHHHhcCC-----CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHH
Q 042392          228 EKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAF  302 (436)
Q Consensus       228 ~~F~~~D~~~~g~i~~~eL~~~l~~~~~-----~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F  302 (436)
                      ..|..+|.+++|.|+.+||..+++.++.     .++..++..+++.+|.|++|.|+|.||+..+...      ..++.+|
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   76 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF   76 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            3588899999999999999999999886     6899999999999999999999999999876543      5699999


Q ss_pred             HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc
Q 042392          303 QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK  382 (436)
Q Consensus       303 ~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~  382 (436)
                      +.+|+|++|+|+..||..++..+                   +..++++++..+++.+  |++|.|+|+||+.++...  
T Consensus        77 ~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~--  133 (165)
T 1k94_A           77 MTVDQDGSGTVEHHELRQAIGLM-------------------GYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL--  133 (165)
T ss_dssp             HHHCTTCCSBCCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH--
T ss_pred             HHhCCCCCceECHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH--
Confidence            99999999999999997653222                   2334566899999998  899999999999988764  


Q ss_pred             cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          383 LETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                          +.++.+|+.+|+|++|+||.+ |+++|..
T Consensus       134 ----~~~~~~F~~~D~d~~G~i~~~-~~~~l~~  161 (165)
T 1k94_A          134 ----RALTDFFRKRDHLQQGSANFI-YDDFLQG  161 (165)
T ss_dssp             ----HHHHHHHHTTCTTCCSEEEEE-HHHHHHH
T ss_pred             ----HHHHHHHHHhCCCCCCeEeee-HHHHHHH
Confidence                579999999999999999999 9998853

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.89  E-value=2e-23  Score=183.11  Aligned_cols=162  Identities=18%  Similarity=0.297  Sum_probs=140.4

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC-----CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL  292 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~-----~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~  292 (436)
                      .++++...++. |..+|.+.+|.|+.+||..+++.++.     .++.+++..+++.+|.|++|.|+|.||+..+...   
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~---  102 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL---  102 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence            46667788889 99999999999999999999999885     6799999999999999999999999999887543   


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                         ..++.+|+.+|+|++|+|+..||..++..+                   +..++++++.++++.+  |++|.|+|+|
T Consensus       103 ---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~l~~~~--d~dg~i~~~e  158 (198)
T 1juo_A          103 ---NGWRQHFISFDTDRSGTVDPQELQKALTTM-------------------GFRLSPQAVNSIAKRY--STNGKITFDD  158 (198)
T ss_dssp             ---HHHHHHHHTTCTTCCSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHT--CSSSSEEHHH
T ss_pred             ---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHh--CCCCeEcHHH
Confidence               579999999999999999999997653222                   2334566899999999  8999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      |+.++...      +.++.+|+.+|+|++|+||.+ +.+++.
T Consensus       159 F~~~~~~~------~~~~~~F~~~D~d~~G~is~~-~~~~l~  193 (198)
T 1juo_A          159 YIACCVKL------RALTDSFRRRDTAQQGVVNFP-YDDFIQ  193 (198)
T ss_dssp             HHHHHHHH------HHHHHHHHHTCTTCCSEEEEE-HHHHHH
T ss_pred             HHHHHHHH------HHHHHHHHHhCCCCCCeEeec-HHHHHH
Confidence            99988764      468999999999999999997 777764

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=174.27  Aligned_cols=152  Identities=18%  Similarity=0.247  Sum_probs=124.7

Q ss_pred             hCCCCCCccCHHHHHHHHHhc------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhC
Q 042392          233 MDTDKNGTLSYDELRAGLTKV------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFD  306 (436)
Q Consensus       233 ~D~~~~g~i~~~eL~~~l~~~------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D  306 (436)
                      -..+++|.|+.+||+.+++.+      +..++.+++..+++.+|.|++|.|+|+||+..+...      ..++.+|+.||
T Consensus        13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD   86 (174)
T 2i7a_A           13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ   86 (174)
T ss_dssp             CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC
T ss_pred             ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc
Confidence            357889999999999999998      568899999999999999999999999999876533      46999999999


Q ss_pred             CCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCH
Q 042392          307 KDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETP  386 (436)
Q Consensus       307 ~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~  386 (436)
                       |++|+|+..||..++..+..               ..+..++++++..+++.+| |++|.|+|+||+.++...      
T Consensus        87 -d~~G~I~~~El~~~l~~l~~---------------~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------  143 (174)
T 2i7a_A           87 -TSPGVLLSSDLWKAIENTDF---------------LRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------  143 (174)
T ss_dssp             -SBTTBEEGGGHHHHHHTCGG---------------GTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------
T ss_pred             -CCCCcCCHHHHHHHHHHhHh---------------ccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------
Confidence             99999999999765322100               0023345668999999999 999999999999988753      


Q ss_pred             HHHHHHHHhhccCCCC-cccHHHHHHHH
Q 042392          387 ELLEKAFQYLDKNSDQ-FITVNELETAF  413 (436)
Q Consensus       387 ~~~~~~F~~~D~d~~G-~I~~~el~~~l  413 (436)
                      +.++.+|+.||+|++| .++.+|+..+.
T Consensus       144 ~~~~~~F~~~D~d~~GI~~~~~Ef~~~~  171 (174)
T 2i7a_A          144 EAMAKTFRNLSKDGKGLYLTEMEWMSLV  171 (174)
T ss_dssp             HHHHHHHHHHCSSSSCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCceecHHHHHHHH
Confidence            4699999999999999 33788887654

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.9e-23  Score=178.24  Aligned_cols=146  Identities=27%  Similarity=0.421  Sum_probs=128.5

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh-hcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK-LER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~-~~~  294 (436)
                      ..++++++..++.+|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.+++|.|+|.||+..+..... ...
T Consensus         3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~   82 (176)
T 2lhi_A            3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   82 (176)
T ss_dssp             CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence            4578999999999999999999999999999999999999999999999999999999999999999988765432 335


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .+.++.+|+.||+|++|+|+..||..++..+                   +..++++++.++++.+| |+||.|+|+||+
T Consensus        83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-------------------g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~  142 (176)
T 2lhi_A           83 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-------------------GEKLTDAEVDDMLREVS-DGSGEINIQQFA  142 (176)
T ss_dssp             HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTT-------------------TCCCCHHHHHHHHHHHH-TTSSCBCTTHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------------------CcccchHHHHHHHHhhc-CCCCeEeHHHHH
Confidence            6789999999999999999999997653222                   44566778999999999 999999999999


Q ss_pred             HHHHhhh
Q 042392          375 NLMTDIY  381 (436)
Q Consensus       375 ~~~~~~~  381 (436)
                      .+|..-.
T Consensus       143 ~~m~k~~  149 (176)
T 2lhi_A          143 ALLSKGS  149 (176)
T ss_dssp             HHHTCCS
T ss_pred             HHHHhcC
Confidence            9997543

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.89  E-value=6.6e-23  Score=179.64  Aligned_cols=173  Identities=29%  Similarity=0.493  Sum_probs=142.6

Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA  269 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~  269 (436)
                      .+.++.+++.|...+.+....+..++..++++++..+..+|..+|.+.+|.|+.+||..++..++..++..++..+|+.+
T Consensus        23 ~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~  102 (197)
T 3pm8_A           23 SSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI  102 (197)
T ss_dssp             CTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            57888899999988888888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhh
Q 042392          270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA  349 (436)
Q Consensus       270 d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (436)
                      |.|++|.|+|.||+..+.........+.++.+|+.+|+|++|+|+.+||..++..+              +   .+..++
T Consensus       103 D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~--------------~---~~~~~~  165 (197)
T 3pm8_A          103 DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD--------------D---IENPLI  165 (197)
T ss_dssp             ------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC---------------------CCHHH
T ss_pred             CCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--------------c---cCCCCC
Confidence            99999999999999988777666778899999999999999999999997653221              0   033456


Q ss_pred             HHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       350 ~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      ++++.++++.+|.|++|.|+|+||+.++..
T Consensus       166 ~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          166 DKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            778999999999999999999999998864

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.88  E-value=5.8e-23  Score=171.42  Aligned_cols=144  Identities=23%  Similarity=0.453  Sum_probs=127.2

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~  295 (436)
                      .++++++..++.+|..+|.+++|.|+..||..+++.++..++..++..++..+|.+++|.|+|.||+..+.... .....
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   82 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE   82 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence            36889999999999999999999999999999999999999999999999999999999999999998876553 34456


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+.||+|++|+|+..||..++..+                   +..++..++.++++.+|.|+||.|+|+||+.
T Consensus        83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-------------------g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~  143 (148)
T 2lmt_A           83 EEMREAFKIFDRDGDGFISPAELRFVMINL-------------------GEKVTDEEIDEMIREADFDGDGMINYEEFVW  143 (148)
T ss_dssp             HHHHHHHHHHHSSCSSEECHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCCSCCSSEEHHHHHH
T ss_pred             HHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-------------------CccccHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            789999999999999999999997653322                   3445667899999999999999999999999


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      +|..
T Consensus       144 ~m~~  147 (148)
T 2lmt_A          144 MISQ  147 (148)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            8864

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.88  E-value=1.6e-22  Score=190.34  Aligned_cols=145  Identities=28%  Similarity=0.527  Sum_probs=126.2

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~  293 (436)
                      .++++++++..++++|..+|.+.+|.|+.+||..+++.++..++++++..+|+.+|.|++|.|+|+||+..+... ....
T Consensus       293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d  372 (440)
T 3u0k_A          293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD  372 (440)
T ss_dssp             CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred             HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999999999999999999999887654 3344


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ..+.++++|+.||+|++|+|+.+||..++..+                   +..+++++++++++.+|.|+||.|+|+||
T Consensus       373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-------------------Ge~LSdeEIdeLfke~D~DgDGkIsyeEF  433 (440)
T 3u0k_A          373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL-------------------GEKLTDEEVDEMIREADIDGDGQVNYEEF  433 (440)
T ss_dssp             -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred             hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            56789999999999999999999997653322                   34456778999999999999999999999


Q ss_pred             HHHHH
Q 042392          374 VNLMT  378 (436)
Q Consensus       374 ~~~~~  378 (436)
                      +.+|.
T Consensus       434 vkmMt  438 (440)
T 3u0k_A          434 VQMMT  438 (440)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            99875

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.88  E-value=2.6e-22  Score=166.36  Aligned_cols=141  Identities=24%  Similarity=0.479  Sum_probs=122.2

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSEY  297 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~~  297 (436)
                      ++++...++.+|..+|.+++|.|+.+||..+++.+|.+++..++..+++.+|.+++|.|+|.||+..+.... .......
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~   80 (143)
T 2obh_A            1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE   80 (143)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence            356788999999999999999999999999999999999999999999999999999999999998876542 2234568


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++.+|+.||+|++|+|+..||..++..+                   +..++++++.++++.+|.|++|.|+|+||+.++
T Consensus        81 l~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           81 ILKAFKLFDDDETGKISFKNLKRVAKEL-------------------GENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            9999999999999999999997653221                   344566789999999999999999999999876


Q ss_pred             H
Q 042392          378 T  378 (436)
Q Consensus       378 ~  378 (436)
                      .
T Consensus       142 ~  142 (143)
T 2obh_A          142 K  142 (143)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.88  E-value=1.4e-21  Score=170.40  Aligned_cols=173  Identities=29%  Similarity=0.476  Sum_probs=145.8

Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA  269 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~  269 (436)
                      .++++.+++.|...+.+....+..++..++++++..+..+|..+|.+++|.|+.+||..+++.++..++ .++..+|+.+
T Consensus        18 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~   96 (191)
T 3k21_A           18 GIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQI   96 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHh
Confidence            567888889999999999998999999999999999999999999999999999999999999998888 8999999999


Q ss_pred             cCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhh
Q 042392          270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA  349 (436)
Q Consensus       270 d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (436)
                      |.|++|.|+|.||+..+.... ....+.++.+|+.+|+|++|+|+..||..++..              .+....-....
T Consensus        97 D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~--------------~~~~~~l~~~~  161 (191)
T 3k21_A           97 DSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYN--------------GNKKGNITQRD  161 (191)
T ss_dssp             CTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHH--------------SSSCSCCCHHH
T ss_pred             CCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh--------------cCCCCCCCHhH
Confidence            999999999999999875544 356678999999999999999999999765321              11111001111


Q ss_pred             HHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       350 ~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      .+++.++++.+|.|+||.|+|+||+.++.
T Consensus       162 ~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          162 VNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            24688999999999999999999998764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.87  E-value=2.1e-22  Score=184.12  Aligned_cols=141  Identities=15%  Similarity=0.161  Sum_probs=108.6

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCce--EEEEEeecCCccc--------------------hhhHHHHHHHHHHHHHhcC
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMP--YACKSMAKKPKMK--------------------YAENDMMIRREIQIRRLLS   84 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~   84 (436)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++......                    .......+.+|+.+|+.+ 
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-  127 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-  127 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-
Confidence            78999999999999999998778999  9999875432110                    011234678999999999 


Q ss_pred             CCCCe--eeceeeeecCCeEEEEEeccCC-C----ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCcccccCCCC
Q 042392           85 GQPNI--VELKSAHEDETAVHVVMELCQG-G----DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH-SMGVMHRDLKPE  156 (436)
Q Consensus        85 ~h~ni--v~~~~~~~~~~~~~iv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~Hrdlkp~  156 (436)
                      .|+++  +.++..    ...++||||+.+ |    +|.+....   .++..+..++.|++.||.||| ++||+||||||+
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~  200 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY  200 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence            47754  334432    346899999942 3    66655422   335678899999999999999 999999999999


Q ss_pred             cceeeccCCCCcEEEEecCCcccc
Q 042392          157 NFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       157 Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      |||+   +.  .++|+|||+|...
T Consensus       201 NILl---~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          201 NIMY---ID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SEEE---SS--SEEECCCTTCEET
T ss_pred             HEEE---cC--cEEEEECcccccC
Confidence            9999   44  8999999999865

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.87  E-value=1.6e-21  Score=162.62  Aligned_cols=144  Identities=29%  Similarity=0.527  Sum_probs=125.4

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~  294 (436)
                      ..++++++..++.+|..+|.+++|.|+.+||..+++.++..++..++..+++.+|.+++|.|+|.||+..+... .....
T Consensus         2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   81 (148)
T 1exr_A            2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS   81 (148)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence            35678889999999999999999999999999999999999999999999999999999999999999887654 23345


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...++.+|+.+|+|++|+|+..||..++..+                   +..++++++.++++.+|.|++|.|+|+||+
T Consensus        82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~  142 (148)
T 1exr_A           82 EEELIEAFKVFDRDGNGLISAAELRHVMTNL-------------------GEKLTDDEVDEMIREADIDGDGHINYEEFV  142 (148)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHCSSSSSSBCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            5679999999999999999999997653222                   334566789999999999999999999999


Q ss_pred             HHHH
Q 042392          375 NLMT  378 (436)
Q Consensus       375 ~~~~  378 (436)
                      .++.
T Consensus       143 ~~~~  146 (148)
T 1exr_A          143 RMMV  146 (148)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            9875

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.86  E-value=4.4e-22  Score=167.88  Aligned_cols=143  Identities=18%  Similarity=0.217  Sum_probs=122.3

Q ss_pred             cCChhhHHHHHHHhhhhCC--CCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh---h
Q 042392          217 YLPGEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ---K  291 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~--~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~---~  291 (436)
                      +++++++..++.+|..+|.  +++|.|+..||..+++.+|..++++++..++. .+.+++|.|+|.||+..+....   .
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence            5789999999999999995  88999999999999999999999999998764 4677899999999999876543   3


Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc--CCCCccc
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI--DGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~g~i~  369 (436)
                      ....+.++++|+.||+|++|+|+..||+.++..+                   |.+++++++.++++.+|.  |++|.|+
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-------------------g~~ls~~e~~~l~~~~D~~~d~dG~I~  141 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKML-------------------GERITEDQCNDIFTFCDIREDIDGNIK  141 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHS-------------------SSCCCHHHHHHHHHHTTCCCCSSCCEE
T ss_pred             cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCcCCCCCCeEe
Confidence            4456789999999999999999999997663322                   455677899999999985  8899999


Q ss_pred             HHHHHHHHHh
Q 042392          370 FIEFVNLMTD  379 (436)
Q Consensus       370 f~EF~~~~~~  379 (436)
                      |+||+.+|..
T Consensus       142 ~~EF~~~m~~  151 (159)
T 3i5g_C          142 YEDLMKKVMA  151 (159)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHC
Confidence            9999998764

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.85  E-value=2.6e-21  Score=162.05  Aligned_cols=139  Identities=17%  Similarity=0.360  Sum_probs=120.9

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~  295 (436)
                      .++++++..++.+|..+|.+++|.|+..||..+++.+|..++..++..++.    ++++.|+|.||+..+.... .....
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~   84 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPE   84 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhcccccH
Confidence            478999999999999999999999999999999999999999999887765    4578899999999876553 33456


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+.||+|++|+|+..||+.++..+                   |.+++++++.++++.+|.| ||.|+|+||+.
T Consensus        85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-------------------g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~  144 (153)
T 3i5g_B           85 DALRNAFSMFDEDGQGFIPEDYLKDLLENM-------------------GDNFSKEEIKNVWKDAPLK-NKQFNYNKMVD  144 (153)
T ss_dssp             HHHHHHHHTTCSSCSSCCCHHHHHHHHHSS-------------------SSCCCHHHHHHHHTTCCEE-TTEECHHHHHH
T ss_pred             HHHHHHHhccccCCCCeEeHHHHHHHHHHc-------------------CCcCCHHHHHHHHHHhCCC-cCEEcHHHHHH
Confidence            789999999999999999999997663222                   5566778999999999988 99999999999


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      +|..
T Consensus       145 ~m~~  148 (153)
T 3i5g_B          145 IKGK  148 (153)
T ss_dssp             HHHC
T ss_pred             HhcC
Confidence            9875

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.85  E-value=2.1e-21  Score=169.04  Aligned_cols=171  Identities=30%  Similarity=0.420  Sum_probs=147.3

Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----------CCCC
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----------GSML  257 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----------~~~~  257 (436)
                      .+.++.+++.|...+.+....+..++..+ ++++...+..+|..+|.+++|.|+.+|+..++..+           +..+
T Consensus         5 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~   84 (191)
T 3khe_A            5 LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQ   84 (191)
T ss_dssp             HHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchh
Confidence            46777888888888888888888888887 89999999999999999999999999999999987           6667


Q ss_pred             CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhh
Q 042392          258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAK  337 (436)
Q Consensus       258 s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~  337 (436)
                      +..++..+|+.+|.|++|.|+|.||+..+.........+.++.+|+.+|.|++|+|+..||..++.              
T Consensus        85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--------------  150 (191)
T 3khe_A           85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--------------  150 (191)
T ss_dssp             HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--------------
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--------------
Confidence            888999999999999999999999999887666666778899999999999999999999965421              


Q ss_pred             hcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                             +..++++++..+++.+|.|++|.|+|+||+.++....
T Consensus       151 -------~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  187 (191)
T 3khe_A          151 -------VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC  187 (191)
T ss_dssp             -------SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             -------cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence                   2234566789999999999999999999999887654

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.85  E-value=2.1e-21  Score=160.90  Aligned_cols=124  Identities=26%  Similarity=0.429  Sum_probs=105.4

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ...+++++|+.||+|++|.|+..||..++.              .+|     ..+++.++..+++.+|.|++|.|+|+||
T Consensus         4 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~--------------~~g-----~~~~~~~~~~~~~~~d~~~~g~i~~~eF   64 (143)
T 2obh_A            4 QKQEIREAFDLFDADGTGTIDVKELKVAMR--------------ALG-----FEPKKEEIKKMISEIDKEGTGKMNFGDF   64 (143)
T ss_dssp             HHHHHHHHHHTTCTTCCSEEEGGGHHHHHH--------------HTT-----CCCCHHHHHHHHHHHTTTCCSEEEHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHH--------------HcC-----CCCCHHHHHHHHHHhCCCCCCeeeHHHH
Confidence            456799999999999999999999976532              223     3345668999999999999999999999


Q ss_pred             HHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++...... ...+.++.+|+.||+|++|+|+.+||++++..+|.. +++++++|++++|.|+|
T Consensus        65 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~d  129 (143)
T 2obh_A           65 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD  129 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            9987654321 224679999999999999999999999999999988 99999999999999876

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.85  E-value=1.2e-20  Score=159.27  Aligned_cols=146  Identities=27%  Similarity=0.455  Sum_probs=124.8

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCC-CCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh---
Q 042392          215 VEYLPGEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ---  290 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~---  290 (436)
                      +..+++++...+..+|..+|.++ +|.|+.+|+..+++.++..++..++..+|+.+|.|++|.|+|.||+..+....   
T Consensus         9 ~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~   88 (161)
T 1dtl_A            9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   88 (161)
T ss_dssp             GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             HhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhccc
Confidence            34568899999999999999999 99999999999999999999999999999999999999999999999877654   


Q ss_pred             -hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          291 -KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       291 -~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                       .......++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+
T Consensus        89 ~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~-------------------g~~~~~~~~~~~~~~~D~d~dg~i~  149 (161)
T 1dtl_A           89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------GETITEDDIEELMKDGDKNNDGRID  149 (161)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---------------------CCCHHHHHHHHHHHCTTSSSEEE
T ss_pred             ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEe
Confidence             34456779999999999999999999997763322                   3345666889999999999999999


Q ss_pred             HHHHHHHHHh
Q 042392          370 FIEFVNLMTD  379 (436)
Q Consensus       370 f~EF~~~~~~  379 (436)
                      |+||+.++..
T Consensus       150 ~~eF~~~~~~  159 (161)
T 1dtl_A          150 YDEFLEFMKG  159 (161)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHc
Confidence            9999988754

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.85  E-value=2.6e-21  Score=166.03  Aligned_cols=125  Identities=29%  Similarity=0.425  Sum_probs=107.9

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++.++++++|+.||+|++|+|+..||..++..+                   +..+++.++.+++..+|.|++|.|+|+
T Consensus         7 ~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~l-------------------g~~~~~~~~~~~~~~~d~d~~~~i~~~   67 (176)
T 2lhi_A            7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-------------------GLSPSEAEVNDLMNEIDVDGNHQIEFS   67 (176)
T ss_dssp             TTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHH-------------------TCCCCHHHHHHHHTTTCSSCSSSBCTT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-------------------CCChhHHHHHHHHHHhCcCCCccchHH
Confidence            4556789999999999999999999997664333                   445566789999999999999999999


Q ss_pred             HHHHHHHhhhccC-CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKLE-TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++....... ..++++.||+.||+|++|+|+.+||+++|..+|.+ +++|+++||+++| |+|
T Consensus        68 ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~d  133 (176)
T 2lhi_A           68 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGS  133 (176)
T ss_dssp             HHHHHHTSSCCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTS
T ss_pred             HHHHHHHHhcccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCC
Confidence            9999887654433 34679999999999999999999999999999988 9999999999998 775

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.84  E-value=1.2e-20  Score=160.36  Aligned_cols=160  Identities=43%  Similarity=0.696  Sum_probs=131.7

Q ss_pred             HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCccc
Q 042392          199 QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAID  278 (436)
Q Consensus       199 ~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~  278 (436)
                      .|...+.+....+..++..++++++..+..+|..+|.+++|.|+.+|+..++..++..++..++..+|+.+|.+++|.|+
T Consensus         2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~   81 (166)
T 2aao_A            2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID   81 (166)
T ss_dssp             ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred             chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence            35556666777777888889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHH
Q 042392          279 YTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVL  358 (436)
Q Consensus       279 ~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (436)
                      |.||+..+...........++.+|+.+|.|++|.|+..||..++..+              |       .+++++..+++
T Consensus        82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~--------------~-------~~~~~~~~~~~  140 (166)
T 2aao_A           82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF--------------G-------VEDVRIEELMR  140 (166)
T ss_dssp             HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-----------------------------CCHHH
T ss_pred             HHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc--------------C-------CCHHHHHHHHH
Confidence            99999988665544556789999999999999999999997653322              2       23456888999


Q ss_pred             ccccCCCCcccHHHHHHHHHh
Q 042392          359 QGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       359 ~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      .+|.|++|.|+|+||+.++..
T Consensus       141 ~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A          141 DVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             HHCTTCSSSBCHHHHHHHHC-
T ss_pred             HhCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999988754

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.84  E-value=6e-21  Score=159.56  Aligned_cols=145  Identities=26%  Similarity=0.458  Sum_probs=122.8

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc--
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE--  293 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~--  293 (436)
                      ..++++++..+..+|..+|.+++|.|+.+|+..++..++..++..++..+++.+|.+++|.|+|.||+..+.......  
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   82 (153)
T 3ox6_A            3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA   82 (153)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc
Confidence            457889999999999999999999999999999999999999999999999999999999999999999876543322  


Q ss_pred             ---cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          294 ---RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       294 ---~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                         ....++.+|+.+|+|++|+|+..||..++...             .     +..++++++..+++.+|.|++|.|+|
T Consensus        83 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------------~-----~~~~~~~~~~~~~~~~d~~~dg~i~~  144 (153)
T 3ox6_A           83 DMIGVKELRDAFREFDTNGDGEISTSELREAMRAL-------------L-----GHQVGHRDIEEIIRDVDLNGDGRVDF  144 (153)
T ss_dssp             HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------------H-----SSCCCHHHHHHHHHHHCSSSSSSBCH
T ss_pred             ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------------h-----cCCCCHHHHHHHHHHhCCCCCCeEeH
Confidence               25678999999999999999999997653321             1     23345567889999999999999999


Q ss_pred             HHHHHHHH
Q 042392          371 IEFVNLMT  378 (436)
Q Consensus       371 ~EF~~~~~  378 (436)
                      +||+.++.
T Consensus       145 ~eF~~~~~  152 (153)
T 3ox6_A          145 EEFVRMMS  152 (153)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHHh
Confidence            99988764

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.84  E-value=3.8e-21  Score=160.29  Aligned_cols=126  Identities=27%  Similarity=0.405  Sum_probs=108.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++.++++++|+.||+|++|.|+..||..++..+                   +..+++.++..++..+|.+++|.|+|.
T Consensus         6 ~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~-------------------~~~~~~~~~~~~~~~~d~~~~g~i~~~   66 (148)
T 2lmt_A            6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTL-------------------GQNPTEAELQDLIAEAENNNNGQLNFT   66 (148)
T ss_dssp             SHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHH-------------------TCCCCHHHHHHHHHHHHTTSTTEEEHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhc-------------------CCCchHHHHHHHHHhcccCCCCcccHH
Confidence            3456789999999999999999999997653332                   334556689999999999999999999


Q ss_pred             HHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++..... ....++++.||+.||+|++|+|+.+||+.+|..+|.+ +++++++|++.+|.|+|
T Consensus        67 ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~d  133 (148)
T 2lmt_A           67 EFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGD  133 (148)
T ss_dssp             HHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCC
T ss_pred             HHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCC
Confidence            99998876544 3446789999999999999999999999999999988 99999999999999986

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.84  E-value=5.7e-21  Score=197.88  Aligned_cols=166  Identities=20%  Similarity=0.234  Sum_probs=146.4

Q ss_pred             CChhh-HHHHHHHhhhhCCCCCCccCHHHHHHHHHhc--------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          218 LPGEE-TQALKEKFIEMDTDKNGTLSYDELRAGLTKV--------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       218 l~~e~-~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~--------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +++++ ...++.+|..+| +.+|.|+.+||..+++.+        +..++.+++..+++.+|.|++|.|+|+||+..+..
T Consensus       525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~  603 (714)
T 3bow_A          525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK  603 (714)
T ss_dssp             CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            56677 889999999999 999999999999999997        77899999999999999999999999999988764


Q ss_pred             hhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcc
Q 042392          289 RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI  368 (436)
Q Consensus       289 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i  368 (436)
                      .      +.++.+|+.||+|++|+|+..||..++..+                   +..++++++..++..+| |++|.|
T Consensus       604 ~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~-------------------G~~ls~~~~~~l~~~~D-d~dG~I  657 (714)
T 3bow_A          604 I------QKYQKIYREIDVDRSGTMNSYEMRKALEEA-------------------GFKLPCQLHQVIVARFA-DDELII  657 (714)
T ss_dssp             H------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHT-------------------TEECCHHHHHHHHHHHS-CTTCEE
T ss_pred             H------HHHHHHHHHhCCCCCCeECHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhC-CCCCeE
Confidence            3      579999999999999999999997653222                   33455678999999999 999999


Q ss_pred             cHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          369 DFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       369 ~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      +|+||+.++...      +.++.+|+.||+|++|+|+.+|++.++..+
T Consensus       658 sf~EF~~~l~~~------~~l~~~F~~~D~d~dG~Is~~el~~l~~~~  699 (714)
T 3bow_A          658 DFDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSV  699 (714)
T ss_dssp             CHHHHHHHHHHH------HHHHHHHSSSCSSCCSEEEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHH------HHHHHHHHHhCCCCCCcEEHHHHHHHHHHH
Confidence            999999988753      478999999999999999999999887654

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.84  E-value=2.4e-20  Score=157.43  Aligned_cols=144  Identities=24%  Similarity=0.438  Sum_probs=125.3

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~  294 (436)
                      ..+++++...+..+|..+|.+++|.|+.+||..+++.++..++..++..+++.+|.+++|.|+|.||+..+... .....
T Consensus        15 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   94 (161)
T 3fwb_A           15 SELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDP   94 (161)
T ss_dssp             TTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCc
Confidence            34688999999999999999999999999999999999999999999999999999999999999999988754 33345


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+
T Consensus        95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~  155 (161)
T 3fwb_A           95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKEL-------------------GETLTDEELRAMIEEFDLDGDGEINENEFI  155 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHTTCSSSSSSEEHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            6789999999999999999999997653322                   334556689999999999999999999999


Q ss_pred             HHHH
Q 042392          375 NLMT  378 (436)
Q Consensus       375 ~~~~  378 (436)
                      .++.
T Consensus       156 ~~~~  159 (161)
T 3fwb_A          156 AICT  159 (161)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8875

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.84  E-value=1.6e-20  Score=155.84  Aligned_cols=144  Identities=27%  Similarity=0.425  Sum_probs=121.8

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      +..+++++...+..+|..+|.+++|.|+.+|+..++..++..++..++..+++.+|.+++|.|+|.||+..+.... ...
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   81 (147)
T 4ds7_A            2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND   81 (147)
T ss_dssp             --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred             CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999876542 234


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....+..+|+.+|+|++|.|+.+||..++..+                   +..++++++..+++.+| |++|.|+|+||
T Consensus        82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------------------~~~~~~~~~~~~~~~~d-~~dg~i~~~eF  141 (147)
T 4ds7_A           82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSI-------------------GEKLTDAEVDEMLREVS-DGSGEINIKQF  141 (147)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHS-SSCSSEEHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhc-CCCCcCcHHHH
Confidence            45678999999999999999999987653222                   33445667888999999 99999999999


Q ss_pred             HHHHH
Q 042392          374 VNLMT  378 (436)
Q Consensus       374 ~~~~~  378 (436)
                      +.++.
T Consensus       142 ~~~l~  146 (147)
T 4ds7_A          142 AALLS  146 (147)
T ss_dssp             HHHTT
T ss_pred             HHHHh
Confidence            88764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.84  E-value=1.8e-20  Score=161.66  Aligned_cols=166  Identities=27%  Similarity=0.478  Sum_probs=140.0

Q ss_pred             ChHHHHHHHHHHHhhhhhhHHHHHHHhcCC--hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHH
Q 042392          190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLP--GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLME  267 (436)
Q Consensus       190 ~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~--~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~  267 (436)
                      .+.++.+++.|...+.+....+..++..++  +++...+..+|..+|.+++|.|+.+||..+++.++.  +..++..+|+
T Consensus         3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~   80 (180)
T 3mse_B            3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQ   80 (180)
T ss_dssp             CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHH
Confidence            367788889999999999988888888887  889999999999999999999999999999999985  4688999999


Q ss_pred             HHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhh
Q 042392          268 AADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF  347 (436)
Q Consensus       268 ~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (436)
                      .+|.|++|.|+|.||+..+...... ..+.++.+|+.+|+|++|+|+..||..++.                     +..
T Consensus        81 ~~D~d~~g~i~~~Ef~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~I~~~El~~~l~---------------------~~~  138 (180)
T 3mse_B           81 ALDINDRGNITYTEFMAGCYRWKNI-ESTFLKAAFNKIDKDEDGYISKSDIVSLVH---------------------DKV  138 (180)
T ss_dssp             HHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTT---------------------TSS
T ss_pred             HhCCCCCCcCcHHHHHHHHHhcccC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHc---------------------CCC
Confidence            9999999999999999887654332 236799999999999999999999976521                     123


Q ss_pred             hhHHHHHHHHHccccCCC--------CcccHHHHHHHHHh
Q 042392          348 RAMNMLKKLVLQGDIDGN--------GNIDFIEFVNLMTD  379 (436)
Q Consensus       348 ~~~~~~~~~~~~~d~~~~--------g~i~f~EF~~~~~~  379 (436)
                      ++++++.++++.+|.|++        |.|+|+||+.++..
T Consensus       139 ~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          139 LDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             CCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            456689999999999888        99999999988753

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.84  E-value=1.3e-20  Score=162.11  Aligned_cols=148  Identities=28%  Similarity=0.508  Sum_probs=122.5

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      +..++++++..++.+|..+|.+++|.|+.+|+..+++.++..++..++..+|+.+|.|++|.|+|.||+..+.... ...
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            3457888999999999999999999999999999999999999999999999999999999999999998876542 234


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~-------------------g~~~~~~~~~~~~~~~D~~~dg~i~~~eF  142 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL-------------------GEKLTDEEVDEMIREADIDGDGQVNYEEF  142 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC---------------------CCCHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHcCCCCCCcCcHHHH
Confidence            45678999999999999999999997653221                   33445668999999999999999999999


Q ss_pred             HHHHHhhh
Q 042392          374 VNLMTDIY  381 (436)
Q Consensus       374 ~~~~~~~~  381 (436)
                      +.++....
T Consensus       143 ~~~~~~~~  150 (179)
T 2f2o_A          143 VQMMTAKG  150 (179)
T ss_dssp             HHHSCC--
T ss_pred             HHHHHHcC
Confidence            99887544

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.84  E-value=2.5e-20  Score=158.74  Aligned_cols=144  Identities=27%  Similarity=0.463  Sum_probs=121.8

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~  295 (436)
                      .+++++...+..+|..+|.+++|.|+.+||..+++.++..++..++..+|+.+|.|++|.|+|.||+..+.... .....
T Consensus        21 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~  100 (169)
T 3qrx_A           21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSR  100 (169)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcH
Confidence            46888999999999999999999999999999999999999999999999999999999999999999876543 23345


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..+..+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+.
T Consensus       101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~  161 (169)
T 3qrx_A          101 EEILKAFRLFDDDNSGTITIKDLRRVAKEL-------------------GENLTEEELQEMIAEADRNDDNEIDEDEFIR  161 (169)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHCCSSSSCBCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCCEeHHHHHH
Confidence            678899999999999999999987653222                   3344566788889999999999999999988


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      ++..
T Consensus       162 ~~~~  165 (169)
T 3qrx_A          162 IMKK  165 (169)
T ss_dssp             HHC-
T ss_pred             HHHh
Confidence            7754

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.84  E-value=9.3e-21  Score=156.54  Aligned_cols=139  Identities=22%  Similarity=0.401  Sum_probs=121.0

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSEY  297 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~~  297 (436)
                      +++++..++.+|..+|.+++|.|+.+|+..+++.++..++..++..+++.+|.+++|.|+|.||+..+... ........
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~   80 (142)
T 2bl0_C            1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI   80 (142)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH
Confidence            35778899999999999999999999999999999999999999999999999999999999999988753 33456778


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++.+|+.+|+|++|.|+..||..++..              +     +..++++++..+++.+| |++|.|+|+||+.++
T Consensus        81 ~~~~F~~~D~d~~G~i~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C           81 LRQAFRTFDPEGTGYIPKAALQDALLN--------------L-----GDRLKPHEFAEFLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             HHHHHHHTCCSSCSCEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence            999999999999999999999765322              1     23345668999999999 999999999998765

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.83  E-value=6.6e-21  Score=179.36  Aligned_cols=126  Identities=27%  Similarity=0.417  Sum_probs=107.4

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++.++++++|+.||+|++|+|+.+||..++..              +     +..++++++.++++.+|.|++|.|+|+
T Consensus       298 ~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrs--------------L-----G~~~TeeEI~~Lf~~~D~DgDG~IdFe  358 (440)
T 3u0k_A          298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS--------------L-----GQNPTEAELQDMINEVDADGDGTIDFP  358 (440)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------T-----TCCCCHHHHHHHHHHHCSSCSSSEEHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            456778999999999999999999999766333              2     334566789999999999999999999


Q ss_pred             HHHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++...... ...++++.||+.||+|++|+|+.+||+++|..+|.. +++|+++||+++|.|+|
T Consensus       359 EFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgD  425 (440)
T 3u0k_A          359 EFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD  425 (440)
T ss_dssp             HHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            999988765432 345789999999999999999999999999999988 99999999999999876

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.83  E-value=5.8e-21  Score=160.96  Aligned_cols=122  Identities=12%  Similarity=0.159  Sum_probs=102.6

Q ss_pred             hccHHHHHHHHHHhCC--CCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          292 LERSEYLSKAFQYFDK--DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      .++.++++++|..||.  |++|+|+..||..++++              +|     ..+++.++.+++. .|.+++|.|+
T Consensus         5 ~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~--------------lG-----~~~t~~el~~~~~-~d~~~~g~i~   64 (159)
T 3i5g_C            5 KDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRC--------------LG-----MNPTEAQVHQHGG-TKKMGEKAYK   64 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHH--------------TT-----CCCCHHHHHTTTC-CSSTTSCEEC
T ss_pred             HHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHH--------------cC-----CCCCHHHHHHHHc-ccccCCCccc
Confidence            3456789999999995  89999999999776433              33     4456668888764 5788899999


Q ss_pred             HHHHHHHHHhhhc---cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhcc
Q 042392          370 FIEFVNLMTDIYK---LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGR  433 (436)
Q Consensus       370 f~EF~~~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~  433 (436)
                      |+||+.++.....   ....++++.||+.||+|++|+|+.+||+++|..+|.+ +++|+++|++.+|.
T Consensus        65 f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~  132 (159)
T 3i5g_C           65 LEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDI  132 (159)
T ss_dssp             HHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCc
Confidence            9999998876543   2346789999999999999999999999999999999 99999999999985

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.83  E-value=2.2e-20  Score=162.80  Aligned_cols=173  Identities=22%  Similarity=0.315  Sum_probs=133.1

Q ss_pred             CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhh-hccHHHHHHHHHHhCCCCCCchh
Q 042392          237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDE  314 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~~~~G~i~  314 (436)
                      ..+.++..++..+....  .++.+++..+|+.+|.+ ++|.|++.||...+..... ......+..+|+.+|.|++|.|+
T Consensus         4 ~~s~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~   81 (193)
T 1bjf_A            4 QNSKLRPEVMQDLLEST--DFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTID   81 (193)
T ss_dssp             -CCCCCHHHHHHHHHHS--SCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEE
T ss_pred             ccccCCHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCc
Confidence            34578888888866554  47899999999999998 8999999999988765422 33456789999999999999999


Q ss_pred             hhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc------c-----
Q 042392          315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK------L-----  383 (436)
Q Consensus       315 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~------~-----  383 (436)
                      +.||..++..+                   +...++..+..+|+.+|.|++|.|+++||..++.....      .     
T Consensus        82 ~~Ef~~~~~~~-------------------~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~  142 (193)
T 1bjf_A           82 FREFIIALSVT-------------------SRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE  142 (193)
T ss_dssp             HHHHHHHHHHH-------------------TSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred             HHHHHHHHHHH-------------------cCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence            99997653222                   12234567899999999999999999999998865421      0     


Q ss_pred             -CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          384 -ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       384 -~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                       ...+.++.+|+.+|+|+||+|+.+||..++..     ++++.+++ .+|.|+|
T Consensus       143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~-~~D~~~d  190 (193)
T 1bjf_A          143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS-----DPSIVRLL-QCDPSSA  190 (193)
T ss_dssp             SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH-----CTHHHHTT-CC-----
T ss_pred             ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc-----CHHHHHHh-ccCCCCC
Confidence             11345999999999999999999999999973     55788999 9998875

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.83  E-value=1.3e-20  Score=158.74  Aligned_cols=144  Identities=26%  Similarity=0.425  Sum_probs=124.5

Q ss_pred             cCChhhHHHHHHHhhhhC-CCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh---
Q 042392          217 YLPGEETQALKEKFIEMD-TDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL---  292 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D-~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~---  292 (436)
                      .++++++..++.+|..+| .+++|.|+.+|+..+++.++..++..++..+|+.+|.+++|.|+|.||+..+......   
T Consensus         6 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~   85 (158)
T 2jnf_A            6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVN   85 (158)
T ss_dssp             TSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCC
T ss_pred             hCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccc
Confidence            467889999999999999 9999999999999999999999999999999999999999999999999988654322   


Q ss_pred             --ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 --ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 --~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                        .....++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|
T Consensus        86 ~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~D~d~dg~i~~  146 (158)
T 2jnf_A           86 PEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-------------------DETLSSEDLDAMIDEIDADGSGTVDF  146 (158)
T ss_dssp             TTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH-------------------CTTCCHHHHHHHHHHHCSSCCSEECS
T ss_pred             hhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-------------------CCcCCHHHHHHHHHHhCCCCCCcEeH
Confidence              445679999999999999999999997653322                   33445668999999999999999999


Q ss_pred             HHHHHHHHh
Q 042392          371 IEFVNLMTD  379 (436)
Q Consensus       371 ~EF~~~~~~  379 (436)
                      +||+.++..
T Consensus       147 ~eF~~~~~~  155 (158)
T 2jnf_A          147 EEFMGVMTG  155 (158)
T ss_dssp             HHHHHHTSS
T ss_pred             HHHHHHHhc
Confidence            999988753

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.83  E-value=2.9e-20  Score=164.03  Aligned_cols=175  Identities=22%  Similarity=0.251  Sum_probs=141.4

Q ss_pred             hhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhhh-ccHHHHHHHHHHhCCCC
Q 042392          232 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQKL-ERSEYLSKAFQYFDKDN  309 (436)
Q Consensus       232 ~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~~-~~~~~l~~~F~~~D~~~  309 (436)
                      .++.+++|.++.+++..+++.++  ++.+++..+|+.+|.+ ++|.|++.||...+...... .....+..+|+.+|.|+
T Consensus         7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~   84 (207)
T 2d8n_A            7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL   84 (207)
T ss_dssp             -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred             hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence            47889999999999999999887  6999999999999999 79999999999988755332 55678999999999999


Q ss_pred             CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh----h----
Q 042392          310 SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI----Y----  381 (436)
Q Consensus       310 ~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~----~----  381 (436)
                      +|.|++.||..++..+              +.     ..+++++..+|+.+|.|++|.|+++||..++...    .    
T Consensus        85 ~G~i~~~Ef~~~~~~~--------------~~-----~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~  145 (207)
T 2d8n_A           85 DGTLDFKEYVIALHMT--------------TA-----GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDV  145 (207)
T ss_dssp             CSEEEHHHHHHHHHHH--------------SC-----SSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHH
T ss_pred             CCeEeHHHHHHHHHHH--------------cC-----CCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccC
Confidence            9999999997653222              11     1223468999999999999999999999988764    1    


Q ss_pred             ccC------CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhc
Q 042392          382 KLE------TPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVG  432 (436)
Q Consensus       382 ~~~------~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d  432 (436)
                      ...      ..+.+..+|+.+|+|+||.|+++||..++..     ..++.+++...|
T Consensus       146 ~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~~~~~  197 (207)
T 2d8n_A          146 KLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA-----NKEILRLIQFEP  197 (207)
T ss_dssp             HTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH-----CHHHHHHHSCCC
T ss_pred             CCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh-----ChHHHHHHhhhh
Confidence            111      1356999999999999999999999999974     234556665544

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.82  E-value=5.4e-20  Score=155.44  Aligned_cols=147  Identities=27%  Similarity=0.458  Sum_probs=117.9

Q ss_pred             HHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh-
Q 042392          214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL-  292 (436)
Q Consensus       214 ~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~-  292 (436)
                      ++..++++++..+..+|..+|.+++|.|+..|+..++..++..++..++..+|+.+|.+++|.|+|.||+..+...... 
T Consensus        10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence            4456899999999999999999999999999999999999999999999999999999999999999999887654321 


Q ss_pred             c---cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          293 E---RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       293 ~---~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      .   ....++.+|+.+|.|++|.|+..||..++..+                   +..++++++..+++.+|.|++|.|+
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-------------------g~~~~~~~~~~~~~~~d~~~dg~i~  150 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-------------------GEHVTEEDIEDLMKDSDKNNDGRID  150 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-------------------TCCCCHHHHHHHHHHHCTTCSSSBC
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcCc
Confidence            1   45567888888888888888888876542221                   2234455677777777888888888


Q ss_pred             HHHHHHHHHh
Q 042392          370 FIEFVNLMTD  379 (436)
Q Consensus       370 f~EF~~~~~~  379 (436)
                      |+||+.++..
T Consensus       151 ~~eF~~~~~~  160 (162)
T 1top_A          151 FDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHhh
Confidence            8888776653

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.82  E-value=4.8e-21  Score=159.47  Aligned_cols=137  Identities=22%  Similarity=0.306  Sum_probs=114.6

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhh------hhhccH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQR------QKLERS  295 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~------~~~~~~  295 (436)
                      +..++.+|..+|.+++|.|+..||..+++.++..++..++..+++.+ |.+++|.|+|.||+..+...      ......
T Consensus         3 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   82 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT   82 (148)
T ss_dssp             CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccH
Confidence            34567889999999999999999999999999999999999999999 99999999999999988765      344566


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+.
T Consensus        83 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~  143 (148)
T 1m45_A           83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGL-------------------GEKLTDAEVDELLKGVEVDSNGEIDYKKFIE  143 (148)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-------------------TTCCCHHHHHHHHTTCCCCTTSEEEHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            789999999999999999999987653222                   3345566899999999999999999999998


Q ss_pred             HHH
Q 042392          376 LMT  378 (436)
Q Consensus       376 ~~~  378 (436)
                      ++.
T Consensus       144 ~~~  146 (148)
T 1m45_A          144 DVL  146 (148)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            775

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.82  E-value=2e-20  Score=157.25  Aligned_cols=144  Identities=17%  Similarity=0.193  Sum_probs=122.7

Q ss_pred             cCChhhHHHHHHHhhhhCC--CCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh--h
Q 042392          217 YLPGEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK--L  292 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~--~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~--~  292 (436)
                      .++++++..++.+|..+|.  +++|.|+.+||..+++.++..++..++..+ +.+|.+++|.|+|.||+..+.....  .
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~   80 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ   80 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence            3678899999999999999  999999999999999999999999999999 9999999999999999998876543  4


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc--cccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ--GDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~g~i~f  370 (436)
                      .....++.+|+.+|+|++|+|+..||..++..              +     +..++++++..+++.  +|.|++|.|+|
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~~~D~d~dg~i~~  141 (156)
T 1wdc_C           81 GTFADYMEAFKTFDREGQGFISGAELRHVLTA--------------L-----GERLSDEDVDEIIKLTDLQEDLEGNVKY  141 (156)
T ss_dssp             CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHHHHTCCCCTTSEEEH
T ss_pred             ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHhCCCCCCCCcEeH
Confidence            56678999999999999999999998765322              2     234456678899998  89999999999


Q ss_pred             HHHHHHHHhh
Q 042392          371 IEFVNLMTDI  380 (436)
Q Consensus       371 ~EF~~~~~~~  380 (436)
                      +||+.++...
T Consensus       142 ~eF~~~~~~~  151 (156)
T 1wdc_C          142 EDFVKKVMAG  151 (156)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999887653

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.82  E-value=1.6e-19  Score=150.24  Aligned_cols=140  Identities=17%  Similarity=0.284  Sum_probs=120.8

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHH---cCCCCCcccHHHHHHHHHhh---hh
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA---DMDGNGAIDYTEFTAATIQR---QK  291 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~---d~d~~g~i~~~EF~~~~~~~---~~  291 (436)
                      ++++++..++.+|..+|.+++|.|+..|+..+++.++..++..++..+++.+   |.++ |.|+|.||+..+...   ..
T Consensus         2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~   80 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD   80 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence            4678899999999999999999999999999999999999999999999999   9999 999999999987654   23


Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++. |.|++|.|+|+
T Consensus        81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~-d~~~dg~i~~~  140 (149)
T 2mys_C           81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-------------------GEKMTEEEVEELMKG-QEDSNGCINYE  140 (149)
T ss_pred             cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh-------------------CCCCCHHHHHHHHhh-CCCCCCcEeHH
Confidence            3456778999999999999999999997653222                   334566789999999 99999999999


Q ss_pred             HHHHHHH
Q 042392          372 EFVNLMT  378 (436)
Q Consensus       372 EF~~~~~  378 (436)
                      ||+.++.
T Consensus       141 eF~~~~~  147 (149)
T 2mys_C          141 AFVKHIM  147 (149)
T ss_pred             HHHHHHh
Confidence            9998775

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.81  E-value=2.5e-19  Score=155.77  Aligned_cols=170  Identities=23%  Similarity=0.304  Sum_probs=136.7

Q ss_pred             CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchh
Q 042392          237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDE  314 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~  314 (436)
                      ..|.++.+++..+.+.++  ++.+++..+|+.+|.+ ++|.|++.||...+.... .......+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~   81 (190)
T 2l2e_A            4 SQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYID   81 (190)
T ss_dssp             SSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEE
T ss_pred             ccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEe
Confidence            567899999999888865  6889999999999999 899999999999876542 224556799999999999999999


Q ss_pred             hhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh------------c
Q 042392          315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY------------K  382 (436)
Q Consensus       315 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~------------~  382 (436)
                      +.||..++..+                   +...+++++..+|+.+|.|++|.|+++||..++....            .
T Consensus        82 ~~ef~~~~~~~-------------------~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~  142 (190)
T 2l2e_A           82 FKEFICALSVT-------------------SRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDE  142 (190)
T ss_dssp             HHHHHHHHTTS-------------------SCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             HHHHHHHHHHH-------------------cCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence            99997653221                   2223456799999999999999999999999887631            1


Q ss_pred             cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhc
Q 042392          383 LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVG  432 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d  432 (436)
                      ....+.++.+|+.+|+|+||.|+.+||..++...     ..+..++...|
T Consensus       143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-----~~~~~~l~~~d  187 (190)
T 2l2e_A          143 DTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD-----PTIVSALSLYD  187 (190)
T ss_dssp             CCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC-----THHHHHHHTTC
T ss_pred             ccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC-----cHHHHHHHHHh
Confidence            2456789999999999999999999999999753     23445555444

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.81  E-value=1.7e-20  Score=200.27  Aligned_cols=195  Identities=21%  Similarity=0.281  Sum_probs=139.1

Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHH
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQ  303 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~  303 (436)
                      ..+..+|..+|.+.+|.|+.+||..++..++..++.+++..+++.+| |++|.|+|+||+..+...      ..+..+|+
T Consensus       607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~  679 (900)
T 1qxp_A          607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFK  679 (900)
T ss_dssp             HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHH
T ss_pred             HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence            67899999999999999999999999999999999999999999999 999999999999887643      46888999


Q ss_pred             HhCCCCCCchhh--hhhhcC----------------------------------------------cchhhhHHHHhhhh
Q 042392          304 YFDKDNSGYDEF--RAMVES----------------------------------------------PQTIRNVSHIYTDK  335 (436)
Q Consensus       304 ~~D~~~~G~i~~--~el~~~----------------------------------------------~~~~~~~~~~~~~~  335 (436)
                      .+|++++|.|+.  .|+...                                              .++..+++..+.. 
T Consensus       680 ~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~-  758 (900)
T 1qxp_A          680 QLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNK-  758 (900)
T ss_dssp             HSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC-
T ss_pred             hhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHH-
Confidence            999999998754  332211                                              1123333333321 


Q ss_pred             hhhcCCCC---chhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHH
Q 042392          336 AKKFGLGN---TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA  412 (436)
Q Consensus       336 ~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~  412 (436)
                         ++...   .....+.+.+..+++.+|.|++|.|+|+||..++....      .++.+|+.||+|++|+|+.+||+.+
T Consensus       759 ---~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~~------~l~~~F~~~D~d~dG~Is~~El~~~  829 (900)
T 1qxp_A          759 ---VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIK------KWQGIYKRFETDRSGTIGSNELPGA  829 (900)
T ss_dssp             -------CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHHH------HHSSCC----CCSCC-------CCT
T ss_pred             ---hcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHHH------HHHHHHHHhCCCCCCccCHHHHHHH
Confidence               11100   11345667899999999999999999999999886543      6889999999999999999999999


Q ss_pred             HHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          413 FKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       413 l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |..+|.. ++++++.|++.+| |+|
T Consensus       830 l~~~g~~ls~~~~~~l~~~~d-d~d  853 (900)
T 1qxp_A          830 FEAAGFHLNQHIYSMIIRRYS-DET  853 (900)
T ss_dssp             TGGGTCCCCSCCCC---------CC
T ss_pred             HHhcCCCCCHHHHHHHHHHhc-CCC
Confidence            9999877 8899999999988 654

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.81  E-value=1.2e-20  Score=201.38  Aligned_cols=182  Identities=21%  Similarity=0.254  Sum_probs=137.4

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC--------CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE  293 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~--------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~  293 (436)
                      +...++.+|..+| +.+|.|+.+||..+++.++.        .++.+++..+++.+|.|++|.|+|.||+..+...    
T Consensus       532 ~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~----  606 (900)
T 1qxp_A          532 IDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI----  606 (900)
T ss_dssp             ---------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH----
T ss_pred             HHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence            3778999999999 99999999999999998764        7899999999999999999999999999887543    


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                        ..++.+|+.||+|++|+|+..||..++..+                   +..++++++..+++.+| |++|.|+|+||
T Consensus       607 --~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-------------------g~~l~~~~~~~l~~~~d-d~dg~I~~~eF  664 (900)
T 1qxp_A          607 --RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA-------------------GFKLPCQLHQVIVARFA-DDELIIDFDNF  664 (900)
T ss_dssp             --HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT-------------------TEECCHHHHHHHHHHTS-CSSSBCCHHHH
T ss_pred             --HHHHHHHHhhCCCCCCeECHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhC-CCCCeEcHHHH
Confidence              579999999999999999999997653222                   33455668999999999 99999999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhhccCCCC---------------------------------------------------
Q 042392          374 VNLMTDIYKLETPELLEKAFQYLDKNSDQ---------------------------------------------------  402 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G---------------------------------------------------  402 (436)
                      +.++...      +.++.+|+.+|+|++|                                                   
T Consensus       665 ~~~~~~~------~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~  738 (900)
T 1qxp_A          665 VRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFV  738 (900)
T ss_dssp             HHHHHHH------HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CC
T ss_pred             HHHHHHH------HHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHH
Confidence            9987643      2345555555555555                                                   


Q ss_pred             -------cccHHHHHHHHHhCC--------CC-ChHHHHHHHHhhccCCC
Q 042392          403 -------FITVNELETAFKENN--------MG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       403 -------~I~~~el~~~l~~~~--------~~-~~~e~~~~~~~~d~~~d  436 (436)
                             .|+.+||+.+|..++        .. +.++++.|++.+|.|+|
T Consensus       739 ~~D~~~G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~d  788 (900)
T 1qxp_A          739 QLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTT  788 (900)
T ss_dssp             CCTTCSSCBCHHHHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSS
T ss_pred             HhcCCCCccCHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCC
Confidence                   557888988887655        23 67899999999999875

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.81  E-value=1.6e-19  Score=158.84  Aligned_cols=152  Identities=20%  Similarity=0.337  Sum_probs=119.1

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL  298 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l  298 (436)
                      +.+++..++.+|..+|.+++|.|+.+|+..+++.++..++..++..+|+.+|.|++|.|+|.||+..+.........+.+
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~  111 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI  111 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence            56778889999999999999999999999999999999999999999999999999999999999988765444556789


Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc-CCCCcccHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI-DGNGNIDFIEFVNLM  377 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~g~i~f~EF~~~~  377 (436)
                      +.+|+.+|.|++|+|+..||..++..+..-..            ..+...+++++..+++.+|. |++|.|+|+||+.++
T Consensus       112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~------------~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~  179 (204)
T 3e3r_A          112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKV------------RSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYY  179 (204)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHH------------HTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHH
T ss_pred             HHHHHHhCcCCCCeEeHHHHHHHHccccCCcc------------ccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHH
Confidence            99999999999999999999776432200000            01334456678888888887 888888888888888


Q ss_pred             Hhhhc
Q 042392          378 TDIYK  382 (436)
Q Consensus       378 ~~~~~  382 (436)
                      .....
T Consensus       180 ~~~~~  184 (204)
T 3e3r_A          180 SGVSA  184 (204)
T ss_dssp             HHHHH
T ss_pred             HHcCc
Confidence            77653

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.81  E-value=5e-20  Score=152.33  Aligned_cols=139  Identities=21%  Similarity=0.386  Sum_probs=119.0

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~  296 (436)
                      ++++++..++.+|..+|.+++|.|+.+||..+++.++..++..++..++..    ++|.|+|.||+..+... .......
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~   76 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED   76 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence            367889999999999999999999999999999999999999999888776    89999999999988754 3344567


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+.+
T Consensus        77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------------------g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~  137 (143)
T 3j04_B           77 VIRNAFACFDEEASGFIHEDHLRELLTTM-------------------GDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI  137 (143)
T ss_dssp             HHHHHHTTSCSSSCCCCCTTTHHHHHHTS-------------------SSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHH
T ss_pred             HHHHHHHHHCCCCCCeEcHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHH
Confidence            89999999999999999999997653222                   33455678999999999999999999999998


Q ss_pred             HHh
Q 042392          377 MTD  379 (436)
Q Consensus       377 ~~~  379 (436)
                      +..
T Consensus       138 ~~~  140 (143)
T 3j04_B          138 LKH  140 (143)
T ss_dssp             HHS
T ss_pred             Hhc
Confidence            864

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.81  E-value=5.2e-20  Score=154.06  Aligned_cols=120  Identities=17%  Similarity=0.334  Sum_probs=100.0

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..+.++++++|+.||+|++|+|+..||..++..+                   +..+++.++..++.    +.+|.|+|+
T Consensus        12 ~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~l-------------------g~~~~~~~~~~~~~----~~~~~i~f~   68 (153)
T 3i5g_B           12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL-------------------GRVPPDDELNAMLK----ECPGQLNFT   68 (153)
T ss_dssp             HHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHT-------------------TSCCCHHHHHHHHH----TSSSCCCSH
T ss_pred             HHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-------------------CCCccHHHHHHHHH----hccCCccHH
Confidence            4456789999999999999999999997664333                   33445556776664    457889999


Q ss_pred             HHHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccC
Q 042392          372 EFVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRD  434 (436)
Q Consensus       372 EF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~  434 (436)
                      ||+.++...... ...+.++.||+.||+|++|+||.+||+++|..+|.+ +++|+++||+++|.|
T Consensus        69 ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~  133 (153)
T 3i5g_B           69 AFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK  133 (153)
T ss_dssp             HHHHTTTTTTTTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE
T ss_pred             HHHHHHHhhhcccccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC
Confidence            999988766543 346789999999999999999999999999999998 999999999999876

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.81  E-value=7.6e-20  Score=152.33  Aligned_cols=125  Identities=30%  Similarity=0.455  Sum_probs=104.3

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ....+++.+|..+|.|++|.|+..||..++..              +|     ..++..++..+++.+|.|++|.|+|+|
T Consensus         7 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------~g-----~~~~~~~~~~l~~~~d~~~~g~i~~~e   67 (148)
T 1exr_A            7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRS--------------LG-----QNPTEAELQDMINEVDADGNGTIDFPE   67 (148)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------HT-----CCCCHHHHHHHHHHHCTTCSSSEEHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------cC-----CCCCHHHHHHHHHHHCCCCCCcCcHHH
Confidence            34567999999999999999999999765322              23     334556799999999999999999999


Q ss_pred             HHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++..... ....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++++++.+|.|+|
T Consensus        68 F~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~d  133 (148)
T 1exr_A           68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGD  133 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSS
T ss_pred             HHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            9998765432 2234679999999999999999999999999999988 99999999999998875

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.80  E-value=4.4e-19  Score=150.61  Aligned_cols=142  Identities=20%  Similarity=0.287  Sum_probs=120.0

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC-CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      ..+++++...+..+|..+|.+++|.|+.+||..+++.++. .++..++..++...    +|.|+|.||+..+.... ...
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~   92 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD   92 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence            3568889999999999999999999999999999999999 99999999999874    79999999999876542 334


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|+.||+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||
T Consensus        93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~D~d~dg~I~~~eF  153 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-------------------GGRFTPEEIKNMWAAFPPDVAGNVDYKNI  153 (166)
T ss_pred             cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-------------------CCCCCHHHHHHHHHhcCCCCCCeEeHHHH
Confidence            56789999999999999999999997653221                   33456678999999999999999999999


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.++...
T Consensus       154 ~~~~~~~  160 (166)
T 2mys_B          154 CYVITHG  160 (166)
T ss_pred             HHHHHhc
Confidence            9888654

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.80  E-value=1.8e-20  Score=162.74  Aligned_cols=144  Identities=45%  Similarity=0.709  Sum_probs=124.6

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      ..++++++..++.+|..+|.+.+|.|+.+||..++..++..++..++..+|+.+|.|++|.|+|.||+..+.........
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~   81 (188)
T 1s6i_A            2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (188)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence            34677888899999999999999999999999999999999999999999999999999999999999987655444445


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..++.+|+.+|+|++|+|+..||..++..+              |+       +++++..+++.+|.|++|.|+|+||+.
T Consensus        82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~--------------g~-------~~~~~~~~~~~~D~d~dG~Is~~EF~~  140 (188)
T 1s6i_A           82 ENLVSAFSYFDKDGSGYITLDEIQQACKDF--------------GL-------DDIHIDDMIKEIDQDNDGQIDYGEFAA  140 (188)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTTT--------------TC-------CTTHHHHHHHHHCSSSSSEEETTHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHc--------------CC-------CHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence            678999999999999999999998763322              22       234689999999999999999999999


Q ss_pred             HHHhh
Q 042392          376 LMTDI  380 (436)
Q Consensus       376 ~~~~~  380 (436)
                      ++...
T Consensus       141 ~~~~~  145 (188)
T 1s6i_A          141 MMRKR  145 (188)
T ss_dssp             TTSCC
T ss_pred             HHHHc
Confidence            88643

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.80  E-value=2.1e-19  Score=148.31  Aligned_cols=123  Identities=20%  Similarity=0.352  Sum_probs=105.0

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++++|+.+|+|++|.|+..||..++..+              |     ..++..++..+++.+|.|++|.|+|+||
T Consensus         4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~--------------~-----~~~~~~~~~~l~~~~d~~~~g~i~~~eF   64 (142)
T 2bl0_C            4 QVSEFKEAFELFDSERTGFITKEGLQTVLKQF--------------G-----VRVEPAAFNEMFNEADATGNGKIQFPEF   64 (142)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH--------------T-----CCCCHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh--------------C-----CCCCHHHHHHHHHHhCcCCCCeeeHHHH
Confidence            45679999999999999999999997653222              3     2345567999999999999999999999


Q ss_pred             HHHHHhhh-ccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIY-KLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++.... .....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+| |+|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~d  128 (142)
T 2bl0_C           65 LSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEK  128 (142)
T ss_dssp             HHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSS
T ss_pred             HHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCC
Confidence            99887643 33456789999999999999999999999999999988 9999999999999 765

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.80  E-value=2.3e-19  Score=156.28  Aligned_cols=167  Identities=21%  Similarity=0.267  Sum_probs=123.6

Q ss_pred             CChhhHHHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCCCC-CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          218 LPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSML-TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~~-s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      ++.++   +..+|..+|.+ ++|.|+.+|+..++..++... +...+..+|+.+|.|++|.|+|.||+..+.........
T Consensus        22 ~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~   98 (193)
T 1bjf_A           22 FTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE   98 (193)
T ss_dssp             CCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHH
T ss_pred             CCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHH
Confidence            44444   55667777777 899999999999999987644 56778999999999999999999999988766555566


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcC--CCCc-hhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG--LGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      +.++.+|+.+|.|++|+|+..||..++..+          ....|  ...+ .+...+..+..+|+.+|.|++|.|+|+|
T Consensus        99 ~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E  168 (193)
T 1bjf_A           99 QKLKWAFSMYDLDGNGYISKAEMLEIVQAI----------YKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEE  168 (193)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH----------HTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHH
T ss_pred             HHHHHHHhhcCCCCCCeECHHHHHHHHHHH----------HHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHH
Confidence            789999999999999999999997653322          01112  0111 1123455799999999999999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhccCCCCcc
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDKNSDQFI  404 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I  404 (436)
                      |+.++..      ..++...| .+|+|+||.|
T Consensus       169 f~~~~~~------~~~~~~~~-~~D~~~dG~i  193 (193)
T 1bjf_A          169 FIRGAKS------DPSIVRLL-QCDPSSAGQF  193 (193)
T ss_dssp             HHHHHHH------CTHHHHTT-CC--------
T ss_pred             HHHHHhc------CHHHHHHh-ccCCCCCCCC
Confidence            9998863      23688889 9999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.80  E-value=5e-19  Score=176.78  Aligned_cols=169  Identities=32%  Similarity=0.501  Sum_probs=127.0

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh----cCCCCC----------
Q 042392          194 ILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK----VGSMLT----------  258 (436)
Q Consensus       194 ~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~----~~~~~s----------  258 (436)
                      +.....|.....+....+..++..+ +.++...+..+|..+|.+++|.|+.+||..++..    +|..++          
T Consensus       300 ~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~  379 (486)
T 3mwu_A          300 MTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI  379 (486)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhh
Confidence            3445566666666666666666655 8899999999999999999999999999665544    465555          


Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhh
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKK  338 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~  338 (436)
                      .+++..+|+.+|.|++|.|+|+||+..+.........+.++.+|+.||+|+||+|+.+||..++..+             
T Consensus       380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-------------  446 (486)
T 3mwu_A          380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA-------------  446 (486)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-------------
Confidence            8899999999999999999999999988766666677889999999999999999999998763332             


Q ss_pred             cCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                            +..++++++.++|+.+|.|+||.|+|+||+.++....
T Consensus       447 ------g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  483 (486)
T 3mwu_A          447 ------DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFV  483 (486)
T ss_dssp             -------------------CCCCSSCSSSBCHHHHHHHHHHHC
T ss_pred             ------CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhh
Confidence                  4456677899999999999999999999999887654

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.79  E-value=3.1e-19  Score=155.72  Aligned_cols=145  Identities=17%  Similarity=0.196  Sum_probs=112.7

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELR-----AGLTKVGSMLTEF-----DVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~-----~~l~~~~~~~s~~-----~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..++++++..+..+|..+|.+++|.|+.+||.     .+++.++..++..     ++..+|+.+|.|++|.|+|.||+..
T Consensus        12 ~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   91 (195)
T 1qv0_A           12 DFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG   91 (195)
T ss_dssp             CTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHH
Confidence            44588999999999999999999999999999     6788888887776     6899999999999999999999987


Q ss_pred             HHhhhhh-------ccHHHHH----HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHH
Q 042392          286 TIQRQKL-------ERSEYLS----KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK  354 (436)
Q Consensus       286 ~~~~~~~-------~~~~~l~----~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (436)
                      +......       ...+.++    .+|+.+|+|++|+|+..||..++..+                   +..++++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------------------g~~~~~~~~~  152 (195)
T 1qv0_A           92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-------------------GISPSQEDCE  152 (195)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH-------------------SSCCCHHHHH
T ss_pred             HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHH
Confidence            6543221       1112233    89999999999999999987653222                   2334566788


Q ss_pred             HHHHccccCCCCcccHHHHHHHHHh
Q 042392          355 KLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       355 ~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      .+++.+|.|++|.|+|+||+.++..
T Consensus       153 ~~~~~~D~d~dg~i~~~eF~~~~~~  177 (195)
T 1qv0_A          153 ATFRHCDLDNAGDLDVDEMTRQHLG  177 (195)
T ss_dssp             HHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            9999999999999999999887754

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.79  E-value=4.8e-19  Score=154.05  Aligned_cols=143  Identities=13%  Similarity=0.124  Sum_probs=102.9

Q ss_pred             hcCChhhHHHHHHHhhhh-CCCCCCccCHHHHHHHHHhc----CCCCCHHHHHHHH-----------HHHcCCCCCcccH
Q 042392          216 EYLPGEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKV----GSMLTEFDVKQLM-----------EAADMDGNGAIDY  279 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~-D~~~~g~i~~~eL~~~l~~~----~~~~s~~~i~~l~-----------~~~d~d~~g~i~~  279 (436)
                      ..+++++...+..+|..+ |.+++|.|+.+|+..++..+    +..++..++..++           +.+|.|++|.|++
T Consensus         4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~   83 (191)
T 2ccm_A            4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK   83 (191)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred             hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence            456788899999999999 99999999999999999998    8888889999888           8999999999999


Q ss_pred             HHHHHHHHhhhh---------hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhH
Q 042392          280 TEFTAATIQRQK---------LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAM  350 (436)
Q Consensus       280 ~EF~~~~~~~~~---------~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (436)
                      +||+..+.....         ......++.+|+.+|+|++|+|+..||..++..              +|       +++
T Consensus        84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~--------------~g-------~~~  142 (191)
T 2ccm_A           84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS--------------YG-------IPK  142 (191)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT--------------TT-------CCH
T ss_pred             HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------hC-------CCH
Confidence            999987754321         112344566666666666666666666443111              11       223


Q ss_pred             HHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          351 NMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       351 ~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +++..+++.+|.|+||.|+|+||+.++..
T Consensus       143 ~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  171 (191)
T 2ccm_A          143 SDCDAAFDTLSDGGKTMVTREIFARLWTE  171 (191)
T ss_dssp             HHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            35566666666666666666666655543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.79  E-value=5.4e-19  Score=177.37  Aligned_cols=165  Identities=28%  Similarity=0.407  Sum_probs=138.1

Q ss_pred             HHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc--------CCCCCHHHHHHHH
Q 042392          196 RMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV--------GSMLTEFDVKQLM  266 (436)
Q Consensus       196 ~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~--------~~~~s~~~i~~l~  266 (436)
                      .++.|.....+......+++..+ ++++...++.+|..+|.+.+|.|+.+||..++..+        +..++.+++..+|
T Consensus       326 ~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~  405 (504)
T 3q5i_A          326 NMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL  405 (504)
T ss_dssp             HHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence            44445555556666666666665 89999999999999999999999999999999887        5578899999999


Q ss_pred             HHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchh
Q 042392          267 EAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ  346 (436)
Q Consensus       267 ~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (436)
                      +.+|.|++|.|+|+||+..+.........+.++.+|+.||+|++|+|+.+||..++..                     .
T Consensus       406 ~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~---------------------~  464 (504)
T 3q5i_A          406 KEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL---------------------T  464 (504)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC---------------------S
T ss_pred             HHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh---------------------C
Confidence            9999999999999999998876666666788999999999999999999999654211                     1


Q ss_pred             hhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          347 FRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       347 ~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      .++++++.++|+.+|.|+||.|+|+||+.++....
T Consensus       465 ~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  499 (504)
T 3q5i_A          465 SISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC  499 (504)
T ss_dssp             CCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence            23556899999999999999999999999887654

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.79  E-value=5.1e-19  Score=151.55  Aligned_cols=142  Identities=18%  Similarity=0.222  Sum_probs=115.4

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHH----HHHhcCCCCCHHHHH-----------HHHHHHcCCCCCcccHHHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRA----GLTKVGSMLTEFDVK-----------QLMEAADMDGNGAIDYTEFT  283 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~----~l~~~~~~~s~~~i~-----------~l~~~~d~d~~g~i~~~EF~  283 (436)
                      +++++..++.+|..+|.+++|.|+.+|+..    +++.++.+++..++.           .+|+.+|.|++|.|+|.||+
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~   81 (176)
T 1nya_A            2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI   81 (176)
T ss_dssp             CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            577889999999999999999999999999    678889999988887           88999999999999999999


Q ss_pred             HHHHhhhhhcc--------HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH
Q 042392          284 AATIQRQKLER--------SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK  355 (436)
Q Consensus       284 ~~~~~~~~~~~--------~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (436)
                      ..+........        ...++.+|+.+|+|++|+|+..||..++..              +|       .+++++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~--------------~g-------~~~~~~~~  140 (176)
T 1nya_A           82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA--------------LG-------MSKAEAAE  140 (176)
T ss_dssp             HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHH--------------TT-------CCHHHHHH
T ss_pred             HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH--------------hC-------CCHHHHHH
Confidence            98765532222        356899999999999999999998654222              12       34456888


Q ss_pred             HHHccccCCCCcccHHHHHHHHHhhh
Q 042392          356 LVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       356 ~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      +++.+|.|++|.|+|+||+.++....
T Consensus       141 ~~~~~D~d~dg~i~~~ef~~~~~~~~  166 (176)
T 1nya_A          141 AFNQVDTNGNGELSLDELLTAVRDFH  166 (176)
T ss_dssp             HHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred             HHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence            88888888888888888888776543

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.79  E-value=3.6e-19  Score=154.70  Aligned_cols=170  Identities=22%  Similarity=0.315  Sum_probs=133.9

Q ss_pred             CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchh
Q 042392          237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDE  314 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~  314 (436)
                      +.+.++.+++..+.+..  .++.+++..+|+.+|.+ ++|.|++.||...+.... .......+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~   81 (190)
T 1fpw_A            4 KTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIH   81 (190)
T ss_dssp             CSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEEC
T ss_pred             ccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEe
Confidence            45678888888876654  57999999999999987 899999999999876542 223456799999999999999999


Q ss_pred             hhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc------------
Q 042392          315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK------------  382 (436)
Q Consensus       315 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~------------  382 (436)
                      +.||..++..+              +     ...+++++..+|+.+|.|++|.|+++||..++.....            
T Consensus        82 ~~ef~~~~~~~--------------~-----~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~  142 (190)
T 1fpw_A           82 FEEFITVLSTT--------------S-----RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE  142 (190)
T ss_dssp             HHHHHHHHHHH--------------S-----CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCC
T ss_pred             HHHHHHHHHHH--------------c-----cCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence            99997653222              1     1223457899999999999999999999998876421            


Q ss_pred             cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhc
Q 042392          383 LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVG  432 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d  432 (436)
                      ....+.++.+|+.+|.|+||+|+.+||..++...     ..+.+++...|
T Consensus       143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-----~~~~~~~~~~d  187 (190)
T 1fpw_A          143 ATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD-----PSIIGALNLYD  187 (190)
T ss_dssp             CCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS-----TTHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC-----hHHHHHHhhcc
Confidence            1335679999999999999999999999999853     23555666554

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.79  E-value=3.7e-19  Score=154.60  Aligned_cols=144  Identities=17%  Similarity=0.189  Sum_probs=117.5

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELR-----AGLTKVGSMLTEF-----DVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~-----~~l~~~~~~~s~~-----~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .++++...+..+|..+|.+++|.|+.+||.     .+++.++..++..     ++..+|+.+|.|++|.|+|.||+..+.
T Consensus        10 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~   89 (191)
T 1uhk_A           10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWK   89 (191)
T ss_dssp             TCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHH
Confidence            478889999999999999999999999999     7888899888877     689999999999999999999998865


Q ss_pred             hhhhh-------ccHHHHH----HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHH
Q 042392          288 QRQKL-------ERSEYLS----KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL  356 (436)
Q Consensus       288 ~~~~~-------~~~~~l~----~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (436)
                      .....       ...+.++    .+|+.+|+|++|+|+..||..++..+                   +..++++++..+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-------------------g~~~~~~~~~~~  150 (191)
T 1uhk_A           90 KLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA-------------------GIIQSSEDCEET  150 (191)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------TSCCSHHHHHHH
T ss_pred             HHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHHHH
Confidence            43221       1112233    89999999999999999997653222                   233456689999


Q ss_pred             HHccccCCCCcccHHHHHHHHHhh
Q 042392          357 VLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       357 ~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                      ++.+|.|++|.|+|+||+.++...
T Consensus       151 ~~~~D~d~dG~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          151 FRVCDIDESGQLDVDEMTRQHLGF  174 (191)
T ss_dssp             HHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHH
Confidence            999999999999999999877643

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.79  E-value=3.1e-19  Score=147.75  Aligned_cols=132  Identities=20%  Similarity=0.337  Sum_probs=113.8

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh--hhhccHHHHHHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR--QKLERSEYLSKAFQ  303 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~--~~~~~~~~l~~~F~  303 (436)
                      ++.+|..+|.+++|.|+.+|+..+++.++..++..++..++..   +++|.|+|.||+..+...  ........++.+|+
T Consensus         7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~   83 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR   83 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence            8999999999999999999999999999999999999999988   889999999999988765  34456678999999


Q ss_pred             HhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          304 YFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       304 ~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      .+|+|++|+|+..||..++..              +     +..++++++..+++.+|.|++|.|+|+||+.++..
T Consensus        84 ~~D~d~~G~i~~~e~~~~l~~--------------~-----g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           84 ALDKEGNGTIQEAELRQLLLN--------------L-----GDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             HHCSSSSSEEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HhCCCCCCeEcHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999765322              2     23345668999999999999999999999988764

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.79  E-value=2.3e-20  Score=155.94  Aligned_cols=141  Identities=18%  Similarity=0.269  Sum_probs=114.3

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC--CCCcccHHHHHHHHHhhhh---h
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD--GNGAIDYTEFTAATIQRQK---L  292 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d--~~g~i~~~EF~~~~~~~~~---~  292 (436)
                      ++++++..++.+|..+|.+++|.|+.+||..+++.++..++..++..+++.+|.+  ++|.|+|.||+..+.....   .
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~   83 (151)
T 1w7j_B            4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ   83 (151)
T ss_dssp             -------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCC
Confidence            5677888999999999999999999999999999999999999999999999999  9999999999998765432   2


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++.+|+.+|+|++|+|+..||..++..              +     +..++++++..+++.+| |++|.|+|+|
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~d-~~dg~i~~~e  143 (151)
T 1w7j_B           84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT--------------L-----GEKMTEEEVETVLAGHE-DSNGCINYEA  143 (151)
T ss_dssp             ----CCHHHHHTTCTTSSSEEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHTTCC-CTTSEEEHHH
T ss_pred             CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHhcc-CCCCeEeHHH
Confidence            23456889999999999999999999765322              2     33456678999999999 9999999999


Q ss_pred             HHHHHH
Q 042392          373 FVNLMT  378 (436)
Q Consensus       373 F~~~~~  378 (436)
                      |+.++.
T Consensus       144 F~~~~~  149 (151)
T 1w7j_B          144 FLKHIL  149 (151)
T ss_dssp             HHHHTC
T ss_pred             HHHHHh
Confidence            998774

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.79  E-value=5.2e-20  Score=174.87  Aligned_cols=144  Identities=14%  Similarity=0.157  Sum_probs=99.4

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc--------------chh----hHHHHHHHHHHHHHhcCCCCC
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--------------KYA----ENDMMIRREIQIRRLLSGQPN   88 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------~~~----~~~~~~~~E~~~l~~l~~h~n   88 (436)
                      |.+.+.||.|+||.||+|.+ .+|+.||||+++.....              ...    .......+|...|..+. +++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EEG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hcC
Confidence            99999999999999999997 57999999987643110              000    01112345666666662 333


Q ss_pred             eeeceeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC--
Q 042392           89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN--  166 (436)
Q Consensus        89 iv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~--  166 (436)
                      + .....+... ..+|||||++|++|.++.      ....+..++.||+.+|.+||++|||||||||.|||+...+..  
T Consensus       175 v-~vp~p~~~~-~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          175 F-PVPEPIAQS-RHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             C-SCCCEEEEE-TTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSC
T ss_pred             C-CCCeeeecc-CceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccc
Confidence            2 222222111 237999999998885432      234567789999999999999999999999999999532110  


Q ss_pred             -----CcEEEEecCCcccc
Q 042392          167 -----ALLKVTDFGSALLF  180 (436)
Q Consensus       167 -----~~~kl~DFG~a~~~  180 (436)
                           ..+.|+||+-+...
T Consensus       247 ~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             TTSEEEEEEECCCTTCEET
T ss_pred             ccccccceEEEEeCCcccC
Confidence                 14899999988754

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.79  E-value=1.5e-19  Score=158.28  Aligned_cols=126  Identities=20%  Similarity=0.282  Sum_probs=79.5

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|+.+|+|++|.|+..||..++..+                   +..+++.++..+++.+|.|++|.|+|+
T Consensus        53 ~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-------------------g~~~~~~~~~~l~~~~D~d~~g~I~~~  113 (197)
T 3pm8_A           53 DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI-------------------GYQKIPPDIHQVLRDIDSNASGQIHYT  113 (197)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------C----CHHHHHHHHC-------CEEHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCeEcHH
Confidence            3445567777888888888887777776543222                   222344567777788888778888888


Q ss_pred             HHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC--CCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN--NMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~--~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++.........+.++.+|+.||+|++|+||.+||+.++...  +.. ++++++.+++.+|.|+|
T Consensus       114 EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~d  181 (197)
T 3pm8_A          114 DFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGD  181 (197)
T ss_dssp             HHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCC
Confidence            887766655544556677788888888888888888888877766  444 67777778887777764

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.79  E-value=3.6e-18  Score=157.03  Aligned_cols=192  Identities=18%  Similarity=0.217  Sum_probs=147.1

Q ss_pred             cCChhhHHHHH-HHhhhhCCCCCCccCHHHHHHH-----------HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          217 YLPGEETQALK-EKFIEMDTDKNGTLSYDELRAG-----------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       217 ~l~~e~~~~l~-~~F~~~D~~~~g~i~~~eL~~~-----------l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .++.+++..+. .+|..+|.+++|.|+.+|+..+           +...+...+.+++..+|+.+|.|++|.|+..||..
T Consensus        49 ~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~  128 (272)
T 2be4_A           49 KITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKN  128 (272)
T ss_dssp             CCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHH
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence            45666665544 5679999999999999999998           55666778899999999999999999999999998


Q ss_pred             HHHhh----hhhccHHH----HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHH
Q 042392          285 ATIQR----QKLERSEY----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL  356 (436)
Q Consensus       285 ~~~~~----~~~~~~~~----l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (436)
                      .+...    ........    +..+|+.+|.|++|.|++.||...+...+.+       ....++...+...+...+..+
T Consensus       129 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  201 (272)
T 2be4_A          129 FLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENF-------LLQFKMDASSQVERKRDFEKI  201 (272)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCS-------STTSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHH-------HhhhhhhhccccccHHHHHHH
Confidence            87644    11222233    4569999999999999999997764321000       000001111334456689999


Q ss_pred             HHccccCCCCcccHHHHHHHHHhhhc----cCCHHHHHH----HHHhhccCCCCcccHHHHHHHHHh
Q 042392          357 VLQGDIDGNGNIDFIEFVNLMTDIYK----LETPELLEK----AFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       357 ~~~~d~~~~g~i~f~EF~~~~~~~~~----~~~~~~~~~----~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      |+.+|.|++|.|+.+||..++.....    ..+++++..    +|+.+|.|+||.|+.+||..++..
T Consensus       202 F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~  268 (272)
T 2be4_A          202 FAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGL  268 (272)
T ss_dssp             HHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTC
T ss_pred             HHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHcc
Confidence            99999999999999999998876654    466777766    999999999999999999998863

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.78  E-value=8.2e-20  Score=151.97  Aligned_cols=121  Identities=18%  Similarity=0.245  Sum_probs=101.5

Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcc-ccCCCCcccHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG-DIDGNGNIDFIEFVN  375 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~g~i~f~EF~~  375 (436)
                      +++++|..+|+|++|.|+..||..++.              .+|.     .++..++..+++.+ |.|++|.|+|+||+.
T Consensus         5 ~l~~~F~~~D~d~~G~i~~~el~~~l~--------------~~g~-----~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~   65 (148)
T 1m45_A            5 ANKDIFTLFDKKGQGAIAKDSLGDYLR--------------AIGY-----NPTNQLVQDIINADSSLRDASSLTLDQITG   65 (148)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHH--------------HTTC-----CCCHHHHHHHHHC--CC--CCEEEHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHH--------------HhCC-----CCCHHHHHHHHHHhhCCCCCCeEcHHHHHH
Confidence            467899999999999999999976532              2233     34556899999999 999999999999999


Q ss_pred             HHHhh------hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          376 LMTDI------YKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       376 ~~~~~------~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ++...      ......+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~d  133 (148)
T 1m45_A           66 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSN  133 (148)
T ss_dssp             HHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTT
T ss_pred             HHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCC
Confidence            88776      344556789999999999999999999999999999988 99999999999998875

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.78  E-value=7.2e-19  Score=147.69  Aligned_cols=142  Identities=16%  Similarity=0.377  Sum_probs=117.2

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~  293 (436)
                      ...+++++...++.+|..+|.+++|.|+.+||..+++.++..++..++..+++    +++|.|+|.||+..+... ....
T Consensus         9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~   84 (156)
T 1wdc_B            9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD   84 (156)
T ss_dssp             ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred             hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence            34578889999999999999999999999999999999999999999998885    478999999999988654 2334


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|+.||+|++|+|+..||..++..              +     +..++++++..+++.+|.| +|.|+|+||
T Consensus        85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~d~~-dg~i~~~eF  144 (156)
T 1wdc_B           85 SEETIRNAFAMFDEQETKKLNIEYIKDLLEN--------------M-----GDNFNKDEMRMTFKEAPVE-GGKFDYVKF  144 (156)
T ss_dssp             CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHHHCCEE-TTEECHHHH
T ss_pred             hHHHHHHHHHHHCcCCCCccCHHHHHHHHHH--------------h-----CCCCCHHHHHHHHHhcCCC-CCEEeHHHH
Confidence            5678999999999999999999998765222              1     3345566899999999999 999999999


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.++...
T Consensus       145 ~~~~~~~  151 (156)
T 1wdc_B          145 TAMIKGS  151 (156)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9887653

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.78  E-value=1.5e-18  Score=149.82  Aligned_cols=138  Identities=21%  Similarity=0.295  Sum_probs=64.0

Q ss_pred             CHHHHHHHHHHHcC-CCCCcccHHHHHHHHHhhhhh-ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhh
Q 042392          258 TEFDVKQLMEAADM-DGNGAIDYTEFTAATIQRQKL-ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK  335 (436)
Q Consensus       258 s~~~i~~l~~~~d~-d~~g~i~~~EF~~~~~~~~~~-~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~  335 (436)
                      +.+++..+++.++. |++|.|++.||...+...... .....+..+|+.+|.|++|.|++.||..++..+          
T Consensus        16 s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~----------   85 (183)
T 1s6c_A           16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL----------   85 (183)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH----------
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH----------
Confidence            44455555555544 455555555555444332211 233444555555555555555555554331111          


Q ss_pred             hhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc------------cCCHHHHHHHHHhhccCCCCc
Q 042392          336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK------------LETPELLEKAFQYLDKNSDQF  403 (436)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~------------~~~~~~~~~~F~~~D~d~~G~  403 (436)
                               +...+.+.+..+|+.+|.|++|.|+++||..++.....            ....+.+..+|+.+|+|+||.
T Consensus        86 ---------~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~  156 (183)
T 1s6c_A           86 ---------LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI  156 (183)
T ss_dssp             ---------HHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSE
T ss_pred             ---------cCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCc
Confidence                     11112334555555555555555555555554443210            011244555666666666666


Q ss_pred             ccHHHHHHHHH
Q 042392          404 ITVNELETAFK  414 (436)
Q Consensus       404 I~~~el~~~l~  414 (436)
                      |+.+||..++.
T Consensus       157 i~~~Ef~~~~~  167 (183)
T 1s6c_A          157 VTLDEFLESXQ  167 (183)
T ss_dssp             ECHHHHHHHTT
T ss_pred             EeHHHHHHHHh
Confidence            66666655554

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.78  E-value=6.2e-19  Score=154.14  Aligned_cols=141  Identities=25%  Similarity=0.400  Sum_probs=123.0

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~  294 (436)
                      ..++++++..++.+|..+|.+++|.|+..||..+++.+|..++..++..++..+    +|.|+|.||+..+... .....
T Consensus        49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~  124 (196)
T 3dtp_E           49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE  124 (196)
T ss_dssp             CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence            456889999999999999999999999999999999999999999999999887    8999999999988654 33445


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...+..+|+.||.|++|+|+..||..++ .+                   +..++.+++..++..+|.|++|.|+|+||+
T Consensus       125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~-------------------g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~  184 (196)
T 3dtp_E          125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TW-------------------GEKFSQDEVDQALSEAPIDGNGLIDIKKFA  184 (196)
T ss_dssp             HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HS-------------------SSCCCHHHHHHHHHSSCEETTEECHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc-------------------CCCCCHHHHHHHHHHcCCCCCCEEeHHHHH
Confidence            6789999999999999999999997663 22                   344566789999999999999999999999


Q ss_pred             HHHHhh
Q 042392          375 NLMTDI  380 (436)
Q Consensus       375 ~~~~~~  380 (436)
                      .++...
T Consensus       185 ~~l~~~  190 (196)
T 3dtp_E          185 QILTKG  190 (196)
T ss_dssp             HHHSSC
T ss_pred             HHHHcC
Confidence            988754

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.78  E-value=1.4e-18  Score=145.52  Aligned_cols=140  Identities=27%  Similarity=0.472  Sum_probs=113.3

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSEY  297 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~~  297 (436)
                      +++++..++.+|..+|.+++|.|+.+|+ ..+..++..+   ++..+|+.+|.+++|.|+|.||+..+.... .....+.
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~   76 (155)
T 3ll8_B            1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK   76 (155)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred             CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence            4678899999999999999999999999 6666666544   689999999999999999999999887653 3355678


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc----cccCCCCcccHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ----GDIDGNGNIDFIEF  373 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~~g~i~f~EF  373 (436)
                      ++.+|+.+|+|++|+|+..||..++..+                  .+..+++.++..+++.    +|.|++|.|+|+||
T Consensus        77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~------------------~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF  138 (155)
T 3ll8_B           77 LRFAFRIYDMDKDGYISNGELFQVLKMM------------------VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF  138 (155)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHH------------------HGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHH------------------hccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            9999999999999999999997653321                  0333455567777776    88888888888888


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.++...
T Consensus       139 ~~~~~~~  145 (155)
T 3ll8_B          139 CAVVGGL  145 (155)
T ss_dssp             HHHHGGG
T ss_pred             HHHHhcc
Confidence            8888654

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.78  E-value=4.7e-19  Score=150.82  Aligned_cols=133  Identities=22%  Similarity=0.241  Sum_probs=58.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC
Q 042392          263 KQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG  342 (436)
Q Consensus       263 ~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~  342 (436)
                      ..+|..+|.|++|.|+..||...+...........+..+|+.+|.|++|.|++.||...+...                 
T Consensus        31 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~-----------------   93 (169)
T 3qrx_A           31 REAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAK-----------------   93 (169)
T ss_dssp             HHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHH-----------------
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH-----------------
Confidence            334444444455555555544444333222333444444444455555554444443321110                 


Q ss_pred             CchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                       .........+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|+||.|+.+||..++
T Consensus        94 -~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  163 (169)
T 3qrx_A           94 -MGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM  163 (169)
T ss_dssp             -HHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHH
T ss_pred             -hcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence             0111223344444444444445555555554444443333344444444555555555555555544444

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.77  E-value=5.6e-19  Score=176.77  Aligned_cols=168  Identities=29%  Similarity=0.473  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC--------CCCHHHHH
Q 042392          193 VILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVK  263 (436)
Q Consensus       193 ~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~--------~~s~~~i~  263 (436)
                      .+..+..|.....+.......++..+ ++++...++++|..+|.+++|.|+.+||..++..++.        .++.+++.
T Consensus       314 ~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~  393 (494)
T 3lij_A          314 AIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVD  393 (494)
T ss_dssp             HHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHH
Confidence            33444455555556666666677665 8899999999999999999999999999999988753        45688999


Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCC
Q 042392          264 QLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN  343 (436)
Q Consensus       264 ~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~  343 (436)
                      .+|+.+|.|++|.|+|+||+..+.........+.++.+|+.||+|++|+|+.+||..++..                   
T Consensus       394 ~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-------------------  454 (494)
T 3lij_A          394 AILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL-------------------  454 (494)
T ss_dssp             HHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-------------------
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------------------
Confidence            9999999999999999999998876666667788999999999999999999999755211                   


Q ss_pred             chhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       344 ~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                        ...+++++.++|+.+|.|+||.|+|+||+.++....
T Consensus       455 --~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  490 (494)
T 3lij_A          455 --DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC  490 (494)
T ss_dssp             --CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred             --cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence              123445789999999999999999999999887654

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.77  E-value=2.9e-18  Score=148.93  Aligned_cols=157  Identities=22%  Similarity=0.297  Sum_probs=126.4

Q ss_pred             CCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhh-hhhccHHHHHHHHHHhCCCCCCchhh
Q 042392          238 NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQR-QKLERSEYLSKAFQYFDKDNSGYDEF  315 (436)
Q Consensus       238 ~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~  315 (436)
                      .+.++.+++..+....  .++.+++..+|+.+|.+ ++|.|++.||...+... ........+..+|+.+|.|++|.|++
T Consensus         5 ~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~   82 (190)
T 1g8i_A            5 NSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEF   82 (190)
T ss_dssp             CCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEH
T ss_pred             cccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeH
Confidence            3467888888877655  47899999999999988 89999999999887654 21234567999999999999999999


Q ss_pred             hhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh------------cc
Q 042392          316 RAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY------------KL  383 (436)
Q Consensus       316 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~------------~~  383 (436)
                      .||..++..+                   +...+.+.+..+|+.+|.|++|.|+++||..++....            ..
T Consensus        83 ~ef~~~~~~~-------------------~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~  143 (190)
T 1g8i_A           83 SEFIQALSVT-------------------SRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN  143 (190)
T ss_dssp             HHHHHHHHHH-------------------HHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGS
T ss_pred             HHHHHHHHHh-------------------cCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccc
Confidence            9997653322                   2223456789999999999999999999999887631            12


Q ss_pred             CCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          384 ETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       384 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ...+.++.+|+.+|+|++|.|+.+||..++..
T Consensus       144 ~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~  175 (190)
T 1g8i_A          144 TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  175 (190)
T ss_dssp             SHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            34567999999999999999999999999875

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.77  E-value=4.3e-19  Score=156.64  Aligned_cols=145  Identities=16%  Similarity=0.232  Sum_probs=113.9

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC--CCCHHHHHHHH-------HHHcCCCCCcccHHHHHHHH
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--MLTEFDVKQLM-------EAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~--~~s~~~i~~l~-------~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..++++++..+..+|..+|.+++|.|+.+||..++..++.  .++.+++..++       +.+|.|++|.|+|.||+..+
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~  107 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN  107 (208)
T ss_dssp             --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            4567788899999999999999999999999999999887  89999999999       99999999999999999987


Q ss_pred             H---------hh-hhhccHHH-HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH
Q 042392          287 I---------QR-QKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK  355 (436)
Q Consensus       287 ~---------~~-~~~~~~~~-l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (436)
                      .         .. ........ ++.+|+.+|+|++|+|+..||..++..              +|       ++++++..
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--------------~g-------~~~~~~~~  166 (208)
T 2hpk_A          108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKA--------------FD-------VPQEAAYT  166 (208)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH--------------TT-------SCTTHHHH
T ss_pred             HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH--------------hC-------cCHHHHHH
Confidence            5         11 12222333 788999999999999999999765322              22       23346889


Q ss_pred             HHHccccCCCCcccHHHHHHHHHhhh
Q 042392          356 LVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       356 ~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      ++..+|.|+||.|+|+||+.++....
T Consensus       167 ~~~~~D~d~dG~I~~~EF~~~~~~~~  192 (208)
T 2hpk_A          167 FFEKADTDKSGKLERTELVHLFRKFW  192 (208)
T ss_dssp             HHHHHCTTCCSSBCHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence            99999999999999999998887654

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.77  E-value=5.8e-19  Score=148.51  Aligned_cols=125  Identities=21%  Similarity=0.347  Sum_probs=104.0

Q ss_pred             ccHHHHHHHHHHhC-CCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          293 ERSEYLSKAFQYFD-KDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .....++++|+.+| .|++|.|+..||..++..              +|.     .++..++..+++.+|.|++|.|+|+
T Consensus        10 ~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~--------------~~~-----~~~~~~~~~l~~~~D~~~~g~i~~~   70 (158)
T 2jnf_A           10 NQVKLLETAFRDFETPEGSGRVSTDQIGIILEV--------------LGI-----QQTKSTIRQLIDEFDPFGNGDIDFD   70 (158)
T ss_dssp             HHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHH--------------TTC-----SCSHHHHHHHHHHHCTTCCSEECHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            34567899999999 999999999999765322              232     3455679999999999999999999


Q ss_pred             HHHHHHHhhhcc-----CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKL-----ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~-----~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++......     ...+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        71 eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~d  141 (158)
T 2jnf_A           71 SFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGS  141 (158)
T ss_dssp             HHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCC
T ss_pred             HHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCC
Confidence            999988765432     334569999999999999999999999999998887 99999999999998875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.77  E-value=1.9e-18  Score=172.60  Aligned_cols=169  Identities=30%  Similarity=0.474  Sum_probs=132.9

Q ss_pred             hHHHHHHHHHHHhhhhhhHHHHHHHhcC-ChhhHHHHHHHhhhhCCCCCCccCHHHHHHH----HHhcCCCCC-------
Q 042392          191 TSVILRMKQFRRMSKLKKLTVKVIVEYL-PGEETQALKEKFIEMDTDKNGTLSYDELRAG----LTKVGSMLT-------  258 (436)
Q Consensus       191 pe~~~~~~~~~~~~d~~s~~~~~~~~~l-~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~----l~~~~~~~s-------  258 (436)
                      .+.+.....|.....+.......++..+ ++++...+..+|..+|.+++|.|+.+||..+    ++.+|..++       
T Consensus       301 ~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~  380 (484)
T 3nyv_A          301 DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV  380 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHH
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhccccccccccccc
Confidence            3455566677777777776666777665 7889999999999999999999999999554    444576777       


Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhh
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKK  338 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~  338 (436)
                      .+++..+|+.+|.|++|.|+|+||+.++.........+.++.+|+.||+|+||+|+.+||..++..              
T Consensus       381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--------------  446 (484)
T 3nyv_A          381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--------------  446 (484)
T ss_dssp             HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--------------
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--------------
Confidence            889999999999999999999999998876655566778999999999999999999998654211              


Q ss_pred             cCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh
Q 042392          339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                             ...+++++.++|+.+|.|+||.|+|+||+.++...
T Consensus       447 -------~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~  481 (484)
T 3nyv_A          447 -------SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL  481 (484)
T ss_dssp             -------TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             -------cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence                   12345578888888888888888888888887654

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.77  E-value=1.7e-18  Score=145.94  Aligned_cols=125  Identities=20%  Similarity=0.351  Sum_probs=102.3

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++++|+.+|.|++|.|+..||..++..              +|.     .++..++..+++.+|.|++|.|+|+|
T Consensus        20 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~--------------~~~-----~~~~~~~~~l~~~~d~~~~g~i~~~e   80 (161)
T 3fwb_A           20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA--------------LGF-----ELPKREILDLIDEYDSEGRHLMKYDD   80 (161)
T ss_dssp             HHHHHHHHHHHHHCTTSSSEECHHHHHHHHHH--------------TTC-----CCCHHHHHHHHHHHCTTSSSCEEHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------cCC-----CCCHHHHHHHHHHhCcCCCCeEeHHH
Confidence            34567899999999999999999998665322              232     34556799999999999999999999


Q ss_pred             HHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++...... ...+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        81 F~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~  146 (161)
T 3fwb_A           81 FYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGD  146 (161)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSS
T ss_pred             HHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            99888764433 334679999999999999999999999999999888 89999999999988765

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.76  E-value=5e-18  Score=151.58  Aligned_cols=158  Identities=20%  Similarity=0.252  Sum_probs=108.4

Q ss_pred             CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhh-hccHHHHHHHHHHhCCCCCCchh
Q 042392          237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDE  314 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~~~~G~i~  314 (436)
                      +.+.++.+++....+..+  ++.+++..+++.+|.+ ++|.|++.||...+..... ......+..+|+.+|.|++|.|+
T Consensus        30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~  107 (224)
T 1s1e_A           30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK  107 (224)
T ss_dssp             --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred             CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence            345677777777776665  7788888888888774 8888888888877664432 24566778888888888888888


Q ss_pred             hhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh----c--------
Q 042392          315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY----K--------  382 (436)
Q Consensus       315 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~----~--------  382 (436)
                      +.||..++..+                   +...+++.+..+|+.+|.|++|.|+++||..++....    .        
T Consensus       108 ~~Ef~~~l~~~-------------------~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~  168 (224)
T 1s1e_A          108 FEDFVTALSIL-------------------LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE  168 (224)
T ss_dssp             HHHHHHHHHHH-------------------HHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCS
T ss_pred             HHHHHHHHHHH-------------------ccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCH
Confidence            88886553222                   1122445678888888888888888888888776541    0        


Q ss_pred             cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          383 LETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ....+.+..+|+.+|.|+||.|+.+||..++..
T Consensus       169 ~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  201 (224)
T 1s1e_A          169 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE  201 (224)
T ss_dssp             SSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            112366888888888888888888888888863

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.76  E-value=1.1e-18  Score=146.50  Aligned_cols=124  Identities=19%  Similarity=0.235  Sum_probs=104.6

Q ss_pred             ccHHHHHHHHHHhCC--CCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDK--DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~--~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....++++|+.+|.  |++|.|+..||..++..              +|.     .++..++..+ +.+|.|++|.|+|
T Consensus         6 ~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~--------------~g~-----~~~~~~~~~l-~~~D~~~~g~i~~   65 (156)
T 1wdc_C            6 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC--------------LGI-----NPRNEDVFAV-GGTHKMGEKSLPF   65 (156)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH--------------TTC-----CCCHHHHHHT-TCCSSTTSCEECH
T ss_pred             HHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHH--------------cCC-----CCCHHHHHHH-HhhCCCCCCeeeH
Confidence            345679999999999  99999999999765322              233     3345578888 9999999999999


Q ss_pred             HHHHHHHHhhhc--cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHh--hccCCC
Q 042392          371 IEFVNLMTDIYK--LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISE--VGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~--~d~~~d  436 (436)
                      +||+.++.....  ....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.  +|.|+|
T Consensus        66 ~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~d  136 (156)
T 1wdc_C           66 EEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLE  136 (156)
T ss_dssp             HHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTT
T ss_pred             HHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCC
Confidence            999998877654  4456789999999999999999999999999999988 99999999999  988875

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.76  E-value=8.1e-19  Score=148.02  Aligned_cols=123  Identities=24%  Similarity=0.396  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHhCCCC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          295 SEYLSKAFQYFDKDN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ...++++|..+|+|+ +|.|+..||..++..              +|     ..++..++..+++.+|.|++|.|+|+||
T Consensus        17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~--------------~~-----~~~~~~~~~~~~~~~D~~~~g~i~~~eF   77 (161)
T 1dtl_A           17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRM--------------LG-----QNPTPEELQEMIDEVDEDGSGTVDFDEF   77 (161)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH--------------TT-----CCCCHHHHHHHHHHHCTTSSSSBCHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH--------------cC-----CCCCHHHHHHHHHHhCCCCCCeEcHHHH
Confidence            445666666666666 666666666443211              12     1223345666666666666666666666


Q ss_pred             HHHHHhhhc----cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYK----LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~----~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++.....    ....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~d  145 (161)
T 1dtl_A           78 LVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND  145 (161)
T ss_dssp             HHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            665554432    1223446666666666666666666666666666555 66666666666665543

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.76  E-value=1.3e-18  Score=145.23  Aligned_cols=126  Identities=33%  Similarity=0.423  Sum_probs=102.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|+.+|.|++|.|+..||..++..              +|.     .++..++..+++.+|.|++|.|+|+
T Consensus         7 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------~~~-----~~~~~~~~~l~~~~d~~~~g~i~~~   67 (153)
T 3ox6_A            7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRT--------------MGY-----MPTEMELIELSQQINMNLGGHVDFD   67 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHH--------------TTC-----CCCHHHHHHHHHHHHTTSTTCCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------cCC-----CCCHHHHHHHHHHhCCCCCccCcHH
Confidence            344567899999999999999999999765322              232     3455678999999999999999999


Q ss_pred             HHHHHHHhhhccCC-----HHHHHHHHHhhccCCCCcccHHHHHHHHHh-CCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKLET-----PELLEKAFQYLDKNSDQFITVNELETAFKE-NNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~~~-----~~~~~~~F~~~D~d~~G~I~~~el~~~l~~-~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++........     .+.++.+|+.+|+|++|+|+.+||+.++.. +|.. ++++++.+++.+|.|+|
T Consensus        68 eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~d  139 (153)
T 3ox6_A           68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGD  139 (153)
T ss_dssp             HHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSS
T ss_pred             HHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCC
Confidence            99998866544332     467899999999999999999999999988 7877 89999999999998875

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.76  E-value=5.8e-18  Score=147.33  Aligned_cols=149  Identities=15%  Similarity=0.194  Sum_probs=128.2

Q ss_pred             CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhh
Q 042392          258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAK  337 (436)
Q Consensus       258 s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~  337 (436)
                      +.+++..+|..+|.|++|.|++.||...+...........+..+|+.+|.|++|.|++.||...+..             
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------------   91 (191)
T 1y1x_A           25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF-------------   91 (191)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------------
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------------
Confidence            3567999999999999999999999999854434456788999999999999999999999654211             


Q ss_pred             hcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC
Q 042392          338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN  417 (436)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~  417 (436)
                                  ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|+||.|+.+||..++..  
T Consensus        92 ------------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~--  157 (191)
T 1y1x_A           92 ------------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF--  157 (191)
T ss_dssp             ------------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH--
T ss_pred             ------------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH--
Confidence                        135889999999999999999999999987766677889999999999999999999999999974  


Q ss_pred             CCChHHHHHHHHhhccCCC
Q 042392          418 MGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       418 ~~~~~e~~~~~~~~d~~~d  436 (436)
                         .+++..+++.+|.|+|
T Consensus       158 ---~~~~~~~F~~~D~d~d  173 (191)
T 1y1x_A          158 ---VCRVRNVFAFYDRERT  173 (191)
T ss_dssp             ---HHHHHHHHHHHCTTCC
T ss_pred             ---HHHHHHHHHHhCcCCC
Confidence               3678899999998875

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.76  E-value=2.5e-18  Score=145.07  Aligned_cols=123  Identities=25%  Similarity=0.433  Sum_probs=62.3

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++++|+.+|.|++|.|+..||..++..              +|.     .++..++..+++.+|.|++|.|+|+||
T Consensus        18 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~--------------~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef   78 (162)
T 1top_A           18 MIAEFKAAFDMFDADGGGDISTKELGTVMRM--------------LGQ-----NPTKEELDAIIEEVDEDGSGTIDFEEF   78 (162)
T ss_dssp             HHHHHHHHHHTTTCSCSSEEEGGGHHHHHHH--------------TTC-----CCCHHHHHHHHHHHCTTSCCEEEHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH--------------cCC-----CCCHHHHHHHHHHHcCCCCCcEeHHHH
Confidence            3445555555555555555555555433111              111     122334555555555555555555555


Q ss_pred             HHHHHhhhccC----CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCC
Q 042392          374 VNLMTDIYKLE----TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDH  435 (436)
Q Consensus       374 ~~~~~~~~~~~----~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~  435 (436)
                      +.++.......    ..+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~  145 (162)
T 1top_A           79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN  145 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence            55544322110    12345555555555555555555555555555544 5555555555555554

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.76  E-value=4.9e-18  Score=152.19  Aligned_cols=220  Identities=17%  Similarity=0.229  Sum_probs=154.0

Q ss_pred             HHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCCCCCChHHHHHHHHHHHhhhhh
Q 042392          128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLK  207 (436)
Q Consensus       128 ~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~  207 (436)
                      +...+..+++..+..+|..|++.+++. +++.            .++|.+.        ....|+.+......       
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------~e~~~~~--------~~~~~~~l~~l~~~-------   58 (229)
T 3dd4_A            7 EMIAVLIVIVLFVKLLEQFGLIEAGLE-DSVE------------DELEMAT--------VRHRPEALELLEAQ-------   58 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCC-----CCHH------------HHHTTSC--------STTHHHHHHHHHHH-------
T ss_pred             hHHhhHHHHHHHHHHHHHHHHhccccc-CCcH------------HHhhhhh--------ccCCHHHHHHHHHh-------
Confidence            456778889999999999999887442 2210            1222221        11134444332211       


Q ss_pred             hHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          208 KLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       208 s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                              ..++++++..+...|..  .+++|.|+.+||..++..+ +...+...+..+|+.+|.|++|.|+|.||+..+
T Consensus        59 --------~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l  128 (229)
T 3dd4_A           59 --------SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGL  128 (229)
T ss_dssp             --------HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHH
T ss_pred             --------cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence                    12355677777888866  5678999999999999985 455677788999999999999999999999998


Q ss_pred             HhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCC
Q 042392          287 IQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       287 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      .........+.++.+|+.+|+|++|+|+.+||..++..+-..   ..    ....+..+...+++++..+|+.+|.|+||
T Consensus       129 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~---~~----~~~~~~~~~~~~~~~~~~~f~~~D~d~dG  201 (229)
T 3dd4_A          129 SILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDM---MG----KCTYPVLKEDAPRQHVETFFQKMDKNKDG  201 (229)
T ss_dssp             HHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHH---CC---------------CCTHHHHHHHHHCSSCSS
T ss_pred             HHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHH---hc----cccCCCcchhhHHHHHHHHHHHhcCCCCC
Confidence            766656667889999999999999999999998764443111   00    00011113334556799999999999999


Q ss_pred             cccHHHHHHHHHhhhccCCHHHHHHHHHhhcc
Q 042392          367 NIDFIEFVNLMTDIYKLETPELLEKAFQYLDK  398 (436)
Q Consensus       367 ~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~  398 (436)
                      .|+|+||+.++..      ...+.++|+.||.
T Consensus       202 ~Is~~EF~~~~~~------~~~~~~~~~~~D~  227 (229)
T 3dd4_A          202 VVTIDEFIESCQK------DENIMRSMQLFEN  227 (229)
T ss_dssp             BCCHHHHHHHHHT------CHHHHHHHHHHTT
T ss_pred             cEeHHHHHHHHHh------CHHHHHHHHhccc
Confidence            9999999998874      3468999999985

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.76  E-value=1.2e-18  Score=143.52  Aligned_cols=132  Identities=17%  Similarity=0.251  Sum_probs=110.1

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh---hccHHHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK---LERSEYLS  299 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~---~~~~~~l~  299 (436)
                      +..++.+|..+|.+++|.|+.+||..+++.++..++..++..++.    +++|.|+|.||+..+.....   ......++
T Consensus         4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~   79 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV   79 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence            345789999999999999999999999999999999999998887    89999999999998765532   23347899


Q ss_pred             HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       300 ~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      .+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|. ++|.|+|+||+.++.
T Consensus        80 ~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           80 KGFQVFDKDATGMIGVGELRYVLTSL-------------------GEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHHH-------------------HSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             HHHHHhCCCCCCcEeHHHHHHHHHHc-------------------CCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence            99999999999999999987653322                   334556688999999999 999999999998775

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.76  E-value=7.6e-18  Score=145.37  Aligned_cols=163  Identities=16%  Similarity=0.201  Sum_probs=127.6

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      .++.+++..+...|..+  +++|.|+..|+..++..++.. ++..++..+|+.+|.|++|.|++.||+..+.........
T Consensus        14 ~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~   91 (183)
T 1s6c_A           14 NFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH   91 (183)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHH
Confidence            45777777777777665  588999999999999998765 789999999999999999999999999988766555667


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCC---chhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN---TKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      +.++.+|+.+|.|++|+|+..||..++..+..          ..|...   .....+++++.++++.+|.|++|.|+|+|
T Consensus        92 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~E  161 (183)
T 1s6c_A           92 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYD----------MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE  161 (183)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH----------HTC-----------CHHHHHHHHHHHCTTCSSEECHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHH----------HhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHH
Confidence            78999999999999999999999766433211          011110   01122346899999999999999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhc
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLD  397 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D  397 (436)
                      |+.++....      .+...|..||
T Consensus       162 f~~~~~~~~------~~~~~l~~~d  180 (183)
T 1s6c_A          162 FLESXQEDD------NIMRSLQLFQ  180 (183)
T ss_dssp             HHHHTTSCC------HHHHHHHHHH
T ss_pred             HHHHHhcCh------HHHHHHHHhh
Confidence            999886432      5778888877

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.76  E-value=1.6e-18  Score=143.69  Aligned_cols=124  Identities=32%  Similarity=0.477  Sum_probs=83.9

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++++|+.+|.|++|.|+..||..++..              +|.     .++..++..+++.+|.|++|.|+|+|
T Consensus         8 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~--------------~~~-----~~~~~~~~~l~~~~d~~~~g~i~~~e   68 (147)
T 4ds7_A            8 EQIAEFKEAFALFDKDNSGSISASELATVMRS--------------LGL-----SPSEAEVADLMNEIDVDGNHAIEFSE   68 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH--------------TTC-----CCCHHHHHHHHHHHCTTSSSEEEHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHHhccCCCCcCcHHH
Confidence            34556777777777777777777777554221              222     23445677777777777777788888


Q ss_pred             HHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++...... ...+.++.+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+++.+| |+|
T Consensus        69 f~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~d  133 (147)
T 4ds7_A           69 FLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGS  133 (147)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSC
T ss_pred             HHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCC
Confidence            77766544321 223557777777788888888888888777777766 7777777777777 654

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.76  E-value=6.5e-18  Score=143.07  Aligned_cols=137  Identities=20%  Similarity=0.316  Sum_probs=94.9

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHH----HhcCCCCCHHHHHHH-----------HHHHcCCCCCcccHHHHHHHH
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGL----TKVGSMLTEFDVKQL-----------MEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l----~~~~~~~s~~~i~~l-----------~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +...++.+|..+|.+++|.|+.+|+..++    +.++..++..++..+           |+.+|.|++|.|+|.||+..+
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            35678999999999999999999999875    456888888877755           688899999999999998776


Q ss_pred             Hhhhhhcc-------HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc
Q 042392          287 IQRQKLER-------SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ  359 (436)
Q Consensus       287 ~~~~~~~~-------~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (436)
                      ........       ...++.+|+.+|+|++|+|+..||..++..+              |       ++++++..+++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~--------------~-------~~~~~~~~~~~~  140 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF--------------G-------VPEDLARQAAAA  140 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHT--------------T-------CCHHHHHHHHHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh--------------C-------CCHHHHHHHHHH
Confidence            54422111       2336677777777777777766665432111              1       233456666666


Q ss_pred             cccCCCCcccHHHHHHHHHh
Q 042392          360 GDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       360 ~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +|.|++|.|+|+||+.++..
T Consensus       141 ~D~d~dg~i~~~ef~~~~~~  160 (166)
T 3akb_A          141 LDTDGDGKVGETEIVPAFAR  160 (166)
T ss_dssp             HCTTCSSBCCHHHHHHHHHH
T ss_pred             hCCCCCCcCcHHHHHHHHHH
Confidence            66666666666666666544

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.76  E-value=3.5e-18  Score=152.10  Aligned_cols=150  Identities=11%  Similarity=0.089  Sum_probs=106.8

Q ss_pred             CCCCHHH---HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          255 SMLTEFD---VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       255 ~~~s~~~---i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      ..++.++   +..+|+.+|.|++|.|+..||...+.......+...+..+|+.+|.|++|.|++.||...+..+      
T Consensus        43 ~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------  116 (220)
T 3sjs_A           43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM------  116 (220)
T ss_dssp             GGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------
T ss_pred             hcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------
Confidence            3455554   4556777788888888888888776555444566778888888888888888888885432111      


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET  411 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~  411 (436)
                                         ..+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+| |+||.|+++||.+
T Consensus       117 -------------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~  176 (220)
T 3sjs_A          117 -------------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIA  176 (220)
T ss_dssp             -------------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHH
T ss_pred             -------------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHH
Confidence                               24777888888888888888888888777666667777888888888 8888888888888


Q ss_pred             HHHhCCCCChHHHHHHHHhh-ccCC
Q 042392          412 AFKENNMGDDATIKEIISEV-GRDH  435 (436)
Q Consensus       412 ~l~~~~~~~~~e~~~~~~~~-d~~~  435 (436)
                      ++..+     ..+..+++.. |.++
T Consensus       177 ~~~~l-----~~~~~~F~~~~D~~~  196 (220)
T 3sjs_A          177 ICAFA-----AQTRSAYQMIFMNPY  196 (220)
T ss_dssp             HHHHH-----HHHHHHHHHHHTSGG
T ss_pred             HHHHH-----HHHHHHHHHhcccCC
Confidence            77643     2466777777 6654

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.76  E-value=3.3e-19  Score=159.49  Aligned_cols=156  Identities=20%  Similarity=0.201  Sum_probs=122.7

Q ss_pred             hhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH-HHHhcCCCCCHHHHHHHHHHH---------cCCCCC
Q 042392          206 LKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA-GLTKVGSMLTEFDVKQLMEAA---------DMDGNG  275 (436)
Q Consensus       206 ~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~-~l~~~~~~~s~~~i~~l~~~~---------d~d~~g  275 (436)
                      .|.-....+...+++++...++.+|..+|.+.+|.|+.+||.. +++.++..++..++..+++.+         |.|++|
T Consensus        33 ~~~~l~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G  112 (226)
T 2lvv_A           33 AWERIRCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVG  112 (226)
T ss_dssp             HHHHHHHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCC
Confidence            3444344455677999999999999999999999999999998 555578777777777777777         999999


Q ss_pred             cccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH
Q 042392          276 AIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK  355 (436)
Q Consensus       276 ~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (436)
                      .|+|.||+..+...........++.+|+.||+|++|+|+..||..++..+..           .|+...       ++..
T Consensus       113 ~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~-----------~g~~~~-------e~~~  174 (226)
T 2lvv_A          113 EEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKE-----------WGVDIT-------DATT  174 (226)
T ss_dssp             CCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHH-----------HTCCCC-------SCHH
T ss_pred             cCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhh-----------cCCCHH-------HHHH
Confidence            9999999996544444445578999999999999999999999766333211           122221       3788


Q ss_pred             HHHccccCCCCcccHHHHHHHHHh
Q 042392          356 LVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       356 ~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +|..+|.|++|.|+|+||+.++..
T Consensus       175 ~~~~~D~d~dG~Is~~EF~~~~~~  198 (226)
T 2lvv_A          175 VFNEIDTNGSGVVTFDEFSCWAVT  198 (226)
T ss_dssp             HHHHHCCSCSSCEEHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999998864

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.75  E-value=4.2e-19  Score=158.03  Aligned_cols=148  Identities=19%  Similarity=0.231  Sum_probs=117.4

Q ss_pred             HHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-cCCCCCHHHHHHHHHHH---------cCCCCCcccHHHH
Q 042392          213 VIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-VGSMLTEFDVKQLMEAA---------DMDGNGAIDYTEF  282 (436)
Q Consensus       213 ~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-~~~~~s~~~i~~l~~~~---------d~d~~g~i~~~EF  282 (436)
                      .+...++++++..++.+|..+|.+++|.|+.+||..++.. ++..++..++..++..+         +.|++|.|+|.||
T Consensus        37 ~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF  116 (219)
T 3cs1_A           37 AIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEF  116 (219)
T ss_dssp             HSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCH
T ss_pred             HhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHH
Confidence            3445678999999999999999999999999999999987 78777767776655533         3488999999999


Q ss_pred             HHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchh-hhhHHHHHHHHHccc
Q 042392          283 TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ-FRAMNMLKKLVLQGD  361 (436)
Q Consensus       283 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d  361 (436)
                      +..+...........++.+|+.||+|++|+|+..||..++..+                   +. .++.+++..+|+.+|
T Consensus       117 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-------------------g~~~~~~~e~~~l~~~~D  177 (219)
T 3cs1_A          117 LEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKL-------------------EAWGAKVEDPAALFKELD  177 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHH-------------------HHHTCCCSCHHHHHHHHC
T ss_pred             HHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------------------cccCCCHHHHHHHHHHhC
Confidence            9886544444456779999999999999999999997653332                   11 223345888999999


Q ss_pred             cCCCCcccHHHHHHHHHh
Q 042392          362 IDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       362 ~~~~g~i~f~EF~~~~~~  379 (436)
                      .|++|.|+|+||+.++..
T Consensus       178 ~d~dG~I~~~EF~~~~~~  195 (219)
T 3cs1_A          178 KNGTGSVTFDEFAAWASA  195 (219)
T ss_dssp             TTSSSEEEHHHHHHHHHH
T ss_pred             CCCCCcEeHHHHHHHHHH
Confidence            999999999999988764

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.75  E-value=4e-18  Score=164.53  Aligned_cols=144  Identities=29%  Similarity=0.542  Sum_probs=123.3

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~  294 (436)
                      ..+++++...++.+|..+|.+.+|.|+.+||..+++.++..++.+++..+++.+|.|++|.|+|+||+..+... .....
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~  383 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS  383 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence            34677888999999999999999999999999999999999999999999999999999999999999988654 33445


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .+.++.+|+.+|+|++|+|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~l-------------------G~~ls~eei~~Lf~~~D~D~DG~IsfdEFv  444 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTNL-------------------GEKLTDEEVDEMIREADIDGDGQVNYEEFV  444 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCTTSSSSEEHHHHH
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            6789999999999999999999997663332                   334556689999999999999999999999


Q ss_pred             HHHH
Q 042392          375 NLMT  378 (436)
Q Consensus       375 ~~~~  378 (436)
                      .++.
T Consensus       445 ~~L~  448 (450)
T 3sg6_A          445 QMMT  448 (450)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            8875

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.75  E-value=2.4e-18  Score=147.88  Aligned_cols=142  Identities=19%  Similarity=0.213  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhh
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKK  338 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~  338 (436)
                      ..++..+|..+|.|++|.|++.||...+...........+..+|+.+|.|++|.|++.||...+...      .      
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~------~------   77 (179)
T 2f2o_A           10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK------M------   77 (179)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------H------
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHH------c------
Confidence            4567888999999999999999999887765555567788999999999999999999996542111      0      


Q ss_pred             cCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC
Q 042392          339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM  418 (436)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~  418 (436)
                            ........+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|++|.|+.+||..++...+.
T Consensus        78 ------~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~  151 (179)
T 2f2o_A           78 ------KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGG  151 (179)
T ss_dssp             ------HHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC---
T ss_pred             ------cCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCC
Confidence                  12234567888999999999999999999998887766677888999999999999999999999999876543

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.75  E-value=3.1e-18  Score=147.82  Aligned_cols=141  Identities=16%  Similarity=0.202  Sum_probs=104.2

Q ss_pred             CChhhHHHHHHHhhhh-CCCCCCccCHHHHHHHHHhcC----CCCCHHHHHHH-----------HHHHcCCCCCcccHHH
Q 042392          218 LPGEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVG----SMLTEFDVKQL-----------MEAADMDGNGAIDYTE  281 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~-D~~~~g~i~~~eL~~~l~~~~----~~~s~~~i~~l-----------~~~~d~d~~g~i~~~E  281 (436)
                      +++++...+..+|..+ |.+++|.|+.+|+..++..++    ..++..++..+           |+.+|.|++|.|+++|
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E   81 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence            3567888999999999 999999999999999999887    78888888765           9999999999999999


Q ss_pred             HHHHHHhhhhh---------ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHH
Q 042392          282 FTAATIQRQKL---------ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM  352 (436)
Q Consensus       282 F~~~~~~~~~~---------~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (436)
                      |+..+......         .....++.+|+.+|+|++|.|+..||..++..              +|+       ++++
T Consensus        82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~--------------~g~-------~~~~  140 (185)
T 2sas_A           82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN--------------FQL-------QCAD  140 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS--------------SCC-------CCSS
T ss_pred             HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH--------------hCC-------CHHH
Confidence            99887544221         12355677777777777777777777544211              121       1224


Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +..+++.+|.|++|.|+|+||+.++..
T Consensus       141 ~~~~~~~~D~d~dG~i~~~ef~~~~~~  167 (185)
T 2sas_A          141 VPAVYNVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             HHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            667777777777777777777766654

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.75  E-value=1.1e-18  Score=153.41  Aligned_cols=141  Identities=22%  Similarity=0.320  Sum_probs=116.1

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh------
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ------  290 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~------  290 (436)
                      .++++++..++.+|..+|.+++|.|+.+||..+ ..++..++   +..+|+.+|.|++|.|+|.||+..+....      
T Consensus        22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~   97 (202)
T 2bec_A           22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED   97 (202)
T ss_dssp             CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence            568899999999999999999999999999998 77776655   89999999999999999999999887654      


Q ss_pred             -----------hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc
Q 042392          291 -----------KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ  359 (436)
Q Consensus       291 -----------~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (436)
                                 .......++.+|+.+|.|++|+|+..||..++..+             .|     ..++++++..+++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~-------------~g-----~~~~~~~~~~~~~~  159 (202)
T 2bec_A           98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM-------------VG-----VQVTEEQLENIADR  159 (202)
T ss_dssp             HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS-------------CC-----SCCCHHHHHHHHHH
T ss_pred             ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-------------cC-----CCCCHHHHHHHHHH
Confidence                       34456789999999999999999999997652211             02     22344566777766


Q ss_pred             ----cccCCCCcccHHHHHHHHHh
Q 042392          360 ----GDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       360 ----~d~~~~g~i~f~EF~~~~~~  379 (436)
                          +|.|++|.|+|+||+.++..
T Consensus       160 ~~~~~D~d~dG~Is~~EF~~~~~~  183 (202)
T 2bec_A          160 TVQEADEDGDGAVSFVEFTKSLEK  183 (202)
T ss_dssp             HHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred             HHHHcCCCCCCcCcHHHHHHHHHH
Confidence                99999999999999987754

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.75  E-value=2.6e-18  Score=146.92  Aligned_cols=138  Identities=19%  Similarity=0.171  Sum_probs=112.4

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC----CCCCHHH-H--------HHHHHHHcCCCCCcccHHHHHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG----SMLTEFD-V--------KQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~----~~~s~~~-i--------~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ++++...++.+|..+|.+++|.|+.+||..+++.++    ..++..+ +        ..+++.+|  ++|.|+|.||+..
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~   78 (174)
T 1q80_A            1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS   78 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence            356788999999999999999999999999999987    8888877 6        35777788  9999999999998


Q ss_pred             HHhhhh-----hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcc
Q 042392          286 TIQRQK-----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG  360 (436)
Q Consensus       286 ~~~~~~-----~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (436)
                      +.....     ......++.+|+.+|+|++|+|+..||..++..+              |+       +++++..+++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~--------------g~-------~~~~~~~~~~~~  137 (174)
T 1q80_A           79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--------------GL-------DKTMAPASFDAI  137 (174)
T ss_dssp             HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH--------------TC-------CGGGHHHHHHHH
T ss_pred             HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc--------------CC-------CHHHHHHHHHHh
Confidence            765543     2234678999999999999999999997653222              22       233688999999


Q ss_pred             ccCCCCcccHHHHHHHHHh
Q 042392          361 DIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       361 d~~~~g~i~f~EF~~~~~~  379 (436)
                      |.|++|.|+|+||+.++..
T Consensus       138 D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A          138 DTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             CTTCSSSBCHHHHHHHHHH
T ss_pred             CCCCCceEeHHHHHHHHHH
Confidence            9999999999999987754

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.75  E-value=5e-18  Score=149.06  Aligned_cols=122  Identities=17%  Similarity=0.229  Sum_probs=102.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|..+|.|++|.|+..||..+ ..+                   +..++   +..+++.+|.|++|.|+|+
T Consensus        25 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~l-------------------g~~~~---~~~l~~~~D~d~dg~i~~~   81 (202)
T 2bec_A           25 QASLLRLHHRFRALDRNKKGYLSRMDLQQI-GAL-------------------AVNPL---GDRIIESFFPDGSQRVDFP   81 (202)
T ss_dssp             HHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHH-------------------HHSTT---HHHHHHTTSCSSCCCCCHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-Hhc-------------------CCCcc---HHHHHHHhCCCCCCcCcHH
Confidence            345667999999999999999999999766 222                   11112   7889999999999999999


Q ss_pred             HHHHHHHhhhc-----------------cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC-ChHHHHHHHHh--
Q 042392          372 EFVNLMTDIYK-----------------LETPELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG-DDATIKEIISE--  430 (436)
Q Consensus       372 EF~~~~~~~~~-----------------~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~-~~~e~~~~~~~--  430 (436)
                      ||+.++.....                 ....+.++.+|+.||+|++|+|+.+||+.++..+ |.. ++++++.+++.  
T Consensus        82 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~  161 (202)
T 2bec_A           82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTV  161 (202)
T ss_dssp             HHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            99998876653                 2234679999999999999999999999999998 887 99999999998  


Q ss_pred             --hccCCC
Q 042392          431 --VGRDHK  436 (436)
Q Consensus       431 --~d~~~d  436 (436)
                        +|.|+|
T Consensus       162 ~~~D~d~d  169 (202)
T 2bec_A          162 QEADEDGD  169 (202)
T ss_dssp             HHHCSSCS
T ss_pred             HHcCCCCC
Confidence              998875

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.75  E-value=4.8e-18  Score=147.84  Aligned_cols=126  Identities=26%  Similarity=0.351  Sum_probs=103.1

Q ss_pred             hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          290 QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       290 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ........++++|+.+|.|++|.|+..||..++.              .+|....      .++..+++.+|.|++|.|+
T Consensus        46 l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~--------------~~g~~~~------~~~~~l~~~~D~d~~g~i~  105 (191)
T 3k21_A           46 SNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLE--------------KDGLKLP------YNFDLLLDQIDSDGSGKID  105 (191)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH--------------HTTCCCC------TTHHHHHHHHCTTCSSSEE
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH--------------HcCCCcH------HHHHHHHHHhCCCCCCeEe
Confidence            3455667899999999999999999999976532              2333322      3588999999999999999


Q ss_pred             HHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC--CCC-Ch---HHHHHHHHhhccCCC
Q 042392          370 FIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN--NMG-DD---ATIKEIISEVGRDHK  436 (436)
Q Consensus       370 f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~--~~~-~~---~e~~~~~~~~d~~~d  436 (436)
                      |+||+.++..... ...+.++.+|+.||+|++|+|+.+||+.++...  +.. ++   ++++++++.+|.|+|
T Consensus       106 ~~EF~~~~~~~~~-~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~d  177 (191)
T 3k21_A          106 YTEFIAAALDRKQ-LSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNND  177 (191)
T ss_dssp             HHHHHHHHSCGGG-CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSS
T ss_pred             HHHHHHHHHhhhh-ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCC
Confidence            9999998865443 556789999999999999999999999999884  334 44   469999999999876

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.75  E-value=4.6e-18  Score=149.37  Aligned_cols=153  Identities=12%  Similarity=0.204  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhc
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF  339 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~  339 (436)
                      .++..+|+.+|.|++|.|++.||...+..........++..+|+.+|.|++|.|++.||..++...              
T Consensus        37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~--------------  102 (204)
T 3e3r_A           37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP--------------  102 (204)
T ss_dssp             ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCC--------------
T ss_pred             HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhh--------------
Confidence            457889999999999999999999988766555667889999999999999999999997652221              


Q ss_pred             CCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh-------hccCCHHHHHHHHHhhcc-CCCCcccHHHHHH
Q 042392          340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI-------YKLETPELLEKAFQYLDK-NSDQFITVNELET  411 (436)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~-------~~~~~~~~~~~~F~~~D~-d~~G~I~~~el~~  411 (436)
                           ......+.+..+|+.+|.|++|.|+++||..++...       ......+.+..+|+.+|. |+||.|+++||..
T Consensus       103 -----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~  177 (204)
T 3e3r_A          103 -----MSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQD  177 (204)
T ss_dssp             -----CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHH
T ss_pred             -----cCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHH
Confidence                 122345679999999999999999999999988743       222345679999999999 9999999999999


Q ss_pred             HHHhCCC-C-ChHHHHHHHHhh
Q 042392          412 AFKENNM-G-DDATIKEIISEV  431 (436)
Q Consensus       412 ~l~~~~~-~-~~~e~~~~~~~~  431 (436)
                      ++..++. . ++++.+.+++.+
T Consensus       178 ~~~~~~~~~~~d~~f~~~~~~~  199 (204)
T 3e3r_A          178 YYSGVSASMNTDEEFVAMMTSA  199 (204)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHH
T ss_pred             HHHHcCccCCChHHHHHHHHHh
Confidence            9988762 2 788888888754

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.75  E-value=4.1e-18  Score=148.04  Aligned_cols=136  Identities=24%  Similarity=0.343  Sum_probs=110.5

Q ss_pred             hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          291 KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       291 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .......++++|+.+|.|++|.|+..||..++..+.....        ......+..++..++..+++.+|.|++|.|+|
T Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~  106 (191)
T 3khe_A           35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKG--------DTVSDLDSSQIEAEVDHILQSVDFDRNGYIEY  106 (191)
T ss_dssp             CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHHHTCTTCSSSEEH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcc--------cccccccchhhHHHHHHHHHHhCCCCCCcCCH
Confidence            4566788999999999999999999999766443311100        00111245667789999999999999999999


Q ss_pred             HHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++.........+.++.+|+.+|+|++|+|+.+||+.++.  +.. ++++++.+++.+|.|+|
T Consensus       107 ~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~d  171 (191)
T 3khe_A          107 SEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNND  171 (191)
T ss_dssp             HHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCC
Confidence            99999887666556678899999999999999999999999998  556 89999999999998875

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.75  E-value=4.7e-18  Score=149.50  Aligned_cols=100  Identities=21%  Similarity=0.298  Sum_probs=67.0

Q ss_pred             hhhHHHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHH
Q 042392          220 GEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL  298 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l  298 (436)
                      .-....+..+|..+|.+ ++|.|+.+||..+++.++.+.+.+++..+|+.+|.|++|.|+|.||+..+.........+.+
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~   97 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   97 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence            34555667777777777 67777777777777777766777777777777777777777777777766544333344455


Q ss_pred             HHHHHHhCCCCCCchhhhhhh
Q 042392          299 SKAFQYFDKDNSGYDEFRAMV  319 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~  319 (436)
                      +.+|+.+|.|++|+|+..||.
T Consensus        98 ~~~F~~~D~d~~G~I~~~E~~  118 (204)
T 1jba_A           98 KWTFKIYDKDRNGCIDRQELL  118 (204)
T ss_dssp             HHHHHHHCSSCSSCBCHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHH
Confidence            556666666666665555554

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.75  E-value=9.1e-18  Score=143.38  Aligned_cols=150  Identities=14%  Similarity=0.144  Sum_probs=127.1

Q ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhh
Q 042392          257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK  335 (436)
Q Consensus       257 ~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~  335 (436)
                      .+..++..+|..+|.|++|.|+..||...+.... .......+..+|+.+|.|++|.|++.||...+..           
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~-----------   72 (172)
T 2znd_A            4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY-----------   72 (172)
T ss_dssp             --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH-----------
T ss_pred             cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-----------
Confidence            3567899999999999999999999998876443 3456678999999999999999999999654211           


Q ss_pred             hhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                                    ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|++|.|+.+||..++..
T Consensus        73 --------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           73 --------------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             --------------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             --------------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence                          135888999999999999999999999987766667889999999999999999999999999874


Q ss_pred             CCCCChHHHHHHHHhhccCCC
Q 042392          416 NNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       416 ~~~~~~~e~~~~~~~~d~~~d  436 (436)
                           .+++..+++.+|.|+|
T Consensus       139 -----~~~~~~~F~~~D~d~d  154 (172)
T 2znd_A          139 -----LQRLTDIFRRYDTDQD  154 (172)
T ss_dssp             -----HHHHHHHHHHHCTTSS
T ss_pred             -----HHHHHHHHHHhCCCCC
Confidence                 3678899999998875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.75  E-value=7.6e-19  Score=146.56  Aligned_cols=124  Identities=17%  Similarity=0.243  Sum_probs=100.3

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC--CCCcccH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID--GNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~f  370 (436)
                      .....++++|+.+|.|++|.|+..||..++.              .+|.     .++..++..+++.+|.|  ++|.|+|
T Consensus         7 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~--------------~~g~-----~~~~~~~~~l~~~~d~~~~~~g~i~~   67 (151)
T 1w7j_B            7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMR--------------ALGQ-----NPTNAEVLKVLGNPKSDELKSRRVDF   67 (151)
T ss_dssp             ----CHHHHHHHHCCSSSSEEESTTHHHHHH--------------HTTC-----CCCHHHHHHHTTCCCHHHHTTCEEEH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--------------HcCC-----CCCHHHHHHHHHHhCcCcCCCCcCcH
Confidence            3456689999999999999999999976532              2233     34456899999999999  9999999


Q ss_pred             HHHHHHHHhhhcc---CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYKL---ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~~---~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++......   ...+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+| |+|
T Consensus        68 ~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~d  136 (151)
T 1w7j_B           68 ETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSN  136 (151)
T ss_dssp             HHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTT
T ss_pred             HHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCC
Confidence            9999988765432   123568899999999999999999999999999988 9999999999999 875

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.74  E-value=3.5e-18  Score=139.11  Aligned_cols=129  Identities=23%  Similarity=0.350  Sum_probs=107.1

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH---hhhhhccHHHHHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI---QRQKLERSEYLSKAF  302 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~---~~~~~~~~~~l~~~F  302 (436)
                      ++.+|..+|.+++|.|+.+|+..++..++..++.+++..+|+.+|.+++|.|++.||+..+.   ..........++.+|
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f   81 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999998874   222223445699999


Q ss_pred             HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          303 QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       303 ~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      +.+|.|++|.|+..||..++..+                   +...    +..+++.+|.|++|.|+|+||+.++
T Consensus        82 ~~~D~d~~G~i~~~e~~~~l~~~-------------------~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           82 KLMDVDGDGKLTKEEVTSFFKKH-------------------GIEK----VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSSSSEEEHHHHHHHHTTT-------------------TCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHCCCCCCccCHHHHHHHHHHh-------------------CHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            99999999999999997653221                   1111    7788888888888899999888765

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.74  E-value=1.7e-18  Score=167.13  Aligned_cols=149  Identities=27%  Similarity=0.411  Sum_probs=118.9

Q ss_pred             HcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhh
Q 042392          269 ADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR  348 (436)
Q Consensus       269 ~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (436)
                      +|.+.+|.+...++.............+.++++|+.+|.|++|.|+..||..++..              ++     ..+
T Consensus       285 iD~de~g~i~~~e~~~~~~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~--------------lg-----~~~  345 (450)
T 3sg6_A          285 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS--------------LG-----QNP  345 (450)
T ss_dssp             ESCCTTSTTTTTCBCCC---CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------TT-----CCC
T ss_pred             CCccccccchhhhhhhhhcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------hC-----CCC
Confidence            57788888888887543333344455678999999999999999999999765322              22     234


Q ss_pred             hHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHH
Q 042392          349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKE  426 (436)
Q Consensus       349 ~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~  426 (436)
                      +.+++..+++.+|.|++|.|+|+||+.++..... ....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.
T Consensus       346 s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~  425 (450)
T 3sg6_A          346 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE  425 (450)
T ss_dssp             CHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             CHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHH
Confidence            5668999999999999999999999998876543 3345789999999999999999999999999999888 9999999


Q ss_pred             HHHhhccCCC
Q 042392          427 IISEVGRDHK  436 (436)
Q Consensus       427 ~~~~~d~~~d  436 (436)
                      |++.+|.|+|
T Consensus       426 Lf~~~D~D~D  435 (450)
T 3sg6_A          426 MIREADIDGD  435 (450)
T ss_dssp             HHHHHCTTSS
T ss_pred             HHHHhCCCCC
Confidence            9999998875

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.74  E-value=1.2e-17  Score=144.95  Aligned_cols=161  Identities=20%  Similarity=0.218  Sum_probs=126.8

Q ss_pred             HHHHHhhhhCCC-CCCccCHHHHHHHHHhcCC-CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHH
Q 042392          225 ALKEKFIEMDTD-KNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAF  302 (436)
Q Consensus       225 ~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F  302 (436)
                      .+..+|..+|.+ ++|.|+.+|+..++..++. ..+..++..+|+.+|.|++|.|++.||...+.........+.++.+|
T Consensus        26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 2l2e_A           26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAF  105 (190)
T ss_dssp             HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            466778889988 7999999999999999864 35677899999999999999999999999887665556678899999


Q ss_pred             HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc
Q 042392          303 QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK  382 (436)
Q Consensus       303 ~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~  382 (436)
                      +.+|.|++|+|+..||..++..+..+   ++.   ...++ .....+++++.++|+.+|.|++|.|+|+||+.++.... 
T Consensus       106 ~~~D~d~~G~i~~~e~~~~~~~~~~~---~g~---~~~~~-~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~-  177 (190)
T 2l2e_A          106 QLYDLDNNGLISYDEMLRIVDAIYKM---VGS---MVKLP-EDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP-  177 (190)
T ss_dssp             HHHCTTSCSCBCHHHHHHHHHHHHHH---HHH---HSCCC-SSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT-
T ss_pred             hHccCCCCCcCcHHHHHHHHHHHHHH---hcc---ccCcc-cccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc-
Confidence            99999999999999997764332110   000   00011 12234566899999999999999999999999887532 


Q ss_pred             cCCHHHHHHHHHhhcc
Q 042392          383 LETPELLEKAFQYLDK  398 (436)
Q Consensus       383 ~~~~~~~~~~F~~~D~  398 (436)
                           .+...|..||.
T Consensus       178 -----~~~~~l~~~d~  188 (190)
T 2l2e_A          178 -----TIVSALSLYDG  188 (190)
T ss_dssp             -----HHHHHHHTTCS
T ss_pred             -----HHHHHHHHHhc
Confidence                 57788888874

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.74  E-value=6.8e-18  Score=147.13  Aligned_cols=136  Identities=15%  Similarity=0.223  Sum_probs=99.4

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|+.+|+|++|.|+..||...+..         ..++.+|............+..+++.+|.|++|.|+|+
T Consensus        16 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~---------~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~   86 (195)
T 1qv0_A           16 PRWIKRHKHMFDFLDINGNGKITLDEIVSKASD---------DICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFP   86 (195)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH---------THHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHH
T ss_pred             HHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHH---------HHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHH
Confidence            445667999999999999999999999621100         01233344332222223368999999999999999999


Q ss_pred             HHHHHHHhhhc-------cCCHHHHH----HHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYK-------LETPELLE----KAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~-------~~~~~~~~----~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++.....       ....+.++    .+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        87 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~d  163 (195)
T 1qv0_A           87 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNA  163 (195)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            99998765432       11112344    99999999999999999999999999887 99999999999998875

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.74  E-value=8.4e-18  Score=139.65  Aligned_cols=123  Identities=15%  Similarity=0.242  Sum_probs=102.4

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcc---ccCCCCccc
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG---DIDGNGNID  369 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~~g~i~  369 (436)
                      .....++++|+.+|+|++|.|+..||..++..              +|.     .++..++..+++.+   |.|+ |.|+
T Consensus         5 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~--------------~~~-----~~~~~~~~~l~~~~~~~d~~~-g~i~   64 (149)
T 2mys_C            5 AAADDFKEAFLLFDRTGDAKITASQVGDIARA--------------LGQ-----NPTNAEINKILGNPSKEEMNA-AAIT   64 (149)
T ss_pred             HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHHhhhccccC-CcCc
Confidence            34567899999999999999999999765322              232     34556799999999   9999 9999


Q ss_pred             HHHHHHHHHhhh---ccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          370 FIEFVNLMTDIY---KLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       370 f~EF~~~~~~~~---~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+||+.++....   .....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++. |.|+|
T Consensus        65 ~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~d  134 (149)
T 2mys_C           65 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSN  134 (149)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCC
Confidence            999999887652   22345779999999999999999999999999999887 99999999999 98875

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.74  E-value=3.6e-18  Score=149.44  Aligned_cols=94  Identities=21%  Similarity=0.268  Sum_probs=53.2

Q ss_pred             HHHHhhhhCCC-CCCccCHHHHHHHHHhcCCCCCH-HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHH
Q 042392          226 LKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQ  303 (436)
Q Consensus       226 l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~~s~-~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~  303 (436)
                      +..+|..+|.+ ++|.|+..||..+++.++..++. +++..+|+.+|.|++|.|+|.||+..+.........+.++.+|+
T Consensus        16 l~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~   95 (198)
T 2r2i_A           16 CHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFK   95 (198)
T ss_dssp             HHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHH
Confidence            45555556555 56666666666666665544433 33666666666666666666666665544333333445555555


Q ss_pred             HhCCCCCCchhhhhhh
Q 042392          304 YFDKDNSGYDEFRAMV  319 (436)
Q Consensus       304 ~~D~~~~G~i~~~el~  319 (436)
                      .+|.|++|+|+..||.
T Consensus        96 ~~D~d~~G~I~~~Ef~  111 (198)
T 2r2i_A           96 LYDVDGNGCIDRGELL  111 (198)
T ss_dssp             HHCTTCSSCEEHHHHH
T ss_pred             HhcCCCCCcCcHHHHH
Confidence            5555555555555554

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.74  E-value=5.4e-18  Score=140.20  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=97.6

Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      +++++|+.+|.|++|.|+..||..++..              +|.     .++..++..++..   |++|.|+|+||+.+
T Consensus         6 el~~~F~~~D~d~~G~i~~~e~~~~l~~--------------~~~-----~~~~~~~~~~~~~---~~~g~i~~~eF~~~   63 (145)
T 2bl0_B            6 QIQECFQIFDKDNDGKVSIEELGSALRS--------------LGK-----NPTNAELNTIKGQ---LNAKEFDLATFKTV   63 (145)
T ss_dssp             HHHHHHHHHCTTCSSCEEGGGHHHHHHH--------------TTC-----CCCHHHHHHHHHH---HTSSEECHHHHHHH
T ss_pred             HHHHHHHHhCCCCcCccCHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHh---cCCCeEcHHHHHHH
Confidence            3899999999999999999999765322              233     3345578888877   88999999999998


Q ss_pred             HHhhh--ccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          377 MTDIY--KLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       377 ~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +....  .....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|.|+|
T Consensus        64 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~d  126 (145)
T 2bl0_B           64 YRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGD  126 (145)
T ss_dssp             HTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTT
T ss_pred             HHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCC
Confidence            87653  23345779999999999999999999999999999887 99999999999998875

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.74  E-value=1.7e-17  Score=145.91  Aligned_cols=67  Identities=15%  Similarity=0.204  Sum_probs=44.7

Q ss_pred             CCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCc
Q 042392          256 MLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESP  322 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~  322 (436)
                      .++.+++..+|+.+|.+ ++|.|++.||..++...........+..+|+.+|.|++|.|++.||..++
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~   85 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAAL   85 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHH
Confidence            35566677777777777 67777777777666544334455566777777777777777777776554

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.74  E-value=5.1e-18  Score=147.35  Aligned_cols=136  Identities=14%  Similarity=0.193  Sum_probs=102.5

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .....+++++|+.+|+|++|.|+..||...+..         ..++.+|............+..+++.+|.|++|.|+|+
T Consensus        12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~---------~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~   82 (191)
T 1uhk_A           12 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASD---------IVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWP   82 (191)
T ss_dssp             HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH---------HHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHH
T ss_pred             HHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHH---------HHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHH
Confidence            345567999999999999999999999621000         01223333322221122268999999999999999999


Q ss_pred             HHHHHHHhhhc-------cCCHHHHH----HHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYK-------LETPELLE----KAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~-------~~~~~~~~----~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++.....       ....+.++    .+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        83 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~d  159 (191)
T 1uhk_A           83 AYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES  159 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            99998765432       11122344    99999999999999999999999999887 99999999999998875

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.74  E-value=2.7e-18  Score=141.77  Aligned_cols=121  Identities=17%  Similarity=0.357  Sum_probs=100.5

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++++|+.+|+|++|.|+..||..++..              +|.     .++..++..++..    ++|.|+|+|
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------~g~-----~~~~~~~~~~~~~----~~g~i~~~e   60 (143)
T 3j04_B            4 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS--------------MGK-----NPTDEYLEGMMSE----APGPINFTM   60 (143)
T ss_dssp             HHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHH--------------TSC-----CCCHHHHHTTTTT----SSSCCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHh----CCCCcCHHH
Confidence            34567999999999999999999999765322              233     3445567777665    799999999


Q ss_pred             HHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++..... ....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus        61 F~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~d  126 (143)
T 3j04_B           61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKK  126 (143)
T ss_dssp             HHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCC
Confidence            9998876543 3456789999999999999999999999999999988 99999999999998875

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.73  E-value=1.2e-17  Score=143.46  Aligned_cols=151  Identities=13%  Similarity=0.100  Sum_probs=116.7

Q ss_pred             HHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHc---CCCCCcccHHHHHHHHH
Q 042392          211 VKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD---MDGNGAIDYTEFTAATI  287 (436)
Q Consensus       211 ~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d---~d~~g~i~~~EF~~~~~  287 (436)
                      +..++...+..++..+...|..+|  ++|.|+.+||..++   |..++...+..+|+.++   .+++|.|++.||+..+.
T Consensus        15 l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~   89 (179)
T 3a8r_A           15 LQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYE   89 (179)
T ss_dssp             HHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHH
T ss_pred             HHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHH
Confidence            334455545567888999999999  79999999999864   66788888999999887   46788999999998765


Q ss_pred             hhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcc-hhhhHHHHhhhhhhhcCCC-C-chhhhhHHHHHHHHHccccCC
Q 042392          288 QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQ-TIRNVSHIYTDKAKKFGLG-N-TKQFRAMNMLKKLVLQGDIDG  364 (436)
Q Consensus       288 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~~  364 (436)
                      ........+.++.+|+.||+|++|+|+..||..++. .+              |.. . .....+++++.++++.+|.|+
T Consensus        90 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~--------------g~~~~~~~~~~~~~~~~~~~~~~D~d~  155 (179)
T 3a8r_A           90 QLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSA--------------SANKLSKIKERADEYTALIMEELDPTN  155 (179)
T ss_dssp             HHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH--------------HTTHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred             HHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHh--------------ccccccccccchHHHHHHHHHHhCCCC
Confidence            544345677899999999999999999999976633 21              111 0 001126678999999999999


Q ss_pred             CCcccHHHHHHHHHhh
Q 042392          365 NGNIDFIEFVNLMTDI  380 (436)
Q Consensus       365 ~g~i~f~EF~~~~~~~  380 (436)
                      +|.|+|+||+.++...
T Consensus       156 dG~I~~~EF~~~~~~~  171 (179)
T 3a8r_A          156 LGYIEMEDLEALLLQS  171 (179)
T ss_dssp             CSEECHHHHHHHHC--
T ss_pred             CCcCcHHHHHHHHHhC
Confidence            9999999999988653

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.73  E-value=2.3e-17  Score=150.39  Aligned_cols=157  Identities=22%  Similarity=0.262  Sum_probs=124.9

Q ss_pred             CccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchhhh
Q 042392          239 GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDEFR  316 (436)
Q Consensus       239 g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~  316 (436)
                      +.++.+++.......+  ++.+++..+|+.+|.+ ++|.|++.||...+.... .......+..+|+.+|.|++|.|++.
T Consensus        72 ~~l~~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~  149 (256)
T 2jul_A           72 VRHQPEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFE  149 (256)
T ss_dssp             ----CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSH
T ss_pred             ccCCHHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHH
Confidence            4466777887776654  8999999999999876 799999999999876552 34456789999999999999999999


Q ss_pred             hhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh------------ccC
Q 042392          317 AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY------------KLE  384 (436)
Q Consensus       317 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~------------~~~  384 (436)
                      ||..++..+                   +...+++++..+|+.+|.|++|.|+++||..++....            ...
T Consensus       150 Ef~~~l~~~-------------------~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~  210 (256)
T 2jul_A          150 DFVVGLSIL-------------------LRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDA  210 (256)
T ss_dssp             HHHHHHHHH-------------------HSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCC
T ss_pred             HHHHHHHHH-------------------hccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhh
Confidence            997653332                   1223456799999999999999999999999887652            112


Q ss_pred             CHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          385 TPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       385 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      ..+.+..+|+.+|.|+||.|+.+||..++...
T Consensus       211 ~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~  242 (256)
T 2jul_A          211 PLEHVERFFQKMDRNQDGVVTIDEFLETCQKD  242 (256)
T ss_dssp             HHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhC
Confidence            45779999999999999999999999999853

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.73  E-value=8.9e-18  Score=144.65  Aligned_cols=121  Identities=20%  Similarity=0.328  Sum_probs=99.9

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|+.+|+|++|.|+..||..++.              .+|+.       ..++..+++.+|.|++|.|+|+
T Consensus        35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~--------------~~g~~-------~~~~~~~~~~~D~d~~g~i~~~   93 (180)
T 3mse_B           35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLA--------------SVGIK-------KWDINRILQALDINDRGNITYT   93 (180)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH--------------HTTCC-------HHHHHHHHHHHCTTCCSEECHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH--------------HcCCC-------HHHHHHHHHHhCCCCCCcCcHH
Confidence            45567899999999999999999999976532              22332       2469999999999999999999


Q ss_pred             HHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++..... ...+.++.+|+.||+|++|+||.+||+.++.  +.+ ++++++++++.+|.|+|
T Consensus        94 Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d  156 (180)
T 3mse_B           94 EFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKK  156 (180)
T ss_dssp             HHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC--
T ss_pred             HHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccC
Confidence            99998875443 2246799999999999999999999999998  445 89999999999998864

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.73  E-value=1.1e-17  Score=143.27  Aligned_cols=133  Identities=18%  Similarity=0.227  Sum_probs=103.1

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhh------HHHHHHHHHccccCCCC
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA------MNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~g  366 (436)
                      .....++++|+.+|.|++|.|+..||..++..          .++.+|.........      ...+..+++.+|.|++|
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~----------~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg   73 (176)
T 1nya_A            4 IASDRLKKRFDRWDFDGNGALERADFEKEAQH----------IAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDG   73 (176)
T ss_dssp             HHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHH----------HHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHH----------HHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            34567999999999999999999999753111          123334433322111      11233889999999999


Q ss_pred             cccHHHHHHHHHhhhccCCH--------HHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          367 NIDFIEFVNLMTDIYKLETP--------ELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       367 ~i~f~EF~~~~~~~~~~~~~--------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      .|+|+||+.++.........        +.++.+|+.||+|++|+|+.+||+.++..+| .++++++.+++.+|.|+|
T Consensus        74 ~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~d  150 (176)
T 1nya_A           74 SLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAAEAFNQVDTNGN  150 (176)
T ss_dssp             CBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCS
T ss_pred             eEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCC
Confidence            99999999988776544432        5699999999999999999999999999987 689999999999999875

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.73  E-value=2.8e-17  Score=147.25  Aligned_cols=166  Identities=20%  Similarity=0.256  Sum_probs=129.4

Q ss_pred             cCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhh-hhhccHHHHHHHHHHhCCCCCCchhhhhh
Q 042392          241 LSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQR-QKLERSEYLSKAFQYFDKDNSGYDEFRAM  318 (436)
Q Consensus       241 i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~~el  318 (436)
                      ++.+++.......  .++.+++..+++.+ +.+++|.|+..||...+... ........+..+|+.+|.|++|.|++.||
T Consensus        47 ~~~~~l~~l~~~~--~~s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef  124 (229)
T 3dd4_A           47 HRPEALELLEAQS--KFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDF  124 (229)
T ss_dssp             THHHHHHHHHHHH--HHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHH
T ss_pred             CCHHHHHHHHHhc--CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHH
Confidence            4456666554443  47888899998888 67899999999999887654 23345567889999999999999999999


Q ss_pred             hcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh------------ccCCH
Q 042392          319 VESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY------------KLETP  386 (436)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~------------~~~~~  386 (436)
                      ..++..+                   .....++.+..+|+.+|.|++|.|+++||..++....            .....
T Consensus       125 ~~~l~~~-------------------~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~  185 (229)
T 3dd4_A          125 IKGLSIL-------------------LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPR  185 (229)
T ss_dssp             HHHHHHH-------------------HHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CC
T ss_pred             HHHHHHH-------------------cCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHH
Confidence            7653222                   1223456799999999999999999999999987652            22344


Q ss_pred             HHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhc
Q 042392          387 ELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVG  432 (436)
Q Consensus       387 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d  432 (436)
                      +.+..+|+.+|+|+||.||.+||..++..     ..++..+++..|
T Consensus       186 ~~~~~~f~~~D~d~dG~Is~~EF~~~~~~-----~~~~~~~~~~~D  226 (229)
T 3dd4_A          186 QHVETFFQKMDKNKDGVVTIDEFIESCQK-----DENIMRSMQLFE  226 (229)
T ss_dssp             THHHHHHHHHCSSCSSBCCHHHHHHHHHT-----CHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCcEeHHHHHHHHHh-----CHHHHHHHHhcc
Confidence            67999999999999999999999999983     456777777766

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.73  E-value=1.4e-18  Score=150.89  Aligned_cols=122  Identities=32%  Similarity=0.504  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...++++|..+|.|++|.|+..||..++..              +     +..+++.++..+++.+|.|++|.|+|+||+
T Consensus         9 ~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~--------------~-----g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~   69 (188)
T 1s6i_A            9 IGGLKELFKMIDTDNSGTITFDELKDGLKR--------------V-----GSELMESEIKDLMDAADIDKSGTIDYGEFI   69 (188)
T ss_dssp             TCSHHHHHHTTSSSSSSCEEHHHHHHHHTT--------------T-----TCCCCHHHHHHHHHHTCTTCSSEECHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHH--------------c-----CCCCCHHHHHHHHHHcCCCCCCeEeHHHHH
Confidence            445778888888888888888777654222              1     223344567788888888888888888888


Q ss_pred             HHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          375 NLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      .++.........+.++.+|+.||+|++|+|+.+||+.++..+|. ++++++.+++.+|.|+|
T Consensus        70 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-~~~~~~~~~~~~D~d~d  130 (188)
T 1s6i_A           70 AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDND  130 (188)
T ss_dssp             HHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSS
T ss_pred             HHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCC
Confidence            77765443333345788888888888888888888888776653 56678888888877764

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.73  E-value=4.5e-18  Score=150.46  Aligned_cols=166  Identities=17%  Similarity=0.215  Sum_probs=125.5

Q ss_pred             HHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCCCCCH-HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          224 QALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       224 ~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~~s~-~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      ..+..+|..+|.+ ++|.|+.+||..+++.++..++. +++..+|+.+|.|++|.|+|.||+..+.........+.++.+
T Consensus        19 ~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~   98 (211)
T 2ggz_A           19 QETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY   98 (211)
T ss_dssp             -----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHH
Confidence            3467889999987 89999999999999988866544 559999999999999999999999988765545567789999


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhh-hHHHHHHHHHccccCCCCcccHHHHHHHHHhh
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR-AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                      |+.+|.|++|+|+..||..++..+..             .... ... .++.+..+|+.+|.|++|.|+|+||+.++...
T Consensus        99 F~~~D~d~~G~I~~~E~~~~l~~~~~-------------~~~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  164 (211)
T 2ggz_A           99 FKLYDADGNGSIDKNELLDMFMAVQA-------------LNGQ-QTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKD  164 (211)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHHHTT-------------SSCC-CSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHHHHh-------------hcCC-ccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC
Confidence            99999999999999999765333200             0000 111 23458999999999999999999999988742


Q ss_pred             hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          381 YKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       381 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                            +++..+|+.       .++++||..++...
T Consensus       165 ------~~~~~~~~~-------~~d~~~f~~~~~~~  187 (211)
T 2ggz_A          165 ------QDLLEIVYK-------SFDFSNVLRVICNG  187 (211)
T ss_dssp             ------TTTHHHHHH-------HSCTTHHHHHHHHH
T ss_pred             ------HHHHHHHhc-------cCCHHHHHHHHhcC
Confidence                  245666662       23377888888753

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.73  E-value=2.7e-18  Score=151.86  Aligned_cols=150  Identities=21%  Similarity=0.328  Sum_probs=112.0

Q ss_pred             CCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhh-hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          256 MLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      .++.+++..+|+.+|.+ ++|.|++.||..++..... ......+..+|+.+|.|++|.|++.||..++..+        
T Consensus        15 ~ls~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~--------   86 (211)
T 2ggz_A           15 AVPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLI--------   86 (211)
T ss_dssp             ---------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH--------
T ss_pred             CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh--------
Confidence            46788899999999988 8999999999988754322 2334569999999999999999999997653222        


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh-----ccCCH-HHHHHHHHhhccCCCCcccHH
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY-----KLETP-ELLEKAFQYLDKNSDQFITVN  407 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~-----~~~~~-~~~~~~F~~~D~d~~G~I~~~  407 (436)
                                 ....+++.+..+|+.+|.|++|.|+++||..++....     ..... +.++.+|+.+|.|+||.|+.+
T Consensus        87 -----------~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~  155 (211)
T 2ggz_A           87 -----------MQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLE  155 (211)
T ss_dssp             -----------SCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             -----------ccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHH
Confidence                       1123456799999999999999999999999988764     33344 458999999999999999999


Q ss_pred             HHHHHHHhCCCCChHHHHHHHH
Q 042392          408 ELETAFKENNMGDDATIKEIIS  429 (436)
Q Consensus       408 el~~~l~~~~~~~~~e~~~~~~  429 (436)
                      ||..++..     .+++.+++.
T Consensus       156 Ef~~~~~~-----~~~~~~~~~  172 (211)
T 2ggz_A          156 EFINGMAK-----DQDLLEIVY  172 (211)
T ss_dssp             HHHHHHHT-----TTTTHHHHH
T ss_pred             HHHHHHHh-----CHHHHHHHh
Confidence            99999984     334555555

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.73  E-value=2.5e-17  Score=142.11  Aligned_cols=145  Identities=14%  Similarity=0.225  Sum_probs=114.9

Q ss_pred             cCChhhHHHHHHHhhhhCC-----CC-C--CccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCc-ccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDT-----DK-N--GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA-IDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~-----~~-~--g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~-i~~~EF~~~~~  287 (436)
                      .++++++..+..+|..+|.     ++ +  |.|+..||.. ++.++..++..   .+++.+|.+++|. |+|.||+..+.
T Consensus        13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~~   88 (183)
T 1dgu_A           13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLS   88 (183)
T ss_dssp             SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHHH
Confidence            3578889999999999999     67 8  9999999999 88899887754   5788899999999 99999999887


Q ss_pred             hhhhh-ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHH----HHHcccc
Q 042392          288 QRQKL-ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK----LVLQGDI  362 (436)
Q Consensus       288 ~~~~~-~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~  362 (436)
                      ..... .....++.+|+.||+|++|+|+..||..++..+              +.......++++++..    +++.+|.
T Consensus        89 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~D~  154 (183)
T 1dgu_A           89 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCL--------------TGEGEDTRLSASEMKQLIDNILEESDI  154 (183)
T ss_dssp             HHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH--------------HSSSCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH--------------hcccccCCCCHHHHHHHHHHHHHHhCC
Confidence            65433 334689999999999999999999997653332              1100012345555654    8889999


Q ss_pred             CCCCcccHHHHHHHHHh
Q 042392          363 DGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       363 ~~~g~i~f~EF~~~~~~  379 (436)
                      |++|.|+|+||+.++..
T Consensus       155 d~dG~I~~~EF~~~~~~  171 (183)
T 1dgu_A          155 DRDGTINLSEFQHVISR  171 (183)
T ss_dssp             TSSSEEEHHHHHHHHCS
T ss_pred             CCCCeEcHHHHHHHHHh
Confidence            99999999999988764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.73  E-value=1.4e-17  Score=146.82  Aligned_cols=171  Identities=13%  Similarity=0.133  Sum_probs=130.2

Q ss_pred             HHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          224 QALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       224 ~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      ..+..+|..+|.+ ++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|++.||+..+.........+.++.+
T Consensus        33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~  112 (207)
T 2d8n_A           33 EELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWA  112 (207)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence            3456667777777 69999999999999998764 788999999999999999999999999988765544556679999


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      |+.+|.|++|+|+..||..++..+..+   ++.. ....++. .+...++++..+|+.+|.|++|.|+|+||+.++... 
T Consensus       113 f~~~D~d~~G~I~~~E~~~~l~~~~~~---~g~~-~~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-  186 (207)
T 2d8n_A          113 FSLYDVDGNGTISKNEVLEIVMAIFKM---ITPE-DVKLLPD-DENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN-  186 (207)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHHHHH---SCHH-HHHTSCT-TTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC-
T ss_pred             HHHhcCCCCCeEcHHHHHHHHHHHHHH---hccc-cCCCccc-ccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC-
Confidence            999999999999999997664332110   0000 0000111 111334679999999999999999999999988742 


Q ss_pred             ccCCHHHHHHHHHhhccCCCCccc
Q 042392          382 KLETPELLEKAFQYLDKNSDQFIT  405 (436)
Q Consensus       382 ~~~~~~~~~~~F~~~D~d~~G~I~  405 (436)
                           ..+...|..||..-.+.++
T Consensus       187 -----~~~~~~~~~~~~~~~~~~~  205 (207)
T 2d8n_A          187 -----KEILRLIQFEPQKVKEKMK  205 (207)
T ss_dssp             -----HHHHHHHSCCCSSCCCCC-
T ss_pred             -----hHHHHHHhhhhHHHHHHhc
Confidence                 3588889999887777765

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.72  E-value=7.2e-18  Score=142.97  Aligned_cols=132  Identities=20%  Similarity=0.256  Sum_probs=73.4

Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCC
Q 042392          262 VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGL  341 (436)
Q Consensus       262 i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~  341 (436)
                      +..+|..+|.|++|.|++.||...+...........+..+|+.+|.|++|.|++.||...+...                
T Consensus        29 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~----------------   92 (166)
T 2aao_A           29 LKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHL----------------   92 (166)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTC----------------
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH----------------
Confidence            4456666666666666666666655544333344556666666666666666666664331111                


Q ss_pred             CCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          342 GNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                         ......+.+..+|+.+|.|++|.|+.+||..++....  .+++++..+|+.+|.|++|.|+.+||..++.
T Consensus        93 ---~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  160 (166)
T 2aao_A           93 ---NKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQ  160 (166)
T ss_dssp             ---HHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHHHHHHHHC
T ss_pred             ---hhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence               1112334566666666666666666666666655432  2344566666666666666666666666654

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.72  E-value=7.6e-17  Score=143.86  Aligned_cols=164  Identities=16%  Similarity=0.208  Sum_probs=128.2

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      .++.+++..+...|...  +++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|.||+..+.........
T Consensus        47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~  124 (224)
T 1s1e_A           47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH  124 (224)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence            36777777776666654  478999999999999998754 789999999999999999999999999988766555567


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC---CchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG---NTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      +.++.+|+.+|.|++|+|+..||..++..+.+.          .|..   ......+.+++.++|+.+|.|+||.|+|+|
T Consensus       125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~----------~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~E  194 (224)
T 1s1e_A          125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDM----------MGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE  194 (224)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHH----------HTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHH----------hcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHH
Confidence            789999999999999999999997664332110          1111   011122456899999999999999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhcc
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDK  398 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~  398 (436)
                      |+.++...      ..+...|..++.
T Consensus       195 F~~~~~~~------~~l~~~l~~~~~  214 (224)
T 1s1e_A          195 FLESCQED------DNIMRSLQLFQN  214 (224)
T ss_dssp             HHHHHHTC------HHHHHHHHHHHH
T ss_pred             HHHHHHhC------HHHHHHhcCCCC
Confidence            99988742      257777877654

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.72  E-value=3e-19  Score=159.06  Aligned_cols=146  Identities=14%  Similarity=0.245  Sum_probs=108.0

Q ss_pred             CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHH
Q 042392          273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM  352 (436)
Q Consensus       273 ~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (436)
                      +++.+++.++...+...........++++|+.+|.|++|.|+..||..++...             +|..     ++..+
T Consensus        25 ~~~~~~~~~l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~-------------lg~~-----~~~~~   86 (219)
T 3cs1_A           25 KDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEV-------------LKLD-----EFTSR   86 (219)
T ss_dssp             HHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHT-------------TCGG-----GTCSC
T ss_pred             HhHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------------hCCC-----ccHHH
Confidence            34567777777665554555667789999999999999999999997553221             1221     12223


Q ss_pred             HHHHHHcc---------ccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC-C-Ch
Q 042392          353 LKKLVLQG---------DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM-G-DD  421 (436)
Q Consensus       353 ~~~~~~~~---------d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~-~~  421 (436)
                      +..++..+         +.|++|.|+|+||+.++.........+.++.+|+.||+|++|+|+.+||+.+|..+|. . ++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~  166 (219)
T 3cs1_A           87 VRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKV  166 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCH
Confidence            33333321         3488999999999987654433223567999999999999999999999999998876 5 88


Q ss_pred             HHHHHHHHhhccCCC
Q 042392          422 ATIKEIISEVGRDHK  436 (436)
Q Consensus       422 ~e~~~~~~~~d~~~d  436 (436)
                      ++++.+++.+|.|+|
T Consensus       167 ~e~~~l~~~~D~d~d  181 (219)
T 3cs1_A          167 EDPAALFKELDKNGT  181 (219)
T ss_dssp             SCHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHhCCCCC
Confidence            889999999998875

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.72  E-value=1.6e-17  Score=146.56  Aligned_cols=123  Identities=19%  Similarity=0.232  Sum_probs=100.1

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchh--hhhHHHHHHHH-------HccccCC
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ--FRAMNMLKKLV-------LQGDIDG  364 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~d~~~  364 (436)
                      ....++++|+.+|+|++|.|+..||..++..+                   +.  .++.+++..++       +.+|.|+
T Consensus        34 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-------------------~~~~~~~~~~~~~l~~~~~~lf~~~D~d~   94 (208)
T 2hpk_A           34 MLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRM-------------------RQLVNATDEQVEKMRDAVRVFFLHKGVEP   94 (208)
T ss_dssp             --CHHHHHHHHHCTTCSSEECHHHHTHHHHHH-------------------HHHSCCCHHHHHHHHHHHHHHHHHTTCBT
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-------------------HhhcCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence            34579999999999999999999997664333                   22  34556788888       9999999


Q ss_pred             CCcccHHHHHHHHH---------hhhcc-CCHHH-HHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhcc
Q 042392          365 NGNIDFIEFVNLMT---------DIYKL-ETPEL-LEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGR  433 (436)
Q Consensus       365 ~g~i~f~EF~~~~~---------~~~~~-~~~~~-~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~  433 (436)
                      +|.|+|+||+.++.         ..... ...++ ++.+|+.||+|++|+|+.+||+.++..+| .++++++.+++.+|.
T Consensus        95 dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-~~~~~~~~~~~~~D~  173 (208)
T 2hpk_A           95 VNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-VPQEAAYTFFEKADT  173 (208)
T ss_dssp             TTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-SCTTHHHHHHHHHCT
T ss_pred             CCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-cCHHHHHHHHHHhCC
Confidence            99999999999876         22222 22334 79999999999999999999999999988 578899999999999


Q ss_pred             CCC
Q 042392          434 DHK  436 (436)
Q Consensus       434 ~~d  436 (436)
                      |+|
T Consensus       174 d~d  176 (208)
T 2hpk_A          174 DKS  176 (208)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            876

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.72  E-value=3.8e-17  Score=138.59  Aligned_cols=121  Identities=19%  Similarity=0.269  Sum_probs=80.3

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|..+|.|++|.|+..||..++..+              |..    .++..++..++...    +|.|+|+||
T Consensus        23 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~--------------g~~----~~~~~~~~~l~~~~----dg~i~~~eF   80 (166)
T 2mys_B           23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAM--------------GRL----NVKNEELDAMIKEA----SGPINFTVF   80 (166)
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh--------------CCC----CCCHHHHHHHHHHC----CCCcCHHHH
Confidence            34567777777777777777777776542222              220    33444666666653    677777777


Q ss_pred             HHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++..... ....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|.|+|
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~d  145 (166)
T 2mys_B           81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVA  145 (166)
T ss_pred             HHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCC
Confidence            776665432 2244567777777777777777777777777777766 77777777777777654

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.72  E-value=2.6e-17  Score=142.81  Aligned_cols=158  Identities=17%  Similarity=0.210  Sum_probs=122.7

Q ss_pred             HHHHHHhhhhCCC-CCCccCHHHHHHHHHhc-CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          224 QALKEKFIEMDTD-KNGTLSYDELRAGLTKV-GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       224 ~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~-~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      ..+..+|..+|.+ ++|.|+.+|+..++..+ +...+..++..+|+.+|.|++|.|++.||+..+.........+.++.+
T Consensus        25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~  104 (190)
T 1g8i_A           25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWA  104 (190)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHH
Confidence            3455666667766 89999999999999987 334567789999999999999999999999988766555667789999


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC---CchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG---NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      |+.+|.|++|+|+..||..++..+..          ..|..   ..+...+++++.++|+.+|.|++|.|+|+||+.++.
T Consensus       105 f~~~D~d~~G~i~~~e~~~~l~~~~~----------~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~  174 (190)
T 1g8i_A          105 FKLYDLDNDGYITRNEMLDIVDAIYQ----------MVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK  174 (190)
T ss_dssp             HHHHCTTCSSEEEHHHHHHHHHHHHH----------HC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             HHhhcCCCCCeECHHHHHHHHHHHHH----------HhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            99999999999999999766433211          01110   113345677899999999999999999999999887


Q ss_pred             hhhccCCHHHHHHHHHhhc
Q 042392          379 DIYKLETPELLEKAFQYLD  397 (436)
Q Consensus       379 ~~~~~~~~~~~~~~F~~~D  397 (436)
                      ..      ..+...|..||
T Consensus       175 ~~------~~~~~~~~~~~  187 (190)
T 1g8i_A          175 AD------PSIVQALSLYD  187 (190)
T ss_dssp             HC------HHHHHHHCCBT
T ss_pred             hC------hHHHHHHhhhc
Confidence            53      24666676665

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.72  E-value=2.8e-17  Score=150.23  Aligned_cols=181  Identities=18%  Similarity=0.133  Sum_probs=139.6

Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhc---------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh----h
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKV---------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR----Q  290 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~---------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~----~  290 (436)
                      ..+..+|..+|.+.+|.|+.+|+..++...         ....+.+++..+|+.+|.|++|.|+..||...+...    .
T Consensus        58 ~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g  137 (263)
T 2f33_A           58 PEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKAN  137 (263)
T ss_dssp             HHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcC
Confidence            456788889999999999999999987543         345678889999999999999999999999887644    2


Q ss_pred             hhccHHHHH----HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCC
Q 042392          291 KLERSEYLS----KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       291 ~~~~~~~l~----~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      .......+.    .+|+.+|.|++|.|++.||...+....+..  +  ..       .........+..+|+.+|.|++|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~--~--~~-------~~~~~~~~~~~~~F~~~D~d~~G  206 (263)
T 2f33_A          138 KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL--L--KF-------QGIKMCGKEFNKAFELYDQDGNG  206 (263)
T ss_dssp             SCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH--H--HH-------HHTCCCHHHHHHHHHHHCCSSSS
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH--H--Hh-------cCcchHHHHHHHHHHHhCCCCCC
Confidence            222334444    499999999999999999976533210000  0  00       01122345789999999999999


Q ss_pred             cccHHHHHHHHHhhhc----cCCHHHHHHHHHh-hccCCCCcccHHHHHHHHHh
Q 042392          367 NIDFIEFVNLMTDIYK----LETPELLEKAFQY-LDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       367 ~i~f~EF~~~~~~~~~----~~~~~~~~~~F~~-~D~d~~G~I~~~el~~~l~~  415 (436)
                      .|+.+||..++.....    ..+++++...|+. +|.|+||.|+.+||..+|..
T Consensus       207 ~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~  260 (263)
T 2f33_A          207 YIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSA  260 (263)
T ss_dssp             CEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCC
T ss_pred             cccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhc
Confidence            9999999999877654    4566778888886 79999999999999999864

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.71  E-value=2.9e-17  Score=137.77  Aligned_cols=119  Identities=13%  Similarity=0.315  Sum_probs=96.9

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++.+|+.+|.|++|.|+..||..++..+              |.     .++..++..+++    +++|.|+|+|
T Consensus        15 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~--------------g~-----~~~~~~~~~~~~----~~~g~i~~~e   71 (156)
T 1wdc_B           15 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL--------------GR-----APDDKELTAMLK----EAPGPLNFTM   71 (156)
T ss_dssp             HHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHH--------------SS-----CCCHHHHHHHHT----TSSSCCCHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh--------------CC-----CCCHHHHHHHHH----hCCCcCcHHH
Confidence            345678999999999999999999997653322              32     334557888875    4689999999


Q ss_pred             HHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccC
Q 042392          373 FVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRD  434 (436)
Q Consensus       373 F~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~  434 (436)
                      |+.++..... ....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|.|
T Consensus        72 F~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~  135 (156)
T 1wdc_B           72 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE  135 (156)
T ss_dssp             HHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE
T ss_pred             HHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC
Confidence            9998875533 3456789999999999999999999999999999888 999999999999876

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.71  E-value=2.6e-17  Score=147.15  Aligned_cols=151  Identities=19%  Similarity=0.276  Sum_probs=115.7

Q ss_pred             cCChhhHHHHHHHhhhhCCC--CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          217 YLPGEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~--~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      .++.+++..+..+|..+|.+  ++|.|+.+||..++.. +....+..+..+|+.+|.|++|.|+|.||+..+.... ...
T Consensus        41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~  119 (226)
T 2zfd_A           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP  119 (226)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence            57899999999999999999  9999999999999987 4344455678899999999999999999999887553 334


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ..+.++.+|+.+|.|++|+|+..||..++..+          ....|..... ...+..+..+|+.+|.|++|.|+|+||
T Consensus       120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~----------~~~~g~~~~~-~~~~~~~~~~f~~~D~d~dG~I~~~EF  188 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT----------LAESGMNLKD-TVIEDIIDKTFEEADTKHDGKIDKEEW  188 (226)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHH----------HHHTTCCCCH-HHHHHHHHHHHHHHCSSCSSEECHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHH----------HHHcCCCCCH-HHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            56789999999999999999999997653221          0111221111 111223455566888999999999999


Q ss_pred             HHHHHh
Q 042392          374 VNLMTD  379 (436)
Q Consensus       374 ~~~~~~  379 (436)
                      +.++..
T Consensus       189 ~~~~~~  194 (226)
T 2zfd_A          189 RSLVLR  194 (226)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888764

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.71  E-value=7.9e-18  Score=139.60  Aligned_cols=133  Identities=20%  Similarity=0.207  Sum_probs=111.8

Q ss_pred             hhHHHHHHHhhhhCCCC-CCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHHHH
Q 042392          221 EETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSEYL  298 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~~l  298 (436)
                      ++...++.+|..+|.++ +|.|+..|+..+++.+|..++..++..+++.+|.+    |+|.||+..+... ........+
T Consensus        11 ~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l   86 (146)
T 2qac_A           11 EEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEEL   86 (146)
T ss_dssp             HHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHH
Confidence            45566889999999999 99999999999999999999999999999999887    9999999988654 334456789


Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +.+|+.+|+|++|+|+..||..++..              +     +..++++++..+++.+  |++|.|+|+||+.++.
T Consensus        87 ~~~F~~~D~d~~G~I~~~el~~~l~~--------------~-----g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           87 IKMFAHFDNNCTGYLTKSQMKNILTT--------------W-----GDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHTTCTTCSSEEEHHHHHHHHHH--------------S-----SSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHH--------------h-----CCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            99999999999999999999765322              2     3345566888999888  8899999999998764

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.71  E-value=3.2e-17  Score=137.13  Aligned_cols=121  Identities=25%  Similarity=0.396  Sum_probs=100.8

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .....++++|+.+|.|++|.|+..|| ..+..+              +...        .+..+++.+|.|++|.|+|+|
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~--------------~~~~--------~~~~~~~~~D~~~~g~i~~~e   59 (155)
T 3ll8_B            3 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPEL--------------QQNP--------LVQRVIDIFDTDGNGEVDFKE   59 (155)
T ss_dssp             HHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGG--------------TTCT--------THHHHHHHHCTTCSSSBCHHH
T ss_pred             HHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhcc--------------ccch--------HHHHHHHHHCCCCCCcCcHHH
Confidence            34567999999999999999999999 332221              1111        488999999999999999999


Q ss_pred             HHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHh-CCCC-ChHHHHHHHHh----hccCCC
Q 042392          373 FVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKE-NNMG-DDATIKEIISE----VGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~-~~~~-~~~e~~~~~~~----~d~~~d  436 (436)
                      |+.++...... ...+.++.+|+.||+|++|+|+.+||+.++.. .|.. ++++++.+++.    +|.|+|
T Consensus        60 f~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~d  130 (155)
T 3ll8_B           60 FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGD  130 (155)
T ss_dssp             HHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            99998876443 33467999999999999999999999999988 5777 89999999998    898875

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.71  E-value=3.2e-17  Score=144.40  Aligned_cols=151  Identities=21%  Similarity=0.289  Sum_probs=115.4

Q ss_pred             cCChhhHHHHHHHhhhhCCC--CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhc
Q 042392          217 YLPGEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLE  293 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~--~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~  293 (436)
                      .++++++..+..+|..+|.+  ++|.|+.+|+..++.. .....+..+..+|+.+|.|++|.|+|.||+..+.... ...
T Consensus        30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~  108 (207)
T 2ehb_A           30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP  108 (207)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence            57889999999999999999  9999999999999987 4344556788899999999999999999999887654 234


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ..+.++.+|+.+|.|++|+|+..||..++..+          ....|...+. ...+..+..+|+.+|.|++|.|+|+||
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~----------~~~~g~~~~~-~~~~~~~~~~f~~~D~d~dG~I~~~Ef  177 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVAL----------LHESELVLSE-DMIEVMVDKAFVQADRKNDGKIDIDEW  177 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH----------HHHHTCCCCH-HHHHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH----------HHHcccccCH-HHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            56779999999999999999999997653322          0111211111 111223455566888888888888888


Q ss_pred             HHHHHh
Q 042392          374 VNLMTD  379 (436)
Q Consensus       374 ~~~~~~  379 (436)
                      +.++..
T Consensus       178 ~~~~~~  183 (207)
T 2ehb_A          178 KDFVSL  183 (207)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            887764

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.71  E-value=9.5e-18  Score=138.01  Aligned_cols=117  Identities=18%  Similarity=0.286  Sum_probs=96.9

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      .+++++|+.+|+|++|.|+..||..++.              .+|.     .++..++..++.    +++|.|+|+||+.
T Consensus         5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~--------------~~g~-----~~~~~~~~~~~~----~~~g~i~~~eF~~   61 (140)
T 1ggw_A            5 SPYKQAFSLFDRHGTGRIPKTSIGDLLR--------------ACGQ-----NPTLAEITEIES----TLPAEVDMEQFLQ   61 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHH--------------HTSC-----CCCHHHHHHHHT----TSCSSEEHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHH--------------HcCC-----CCCHHHHHHHHh----CCCCcCcHHHHHH
Confidence            4688999999999999999999976532              2233     334557888876    8899999999999


Q ss_pred             HHHhhhcc---CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          376 LMTDIYKL---ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       376 ~~~~~~~~---~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ++......   ...+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.+++.+|. +|
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~d  125 (140)
T 1ggw_A           62 VLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KD  125 (140)
T ss_dssp             HHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SS
T ss_pred             HHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CC
Confidence            88766432   234789999999999999999999999999998887 99999999999987 53

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.70  E-value=1e-16  Score=141.38  Aligned_cols=122  Identities=19%  Similarity=0.290  Sum_probs=99.2

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++++|..+|.|++|+|+..||..++ .+              |..     ++   ..++++.+|.|++|.|+|+
T Consensus        25 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~l--------------g~~-----~~---~~~l~~~~d~~~~g~i~~~   81 (208)
T 2ct9_A           25 HSQITRLYSRFTSLDKGENGTLSREDFQRIP-EL--------------AIN-----PL---GDRIINAFFSEGEDQVNFR   81 (208)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HH--------------HTS-----TT---HHHHHHTTSCTTCSCEEHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc--------------CCC-----Cc---HHHHHHHHcCCCCCcCcHH
Confidence            3445679999999999999999999997641 11              121     11   3567889999999999999


Q ss_pred             HHHHHHHhhhccC----------------CHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC-ChHHHHHH----HH
Q 042392          372 EFVNLMTDIYKLE----------------TPELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG-DDATIKEI----IS  429 (436)
Q Consensus       372 EF~~~~~~~~~~~----------------~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~-~~~e~~~~----~~  429 (436)
                      ||+.++.......                ..+.++.+|+.||+|++|+|+.+||+.++..+ |.. ++++++.+    ++
T Consensus        82 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~  161 (208)
T 2ct9_A           82 GFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQ  161 (208)
T ss_dssp             HHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence            9999887654211                34679999999999999999999999999985 877 89998888    99


Q ss_pred             hhccCCC
Q 042392          430 EVGRDHK  436 (436)
Q Consensus       430 ~~d~~~d  436 (436)
                      .+|.|+|
T Consensus       162 ~~D~d~d  168 (208)
T 2ct9_A          162 EADQDGD  168 (208)
T ss_dssp             HHCSSSS
T ss_pred             HhCCCCC
Confidence            9998875

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.70  E-value=4.1e-17  Score=132.73  Aligned_cols=132  Identities=21%  Similarity=0.289  Sum_probs=107.6

Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCC
Q 042392          262 VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGL  341 (436)
Q Consensus       262 i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~  341 (436)
                      +..+|..+|.+++|.|++.||...+...........+..+|+.+|.|++|.|++.||..++..+                
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~----------------   65 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI----------------   65 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCS----------------
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHh----------------
Confidence            6789999999999999999999988765555567789999999999999999999997653211                


Q ss_pred             CCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          342 GNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                      .......+..++..+|+.+|.|++|.|+++||..++.....   . .+..+|+.+|.|++|.|+.+||.+++
T Consensus        66 ~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~---~-~~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---E-KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             SCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC---H-HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH---H-HHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            00112234456999999999999999999999999875432   1 28999999999999999999999876

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.70  E-value=3.6e-17  Score=142.87  Aligned_cols=121  Identities=17%  Similarity=0.281  Sum_probs=100.9

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++.+|..||.|++|.|+..||..++..              +|.     .++..++..++..+    +|.|+|+
T Consensus        53 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------lg~-----~~~~~~~~~l~~~~----~g~i~~~  109 (196)
T 3dtp_E           53 QHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS--------------LGR-----LCTEQELDSMVAEA----PGPINFT  109 (196)
T ss_dssp             TTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHT--------------TSC-----CCCHHHHHHHHTTS----SSCCBHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH--------------hCC-----CCCHHHHHHHHHHc----cCCCcHH
Confidence            345678999999999999999999999765322              233     34556788888877    8999999


Q ss_pred             HHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||+.++..... ....+.++.+|+.||+|++|+|+.+||+.+| .+|.. ++++++.|++.+|.|+|
T Consensus       110 eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~d  175 (196)
T 3dtp_E          110 MFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGN  175 (196)
T ss_dssp             HHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETT
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCC
Confidence            99998876433 3456789999999999999999999999999 99988 99999999999998875

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.70  E-value=2.4e-17  Score=144.23  Aligned_cols=112  Identities=21%  Similarity=0.290  Sum_probs=89.0

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL  298 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l  298 (436)
                      .+.....+..+|..+|.+.+|.|+..|+..++..++...+.+++..+|+.+|.|++|.|++.||...+.......     
T Consensus        47 ~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~-----  121 (198)
T 2r2i_A           47 SPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAIN-----  121 (198)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGG-----
T ss_pred             CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhc-----
Confidence            344456689999999999999999999999999988888889999999999999999999999998764332110     


Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                               .....+                                  ..++.+..+|+.+|.|++|.|+|+||+.++.
T Consensus       122 ---------~~~~~~----------------------------------~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A          122 ---------RCNEAM----------------------------------TAEEFTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             ---------GSSSCC----------------------------------CHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             ---------CCCchh----------------------------------hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence                     000000                                  0123488999999999999999999999886

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.70  E-value=1.4e-16  Score=140.39  Aligned_cols=161  Identities=19%  Similarity=0.245  Sum_probs=116.4

Q ss_pred             CCCCCccCHHHHHHHHHhcCCCCCHHH---HHHHHHHHcCC--CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCC
Q 042392          235 TDKNGTLSYDELRAGLTKVGSMLTEFD---VKQLMEAADMD--GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDN  309 (436)
Q Consensus       235 ~~~~g~i~~~eL~~~l~~~~~~~s~~~---i~~l~~~~d~d--~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~  309 (436)
                      ++..|.++.+++.......+  ++.++   +..+|..+|.|  ++|.|++.||..++.. ........+.++|+.+|.|+
T Consensus        11 ~~~~g~l~~~el~~l~~~~~--~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~   87 (207)
T 2ehb_A           11 KNAMRPPGYEDPELLASVTP--FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKR   87 (207)
T ss_dssp             ----------CHHHHHHHSS--CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTC
T ss_pred             hccccccCHHHHHHHHHhCC--CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCC
Confidence            35678899999988877654  45554   56778888999  9999999999988765 22333456788999999999


Q ss_pred             CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh----hccCC
Q 042392          310 SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI----YKLET  385 (436)
Q Consensus       310 ~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~----~~~~~  385 (436)
                      +|.|++.||..++...              +.    .....+.+..+|+.+|.|++|.|+++||..++...    ....+
T Consensus        88 ~g~i~~~Ef~~~~~~~--------------~~----~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~  149 (207)
T 2ehb_A           88 NGVIEFGEFVRSLGVF--------------HP----SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS  149 (207)
T ss_dssp             SSEECHHHHHHHHGGG--------------ST----TSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCeEeHHHHHHHHHHH--------------cc----CCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccC
Confidence            9999999997653222              10    11234579999999999999999999999988532    22334


Q ss_pred             HHH----HHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          386 PEL----LEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       386 ~~~----~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      +++    ++.+|+.+|.|+||.|+.+||..++...
T Consensus       150 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  184 (207)
T 2ehb_A          150 EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN  184 (207)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            433    5788899999999999999999999753

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.70  E-value=2e-16  Score=135.22  Aligned_cols=145  Identities=10%  Similarity=0.072  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhh-h-------hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQR-Q-------KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~-------~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      +++..+|..+| |++|.|+..||...+... .       ...+...+..+|+.+|.|++|.|++.||...+..       
T Consensus         4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------   75 (173)
T 1alv_A            4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------   75 (173)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------
T ss_pred             hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-------
Confidence            56889999999 999999999998887654 2       3445678999999999999999999999654211       


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET  411 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~  411 (436)
                                        ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+| |++|.|+.+||..
T Consensus        76 ------------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~  136 (173)
T 1alv_A           76 ------------------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFIS  136 (173)
T ss_dssp             ------------------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHH
T ss_pred             ------------------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHH
Confidence                              135889999999999999999999999987766667889999999999 9999999999999


Q ss_pred             HHHhCCCCChHHHHHHHHhhccCCC
Q 042392          412 AFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       412 ~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ++..     .+++..+++.+|.|+|
T Consensus       137 ~~~~-----~~~~~~~F~~~D~d~~  156 (173)
T 1alv_A          137 CLVR-----LDAMFRAFKSLDKDGT  156 (173)
T ss_dssp             HHHH-----HHHHHHHHHHHSSSCC
T ss_pred             HHHH-----HHHHHHHHHHhCCCCC
Confidence            9874     4678899999999875

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.69  E-value=1.1e-17  Score=147.60  Aligned_cols=143  Identities=19%  Similarity=0.322  Sum_probs=114.1

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh---
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL---  292 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~---  292 (436)
                      ..++++++..+..+|..+|.+++|.|+.+||..++ .++..++.   ..+++.+|.+++|.|+|.||+..+......   
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~   96 (208)
T 2ct9_A           21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN   96 (208)
T ss_dssp             HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence            35788999999999999999999999999999864 66666653   467889999999999999999988754321   


Q ss_pred             -------------ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHH---
Q 042392          293 -------------ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKL---  356 (436)
Q Consensus       293 -------------~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  356 (436)
                                   ...+.++.+|+.||+|++|+|+..||..++..+             +     +..++++++..+   
T Consensus        97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~-------------~-----g~~~s~~~~~~l~~~  158 (208)
T 2ct9_A           97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM-------------V-----GVNISDEQLGSIADR  158 (208)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------S-----CTTCCHHHHHHHHHH
T ss_pred             hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH-------------h-----CCCCCHHHHHHHHHH
Confidence                         256789999999999999999999997653221             1     222344556665   


Q ss_pred             -HHccccCCCCcccHHHHHHHHHhh
Q 042392          357 -VLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       357 -~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                       ++.+|.|+||.|+|+||+.++...
T Consensus       159 ~~~~~D~d~dG~Is~~EF~~~~~~~  183 (208)
T 2ct9_A          159 TIQEADQDGDSAISFTEFVKVLEKV  183 (208)
T ss_dssp             HHHHHCSSSSSSEEHHHHHHTTTTS
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHhcc
Confidence             999999999999999999987653

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.69  E-value=2.5e-16  Score=136.72  Aligned_cols=144  Identities=13%  Similarity=0.125  Sum_probs=109.8

Q ss_pred             HHHHHHHHHH-cCCCCCcccHHHHHHHHHhh----hhhccHHHHHHHH-----------HHhCCCCCCchhhhhhhcCcc
Q 042392          260 FDVKQLMEAA-DMDGNGAIDYTEFTAATIQR----QKLERSEYLSKAF-----------QYFDKDNSGYDEFRAMVESPQ  323 (436)
Q Consensus       260 ~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~----~~~~~~~~l~~~F-----------~~~D~~~~G~i~~~el~~~~~  323 (436)
                      .++..+|..+ |.|++|.|++.||...+...    ........+..+|           +.+|.|++|.|++.||..++.
T Consensus        12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~   91 (191)
T 2ccm_A           12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA   91 (191)
T ss_dssp             HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence            3578899999 99999999999998877554    2222334455555           999999999999999976532


Q ss_pred             hhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCc
Q 042392          324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQF  403 (436)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~  403 (436)
                      ....      .. .  +. ..........+..+|+.+|.|++|.|+++||..++....  .++++++.+|+.+|+|+||.
T Consensus        92 ~~~~------~~-~--~~-~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~  159 (191)
T 2ccm_A           92 ECVK------SV-E--KG-ESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTM  159 (191)
T ss_dssp             HHHH------HH-H--TT-CCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSC
T ss_pred             HHhc------cc-c--ch-hhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCC
Confidence            2200      00 0  00 001123345789999999999999999999999987654  66788999999999999999


Q ss_pred             ccHHHHHHHHHh
Q 042392          404 ITVNELETAFKE  415 (436)
Q Consensus       404 I~~~el~~~l~~  415 (436)
                      |+.+||..++..
T Consensus       160 i~~~Ef~~~~~~  171 (191)
T 2ccm_A          160 VTREIFARLWTE  171 (191)
T ss_dssp             CBHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            999999999875

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.69  E-value=4.7e-17  Score=141.23  Aligned_cols=162  Identities=22%  Similarity=0.212  Sum_probs=123.5

Q ss_pred             CChhhHHHHHHHhhhhCCC-CCCccCHHHHHHHHHhcCC-CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          218 LPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~-~~g~i~~~eL~~~l~~~~~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      ++.+++..   +|..+|.+ ++|.|+.+|+..++..++. ..+.+.+..+|+.+|.|++|.|++.||...+.........
T Consensus        22 ~~~~~i~~---~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~   98 (190)
T 1fpw_A           22 FDRREIQQ---WHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE   98 (190)
T ss_dssp             STHHHHHH---HHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred             CCHHHHHH---HHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcH
Confidence            45555544   45555554 7999999999999998753 3556779999999999999999999999988765545566


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC---CchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG---NTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      +.++.+|+.+|.|++|+|+..||..++..+.          ...|..   ......+++++..+|+.+|.|++|.|+|+|
T Consensus        99 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E  168 (190)
T 1fpw_A           99 EKLSWAFELYDLNHDGYITFDEMLTIVASVY----------KMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDE  168 (190)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHH----------TTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHH
T ss_pred             HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH----------HHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            7899999999999999999999976533220          001110   112235667899999999999999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhcc
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDK  398 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~  398 (436)
                      |+.++....      .+...|..||.
T Consensus       169 f~~~~~~~~------~~~~~~~~~d~  188 (190)
T 1fpw_A          169 FREGSKVDP------SIIGALNLYDG  188 (190)
T ss_dssp             HHHHHHSST------THHHHHHHHHC
T ss_pred             HHHHHHhCh------HHHHHHhhccc
Confidence            999887532      47778888874

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.69  E-value=1.3e-16  Score=145.44  Aligned_cols=163  Identities=18%  Similarity=0.216  Sum_probs=127.3

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC-CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~-~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      ++.+++..+...|...  +++|.|+.+||..++..++ ...+..++..+|+.+|.|++|.|+|.||+..+.........+
T Consensus        88 ~s~~ei~~l~~~fd~~--~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~  165 (256)
T 2jul_A           88 FTKKELQSLYRGFKNE--CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE  165 (256)
T ss_dssp             SCHHHHHHHHHHHHHH--CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHH
T ss_pred             CCHHHHHHHHHHHHhh--CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHH
Confidence            5667666666655532  4789999999999999985 567888999999999999999999999999887665555677


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC---CchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG---NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      .++.+|+.+|.|++|+|+..||..++..+.          ...|..   ......+++++..+|+.+|.|+||.|+|+||
T Consensus       166 ~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~----------~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef  235 (256)
T 2jul_A          166 KLKWAFNLYDINKDGCITKEEMLAIMKSIY----------DMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF  235 (256)
T ss_dssp             HHHHHHHHTCCSSSSCBCHHHHHHHHHHHH----------HHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHH----------HHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHH
Confidence            899999999999999999999976643321          111210   1112346678999999999999999999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhhcc
Q 042392          374 VNLMTDIYKLETPELLEKAFQYLDK  398 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~D~  398 (436)
                      +.++....      .+..+|..||.
T Consensus       236 ~~~~~~~~------~l~~~l~~~d~  254 (256)
T 2jul_A          236 LETCQKDE------NIMNSMQLFEN  254 (256)
T ss_dssp             HHHHHHCS------SHHHHHHHHHH
T ss_pred             HHHHHhCH------HHHHHHHhhcc
Confidence            99887532      37788888773

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.68  E-value=3.4e-17  Score=145.04  Aligned_cols=149  Identities=13%  Similarity=0.250  Sum_probs=112.1

Q ss_pred             cCChhhHHHHHHHhhhhCC-----CC-C--CccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCc-ccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDT-----DK-N--GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA-IDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~-----~~-~--g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~-i~~~EF~~~~~  287 (436)
                      .++++++..+...|..+|.     +. +  |.|+.+||.. +..++..++.   ..+|+.+|.|++|. |+|.||+..+.
T Consensus        44 ~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~~  119 (214)
T 2l4h_A           44 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLS  119 (214)
T ss_dssp             SCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHHH
Confidence            4688899999999999998     55 6  9999999999 8888877764   46788999999999 99999999887


Q ss_pred             hhhhh-ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCC
Q 042392          288 QRQKL-ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       288 ~~~~~-~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      ..... ...+.++.+|+.||.|++|+|+..||..++..+-..       .....++   ....+..+.++++.+|.|++|
T Consensus       120 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~-------~~~~~~s---~~e~~~~~~~~~~~~D~d~dG  189 (214)
T 2l4h_A          120 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGE-------GEDTRLS---ASEMKQLIDNILEESDIDRDG  189 (214)
T ss_dssp             HTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHS-------SSCTTCS---CTHHHHHHHHHHHHHCCSCCS
T ss_pred             HHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcc-------ccCCCCC---HHHHHHHHHHHHHHhCCCCCC
Confidence            55433 335689999999999999999999997664332100       0000011   111112344588889999999


Q ss_pred             cccHHHHHHHHHh
Q 042392          367 NIDFIEFVNLMTD  379 (436)
Q Consensus       367 ~i~f~EF~~~~~~  379 (436)
                      .|+|+||+.++..
T Consensus       190 ~Is~~EF~~~~~~  202 (214)
T 2l4h_A          190 TINLSEFQHVISR  202 (214)
T ss_dssp             SBCSHHHHHHHHT
T ss_pred             cCCHHHHHHHHHh
Confidence            9999999988764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.68  E-value=2.6e-16  Score=135.67  Aligned_cols=144  Identities=12%  Similarity=0.110  Sum_probs=108.3

Q ss_pred             HHHHHHHHHH-cCCCCCcccHHHHHHHHHhhh----hhccHHHHH-----------HHHHHhCCCCCCchhhhhhhcCcc
Q 042392          260 FDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQ----KLERSEYLS-----------KAFQYFDKDNSGYDEFRAMVESPQ  323 (436)
Q Consensus       260 ~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~----~~~~~~~l~-----------~~F~~~D~~~~G~i~~~el~~~~~  323 (436)
                      +++..+|..+ |.|++|.|++.||..++....    .......+.           .+|+.+|.|++|.|++.||..++.
T Consensus         8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~   87 (185)
T 2sas_A            8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE   87 (185)
T ss_dssp             HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence            4588899999 999999999999987765443    222333333           459999999999999999976532


Q ss_pred             hhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCc
Q 042392          324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQF  403 (436)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~  403 (436)
                      ....          ...-...........+..+|+.+|.|++|.|+++||..++....  .+++++..+|+.+|.|+||.
T Consensus        88 ~~~~----------~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~  155 (185)
T 2sas_A           88 KTIA----------TCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVT  155 (185)
T ss_dssp             HHHH----------TCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSC
T ss_pred             HHhc----------cccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHHHHHHHHhcCCCCCc
Confidence            2200          00000001122445799999999999999999999999987543  44667999999999999999


Q ss_pred             ccHHHHHHHHHh
Q 042392          404 ITVNELETAFKE  415 (436)
Q Consensus       404 I~~~el~~~l~~  415 (436)
                      |+.+||..++..
T Consensus       156 i~~~ef~~~~~~  167 (185)
T 2sas_A          156 FDLNRYKELYYR  167 (185)
T ss_dssp             CSHHHHHHHHHH
T ss_pred             CcHHHHHHHHHH
Confidence            999999999865

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.67  E-value=6e-18  Score=146.36  Aligned_cols=141  Identities=13%  Similarity=0.136  Sum_probs=92.4

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc------CCCCCHHHHHHH---------HHHHcCCCCCcccHHHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV------GSMLTEFDVKQL---------MEAADMDGNGAIDYTEF  282 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~------~~~~s~~~i~~l---------~~~~d~d~~g~i~~~EF  282 (436)
                      +++++...++.+|..+|.+++|.|+.+||..+++.+      +..++..++..+         |+.+|.|++|.|+|.| 
T Consensus         8 l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E-   86 (186)
T 2hps_A            8 ERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT-   86 (186)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH-
T ss_pred             ccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH-
Confidence            467788899999999999999999999999999876      777888888887         4888888888888888 


Q ss_pred             HHHHHhh-hhhccHHHHHHHH--HHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc
Q 042392          283 TAATIQR-QKLERSEYLSKAF--QYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ  359 (436)
Q Consensus       283 ~~~~~~~-~~~~~~~~l~~~F--~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (436)
                       ..+... ......+.+..+|  +.||+|++|+|+..||..++..+                   +...+++++..+++.
T Consensus        87 -~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~-------------------g~~~~~~~~~~~~~~  146 (186)
T 2hps_A           87 -DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV-------------------GPDLTDDKAITCFNT  146 (186)
T ss_dssp             -HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-------------------CTTCCHHHHHHHHHH
T ss_pred             -HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHH
Confidence             222221 1111222344444  55666666666666664432111                   122334455666666


Q ss_pred             cccCCCCcccHHHHHHHHHh
Q 042392          360 GDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       360 ~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +|.|++|.|+|+||+.++..
T Consensus       147 ~D~d~dG~i~~~ef~~~~~~  166 (186)
T 2hps_A          147 LDFNKNGQISRDEFLVTVND  166 (186)
T ss_dssp             HCTTCSSEEEHHHHHHHHHH
T ss_pred             HcCCCCCcCcHHHHHHHHHH
Confidence            66666666666666655543

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.67  E-value=8.2e-16  Score=130.00  Aligned_cols=143  Identities=20%  Similarity=0.210  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhh----h---hhccHHH--------HHHHHHHhCCCCCCchhhhhhhcCcc
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQR----Q---KLERSEY--------LSKAFQYFDKDNSGYDEFRAMVESPQ  323 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~----~---~~~~~~~--------l~~~F~~~D~~~~G~i~~~el~~~~~  323 (436)
                      .+++..+|..+|.|++|.|++.||..++...    .   .......        +..+|+.+|.|++|.|++.||..++.
T Consensus         3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~   82 (166)
T 3akb_A            3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV   82 (166)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred             HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            4578899999999999999999999875321    1   1111222        23779999999999999999977633


Q ss_pred             hhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCc
Q 042392          324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQF  403 (436)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~  403 (436)
                      ....-   .         ...........+..+|+.+|.|++|.|+++||..++....  .+++++..+|+.+|.|+||.
T Consensus        83 ~~~~~---~---------~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~  148 (166)
T 3akb_A           83 KRLRD---K---------PDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGK  148 (166)
T ss_dssp             HHHHH---S---------HHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSB
T ss_pred             HHhcc---C---------ccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCc
Confidence            32100   0         0000011134588999999999999999999999987765  67889999999999999999


Q ss_pred             ccHHHHHHHHHh
Q 042392          404 ITVNELETAFKE  415 (436)
Q Consensus       404 I~~~el~~~l~~  415 (436)
                      |+.+||..++..
T Consensus       149 i~~~ef~~~~~~  160 (166)
T 3akb_A          149 VGETEIVPAFAR  160 (166)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHH
Confidence            999999999865

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.67  E-value=1e-16  Score=136.83  Aligned_cols=130  Identities=16%  Similarity=0.168  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhh----hhHHHHHHHHHccccCCCCccc
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF----RAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ....++++|+.+|+|++|.|+..||..++..+-          ...|.......    .....+..+++.+|  ++|.|+
T Consensus         4 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~----------~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~   71 (174)
T 1q80_A            4 WVQKMKTYFNRIDFDKDGAITRMDFESMAERFA----------KESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGID   71 (174)
T ss_dssp             HHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHH----------HHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEE
T ss_pred             HHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHH----------HHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEc
Confidence            456799999999999999999999976643331          00112221110    01112356888898  899999


Q ss_pred             HHHHHHHHHhhhccC-----CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          370 FIEFVNLMTDIYKLE-----TPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       370 f~EF~~~~~~~~~~~-----~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      |+||+.++.......     ..+.++.+|+.||+|++|+|+.+||+.++..+| .++++++.+++.+|.|+|
T Consensus        72 ~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~d  142 (174)
T 1q80_A           72 ETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG-LDKTMAPASFDAIDTNND  142 (174)
T ss_dssp             HHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT-CCGGGHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC-CCHHHHHHHHHHhCCCCC
Confidence            999999887665411     125699999999999999999999999999885 378899999999998875

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.66  E-value=1.1e-17  Score=149.67  Aligned_cols=126  Identities=17%  Similarity=0.297  Sum_probs=94.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcc---------cc
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG---------DI  362 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------d~  362 (436)
                      ......++++|..+|+|++|.|+..||..++.             +.+|+...     ..++..++..+         |.
T Consensus        47 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~-------------~~lg~~~~-----~~~~~~~~~~~f~~~~~~~~D~  108 (226)
T 2lvv_A           47 AESKSRRIELFKQFDTNGTGKLGFREVLDGCY-------------GILKLDEF-----TTHLPDIVQRAFDKAKDLGNKV  108 (226)
T ss_dssp             HHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHH-------------HTTCCTTT-----SSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-------------HHhCCCCC-----HHHHHHHHHHHHHHhcccCCCC
Confidence            34567799999999999999999999975311             11233222     12344555555         99


Q ss_pred             CCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCCChHHHHHHHHhhccCCC
Q 042392          363 DGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       363 ~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~~~~e~~~~~~~~d~~~d  436 (436)
                      |++|.|+|+||+.++.........+.++.+|+.||+|++|+||.+||+.+|..+   +.. .++++.+++.+|.|+|
T Consensus       109 d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~-~~e~~~~~~~~D~d~d  184 (226)
T 2lvv_A          109 KGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD-ITDATTVFNEIDTNGS  184 (226)
T ss_dssp             SCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCC-CCSCHHHHHHHCCSCS
T ss_pred             CCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCC-HHHHHHHHHHhCCCCC
Confidence            999999999999964433332234679999999999999999999999999876   543 4459999999999876

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.66  E-value=2.7e-16  Score=135.06  Aligned_cols=120  Identities=13%  Similarity=0.107  Sum_probs=97.3

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccc---cCCCCccc
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGD---IDGNGNID  369 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~g~i~  369 (436)
                      ....+++++|..||  ++|.|+.+||..+                 +|+.     +++..+.++++.+|   .+++|.|+
T Consensus        25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~-----------------lg~~-----~~~~~~~~i~~~~d~~~~~~~~~i~   80 (179)
T 3a8r_A           25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKC-----------------IGMD-----GSDEFAVQMFDSLARKRGIVKQVLT   80 (179)
T ss_dssp             CCHHHHHHHHHHHC--BTTBEEGGGHHHH-----------------HTCC-----SCHHHHHHHHHHHHHHHTCCSSEEC
T ss_pred             hhHHHHHHHHhccC--CCCCCcHHHHHHH-----------------HCCC-----CcHHHHHHHHHHHHHhccCCCCCcC
Confidence            45678999999999  8999999999653                 1222     23446778888777   46789999


Q ss_pred             HHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH-hCCCC--------ChHHHHHHHHhhccCCC
Q 042392          370 FIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK-ENNMG--------DDATIKEIISEVGRDHK  436 (436)
Q Consensus       370 f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~-~~~~~--------~~~e~~~~~~~~d~~~d  436 (436)
                      |+||..++.........++++.+|+.||+|+||+|+.+||+.+|. .+|..        ++++++.|++++|.|+|
T Consensus        81 ~~ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~d  156 (179)
T 3a8r_A           81 KDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNL  156 (179)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCC
Confidence            999999877655444457899999999999999999999999998 77654        67899999999999876

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.64  E-value=2.2e-15  Score=127.83  Aligned_cols=140  Identities=16%  Similarity=0.127  Sum_probs=118.9

Q ss_pred             HHHHHcCCCCCcccHHHHHHHHHhhhh-----hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhc
Q 042392          265 LMEAADMDGNGAIDYTEFTAATIQRQK-----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF  339 (436)
Q Consensus       265 l~~~~d~d~~g~i~~~EF~~~~~~~~~-----~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~  339 (436)
                      .|..+|.|++|.|+..||...+.....     ..+...+..+|+.+|.|++|.|++.||...+..               
T Consensus         6 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~---------------   70 (167)
T 1gjy_A            6 GYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV---------------   70 (167)
T ss_dssp             HHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH---------------
T ss_pred             HHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH---------------
Confidence            478899999999999999988765432     346778999999999999999999999654211               


Q ss_pred             CCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC
Q 042392          340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG  419 (436)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~  419 (436)
                                ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+  |++|.|+.+||..++...   
T Consensus        71 ----------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~---  135 (167)
T 1gjy_A           71 ----------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL---  135 (167)
T ss_dssp             ----------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH---
T ss_pred             ----------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH---
Confidence                      13588999999999999999999999998776666788999999999  899999999999998753   


Q ss_pred             ChHHHHHHHHhhccCCC
Q 042392          420 DDATIKEIISEVGRDHK  436 (436)
Q Consensus       420 ~~~e~~~~~~~~d~~~d  436 (436)
                        +++..+++..|.|++
T Consensus       136 --~~~~~~F~~~D~d~~  150 (167)
T 1gjy_A          136 --RALTDSFRRRDSAQQ  150 (167)
T ss_dssp             --HHHHHHHHHHCTTCC
T ss_pred             --HHHHHHHHHhCCCCC
Confidence              678899999998875

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.64  E-value=1.3e-16  Score=150.02  Aligned_cols=88  Identities=27%  Similarity=0.365  Sum_probs=44.7

Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHH-HHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHH
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQ-LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQ  303 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~-l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~  303 (436)
                      .+..+|..+|.+++|.|+.++|..++  ++..++..++.. ++..+|.+++|.|+|.||+..+....      .+..+|+
T Consensus       189 ~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~~F~  260 (323)
T 1ij5_A          189 ALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILYA  260 (323)
T ss_dssp             TSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHHHHH
Confidence            34444555555555555555555554  444444555555 55555555555555555554443322      3455555


Q ss_pred             HhCCCCCCchhhhhhhc
Q 042392          304 YFDKDNSGYDEFRAMVE  320 (436)
Q Consensus       304 ~~D~~~~G~i~~~el~~  320 (436)
                      .||.|++|+|+..||..
T Consensus       261 ~~D~d~dG~Is~~El~~  277 (323)
T 1ij5_A          261 FADFDKSGQLSKEEVQK  277 (323)
T ss_dssp             HTCSSSCSSEEHHHHHH
T ss_pred             HhCCCCCCCccHHHHHH
Confidence            55555555555555543

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.64  E-value=2e-16  Score=131.08  Aligned_cols=116  Identities=16%  Similarity=0.192  Sum_probs=96.3

Q ss_pred             ccHHHHHHHHHHhCCCC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          293 ERSEYLSKAFQYFDKDN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      +....++.+|..+|.|+ +|.|+..||..++.              .+|.     .++..++..+++.+|.+    |+|+
T Consensus        11 ~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~--------------~~g~-----~~~~~~~~~l~~~~d~~----i~~~   67 (146)
T 2qac_A           11 EEKVDESDVRIYFNEKSSGGKISIDNASYNAR--------------KLGL-----APSSIDEKKIKELYGDN----LTYE   67 (146)
T ss_dssp             HHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHH--------------HTTC-----CCCHHHHHHHHHHHCSE----ECHH
T ss_pred             HHHHHHHHHHHHhCccCCCCcccHHHHHHHHH--------------HhCC-----CCCHHHHHHHHHHhCCC----CCHH
Confidence            34456899999999999 99999999976532              2233     34556799999999887    9999


Q ss_pred             HHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhh
Q 042392          372 EFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEV  431 (436)
Q Consensus       372 EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~  431 (436)
                      ||+.++..... ....+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+
T Consensus        68 eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~  129 (146)
T 2qac_A           68 QYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF  129 (146)
T ss_dssp             HHHHHHHHTCCTTCCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence            99998875432 3446789999999999999999999999999999988 999999999988

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.64  E-value=1.1e-15  Score=136.44  Aligned_cols=156  Identities=14%  Similarity=0.171  Sum_probs=114.1

Q ss_pred             ccCHHHHHHHHHhcCCCCCHHH---HHHHHHHHcCC--CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchh
Q 042392          240 TLSYDELRAGLTKVGSMLTEFD---VKQLMEAADMD--GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDE  314 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~~s~~~---i~~l~~~~d~d--~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~  314 (436)
                      .++.+++.......+  ++.++   +..+|..+|.|  ++|.|+..||..++.. ........+.++|+.+|.|++|.|+
T Consensus        27 ~l~~~~~~~l~~~~~--ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~  103 (226)
T 2zfd_A           27 SGGLGDPELLARDTV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILG  103 (226)
T ss_dssp             -----CTHHHHHHSS--CCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBC
T ss_pred             cCCHHHHHHHHHhCC--CCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCc
Confidence            345566666655544  45444   56688888999  9999999999998765 2223334678899999999999999


Q ss_pred             hhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh----hccCCHHH--
Q 042392          315 FRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI----YKLETPEL--  388 (436)
Q Consensus       315 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~----~~~~~~~~--  388 (436)
                      +.||..++...              +    .....++.+..+|+.+|.|++|.|+++||..++...    ....++++  
T Consensus       104 ~~Ef~~~~~~~--------------~----~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~  165 (226)
T 2zfd_A          104 FEEFARALSVF--------------H----PNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE  165 (226)
T ss_dssp             HHHHHHHHHHT--------------S----TTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred             HHHHHHHHHHH--------------c----cCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence            99997552221              1    011235579999999999999999999999988532    22334433  


Q ss_pred             --HHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          389 --LEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       389 --~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                        ++.+|+.+|+|+||.|+.+||..++...
T Consensus       166 ~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~  195 (226)
T 2zfd_A          166 DIIDKTFEEADTKHDGKIDKEEWRSLVLRH  195 (226)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence              5788899999999999999999999753

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.63  E-value=2.3e-15  Score=127.46  Aligned_cols=140  Identities=16%  Similarity=0.162  Sum_probs=118.7

Q ss_pred             HHHHHcCCCCCcccHHHHHHHHHhhhh-----hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhc
Q 042392          265 LMEAADMDGNGAIDYTEFTAATIQRQK-----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF  339 (436)
Q Consensus       265 l~~~~d~d~~g~i~~~EF~~~~~~~~~-----~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~  339 (436)
                      -|..+|.|++|.|+..||...+.....     ..+..++..+|+.+|.|++|.|++.||...+..               
T Consensus         4 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~---------------   68 (165)
T 1k94_A            4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA---------------   68 (165)
T ss_dssp             HHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH---------------
T ss_pred             HHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH---------------
Confidence            478899999999999999988765432     346678999999999999999999999654211               


Q ss_pred             CCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC
Q 042392          340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG  419 (436)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~  419 (436)
                                ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+  |++|.|+.+||..++...   
T Consensus        69 ----------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~---  133 (165)
T 1k94_A           69 ----------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL---  133 (165)
T ss_dssp             ----------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH---
T ss_pred             ----------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH---
Confidence                      13588999999999999999999999998776666788999999999  999999999999999753   


Q ss_pred             ChHHHHHHHHhhccCCC
Q 042392          420 DDATIKEIISEVGRDHK  436 (436)
Q Consensus       420 ~~~e~~~~~~~~d~~~d  436 (436)
                        +++..+++..|.|++
T Consensus       134 --~~~~~~F~~~D~d~~  148 (165)
T 1k94_A          134 --RALTDFFRKRDHLQQ  148 (165)
T ss_dssp             --HHHHHHHHTTCTTCC
T ss_pred             --HHHHHHHHHhCCCCC
Confidence              678899999998875

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.63  E-value=2.6e-15  Score=131.19  Aligned_cols=145  Identities=17%  Similarity=0.131  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh-----hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK-----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~-----~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      .+++.. |..+|.|++|.|+..||...+.....     ......+..+|+.+|.|++|.|++.||...+..         
T Consensus        32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~---------  101 (198)
T 1juo_A           32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV---------  101 (198)
T ss_dssp             CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH---------
T ss_pred             cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH---------
Confidence            345777 99999999999999999988765432     346778999999999999999999999654211         


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                                      ...+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+  |++|.|+.+||..++
T Consensus       102 ----------------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~  163 (198)
T 1juo_A          102 ----------------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACC  163 (198)
T ss_dssp             ----------------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHH
T ss_pred             ----------------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHH
Confidence                            13588999999999999999999999998776666788999999999  999999999999998


Q ss_pred             HhCCCCChHHHHHHHHhhccCCC
Q 042392          414 KENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       414 ~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ..     .+++..+++.+|.|+|
T Consensus       164 ~~-----~~~~~~~F~~~D~d~~  181 (198)
T 1juo_A          164 VK-----LRALTDSFRRRDTAQQ  181 (198)
T ss_dssp             HH-----HHHHHHHHHHTCTTCC
T ss_pred             HH-----HHHHHHHHHHhCCCCC
Confidence            75     3678899999999875

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.62  E-value=1.2e-15  Score=119.70  Aligned_cols=106  Identities=20%  Similarity=0.370  Sum_probs=87.4

Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHh
Q 042392          253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY  332 (436)
Q Consensus       253 ~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~  332 (436)
                      ++..++.+++..+++.+|  ++|.|+|.||+..+..  .....+.++.+|+.||+|++|+|+..||..++..+       
T Consensus         3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------   71 (109)
T 3fs7_A            3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNF-------   71 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGT-------
T ss_pred             ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHH-------
Confidence            566789999999999998  8999999999998764  34567789999999999999999999998763332       


Q ss_pred             hhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                             +  ..+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        72 -------~--~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           72 -------S--SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             -------C--TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             -------h--cccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence                   1  013345667899999999999999999999998774

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.61  E-value=1.3e-15  Score=131.34  Aligned_cols=120  Identities=13%  Similarity=0.140  Sum_probs=96.8

Q ss_pred             cHHHHHHHHHHhCC-----CC-C--CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCC
Q 042392          294 RSEYLSKAFQYFDK-----DN-S--GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGN  365 (436)
Q Consensus       294 ~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  365 (436)
                      ....++++|..+|.     |+ +  |.|+..||.. +..+              |..     ++   ..++++.+|.|++
T Consensus        18 ~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~--------------g~~-----~~---~~~l~~~~D~d~~   74 (183)
T 1dgu_A           18 EILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPEL--------------KAN-----PF---KERICRVFSTSPA   74 (183)
T ss_dssp             HHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTS--------------SSC-----TT---HHHHHHHHSCSSS
T ss_pred             HHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhh--------------hcC-----cH---HHHHHHHhCCCCC
Confidence            45678999999999     78 8  9999999975 3222              332     22   2357777899999


Q ss_pred             Cc-ccHHHHHHHHHhhhccCC-HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC-----C-ChHHHHH----HHHhhcc
Q 042392          366 GN-IDFIEFVNLMTDIYKLET-PELLEKAFQYLDKNSDQFITVNELETAFKENNM-----G-DDATIKE----IISEVGR  433 (436)
Q Consensus       366 g~-i~f~EF~~~~~~~~~~~~-~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~-~~~e~~~----~~~~~d~  433 (436)
                      |. |+|+||+.++........ .+.++.+|+.||+|++|+|+.+||+.++..++.     . ++++++.    +++.+|.
T Consensus        75 G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  154 (183)
T 1dgu_A           75 KDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDI  154 (183)
T ss_dssp             SCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCC
Confidence            99 999999998887654433 357999999999999999999999999998766     4 7788876    9999998


Q ss_pred             CCC
Q 042392          434 DHK  436 (436)
Q Consensus       434 ~~d  436 (436)
                      |+|
T Consensus       155 d~d  157 (183)
T 1dgu_A          155 DRD  157 (183)
T ss_dssp             TSS
T ss_pred             CCC
Confidence            875

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.61  E-value=2.1e-15  Score=118.06  Aligned_cols=106  Identities=24%  Similarity=0.286  Sum_probs=87.1

Q ss_pred             hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       252 ~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      .+|. ++.+++..+++.+|  ++|.|+|.||+..+..  .......++.+|+.||+|++|+|+..||..++..+      
T Consensus         2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~------   70 (108)
T 2pvb_A            2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF------   70 (108)
T ss_dssp             CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT------
T ss_pred             CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------
Confidence            5677 99999999999998  8899999999988743  24567789999999999999999999998763332      


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                              +.  .+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        71 --------~~--~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           71 --------SP--SARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             --------CT--TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             --------hc--cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                    10  12345667899999999999999999999998764

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.61  E-value=3.3e-15  Score=127.40  Aligned_cols=135  Identities=10%  Similarity=0.044  Sum_probs=111.6

Q ss_pred             cCCCCCcccHHHHHHHHHhh------hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCC
Q 042392          270 DMDGNGAIDYTEFTAATIQR------QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN  343 (436)
Q Consensus       270 d~d~~g~i~~~EF~~~~~~~------~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~  343 (436)
                      +.|++|.|+..|+...+...      ....+.++++.+|+.+|+|++|.|++.||...+..                   
T Consensus        14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------------------   74 (174)
T 2i7a_A           14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKR-------------------   74 (174)
T ss_dssp             SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHH-------------------
T ss_pred             cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------------------
Confidence            46889999999999887654      22345678999999999999999999999654111                   


Q ss_pred             chhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhh----hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC
Q 042392          344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI----YKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG  419 (436)
Q Consensus       344 ~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~----~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~  419 (436)
                            ..++.++|+.+| |++|.|+.+||..++...    ....++++++.+++.+| |++|.|+++||..++..    
T Consensus        75 ------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~----  142 (174)
T 2i7a_A           75 ------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR----  142 (174)
T ss_dssp             ------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH----
T ss_pred             ------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH----
Confidence                  125889999999 999999999999999876    44567788999999999 99999999999999874    


Q ss_pred             ChHHHHHHHHhhccCCC
Q 042392          420 DDATIKEIISEVGRDHK  436 (436)
Q Consensus       420 ~~~e~~~~~~~~d~~~d  436 (436)
                       .+++..+++..|.|++
T Consensus       143 -~~~~~~~F~~~D~d~~  158 (174)
T 2i7a_A          143 -LEAMAKTFRNLSKDGK  158 (174)
T ss_dssp             -HHHHHHHHHHHCSSSS
T ss_pred             -HHHHHHHHHHhCCCCC
Confidence             3568899999999875

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.59  E-value=1.8e-15  Score=118.63  Aligned_cols=107  Identities=23%  Similarity=0.329  Sum_probs=86.6

Q ss_pred             hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       252 ~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      .+|..++.+++..+++.+|  ++|.|+|.||+..+..  .......++.+|+.||+|++|+|+..||..++..+      
T Consensus         2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~------   71 (109)
T 1bu3_A            2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVF------   71 (109)
T ss_dssp             CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH------
T ss_pred             cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH------
Confidence            4678899999999999998  8999999999988743  24567789999999999999999999997653222      


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                              +  ..+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        72 --------~--~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           72 --------S--AGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             --------S--TTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             --------c--ccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                    1  002334566899999999999999999999998764

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.58  E-value=2.5e-15  Score=132.94  Aligned_cols=120  Identities=14%  Similarity=0.145  Sum_probs=93.9

Q ss_pred             cHHHHHHHHHHhCC-----CC-C--CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCC
Q 042392          294 RSEYLSKAFQYFDK-----DN-S--GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGN  365 (436)
Q Consensus       294 ~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  365 (436)
                      ....+.++|..+|.     |+ +  |.|+..||.. +..+                   +..++   ..++++.+|.|++
T Consensus        49 ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~l-------------------g~~~~---~~~lf~~~D~d~d  105 (214)
T 2l4h_A           49 EILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPEL-------------------KANPF---KERICRVFSTSPA  105 (214)
T ss_dssp             HHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHH-------------------HTSTT---HHHHHHHHCCSSS
T ss_pred             HHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhcc-------------------CCChH---HHHHHHHhCcCCC
Confidence            34457788888888     56 6  9999999976 3222                   11222   3467888899999


Q ss_pred             Cc-ccHHHHHHHHHhhhccCC-HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC-----C-ChHHHHH----HHHhhcc
Q 042392          366 GN-IDFIEFVNLMTDIYKLET-PELLEKAFQYLDKNSDQFITVNELETAFKENNM-----G-DDATIKE----IISEVGR  433 (436)
Q Consensus       366 g~-i~f~EF~~~~~~~~~~~~-~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~-----~-~~~e~~~----~~~~~d~  433 (436)
                      |. |+|+||+.++........ .+.++.+|+.||+|++|+|+.+||+.++..++.     . ++++++.    +++++|.
T Consensus       106 G~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~  185 (214)
T 2l4h_A          106 KDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDI  185 (214)
T ss_dssp             CCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCC
T ss_pred             CCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCC
Confidence            99 999999999886654433 457999999999999999999999999987754     4 6777765    9999998


Q ss_pred             CCC
Q 042392          434 DHK  436 (436)
Q Consensus       434 ~~d  436 (436)
                      |+|
T Consensus       186 d~d  188 (214)
T 2l4h_A          186 DRD  188 (214)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            876

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.58  E-value=2.2e-15  Score=118.40  Aligned_cols=107  Identities=22%  Similarity=0.291  Sum_probs=87.1

Q ss_pred             hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          252 KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       252 ~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      .+|..++.+++..+++.+|  ++|.|+|.||+..+..  .......++.+|+.||+|++|+|+..||..++..+      
T Consensus         2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~------   71 (110)
T 1pva_A            2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSF------   71 (110)
T ss_dssp             CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT------
T ss_pred             cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------
Confidence            3566789999999999998  8899999999988742  34567889999999999999999999998764332      


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                              +  ..+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        72 --------~--~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           72 --------A--ADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             --------C--TTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             --------h--hcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence                    1  012345567899999999999999999999998775

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.58  E-value=2.1e-15  Score=118.23  Aligned_cols=107  Identities=22%  Similarity=0.295  Sum_probs=85.6

Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHh
Q 042392          253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY  332 (436)
Q Consensus       253 ~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~  332 (436)
                      ++..++.+++..+++.+|.  +|.|+|.||+..+..  .....+.++.+|+.||+|++|+|+..||..++..+       
T Consensus         2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------   70 (109)
T 5pal_A            2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF-------   70 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH-------
T ss_pred             CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH-------
Confidence            4557899999999999987  899999999998754  34567789999999999999999999997653222       


Q ss_pred             hhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                             +  ..+..++++++..+++.+|.|++|.|+|+||+.++..
T Consensus        71 -------~--~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           71 -------S--AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             -------C--TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             -------H--HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence                   0  0023445667899999999999999999999988753

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.57  E-value=4.7e-15  Score=116.03  Aligned_cols=106  Identities=18%  Similarity=0.248  Sum_probs=86.0

Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHh
Q 042392          253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY  332 (436)
Q Consensus       253 ~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~  332 (436)
                      ++..++.+++..+++.+|  ++|.|+|.||+..+..  .......++.+|+.||+|++|+|+..||..++..+       
T Consensus         2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------   70 (108)
T 1rro_A            2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKF-------   70 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGT-------
T ss_pred             ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------
Confidence            455789999999999998  8999999999988742  24567789999999999999999999998763332       


Q ss_pred             hhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                             +.  .+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        71 -------~~--~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           71 -------QS--DARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             -------CT--TSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             -------hh--ccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence                   10  12334566899999999999999999999998764

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.56  E-value=3e-15  Score=129.28  Aligned_cols=137  Identities=17%  Similarity=0.171  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhh------hhhccHHHHHHH---------HHHhCCCCCCchhhhhhhcCcch
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQR------QKLERSEYLSKA---------FQYFDKDNSGYDEFRAMVESPQT  324 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~------~~~~~~~~l~~~---------F~~~D~~~~G~i~~~el~~~~~~  324 (436)
                      .++..+|..+|.|++|.|++.||..++...      ........+...         |+.+|.|++|.|++.|  ..+..
T Consensus        14 ~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~~   91 (186)
T 2hps_A           14 RKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLLK   91 (186)
T ss_dssp             HHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHHH
T ss_pred             HHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHHH
Confidence            457889999999999999999999887533      122233445544         7999999999999999  22111


Q ss_pred             hhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHH--HccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCC
Q 042392          325 IRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV--LQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ  402 (436)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G  402 (436)
                      +              +    ....+.+++...+  ..+|.|++|.|+++||..++.......++++++.+|+.+|+|+||
T Consensus        92 ~--------------~----~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG  153 (186)
T 2hps_A           92 M--------------K----GEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNG  153 (186)
T ss_dssp             C--------------C----THHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSS
T ss_pred             h--------------c----CChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCC
Confidence            0              0    0111112233322  556999999999999999998776667788999999999999999


Q ss_pred             cccHHHHHHHHHhC
Q 042392          403 FITVNELETAFKEN  416 (436)
Q Consensus       403 ~I~~~el~~~l~~~  416 (436)
                      .|+.+||..++...
T Consensus       154 ~i~~~ef~~~~~~~  167 (186)
T 2hps_A          154 QISRDEFLVTVNDF  167 (186)
T ss_dssp             EEEHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHH
Confidence            99999999998764

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.55  E-value=2.3e-15  Score=117.99  Aligned_cols=105  Identities=25%  Similarity=0.333  Sum_probs=84.4

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       254 ~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      |..++.+++..+++.+|  ++|.|+|.||+..+..  .....+.++.+|+.||+|++|+|+..||..++..+        
T Consensus         3 g~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~--------   70 (109)
T 1rwy_A            3 TDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGF--------   70 (109)
T ss_dssp             HHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHH--------
T ss_pred             CCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH--------
Confidence            44688999999999998  8999999999988743  24567889999999999999999999997663322        


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                            +.  .+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        71 ------~~--~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 1rwy_A           71 ------SS--DARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             ------CT--TCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             ------hc--cCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence                  10  02334566899999999999999999999998775

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.53  E-value=5e-15  Score=120.93  Aligned_cols=102  Identities=17%  Similarity=0.268  Sum_probs=63.0

Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcC
Q 042392          262 VKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG  340 (436)
Q Consensus       262 i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~  340 (436)
                      +..+|+.+|.|++|.|+|.||+..+... ......+.++.+|+.||+|++|+|+..||..++..+              |
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~--------------g   70 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGIL--------------G   70 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGG--------------T
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh--------------C
Confidence            5688999999999999999999887653 333456789999999999999999999997663332              2


Q ss_pred             CCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      .    ..++.+++..+++.+|.|++|.|+|+||+.++....
T Consensus        71 ~----~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  107 (135)
T 3h4s_E           71 I----EGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS  107 (135)
T ss_dssp             C----CCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred             C----CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence            1    245667899999999999999999999999887653

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.53  E-value=4.8e-15  Score=150.24  Aligned_cols=116  Identities=11%  Similarity=0.164  Sum_probs=51.0

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..++++|+.||+|++|+|+++||..++..+                   +..++++++.++|+.+|.|++|.|+|+||+.
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~l-------------------g~~~s~~el~~lf~~~D~d~~G~I~f~EF~~   71 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLKEL-------------------NIQVDDGYARKIFRECDHSQTDSLEDEEIET   71 (624)
T ss_dssp             ----------------------------------------------------------------------------CTTH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            468999999999999999999998774333                   4455667899999999999999999999999


Q ss_pred             HHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC--ChHHHHHHHHhhccC
Q 042392          376 LMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG--DDATIKEIISEVGRD  434 (436)
Q Consensus       376 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~--~~~e~~~~~~~~d~~  434 (436)
                      ++.....   .++++.+|+.||++ +|+||.+||+++|... |+.  +++++++||+++|.|
T Consensus        72 ~~~~l~~---~~el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d  129 (624)
T 1djx_A           72 FYKMLTQ---RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPS  129 (624)
T ss_dssp             HHHHHTC---CHHHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCC
T ss_pred             HHHHhcc---HHHHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCC
Confidence            9876543   46899999999986 9999999999999864 654  889999999999876

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.51  E-value=2.4e-15  Score=125.23  Aligned_cols=115  Identities=14%  Similarity=0.167  Sum_probs=83.2

Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhh
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK  335 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~  335 (436)
                      .++.+++..++..+|.+++    |.+|...      ......++.+|+.||+|++|+|+..||..++..           
T Consensus        20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-----------   78 (150)
T 2jjz_A           20 ARQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-----------   78 (150)
T ss_dssp             HHHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHH-----------
T ss_pred             CCcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHH-----------
Confidence            3567889999999988765    4433322      345667999999999999999999999765322           


Q ss_pred             hhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcc
Q 042392          336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI  404 (436)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I  404 (436)
                         +     +..+++.++.++++.+|.|++|.|+|+||+.++...     .+.++.+|+.||.|++|+-
T Consensus        79 ---~-----g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A           79 ---L-----GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             ---T-----TCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHHHHHHC---------
T ss_pred             ---c-----CCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHHHHHHHHcCCCCCCC
Confidence               2     233456689999999999999999999999988754     2359999999999999984

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.50  E-value=7.3e-14  Score=109.38  Aligned_cols=88  Identities=17%  Similarity=0.265  Sum_probs=77.7

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-C
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-D  420 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~  420 (436)
                      +..++++++.++++.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||+.++..+   |.. +
T Consensus         4 ~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~   79 (109)
T 3fs7_A            4 TDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT   79 (109)
T ss_dssp             GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCC
T ss_pred             cCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCC
Confidence            34567779999999998  7999999999998864  23456789999999999999999999999999998   677 9


Q ss_pred             hHHHHHHHHhhccCCC
Q 042392          421 DATIKEIISEVGRDHK  436 (436)
Q Consensus       421 ~~e~~~~~~~~d~~~d  436 (436)
                      +++++.+++.+|.|+|
T Consensus        80 ~~~~~~~~~~~D~~~d   95 (109)
T 3fs7_A           80 SAETKAFLAAGDTDGD   95 (109)
T ss_dssp             HHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            9999999999999875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.49  E-value=1e-13  Score=143.69  Aligned_cols=146  Identities=12%  Similarity=0.109  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhh--------hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHH
Q 042392          259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQR--------QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSH  330 (436)
Q Consensus       259 ~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~--------~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~  330 (436)
                      .+++..+|+.+| |++|.|+.+||...+...        ......+.++.+|..+|.|++|.|+++||...+..+     
T Consensus       531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-----  604 (714)
T 3bow_A          531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI-----  604 (714)
T ss_dssp             CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-----
Confidence            345889999999 999999999999887664        234567789999999999999999999996542111     


Q ss_pred             HhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHH
Q 042392          331 IYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELE  410 (436)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~  410 (436)
                                          +.+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+| |+||.|+++||.
T Consensus       605 --------------------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~  663 (714)
T 3bow_A          605 --------------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFV  663 (714)
T ss_dssp             --------------------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHH
T ss_pred             --------------------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHH
Confidence                                35889999999999999999999999987766677889999999999 999999999999


Q ss_pred             HHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          411 TAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       411 ~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      .++..     .+++..+++.+|.|+|
T Consensus       664 ~~l~~-----~~~l~~~F~~~D~d~d  684 (714)
T 3bow_A          664 RCLVR-----LEILFKIFKQLDPENT  684 (714)
T ss_dssp             HHHHH-----HHHHHHHHSSSCSSCC
T ss_pred             HHHHH-----HHHHHHHHHHhCCCCC
Confidence            99874     3578888888888875

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.49  E-value=3e-15  Score=117.21  Aligned_cols=106  Identities=19%  Similarity=0.272  Sum_probs=84.8

Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHh
Q 042392          253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY  332 (436)
Q Consensus       253 ~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~  332 (436)
                      ++..++.+++..+++.+|  ++|.|+|.||+..+...  ....+.++.+|+.||+|++|+|+..||..++..+       
T Consensus         2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------   70 (108)
T 2kyc_A            2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRF-------   70 (108)
T ss_dssp             TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHH-------
T ss_pred             ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------
Confidence            466789999999999988  89999999999987432  3455679999999999999999999998774332       


Q ss_pred             hhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                             +  ..+..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus        71 -------~--~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           71 -------E--SGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             -------S--SSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             -------h--hccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence                   1  001223445689999999999999999999998774

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.49  E-value=1.1e-13  Score=108.45  Aligned_cols=88  Identities=22%  Similarity=0.316  Sum_probs=77.5

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-C
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-D  420 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~  420 (436)
                      +..++++++.++++.+|.  +|.|+|+||+.++...  ....++++.+|+.||+|++|+|+.+||+.++..+   |.. +
T Consensus         3 ~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~   78 (109)
T 5pal_A            3 TKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN   78 (109)
T ss_dssp             GGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             CCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCC
Confidence            344677789999999997  8999999999988642  3456789999999999999999999999999987   777 9


Q ss_pred             hHHHHHHHHhhccCCC
Q 042392          421 DATIKEIISEVGRDHK  436 (436)
Q Consensus       421 ~~e~~~~~~~~d~~~d  436 (436)
                      +++++.+++.+|.|+|
T Consensus        79 ~~~~~~~~~~~D~~~d   94 (109)
T 5pal_A           79 DTETKALLAAGDSDHD   94 (109)
T ss_dssp             HHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            9999999999998875

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.48  E-value=1.4e-13  Score=107.72  Aligned_cols=88  Identities=18%  Similarity=0.261  Sum_probs=77.5

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-C
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-D  420 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~  420 (436)
                      |..++++++.++++.+|  ++|.|+|+||+.++...  ....+.++.+|+.||+|++|+|+.+||+.++..+   |.. +
T Consensus         3 g~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (109)
T 1rwy_A            3 TDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS   78 (109)
T ss_dssp             HHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             CCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC
Confidence            45677889999999999  89999999999987532  3456789999999999999999999999999988   666 9


Q ss_pred             hHHHHHHHHhhccCCC
Q 042392          421 DATIKEIISEVGRDHK  436 (436)
Q Consensus       421 ~~e~~~~~~~~d~~~d  436 (436)
                      +++++.+++.+|.|+|
T Consensus        79 ~~~~~~~~~~~D~~~d   94 (109)
T 1rwy_A           79 AKETKTLMAAGDKDGD   94 (109)
T ss_dssp             HHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHHCCCCC
Confidence            9999999999998875

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.47  E-value=1.8e-13  Score=125.05  Aligned_cols=144  Identities=15%  Similarity=0.140  Sum_probs=114.4

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .....|++...++.|+.+.||++..  .+..+++|+.......    ....+.+|+.+++.|.++..++++++++...+.
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~   84 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             HHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence            3456799999999999999999974  3678999998643211    112478999999999667889999999998899


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS------------------------------------  145 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~------------------------------------  145 (436)
                      .|+||||++|.+|.+.+     .+......++.++..++..||+                                    
T Consensus        85 ~~lv~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           85 SNLLMSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEEEECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             eEEEEEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            99999999998887652     1223345788899999999998                                    


Q ss_pred             -----------------------cCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          146 -----------------------MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       146 -----------------------~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                                             ..++|+|++|.||++   +.+..+.|+||+.|..
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE---ETTEEEEECCCTTCEE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEE---ECCcEEEEEEchhccc
Confidence                                   458999999999999   4445567999998864

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.47  E-value=8e-15  Score=148.61  Aligned_cols=133  Identities=10%  Similarity=0.115  Sum_probs=59.7

Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHH
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQY  304 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~  304 (436)
                      .++++|..+|.+++|.|+.+||..+++.++..++.+++..+|+.+|.|++|.|+|+||+..+....   ..++++++|+.
T Consensus        12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~~~el~~aF~~   88 (624)
T 1djx_A           12 WIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---QRAEIDRAFEE   88 (624)
T ss_dssp             --------------------------------------------------------CTTHHHHHHT---CCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---cHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999998876432   23679999999


Q ss_pred             hCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhh-hhHHHHHHHHHccccC----CCCcccHHHHHHHHHh
Q 042392          305 FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF-RAMNMLKKLVLQGDID----GNGNIDFIEFVNLMTD  379 (436)
Q Consensus       305 ~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~----~~g~i~f~EF~~~~~~  379 (436)
                      ||.+ +|+|+.+||..++...             .     +.. .+++++.++++.+|.|    ++|.|+|+||+.+|..
T Consensus        89 fD~~-~G~Is~~EL~~fL~~~-------------q-----ge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s  149 (624)
T 1djx_A           89 AAGS-AETLSVERLVTFLQHQ-------------Q-----REEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS  149 (624)
T ss_dssp             HHTT-SSSEEHHHHHHHHHHT-------------S-----CCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred             hcCC-CCeecHHHHHHHHHHH-------------h-----CCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence            9985 9999999997663221             0     122 4567899999999998    7999999999998864

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.47  E-value=1.6e-13  Score=107.18  Aligned_cols=85  Identities=16%  Similarity=0.204  Sum_probs=75.5

Q ss_pred             hhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-ChHH
Q 042392          348 RAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-DDAT  423 (436)
Q Consensus       348 ~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~~~e  423 (436)
                      ++++++.++++.+|  ++|.|+|+||+.++...  ....+.++.+|+.||+|++|+|+.+||+.++..+   |.. ++++
T Consensus         6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~   81 (108)
T 2pvb_A            6 LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAE   81 (108)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHH
T ss_pred             CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHH
Confidence            56778999999998  79999999999987532  3456789999999999999999999999999998   666 9999


Q ss_pred             HHHHHHhhccCCC
Q 042392          424 IKEIISEVGRDHK  436 (436)
Q Consensus       424 ~~~~~~~~d~~~d  436 (436)
                      ++.+++.+|.|+|
T Consensus        82 ~~~~~~~~D~~~d   94 (108)
T 2pvb_A           82 TKAFLADGDKDGD   94 (108)
T ss_dssp             HHHHHHHHCTTCS
T ss_pred             HHHHHHHhCCCCC
Confidence            9999999998875

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.47  E-value=1.5e-13  Score=107.52  Aligned_cols=87  Identities=16%  Similarity=0.206  Sum_probs=76.3

Q ss_pred             hhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-Ch
Q 042392          346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-DD  421 (436)
Q Consensus       346 ~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~~  421 (436)
                      ..++++++.++++.+|  ++|.|+|+||+.++...  ....+.++.+|+.||+|++|+|+.+||+.++..+   |.. ++
T Consensus         5 ~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~   80 (109)
T 1bu3_A            5 GILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD   80 (109)
T ss_dssp             CSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCH
T ss_pred             ccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCH
Confidence            3456778999999998  89999999999987532  3456789999999999999999999999999988   676 99


Q ss_pred             HHHHHHHHhhccCCC
Q 042392          422 ATIKEIISEVGRDHK  436 (436)
Q Consensus       422 ~e~~~~~~~~d~~~d  436 (436)
                      ++++.+++.+|.|+|
T Consensus        81 ~~~~~~~~~~D~~~d   95 (109)
T 1bu3_A           81 AETKAFLKAGDSDGD   95 (109)
T ss_dssp             HHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHhCCCCC
Confidence            999999999998875

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.46  E-value=3.1e-14  Score=151.83  Aligned_cols=133  Identities=15%  Similarity=0.284  Sum_probs=106.9

Q ss_pred             cccHHHHHHHHHhhhh---------------hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcC
Q 042392          276 AIDYTEFTAATIQRQK---------------LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG  340 (436)
Q Consensus       276 ~i~~~EF~~~~~~~~~---------------~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~  340 (436)
                      +++|.+|...+.....               ......++.+|+.||+|++|+|+..||..++..+              |
T Consensus       690 ~i~~~eF~~~~~~~~~~~e~~~l~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--------------g  755 (863)
T 1sjj_A          690 RVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISM--------------G  755 (863)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHH--------------T
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHc--------------C
Confidence            5788888776554321               1235678999999999999999999997663332              3


Q ss_pred             CCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC
Q 042392          341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG  419 (436)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~  419 (436)
                      .     .+++.++..++..+|.|++|.|+|+||+.++..... ....+.++.+|+.| .|++|+||.+||+.+|.     
T Consensus       756 ~-----~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~-----  824 (863)
T 1sjj_A          756 Y-----NMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKIL-AGDKNYITVDELRRELP-----  824 (863)
T ss_dssp             C-----CCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC-----
T ss_pred             C-----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC-----
Confidence            3     334567999999999999999999999998876543 33457899999999 89999999999999983     


Q ss_pred             ChHHHHHHHHhhccC
Q 042392          420 DDATIKEIISEVGRD  434 (436)
Q Consensus       420 ~~~e~~~~~~~~d~~  434 (436)
                       +++++.|++.+|.|
T Consensus       825 -~~~~~~l~~~~d~~  838 (863)
T 1sjj_A          825 -PDQAEYCIARMAPY  838 (863)
T ss_dssp             -HHHHHHHHHHSEEC
T ss_pred             -HHHHHHHHHHcchh
Confidence             78899999999876

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.46  E-value=2.4e-13  Score=106.56  Aligned_cols=88  Identities=22%  Similarity=0.313  Sum_probs=77.6

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-C
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-D  420 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~  420 (436)
                      |..+++.++.++++.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||+.++..+   |.. +
T Consensus         4 G~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   79 (110)
T 1pva_A            4 KDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT   79 (110)
T ss_dssp             HHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred             cccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC
Confidence            56677889999999998  8999999999998843  23456789999999999999999999999999998   666 9


Q ss_pred             hHHHHHHHHhhccCCC
Q 042392          421 DATIKEIISEVGRDHK  436 (436)
Q Consensus       421 ~~e~~~~~~~~d~~~d  436 (436)
                      +++++.+++.+|.|+|
T Consensus        80 ~~~~~~~~~~~d~~~d   95 (110)
T 1pva_A           80 DAETKAFLKAADKDGD   95 (110)
T ss_dssp             HHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            9999999999998875

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.45  E-value=8.7e-14  Score=148.36  Aligned_cols=136  Identities=14%  Similarity=0.292  Sum_probs=117.9

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~  295 (436)
                      .+++++...+..+|..+|.+++|.|+.+||..++..+|..++..++..+|+.+|.|++|.|+|.||+..+.... .....
T Consensus       718 ~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~  797 (863)
T 1sjj_A          718 GISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTA  797 (863)
T ss_dssp             CSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSS
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCH
Confidence            35677889999999999999999999999999999999999999999999999999999999999998876542 23445


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC-----CCCcccH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID-----GNGNIDF  370 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----~~g~i~f  370 (436)
                      +.+..+|+.| .|++|+|+..||..++                          +++++..+++.+|.+     +||.|+|
T Consensus       798 ~~l~~aF~~~-~d~~G~Is~~El~~~l--------------------------~~~~~~~l~~~~d~~~~~~~~dg~I~~  850 (863)
T 1sjj_A          798 DQVMASFKIL-AGDKNYITVDELRREL--------------------------PPDQAEYCIARMAPYNGRDAVPGALDY  850 (863)
T ss_dssp             HHHHHHHHGG-GTSSSEEEHHHHHHHS--------------------------CHHHHHHHHHHSEECCSSCCCTTEEES
T ss_pred             HHHHHHHHHH-hCCCCcCcHHHHHHHC--------------------------CHHHHHHHHHHcchhcCCCCCCCceeH
Confidence            6799999999 8999999999996542                          134688999999886     6899999


Q ss_pred             HHHHHHHHh
Q 042392          371 IEFVNLMTD  379 (436)
Q Consensus       371 ~EF~~~~~~  379 (436)
                      +||+.++..
T Consensus       851 ~eF~~~~~~  859 (863)
T 1sjj_A          851 MSFSTALYG  859 (863)
T ss_dssp             HHHHHHHSC
T ss_pred             HHHHHHHhc
Confidence            999998753

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.45  E-value=2.4e-13  Score=106.21  Aligned_cols=88  Identities=8%  Similarity=0.185  Sum_probs=76.5

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-C
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-D  420 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~  420 (436)
                      +..++++++.++++.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||+.++..+   |.. +
T Consensus         3 ~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 1rro_A            3 TDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT   78 (108)
T ss_dssp             GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC
T ss_pred             cccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCC
Confidence            34567789999999998  8999999999998753  23456789999999999999999999999999998   566 8


Q ss_pred             hHHHHHHHHhhccCCC
Q 042392          421 DATIKEIISEVGRDHK  436 (436)
Q Consensus       421 ~~e~~~~~~~~d~~~d  436 (436)
                      +++++.+++.+|.|+|
T Consensus        79 ~~~~~~~~~~~D~~~d   94 (108)
T 1rro_A           79 ESETKSLMDAADNDGD   94 (108)
T ss_dssp             HHHHHHHHHHHCCSSS
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            9999999999998875

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.41  E-value=1.3e-13  Score=112.38  Aligned_cols=84  Identities=17%  Similarity=0.210  Sum_probs=52.4

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC-CC-ChHHHHHHHH
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENN-MG-DDATIKEIIS  429 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~-~~~e~~~~~~  429 (436)
                      +.++++.+|.|++|.|+|+||+.++...... ...++++.+|+.||+|++|+|+.+||+.++..+| .. ++++++.+++
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~   84 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR   84 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence            5789999999999999999999988754322 2346799999999999999999999999999999 47 9999999999


Q ss_pred             hhccCCC
Q 042392          430 EVGRDHK  436 (436)
Q Consensus       430 ~~d~~~d  436 (436)
                      .+|.|+|
T Consensus        85 ~~D~d~d   91 (135)
T 3h4s_E           85 EGDLDGD   91 (135)
T ss_dssp             HHCSSCS
T ss_pred             HhCCCCC
Confidence            9998875

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.38  E-value=4.5e-13  Score=139.07  Aligned_cols=114  Identities=8%  Similarity=0.157  Sum_probs=85.1

Q ss_pred             cHHHHHHHHH--HhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc-------CC
Q 042392          294 RSEYLSKAFQ--YFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI-------DG  364 (436)
Q Consensus       294 ~~~~l~~~F~--~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-------~~  364 (436)
                      ....++++|.  .||+|++|+|+.+||..++..                        ...++.++++.+|.       ++
T Consensus       144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~------------------------~~~ev~~li~~~d~~~~~~D~d~  199 (799)
T 2zkm_X          144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA------------------------DRKRVEAALSACHLPKGKNDAIN  199 (799)
T ss_dssp             HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS------------------------CHHHHHHHHHHTTCCCCTTCEEC
T ss_pred             HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh------------------------hHHHHHHHHHHhCcCccccccCC
Confidence            3456899999  899999999999999765322                        12468889998884       88


Q ss_pred             CCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC----------ChHHHHHHHHhhcc
Q 042392          365 NGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG----------DDATIKEIISEVGR  433 (436)
Q Consensus       365 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~----------~~~e~~~~~~~~d~  433 (436)
                      +|.|+|+||+.++....   ..++++.||+.||+|++|+||.+||+++|..+ |+.          +++++++||+++|.
T Consensus       200 ~g~idf~EF~~~~~~l~---~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~  276 (799)
T 2zkm_X          200 PEDFPEPVYKSFLMSLC---PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEP  276 (799)
T ss_dssp             GGGCCHHHHHHHHHHHS---CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCC
T ss_pred             CCcCCHHHHHHHHHHcc---CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhc
Confidence            99999999999998764   35789999999999999999999999999986 552          67889999999997


Q ss_pred             C
Q 042392          434 D  434 (436)
Q Consensus       434 ~  434 (436)
                      |
T Consensus       277 d  277 (799)
T 2zkm_X          277 S  277 (799)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.36  E-value=4.8e-13  Score=138.88  Aligned_cols=157  Identities=10%  Similarity=0.079  Sum_probs=105.2

Q ss_pred             hhhhHHHHHHHhcC---ChhhHHHHHHHhh--hhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcC-------C
Q 042392          205 KLKKLTVKVIVEYL---PGEETQALKEKFI--EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM-------D  272 (436)
Q Consensus       205 d~~s~~~~~~~~~l---~~e~~~~l~~~F~--~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~-------d  272 (436)
                      .+|.-|+..+....   .......++++|.  .+|.+++|.|+..||...++.     ..+++..+++.+|.       +
T Consensus       124 ~~Wv~GL~~L~~~~~~~~~~~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d  198 (799)
T 2zkm_X          124 KAWAEDVLALVKHPLTANASRSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAI  198 (799)
T ss_dssp             HHHHHHHHHHHHCTTGGGCCHHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccC
Confidence            46776676666554   2234566889999  799999999999999998765     47899999999985       7


Q ss_pred             CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCC-chhhhhHH
Q 042392          273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN-TKQFRAMN  351 (436)
Q Consensus       273 ~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  351 (436)
                      ++|.|+|+||+..+....   ..++++++|+.||++++|+|+.+||..++.....-.          .++. .....+++
T Consensus       199 ~~g~idf~EF~~~~~~l~---~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~----------~~~~~~~~~~t~e  265 (799)
T 2zkm_X          199 NPEDFPEPVYKSFLMSLC---PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDS----------RLNSLLFPPARPD  265 (799)
T ss_dssp             CGGGCCHHHHHHHHHHHS---CCHHHHTTCC--------CCCHHHHHHHHHHTCC-------------------------
T ss_pred             CCCcCCHHHHHHHHHHcc---CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCc----------ccccccccCCCHH
Confidence            889999999998876542   346899999999999999999999987644331000          0000 00114567


Q ss_pred             HHHHHHHccccC----CCCcccHHHHHHHHHh
Q 042392          352 MLKKLVLQGDID----GNGNIDFIEFVNLMTD  379 (436)
Q Consensus       352 ~~~~~~~~~d~~----~~g~i~f~EF~~~~~~  379 (436)
                      ++++|++.+|.|    ++|.|+|+||+.+|..
T Consensus       266 e~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S  297 (799)
T 2zkm_X          266 QVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG  297 (799)
T ss_dssp             CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred             HHHHHHHHhhcccccccCCccchhhhhhcccC
Confidence            899999999998    8999999999998864

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.33  E-value=5.9e-13  Score=109.60  Aligned_cols=62  Identities=11%  Similarity=0.023  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhh-----hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcch
Q 042392          263 KQLMEAADMDGNGAIDYTEFTAATIQRQ-----KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQT  324 (436)
Q Consensus       263 ~~l~~~~d~d~~g~i~~~EF~~~~~~~~-----~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~  324 (436)
                      ..+|+.+|.|++|.|+++||+..+....     .....+.++.+|+.||+|++|+|+..||..++..
T Consensus        30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~   96 (143)
T 3a4u_B           30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITH   96 (143)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHH
Confidence            4578888888889999999887765431     1234567899999999999999999999877443

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.32  E-value=1.9e-13  Score=106.76  Aligned_cols=87  Identities=13%  Similarity=0.177  Sum_probs=74.8

Q ss_pred             hhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-Ch
Q 042392          346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-DD  421 (436)
Q Consensus       346 ~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~~  421 (436)
                      ..++++++.++++.+|  ++|.|+|+||+.++...  ....+.++.+|+.||+|++|+|+.+||+.++..+   |.. ++
T Consensus         4 ~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~   79 (108)
T 2kyc_A            4 DILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTA   79 (108)
T ss_dssp             SSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCT
T ss_pred             ccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCH
Confidence            3456778999999998  89999999999988532  2334579999999999999999999999999987   666 88


Q ss_pred             HHHHHHHHhhccCCC
Q 042392          422 ATIKEIISEVGRDHK  436 (436)
Q Consensus       422 ~e~~~~~~~~d~~~d  436 (436)
                      ++++.+++.+|.|+|
T Consensus        80 ~~~~~~~~~~D~d~d   94 (108)
T 2kyc_A           80 SETKTFLAAADHDGD   94 (108)
T ss_dssp             TTTHHHHTTTCCSSS
T ss_pred             HHHHHHHHHhCCCCC
Confidence            999999999998875

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.32  E-value=6.8e-12  Score=114.13  Aligned_cols=140  Identities=11%  Similarity=0.096  Sum_probs=100.9

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCC-CeeeceeeeecC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP-NIVELKSAHEDE   99 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~-niv~~~~~~~~~   99 (436)
                      ......|.+....+.|+.+.||++.. .+|..+++|+.....       ...+.+|+.+++.+..++ .+++++.+....
T Consensus        16 ~~~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~-------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~   87 (264)
T 1nd4_A           16 VERLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEA   87 (264)
T ss_dssp             TTTTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred             HHhcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCccc-------chhhhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence            34455677766656677799999964 567789999875431       124678999999985442 266788888888


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--------------------------------
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--------------------------------  147 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--------------------------------  147 (436)
                      +..|+||||++|.+|.  .   ...+   ...++.++...+..||+..                                
T Consensus        88 ~~~~~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (264)
T 1nd4_A           88 GRDWLLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD  159 (264)
T ss_dssp             SCEEEEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred             CCCEEEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence            8899999999998873  1   1111   2245666667777777543                                


Q ss_pred             --------------------------cccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          148 --------------------------VMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       148 --------------------------i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                                                ++|+|++|.||++   +.++.+.|+|||.|..
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMV---ENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE---ETTEEEEECCCTTCEE
T ss_pred             hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE---ECCcEEEEEcchhccc
Confidence                                      9999999999999   4445567999999865

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.31  E-value=4e-13  Score=111.23  Aligned_cols=111  Identities=9%  Similarity=0.122  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhc
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF  339 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~  339 (436)
                      ..++.+...+..    ...|.+|...      ......++.+|+.||+|++|+|+..||..++..              +
T Consensus        22 ~~l~~~~~~~~~----~~~~~~~~~l------~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~--------------~   77 (147)
T 1wy9_A           22 ERLEGINKQFLD----DPKYSNDEDL------PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK--------------L   77 (147)
T ss_dssp             HHHHHHHHHHTT----CHHHHTCTTH------HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHH--------------T
T ss_pred             HHHHHHHHHHhc----CcchhHHHHH------HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------h
Confidence            345555555522    2244444332      234567999999999999999999999765322              2


Q ss_pred             CCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcc
Q 042392          340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI  404 (436)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I  404 (436)
                           +..+++.++..+++.+|.|++|.|+|+||+.++...     .+.++.+|+.||.|++|..
T Consensus        78 -----g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A           78 -----GVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             -----TCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGGGGGGGCCCC-----
T ss_pred             -----CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHHHHHHHHccCCCCCC
Confidence                 233456689999999999999999999999988653     4468999999999999985

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.31  E-value=5.7e-13  Score=105.02  Aligned_cols=74  Identities=16%  Similarity=0.215  Sum_probs=57.0

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...+.++.+|+.||.| +|+|+..||+.++...  +...            .+...+++++.++++.+|.|+||.|+|+|
T Consensus        12 ~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~--~~~~------------l~~~~~~~~v~~~i~~~D~d~DG~IdF~E   76 (121)
T 4drw_A           12 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKE--FPGF------------LENQKDPLAVDKIMKDLDQCRDGKVGFQS   76 (121)
T ss_dssp             HHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTS--CHHH------------HTTSSCTTHHHHHHHHHCTTCSSCCCHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHH--hhhh------------cccCCCHHHHHHHHHHHcCCCCCcCcHHH
Confidence            3457799999999988 8999999998764331  0000            13344556899999999999999999999


Q ss_pred             HHHHHHhhh
Q 042392          373 FVNLMTDIY  381 (436)
Q Consensus       373 F~~~~~~~~  381 (436)
                      |+.+|..+.
T Consensus        77 F~~lm~~l~   85 (121)
T 4drw_A           77 FFSLIAGLT   85 (121)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987654

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.30  E-value=7.9e-13  Score=101.31  Aligned_cols=68  Identities=28%  Similarity=0.528  Sum_probs=56.4

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .+..++++++|+.||+|++|+|+..||..++..+              |     ..++++++.++++.+|.|+||.|+|+
T Consensus        32 ~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~l--------------g-----~~~~~~ei~~l~~~~D~d~dG~I~~~   92 (100)
T 2lv7_A           32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSL--------------G-----YMPNEVELEVIIQRLDMDGDGQVDFE   92 (100)
T ss_dssp             GGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH--------------T-----CCCCTTTHHHHHHHHCSSCSSSBCHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh--------------C-----CCCCHHHHHHHHHHHCCCCCCeEeHH
Confidence            4556789999999999999999999997664332              3     33455579999999999999999999


Q ss_pred             HHHHHHH
Q 042392          372 EFVNLMT  378 (436)
Q Consensus       372 EF~~~~~  378 (436)
                      ||+.+|.
T Consensus        93 EF~~~m~   99 (100)
T 2lv7_A           93 EFVTLLG   99 (100)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhC
Confidence            9999874

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.27  E-value=1.4e-13  Score=109.98  Aligned_cols=103  Identities=16%  Similarity=0.189  Sum_probs=49.1

Q ss_pred             HHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH-----HHHhh-hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcc
Q 042392          250 LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA-----ATIQR-QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQ  323 (436)
Q Consensus       250 l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~-----~~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~  323 (436)
                      ++.+|.+++.+++..++...    +|.|+|+||+.     .+... ........++++|+.||    |+|+..||..++.
T Consensus         2 lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~   73 (123)
T 2kld_A            2 STAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLK   73 (123)
T ss_dssp             -----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTT
T ss_pred             hhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHH
Confidence            56788889999999999876    88999999998     44332 22334466889999999    9999999976532


Q ss_pred             hhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      .              +|     .  +++++.++++.+|.|++|.|+|+||+.++....
T Consensus        74 ~--------------lG-----~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~  110 (123)
T 2kld_A           74 G--------------KG-----H--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE  110 (123)
T ss_dssp             T--------------CC-----S--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred             H--------------hC-----C--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            2              22     2  566899999999999999999999999886544

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.26  E-value=3.2e-12  Score=105.12  Aligned_cols=103  Identities=17%  Similarity=0.214  Sum_probs=50.5

Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .-...|+.+|+|++|.|+++||...+..+..              ........++.+..+|+.+|.|++|.|+++||..+
T Consensus        28 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~--------------~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~   93 (143)
T 3a4u_B           28 ASFSQPGSMGLDKNTVHDQEHIMEHLEGVIN--------------KPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTA   93 (143)
T ss_dssp             -------------------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHT
T ss_pred             CCHHHHHHhCCCCCCcCcHHHHHHHHHHHhc--------------ccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence            3457899999999999999999876433200              00011123457889999999999999999999998


Q ss_pred             HHhhh--------ccCCHHHH----HHHHHhhccCCCCcccHHHHHHHH
Q 042392          377 MTDIY--------KLETPELL----EKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       377 ~~~~~--------~~~~~~~~----~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                      +....        ...+++++    ..+|+.+|+|+||.|+++||..++
T Consensus        94 l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B           94 ITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             CC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             HHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            87653        12344444    677799999999999999998765

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.21  E-value=2.3e-11  Score=93.11  Aligned_cols=70  Identities=31%  Similarity=0.619  Sum_probs=66.5

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .+++++...++.+|..+|.+++|.|+.+||..+++.+|..++.++++.+++.+|.|++|.|+|+||+..+
T Consensus        29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            3578889999999999999999999999999999999999999999999999999999999999999865

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.21  E-value=2.4e-11  Score=100.80  Aligned_cols=88  Identities=20%  Similarity=0.377  Sum_probs=73.5

Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHH
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS  299 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~  299 (436)
                      .+....+..+|..+|.+.+|.|+.+||..+++.++..++.+++..+++.+|.|++|.|+|.||+..+...     ...+.
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~  120 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL  120 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            4667889999999999999999999999999999999999999999999999999999999999987654     23599


Q ss_pred             HHHHHhCCCCCCc
Q 042392          300 KAFQYFDKDNSGY  312 (436)
Q Consensus       300 ~~F~~~D~~~~G~  312 (436)
                      .+|+.||.+++|+
T Consensus       121 ~aF~~~D~d~~G~  133 (150)
T 2jjz_A          121 KLVMMFEGKANES  133 (150)
T ss_dssp             HHHHC--------
T ss_pred             HHHHHHcCCCCCC
Confidence            9999999999997

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.20  E-value=4.7e-11  Score=93.99  Aligned_cols=68  Identities=18%  Similarity=0.315  Sum_probs=61.3

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +.+..+..+|..+|.+ +|.|+..||+..++.     ++..++.++++.+++.+|.|+||.|+|+||+..+...
T Consensus        12 ~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l   84 (121)
T 4drw_A           12 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   84 (121)
T ss_dssp             HHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            3467899999999988 799999999999987     6788899999999999999999999999999887544

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.20  E-value=1e-12  Score=98.18  Aligned_cols=85  Identities=27%  Similarity=0.351  Sum_probs=64.9

Q ss_pred             CCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHH
Q 042392          272 DGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN  351 (436)
Q Consensus       272 d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (436)
                      |++|.|+|+|++  +...........++++|+.+|+|++|+|+..||..++..              +     +..++++
T Consensus         1 ~~~G~i~~~e~~--~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~--------------~-----~~~~~~~   59 (87)
T 1s6j_A            1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR--------------V-----GSELMES   59 (87)
T ss_dssp             CCSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHT--------------T-----TSSCCHH
T ss_pred             CCCCccCccHHH--HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------h-----CCCCCHH
Confidence            578999999943  222233344567899999999999999999999765322              2     3344566


Q ss_pred             HHHHHHHccccCCCCcccHHHHHHHH
Q 042392          352 MLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       352 ~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++..+++.+|.|++|.|+|+||+.++
T Consensus        60 ~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           60 EIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            89999999999999999999998754

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.19  E-value=7.9e-11  Score=104.91  Aligned_cols=147  Identities=12%  Similarity=0.146  Sum_probs=93.5

Q ss_pred             HHHHHHHhhhhCC-CCCCccCHHHHHHHHHhcC--------CCCC-----HHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          223 TQALKEKFIEMDT-DKNGTLSYDELRAGLTKVG--------SMLT-----EFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       223 ~~~l~~~F~~~D~-~~~g~i~~~eL~~~l~~~~--------~~~s-----~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +..+.++|+.... .++..++..++...+..+-        ....     ..-++.+|+.+|.|++|.|+|.||+.++.-
T Consensus        81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~  160 (261)
T 1eg3_A           81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  160 (261)
T ss_dssp             HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHH
Confidence            4445566665543 3445678887766655431        1112     223566899999999999999999999888


Q ss_pred             hhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcc
Q 042392          289 RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI  368 (436)
Q Consensus       289 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i  368 (436)
                      .......++++.+|+++| |++|+|+.+||...+.++..+-..++.. ..+     +....+..++.+|+.+|  +||.|
T Consensus       161 l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~-~~~-----~~~~~e~~v~~~F~~~d--~dg~I  231 (261)
T 1eg3_A          161 LCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEV-ASF-----GGSNIEPSVRSCFQFAN--NKPEI  231 (261)
T ss_dssp             TSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCG-GGG-----TCSCCHHHHHHHHHHTT--TCSCB
T ss_pred             HcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCc-ccC-----CCCCHHHHHHHHHHhCC--CCCcC
Confidence            777777889999999999 9999999999977654443332222110 000     11112334555555553  45556


Q ss_pred             cHHHHHHHHH
Q 042392          369 DFIEFVNLMT  378 (436)
Q Consensus       369 ~f~EF~~~~~  378 (436)
                      +.+||+..+.
T Consensus       232 t~~EFl~~~~  241 (261)
T 1eg3_A          232 EAALFLDWMR  241 (261)
T ss_dssp             CHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            6666655443

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.19  E-value=1.1e-11  Score=93.56  Aligned_cols=83  Identities=24%  Similarity=0.428  Sum_probs=62.6

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...+.++.+|+.||.|++|+|+..||..++..              +     +..+++.++..++..+|.|++|.|+|+|
T Consensus         6 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------~-----g~~~~~~~~~~l~~~~d~~~dg~i~~~e   66 (92)
T 2kn2_A            6 DAEEELKEAFKVFDKDQNGYISASELRHVMIN--------------L-----GEKLTDEEVEQMIKEADLDGDGQVNYEE   66 (92)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------T-----TCCCCHHHHHHHHHHHCSSCCSSEEHHH
T ss_pred             cHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH--------------h-----CCCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            34567899999999999999999998755322              2     2334556899999999999999999999


Q ss_pred             HHHHHHhhhccC---CHHHHHHHHH
Q 042392          373 FVNLMTDIYKLE---TPELLEKAFQ  394 (436)
Q Consensus       373 F~~~~~~~~~~~---~~~~~~~~F~  394 (436)
                      |+.++.......   ..+++++||+
T Consensus        67 F~~~~~~~~~~~~~~~~~~l~~aF~   91 (92)
T 2kn2_A           67 FVKMMMTVRGGGGGNGWSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHTTTCCCHHHHHHHHHHT
T ss_pred             HHHHHHhccCCCCCchHHHHHHHhc
Confidence            999887655432   2366778774

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.17  E-value=2.8e-11  Score=99.96  Aligned_cols=88  Identities=19%  Similarity=0.389  Sum_probs=77.6

Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHH
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS  299 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~  299 (436)
                      .++...+..+|..+|.+.+|.|+.+||..++..++..++..++..+++.+|.|++|.|+|.||+..+...     ...+.
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~  118 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL  118 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            5678889999999999999999999999999999999999999999999999999999999999887644     34588


Q ss_pred             HHHHHhCCCCCCc
Q 042392          300 KAFQYFDKDNSGY  312 (436)
Q Consensus       300 ~~F~~~D~~~~G~  312 (436)
                      .+|+.||.+++|.
T Consensus       119 ~aF~~~D~d~~g~  131 (147)
T 1wy9_A          119 RMILMYEEKNKEH  131 (147)
T ss_dssp             GGGGGCCCC----
T ss_pred             HHHHHHccCCCCC
Confidence            9999999999997

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.16  E-value=1.7e-10  Score=119.83  Aligned_cols=113  Identities=8%  Similarity=0.183  Sum_probs=94.5

Q ss_pred             HHHHHHHHHH--hCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC-------CC
Q 042392          295 SEYLSKAFQY--FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID-------GN  365 (436)
Q Consensus       295 ~~~l~~~F~~--~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------~~  365 (436)
                      ...++++|..  +|+|++|.|+.+++...+..                        ...++..+++.+|.+       ++
T Consensus       149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------------------------~~~~v~~l~~~~d~~~~~~d~~~~  204 (885)
T 3ohm_B          149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------------------------DKKRVETALESCGLKFNRSESIRP  204 (885)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------------------------GHHHHHHHHHTTTCCCSTTCEECG
T ss_pred             HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc------------------------CHHHHHHHHHHhCCCccccccCCC
Confidence            4568899998  89999999999988765221                        123688899999887       88


Q ss_pred             CcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC-C---------C-ChHHHHHHHHhhccC
Q 042392          366 GNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN-M---------G-DDATIKEIISEVGRD  434 (436)
Q Consensus       366 g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~-~---------~-~~~e~~~~~~~~d~~  434 (436)
                      |.|+|+||..++.....   .++++.+|+.||.+++|+||.+||+++|...+ +         . +++++++||++++.|
T Consensus       205 g~i~feEF~~f~~~l~~---R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~  281 (885)
T 3ohm_B          205 DEFSLEIFERFLNKLCL---RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPN  281 (885)
T ss_dssp             GGCCHHHHHHHHHHHSC---CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCC
T ss_pred             CcCCHHHHHHHHHhcCC---HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCC
Confidence            99999999999986653   56899999999999999999999999998753 4         2 678999999998876

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.16  E-value=1.2e-11  Score=94.47  Aligned_cols=75  Identities=15%  Similarity=0.072  Sum_probs=58.1

Q ss_pred             ccHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....++++|+.|| +||+ |+|+..||+.++...             ++ ...+..+++++++++++.+|.|+||.|+|
T Consensus         7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~-------------l~-~~lg~~~~~~ev~~~i~~~D~dgDG~Idf   72 (101)
T 3nso_A            7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKE-------------LA-TWTPTEFRECDYNKFMSVLDTNKDCEVDF   72 (101)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHH-------------TT-TCCCCTTCHHHHHHHHHHHHHCCCSCEEH
T ss_pred             HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHH-------------hh-hhcCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence            34578999999997 8997 999999997663320             11 00134566778999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++....
T Consensus        73 ~EF~~~~~~~~   83 (101)
T 3nso_A           73 VEYVRSLACLC   83 (101)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887543

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.15  E-value=3.1e-11  Score=89.77  Aligned_cols=80  Identities=19%  Similarity=0.268  Sum_probs=55.0

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++.+|+.+|+|++|+|+..||..++..+                   + .++..++..+++.+|.|++|.|+|+
T Consensus         7 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g-~~~~~~~~~~~~~~D~~~dg~i~~~   66 (86)
T 2opo_A            7 PQDIADRERIFKRFDTNGDGKISSSELGDALKTL-------------------G-SVTPDEVRRMMAEIDTDGDGFISFD   66 (86)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTT-------------------T-TCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred             HhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHc-------------------C-CCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            3345678888888888888888888886552221                   2 3455678888888888888888888


Q ss_pred             HHHHHHHhhhccCCHHHHHHHH
Q 042392          372 EFVNLMTDIYKLETPELLEKAF  393 (436)
Q Consensus       372 EF~~~~~~~~~~~~~~~~~~~F  393 (436)
                      ||+.++.....  ..+++++||
T Consensus        67 eF~~~~~~~~~--~~~~~~~aF   86 (86)
T 2opo_A           67 EFTDFARANRG--LVKDVSKIF   86 (86)
T ss_dssp             HHHHHHHHCTT--THHHHHHHC
T ss_pred             HHHHHHHHCcc--HHHHHHHhC
Confidence            88887765432  234555554

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.14  E-value=1.9e-10  Score=85.51  Aligned_cols=85  Identities=27%  Similarity=0.407  Sum_probs=71.5

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhcc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLER  294 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~  294 (436)
                      +..+++++...+..+|..+|.+++|.|+.+|+..+++.++ .++.+++..+++.+|.|++|.|+|.||+..+.....  .
T Consensus         2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~--~   78 (86)
T 2opo_A            2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG--L   78 (86)
T ss_dssp             ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT--T
T ss_pred             CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc--H
Confidence            3456888999999999999999999999999999999999 999999999999999999999999999988765432  2


Q ss_pred             HHHHHHHH
Q 042392          295 SEYLSKAF  302 (436)
Q Consensus       295 ~~~l~~~F  302 (436)
                      ...+.++|
T Consensus        79 ~~~~~~aF   86 (86)
T 2opo_A           79 VKDVSKIF   86 (86)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            34455554

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.12  E-value=3.6e-10  Score=85.10  Aligned_cols=86  Identities=31%  Similarity=0.536  Sum_probs=75.1

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc---c
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE---R  294 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~---~  294 (436)
                      .+++....+..+|..+|.+.+|.|+.+||..++..++..++.+++..+++.+|.|++|.|+|.||+..+.......   .
T Consensus         3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~   82 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG   82 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred             CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence            4567788899999999999999999999999999999999999999999999999999999999999887654332   3


Q ss_pred             HHHHHHHHH
Q 042392          295 SEYLSKAFQ  303 (436)
Q Consensus       295 ~~~l~~~F~  303 (436)
                      .++++.+|+
T Consensus        83 ~~~l~~aF~   91 (92)
T 2kn2_A           83 WSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            466777774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.11  E-value=2.1e-10  Score=109.61  Aligned_cols=141  Identities=19%  Similarity=0.298  Sum_probs=103.2

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEee--cCCccchhhHHHHHHHHHHHHHhcCC-CCCeeeceeeeecC---CeE
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMA--KKPKMKYAENDMMIRREIQIRRLLSG-QPNIVELKSAHEDE---TAV  102 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~--~~~~~~~~~~~~~~~~E~~~l~~l~~-h~niv~~~~~~~~~---~~~  102 (436)
                      -.+.|+.|.++.||++...  +..+++|+..  ....   ......+.+|..+++.|.. +..+++++.++.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            4677899999999998853  4678888765  2211   1123467899999999953 45688888888766   458


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-------------------------------------  145 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-------------------------------------  145 (436)
                      |+||||++|..+.+..  ...++......++.++...|..||+                                     
T Consensus       117 ~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             EEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            9999999997774311  1236778888899999999999997                                     


Q ss_pred             ---------------------cCcccccCCCCcceeeccCCC--CcEEEEecCCccc
Q 042392          146 ---------------------MGVMHRDLKPENFCFISRDDN--ALLKVTDFGSALL  179 (436)
Q Consensus       146 ---------------------~~i~Hrdlkp~Nill~~~~~~--~~~kl~DFG~a~~  179 (436)
                                           ..++|+|++|.||++   +.+  ..+.|+||+.|..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~---~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMF---HPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEE---CSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEE---eCCCCcEEEEECcccccc
Confidence                                 358999999999999   433  2369999998864

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.11  E-value=1.7e-10  Score=119.77  Aligned_cols=157  Identities=7%  Similarity=0.087  Sum_probs=116.2

Q ss_pred             hhhhHHHHHHHhcC---ChhhHHHHHHHhhh--hCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-------
Q 042392          205 KLKKLTVKVIVEYL---PGEETQALKEKFIE--MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-------  272 (436)
Q Consensus       205 d~~s~~~~~~~~~l---~~e~~~~l~~~F~~--~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-------  272 (436)
                      .+|.-|+..+...+   .......+.++|..  +|.+++|.|+..++...++.     ..+++..+++.+|.+       
T Consensus       128 ~~W~~gL~~L~~~~~~~~~~~~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~  202 (885)
T 3ohm_B          128 KVWSEELFKLAMNILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESI  202 (885)
T ss_dssp             HHHHHHHHHHHHCHHHHTCCHHHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEE
T ss_pred             HHHHHHHHHHHhhhhhcccCHHHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccC
Confidence            35655554444432   11234567888887  89999999999999988774     467899999999987       


Q ss_pred             CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCc-hhhhhHH
Q 042392          273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT-KQFRAMN  351 (436)
Q Consensus       273 ~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  351 (436)
                      ++|.|+|+||...+....   ...+++.+|+.||.+++|.|+..||..++.....-          -.++.. ....+.+
T Consensus       203 ~~g~i~feEF~~f~~~l~---~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e----------~~~~e~~~~~~t~e  269 (885)
T 3ohm_B          203 RPDEFSLEIFERFLNKLC---LRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRD----------PRLNEVLYPPLRPS  269 (885)
T ss_dssp             CGGGCCHHHHHHHHHHHS---CCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSC----------TTSCTTTSCCCCHH
T ss_pred             CCCcCCHHHHHHHHHhcC---CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCc----------ccccccccccCCHH
Confidence            788999999998876432   34679999999999999999999998775443100          000000 0124667


Q ss_pred             HHHHHHHccccC----CCCcccHHHHHHHHHh
Q 042392          352 MLKKLVLQGDID----GNGNIDFIEFVNLMTD  379 (436)
Q Consensus       352 ~~~~~~~~~d~~----~~g~i~f~EF~~~~~~  379 (436)
                      ++.+|+++++.+    ++|.|+|++|..+|..
T Consensus       270 ~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          270 QARLLIEKYEPNQQFLERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             HHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred             HHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence            899999999998    7899999999999864

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.09  E-value=6.2e-11  Score=88.34  Aligned_cols=72  Identities=22%  Similarity=0.309  Sum_probs=58.7

Q ss_pred             CCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          363 DGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       363 ~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |++|.|+|+|+  ++.........+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.+++.+|.|+|
T Consensus         1 ~~~G~i~~~e~--~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~   73 (87)
T 1s6j_A            1 HSSGHIDDDDK--HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS   73 (87)
T ss_dssp             CCSSSSSSHHH--HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCS
T ss_pred             CCCCccCccHH--HHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC
Confidence            57899999993  33322222233568999999999999999999999999999887 99999999999998865

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.09  E-value=5.3e-11  Score=92.75  Aligned_cols=74  Identities=14%  Similarity=0.218  Sum_probs=56.4

Q ss_pred             ccHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.++++|+.|| +|++| +|+..||..++...  +...       +     +..++++++.++++.+|.|+||.|+|
T Consensus        19 ~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~--l~~~-------l-----g~~~t~~ev~~li~~~D~dgdG~Idf   84 (113)
T 2lnk_A           19 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRE--LPSF-------L-----GKRTDEAAFQKLMSNLDSNRDNEVDF   84 (113)
T ss_dssp             HHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHH--CGGG-------G-----TTCCCTTHHHHHHHHHCSSSSSCBCH
T ss_pred             hHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHH--cchh-------c-----CCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence            44678999999999 89997 99999997663221  0000       1     23345568999999999999999999


Q ss_pred             HHHHHHHHhh
Q 042392          371 IEFVNLMTDI  380 (436)
Q Consensus       371 ~EF~~~~~~~  380 (436)
                      +||+.++...
T Consensus        85 ~EF~~~m~~~   94 (113)
T 2lnk_A           85 QEYCVFLSCI   94 (113)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988753

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.09  E-value=1.5e-10  Score=88.30  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=58.5

Q ss_pred             hccHHHHHHHHHHhCCCC---CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcc
Q 042392          292 LERSEYLSKAFQYFDKDN---SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI  368 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~---~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i  368 (436)
                      ....+.++++|+.||.++   +|+|+..||+.++...              +....+...++.++.++++.+|.|+||.|
T Consensus         7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~--------------~~~~l~~~~~~~ev~~~i~~~D~d~DG~I   72 (100)
T 3nxa_A            7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKE--------------LNHMLSDTGNRKAADKLIQNLDANHDGRI   72 (100)
T ss_dssp             HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHH--------------STTTTCSSHHHHHHHHHHHHSCCCSSCCB
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHH--------------ccccccccccHHHHHHHHHHhCCCCCCCC
Confidence            345678999999999964   7999999997653221              11111233456789999999999999999


Q ss_pred             cHHHHHHHHHhhhc
Q 042392          369 DFIEFVNLMTDIYK  382 (436)
Q Consensus       369 ~f~EF~~~~~~~~~  382 (436)
                      +|+||+.++.....
T Consensus        73 df~EF~~~m~~~~~   86 (100)
T 3nxa_A           73 SFDEYWTLIGGITG   86 (100)
T ss_dssp             CHHHHHHHHHHHHG
T ss_pred             cHHHHHHHHHHHHH
Confidence            99999999987654

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.07  E-value=9.2e-11  Score=92.05  Aligned_cols=90  Identities=13%  Similarity=0.122  Sum_probs=58.7

Q ss_pred             cHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhh-hhHHHHHHHHHccccCCCCcccH
Q 042392          294 RSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF-RAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       294 ~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ....++++|+.|| +|++| +|+..||..++..             .+|... ... .++.++.++++.+|.|+||.|+|
T Consensus        10 ~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~-------------~lg~~~-~~~~~~~~~v~~l~~~~D~d~dG~I~f   75 (113)
T 1xk4_C           10 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRK-------------DLQNFL-KKENKNEKVIEHIMEDLDTNADKQLSF   75 (113)
T ss_dssp             HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHH-------------HTTTTT-TTGGGCHHHHHHHHHHHCTTCSSSBCH
T ss_pred             HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHH-------------Hhhhhh-cccccCHHHHHHHHHHhCCCCCCCEeH
Confidence            3567999999999 49999 9999999765321             111100 011 45678999999999999999999


Q ss_pred             HHHHHHHHhhhccCCHHHHHHHHHhhccCCCCc
Q 042392          371 IEFVNLMTDIYKLETPELLEKAFQYLDKNSDQF  403 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~  403 (436)
                      +||+.++....     ......|...| +++|.
T Consensus        76 ~EF~~~~~~~~-----~~~~~~f~~~~-~~~g~  102 (113)
T 1xk4_C           76 EEFIMLMARLT-----WASHEKMHEGD-EGPGH  102 (113)
T ss_dssp             HHHHHHHHHHH-----HHHHC------------
T ss_pred             HHHHHHHHHHH-----HHHHHHHhhCC-CCCcc
Confidence            99999887653     24567788888 88885

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.07  E-value=1.2e-11  Score=98.70  Aligned_cols=83  Identities=13%  Similarity=0.207  Sum_probs=41.4

Q ss_pred             hhhhhHHHHHHHHHccccCCCCcccHHHHHH-----HHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC
Q 042392          345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN-----LMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNM  418 (436)
Q Consensus       345 ~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~-----~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~  418 (436)
                      |.++++.++.++++.+    +|.|+|+||+.     ++..... ....++++.+|+.||    |+|+.+||+.+|+.+|.
T Consensus         6 G~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~   77 (123)
T 2kld_A            6 GINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH   77 (123)
T ss_dssp             -------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS
T ss_pred             CCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC
Confidence            5556777899999877    89999999998     6654322 222356899999999    99999999999999988


Q ss_pred             CChHHHHHHHHhhccCCC
Q 042392          419 GDDATIKEIISEVGRDHK  436 (436)
Q Consensus       419 ~~~~e~~~~~~~~d~~~d  436 (436)
                       +++++++|++++|.|+|
T Consensus        78 -t~~ei~~~~~~~D~d~d   94 (123)
T 2kld_A           78 -TDAEIEAIFTKYDQDGD   94 (123)
T ss_dssp             -SHHHHHHHHHHHSSSSC
T ss_pred             -CHHHHHHHHHHHcCCCC
Confidence             99999999999999875

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.07  E-value=8.3e-11  Score=88.62  Aligned_cols=76  Identities=13%  Similarity=0.124  Sum_probs=56.3

Q ss_pred             hccHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          292 LERSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ......++++|+.|| +||+ |+|+..||+.++...             +|- ..+...++++++++++.+|.|+||.|+
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~-------------lg~-~l~~~~~~~ev~~~i~~~D~d~DG~Id   71 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRE-------------LPS-FLGKRTDEAAFQKLMSNLDSNRDNEVD   71 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHH-------------CGG-GC---CCHHHHHHHHHHHCTTSSSSBC
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHH-------------hhh-hccCCCCHHHHHHHHHHHCCCCCCCCc
Confidence            345678999999997 6885 899999997663320             110 012234567899999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 042392          370 FIEFVNLMTDIY  381 (436)
Q Consensus       370 f~EF~~~~~~~~  381 (436)
                      |+||+.++....
T Consensus        72 f~EF~~~~~~~~   83 (93)
T 4eto_A           72 FQEYCVFLSCIA   83 (93)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887644

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.06  E-value=7.7e-11  Score=90.52  Aligned_cols=76  Identities=13%  Similarity=0.138  Sum_probs=57.2

Q ss_pred             hccHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          292 LERSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ......++++|+.|| +||+ |+|+..||..++...             +|- ..+..+++.+++++++.+|.|+||.|+
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~-------------lg~-~l~~~~~~~ev~~~i~~~D~dgDG~Id   74 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRE-------------LPS-WLGKRTDEAAFQKLMSNLDSNRDNEVD   74 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHH-------------CGG-GSCSSCCHHHHHHHHHHHCTTCSSSBC
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHH-------------cch-hccCCCCHHHHHHHHHHHcCCCCCCCc
Confidence            345678999999997 7886 899999997663320             110 002234567899999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 042392          370 FIEFVNLMTDIY  381 (436)
Q Consensus       370 f~EF~~~~~~~~  381 (436)
                      |+||+.++..+.
T Consensus        75 f~EF~~~m~~~~   86 (104)
T 3zwh_A           75 FQEYCVFLSSIA   86 (104)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887654

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.04  E-value=1.3e-10  Score=84.28  Aligned_cols=68  Identities=22%  Similarity=0.406  Sum_probs=49.8

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ..+.++.+|+.+|+|++|+|+..||..++..+                   +..+++.++..+++.+|.|++|.|+|+||
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d~~~~g~i~~~eF   65 (77)
T 2joj_A            5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-------------------GFDVKKPEILELMNEYDREGNGYIGFDDF   65 (77)
T ss_dssp             HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-------------------TCCCHHHHHHHHHHHHCCSSSSEEEHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHHCCCCCCcCcHHHH
Confidence            45568888888888888888888886553222                   23345567888888888888888888888


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.++...
T Consensus        66 ~~~~~~~   72 (77)
T 2joj_A           66 LDIMTEK   72 (77)
T ss_dssp             HHHHTHH
T ss_pred             HHHHHHH
Confidence            8877643

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=99.04  E-value=1.1e-10  Score=88.50  Aligned_cols=74  Identities=14%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             ccHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.++++|+.|| +|++| +|+..||..++...  +...            .+..+++.++.++++.+|.|++|.|+|
T Consensus         9 ~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~--~~~~------------lg~~~~~~~v~~~~~~~D~d~dG~I~f   74 (95)
T 2wcb_A            9 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKE--LANT------------IKNIKDKAVIDEIFQGLDANQDEQVDF   74 (95)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHH--THHH------------HHHCCCHHHHHHHHTTSSSSTTSEEEH
T ss_pred             HHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHH--hhhh------------ccccccHHHHHHHHHHHcCCCCCcCcH
Confidence            34567999999999 89998 99999997764321  0000            133456678999999999999999999


Q ss_pred             HHHHHHHHhh
Q 042392          371 IEFVNLMTDI  380 (436)
Q Consensus       371 ~EF~~~~~~~  380 (436)
                      +||+.++...
T Consensus        75 ~EF~~~~~~~   84 (95)
T 2wcb_A           75 QEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988653

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.03  E-value=4e-10  Score=87.20  Aligned_cols=86  Identities=10%  Similarity=0.114  Sum_probs=66.2

Q ss_pred             CcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHH
Q 042392          275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK  354 (436)
Q Consensus       275 g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (436)
                      ..+++.++...+.... ......++.+|+.||+|++|+|+..||..++..+                   +..+++.++.
T Consensus         4 ~~~~~~~~~~~l~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-------------------g~~~~~~e~~   63 (105)
T 1wlz_A            4 MATADRDILARLHKAV-TSHYHAITQEFENFDTMKTNTISREEFRAICNRR-------------------VQILTDEQFD   63 (105)
T ss_dssp             CTTCCHHHHHHHHHHH-HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------------------TCCCCHHHHH
T ss_pred             cchhHHHHHHHHHHHH-HchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-------------------CCCCCHHHHH
Confidence            3467777777665443 3446789999999999999999999997653322                   3334566899


Q ss_pred             HHHHccccCCCCcccHHHHHHHHHhh
Q 042392          355 KLVLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       355 ~~~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                      .++..+|.|++|.|+|+||+.++...
T Consensus        64 ~l~~~~d~~~~g~i~~~eF~~~~~~~   89 (105)
T 1wlz_A           64 RLWNEMPVNAKGRLKYPDFLSRFSSE   89 (105)
T ss_dssp             HHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred             HHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence            99999999999999999999988643

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.02  E-value=1.2e-09  Score=81.92  Aligned_cols=76  Identities=28%  Similarity=0.469  Sum_probs=69.9

Q ss_pred             HHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       214 ~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++..+++++...+..+|..+|.+++|.|+.+||..+++.+|.+++.+++..+++.+|.|++|.|+|.||+..+...
T Consensus        10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            3445788899999999999999999999999999999999999999999999999999999999999999887543

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.02  E-value=1.4e-10  Score=81.29  Aligned_cols=61  Identities=21%  Similarity=0.337  Sum_probs=33.6

Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +.+|+.+|.|++|.|+..||..++..+                   +..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~-------------------~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKK-------------------RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHc-------------------cCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            455666666666666666665432221                   2333444556666666666666666666665543

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.02  E-value=4e-09  Score=93.92  Aligned_cols=98  Identities=12%  Similarity=0.093  Sum_probs=77.0

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..+..+|+.||+|++|+|++.||+.++..+                   .....++.++.+|+.+| |+||.|+.+|+..
T Consensus       132 ~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l-------------------~rG~leeKL~w~F~lyD-D~~G~I~~~El~~  191 (261)
T 1eg3_A          132 MCLNWLLNVYDTGRTGRIRVLSFKTGIISL-------------------CKAHLEDKYRYLFKQVA-SSTGFCDQRRLGL  191 (261)
T ss_dssp             HHHHHHHHHHCTTCCSEEEHHHHHHHHHHT-------------------SSSCHHHHHHHHHHHHS-CTTSCBCHHHHHH
T ss_pred             HHHHHHHHHccCCCCceEeHHHHHHHHHHH-------------------cCCCHHHHHHHHHheee-CCCCCCcHHHHHH
Confidence            346779999999999999999997663332                   11224457999999999 9999999999998


Q ss_pred             HHHhhhc-------------cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          376 LMTDIYK-------------LETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       376 ~~~~~~~-------------~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ++..+.+             ...++.++.+|+.+|  +||.||.+||.++++.
T Consensus       192 il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~  242 (261)
T 1eg3_A          192 LLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRL  242 (261)
T ss_dssp             HHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHh
Confidence            8854211             122456899999986  8999999999999874

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.01  E-value=1.6e-10  Score=87.58  Aligned_cols=74  Identities=15%  Similarity=0.238  Sum_probs=53.5

Q ss_pred             ccHHHHHHHHHHhC-CCC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....++++|+.|| +|+ +|+|+..||..++...             ++ ...+..+++.++.++++.+|.|+||.|+|
T Consensus         6 ~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~-------------~~-~~lg~~~~~~~v~~l~~~~D~d~dG~I~f   71 (95)
T 1j55_A            6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKE-------------LP-GFLQSGKDKDAVDKLLKDLDANGDAQVDF   71 (95)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHH-------------ST-TCC------CHHHHHHHHHCSSSSSSEEH
T ss_pred             HHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHH-------------hH-hhcccccCHHHHHHHHHHhCCCCCCcCCH
Confidence            34567999999999 798 5899999997663221             00 00133456668999999999999999999


Q ss_pred             HHHHHHHHhh
Q 042392          371 IEFVNLMTDI  380 (436)
Q Consensus       371 ~EF~~~~~~~  380 (436)
                      +||+.++...
T Consensus        72 ~EF~~~~~~~   81 (95)
T 1j55_A           72 SEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.01  E-value=1.7e-10  Score=88.05  Aligned_cols=75  Identities=15%  Similarity=0.168  Sum_probs=57.3

Q ss_pred             ccHHHHHHHHHHhC-CCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....++++|+.|| +|++| +|+..||..++...      +       + ...+..+++.++.++++.+|.|+||.|+|
T Consensus         7 ~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~------~-------~-~~lg~~~~~~~v~~l~~~~D~d~dG~I~f   72 (99)
T 2y5i_A            7 GAMDALITVFHNYSGSEGDKYKLSKGELKELLNAE------L-------T-DFLMSQKDPMLVEKIMNDLDSNKDNEVDF   72 (99)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHH------S-------G-GGGTTSCCHHHHHHHHHHHCTTCSSSEEH
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHH------h-------h-hhccccccHHHHHHHHHHHCCCCCCcCcH
Confidence            34667999999997 89998 99999997663221      0       0 00133456678999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++....
T Consensus        73 ~EF~~~~~~~~   83 (99)
T 2y5i_A           73 NEFVVLVAALT   83 (99)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887543

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.00  E-value=1.3e-10  Score=87.19  Aligned_cols=70  Identities=29%  Similarity=0.388  Sum_probs=52.0

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ......++.+|+.||+|++|+|+..||..++..              +|     ..+++.++..+++.+|.|++|.|+|+
T Consensus        16 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------~g-----~~~~~~~~~~l~~~~D~~~dg~i~~~   76 (90)
T 1avs_A           16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRM--------------LG-----QNPTKEELDAIIEEVDEDGSGTIDFE   76 (90)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------TT-----CCCCHHHHHHHHHHHCTTCCSSEEHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------hC-----CCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            344567888899999999999888888655222              22     23445678888888888888889999


Q ss_pred             HHHHHHHhh
Q 042392          372 EFVNLMTDI  380 (436)
Q Consensus       372 EF~~~~~~~  380 (436)
                      ||+.++...
T Consensus        77 eF~~~~~~~   85 (90)
T 1avs_A           77 EFLVMMVRQ   85 (90)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            988877654

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=98.99  E-value=1.1e-09  Score=79.20  Aligned_cols=71  Identities=30%  Similarity=0.560  Sum_probs=66.4

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ++++...+..+|..+|.+++|.|+.+|+..+++.++..++.+++..+|+.+|.+++|.|+|.||+..+...
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   72 (77)
T 2joj_A            2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK   72 (77)
T ss_dssp             CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            56788899999999999999999999999999999999999999999999999999999999999887543

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.98  E-value=2.6e-10  Score=85.93  Aligned_cols=74  Identities=18%  Similarity=0.260  Sum_probs=55.9

Q ss_pred             ccHHHHHHHHHHhCCCCCC---chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          293 ERSEYLSKAFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G---~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      .....++++|+.|| +++|   +|+..||..++...      +       + ...+..+++.++.++++.+|.|+||.|+
T Consensus         6 ~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~------~-------~-~~lg~~~~~~~v~~~~~~~D~d~dG~I~   70 (92)
T 3rm1_A            6 KAVVALIDVFHQYS-GREGDKHKLKKSELKELINNE------L-------S-HFLEEIKEQEVVDKVMETLDSNGDGECD   70 (92)
T ss_dssp             HHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHH------C-------T-TTSCCCCSHHHHHHHHHHHCTTSSSSBC
T ss_pred             HHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHH------h-------h-hhccCcccHHHHHHHHHHHcCCCCCCCc
Confidence            34567999999999 7766   99999997653321      0       0 0013445677899999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 042392          370 FIEFVNLMTDIY  381 (436)
Q Consensus       370 f~EF~~~~~~~~  381 (436)
                      |+||+.++..+.
T Consensus        71 f~EF~~~~~~l~   82 (92)
T 3rm1_A           71 FQEFMAFVAMIT   82 (92)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887643

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.97  E-value=2.4e-10  Score=86.06  Aligned_cols=67  Identities=19%  Similarity=0.223  Sum_probs=52.8

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+..+++++|+.||+|++|+|+..|+..++..              .|       ++++++.++++.+|.|++|.|+|+|
T Consensus         6 ~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~--------------~g-------~~~~~~~~i~~~~D~d~dG~i~~~E   64 (92)
T 1fi6_A            6 EQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--------------SK-------LPILELSHIWELSDFDKDGALTLDE   64 (92)
T ss_dssp             HHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH--------------HS-------SCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------cC-------CCHHHHHHHHHHHCCCCCCCCCHHH
Confidence            34567899999999999999999998765322              22       2345789999999999999999999


Q ss_pred             HHHHHHhh
Q 042392          373 FVNLMTDI  380 (436)
Q Consensus       373 F~~~~~~~  380 (436)
                      |+.+|...
T Consensus        65 F~~~~~~~   72 (92)
T 1fi6_A           65 FCAAFHLV   72 (92)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887643

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.97  E-value=5.4e-10  Score=82.95  Aligned_cols=70  Identities=16%  Similarity=0.126  Sum_probs=54.4

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHH---HHHHHHccccCCCCcc
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM---LKKLVLQGDIDGNGNI  368 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~g~i  368 (436)
                      ......++.+|+.||.|++|+|+..||..++..              +|     ..+++.+   +..++..+|.|++|.|
T Consensus        10 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------~g-----~~~~~~~~~~~~~~~~~~d~~~~g~i   70 (86)
T 1j7q_A           10 PEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK--------------LG-----QTYTKRETEAIMKEARGPKGDKKNIG   70 (86)
T ss_dssp             STHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH--------------TS-----CCCSHHHHHHHHHHHHCSSCSSCCBC
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------Hc-----CCCCHHHHHHHHHHHHHhCCCCCCcC
Confidence            344667899999999999999999998765322              23     3345567   8999999999999999


Q ss_pred             cHHHHHHHHHhhh
Q 042392          369 DFIEFVNLMTDIY  381 (436)
Q Consensus       369 ~f~EF~~~~~~~~  381 (436)
                      +| ||+.++....
T Consensus        71 ~~-eF~~~~~~~~   82 (86)
T 1j7q_A           71 PE-EWLTLCSKWV   82 (86)
T ss_dssp             TT-HHHHHHHHHH
T ss_pred             CH-HHHHHHHHHH
Confidence            99 9998886543

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.96  E-value=2.6e-10  Score=86.50  Aligned_cols=67  Identities=19%  Similarity=0.139  Sum_probs=53.4

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+.++++++|+.||+|++|+|+..|+..++.              .+|       .+++++.++++.+|.|++|.|+|+|
T Consensus         7 ~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~--------------~~g-------~~~~~~~~i~~~~D~d~dG~i~~~E   65 (95)
T 1c07_A            7 AEKAKYDEIFLKTDKDMDGFVSGLEVREIFL--------------KTG-------LPSTLLAHIWSLCDTKDCGKLSKDQ   65 (95)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHH--------------TTT-------CCHHHHHHHHHHHCTTCSSSEETTT
T ss_pred             HHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH--------------HcC-------CCHHHHHHHHHHHCCCCCCcCCHHH
Confidence            3456799999999999999999999865522              222       2345799999999999999999999


Q ss_pred             HHHHHHhh
Q 042392          373 FVNLMTDI  380 (436)
Q Consensus       373 F~~~~~~~  380 (436)
                      |+.+|...
T Consensus        66 F~~~~~~~   73 (95)
T 1c07_A           66 FALAFHLI   73 (95)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887643

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=98.96  E-value=7.6e-11  Score=90.95  Aligned_cols=72  Identities=14%  Similarity=0.183  Sum_probs=54.0

Q ss_pred             ccHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.++++|+.|| +|++ |+|+..||..++...             +|...    .++.++.++++.+|.|+||.|+|
T Consensus        19 ~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~-------------lg~~~----~~~~ev~~li~~~D~d~dG~Idf   81 (106)
T 2h2k_A           19 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQ-------------LPHLL----KDVGSLDEKMKSLDVNQDSELKF   81 (106)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHH-------------CTTTT----TTCCCHHHHHHHHCTTCSSSEEH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHH-------------cCcCC----CCHHHHHHHHHHHCCCCCCCCcH
Confidence            34568999999999 7997 799999997653221             11110    01236999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++....
T Consensus        82 ~EF~~~~~~~~   92 (106)
T 2h2k_A           82 NEYWRLIGELA   92 (106)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887654

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.96  E-value=3.1e-10  Score=86.62  Aligned_cols=67  Identities=21%  Similarity=0.175  Sum_probs=53.8

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...+.++++|+.||+|++|+|+..|+..++              +..|       ++++++.++++.+|.|++|.|+|+|
T Consensus         8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l--------------~~~~-------l~~~~l~~i~~~~D~d~dG~i~~~E   66 (99)
T 1qjt_A            8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFL--------------KKSG-------LPDLILGKIWDLADTDGKGVLSKQE   66 (99)
T ss_dssp             TTCTHHHHHHHHHCCTTSSCCCSHHHHHHH--------------HTSS-------SCHHHHHHHHHHHCCSSSSSCCSHH
T ss_pred             hhHHHHHHHHHHHCCCCCCcCCHHHHHHHH--------------HHcC-------CCHHHHHHHHHHHCCCCCCcCCHHH
Confidence            345679999999999999999999987652              2222       2345799999999999999999999


Q ss_pred             HHHHHHhh
Q 042392          373 FVNLMTDI  380 (436)
Q Consensus       373 F~~~~~~~  380 (436)
                      |+.+|..+
T Consensus        67 F~~~~~~~   74 (99)
T 1qjt_A           67 FFVALRLV   74 (99)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988643

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.95  E-value=4.1e-10  Score=78.90  Aligned_cols=63  Identities=19%  Similarity=0.387  Sum_probs=55.5

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      +.++|+.+|.|++|.|+++||..++.......+.++++.+|+.+|.|++|.|+.+||..++..
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            346788999999999999999999887655455678999999999999999999999999864

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.95  E-value=2.4e-09  Score=83.90  Aligned_cols=86  Identities=14%  Similarity=0.208  Sum_probs=64.0

Q ss_pred             hhHHHHHHHhhhhCC-CCCC-ccCHHHHHHHHH-hcCCC-----CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh
Q 042392          221 EETQALKEKFIEMDT-DKNG-TLSYDELRAGLT-KVGSM-----LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL  292 (436)
Q Consensus       221 e~~~~l~~~F~~~D~-~~~g-~i~~~eL~~~l~-~~~~~-----~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~  292 (436)
                      +.+..++.+|..+|. +.+| .|+.+||..+++ .++..     ++..++..+++.+|.|++|.|+|+||+..+....  
T Consensus         9 ~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~--   86 (113)
T 1xk4_C            9 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT--   86 (113)
T ss_dssp             HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH--
Confidence            346788999999995 9999 999999999999 67742     5889999999999999999999999998876443  


Q ss_pred             ccHHHHHHHHHHhCCCCCCc
Q 042392          293 ERSEYLSKAFQYFDKDNSGY  312 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~  312 (436)
                         ......|...| +++|.
T Consensus        87 ---~~~~~~f~~~~-~~~g~  102 (113)
T 1xk4_C           87 ---WASHEKMHEGD-EGPGH  102 (113)
T ss_dssp             ---HHHHC------------
T ss_pred             ---HHHHHHHhhCC-CCCcc
Confidence               34677888999 99996

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=98.95  E-value=1.2e-09  Score=76.67  Aligned_cols=63  Identities=17%  Similarity=0.268  Sum_probs=57.8

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      +.++|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|++|.|+.+||..++..
T Consensus         3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            678999999999999999999999988766677889999999999999999999999999864

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.94  E-value=4.1e-10  Score=81.36  Aligned_cols=67  Identities=24%  Similarity=0.371  Sum_probs=46.1

Q ss_pred             cHHHHHHHHHHh-CCCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhh--hHHHHHHHHHccccCCCCccc
Q 042392          294 RSEYLSKAFQYF-DKDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR--AMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ..+.++.+|+.| |+|++ |+|+..||..++..+                   +..+  +.+++..+++.+|.|++|.|+
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~-------------------g~~~~~~~~~~~~l~~~~D~~~~g~i~   63 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-------------------GPSLLKGMSTLDEMIEEVDKNGDGEVS   63 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH-------------------GGGSCTTSCSHHHHHHHHCTTCSSEEC
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHh-------------------CCCcCCCHHHHHHHHHHhCCCCCCcEe
Confidence            345678888888 88888 888888876553222                   2222  334577788888888888888


Q ss_pred             HHHHHHHHHh
Q 042392          370 FIEFVNLMTD  379 (436)
Q Consensus       370 f~EF~~~~~~  379 (436)
                      |+||+.++..
T Consensus        64 ~~eF~~~~~~   73 (76)
T 1qx2_A           64 FEEFLVMMKK   73 (76)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	436
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-37
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-36
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-36
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-36
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-35
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-35
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-35
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-34
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-33
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-33
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-33
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-32
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-32
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-31
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-30
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-30
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-30
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-29
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-29
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-29
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-28
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-28
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-28
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-27
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-27
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-27
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-26
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-26
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-26
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-26
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-26
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-26
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-26
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-25
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-25
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-25
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-24
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-23
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-23
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-23
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	9e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-22
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-22
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-22
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-22
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-21
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-21
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-21
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-20
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-20
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-19
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	3e-16
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	1e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-15
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	3e-15
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	7e-07
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	1e-05
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	4e-15
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.001
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	7e-15
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	3e-05
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	0.002
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	8e-15
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-14
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-14
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-08
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-04
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	2e-14
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	3e-05
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	5e-14
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	1e-04
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	5e-14
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	3e-04
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	5e-14
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	3e-06
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	7e-14
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-13
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	1e-07
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	2e-13
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	4e-10
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	9e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-13
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	7e-13
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-12
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	2e-09
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	2e-08
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	4e-07
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	1e-12
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	9e-06
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	1e-12
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	4e-07
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	2e-12
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	8e-09
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	5e-06
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	2e-05
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-12
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	6e-10
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	0.001
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	3e-12
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	5e-12
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	4e-09
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	1e-06
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	8e-12
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	9e-10
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	2e-06
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	8e-05
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	1e-11
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	3e-04
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	1e-11
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	2e-11
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	5e-09
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	2e-04
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	3e-11
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-11
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-05
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	6e-11
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	9e-06
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	6e-11
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	0.004
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	8e-11
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	0.004
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	1e-10
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	2e-04
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-10
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	3e-04
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	1e-10
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	8e-06
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	1e-04
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	2e-04
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	2e-10
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	2e-10
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	9e-06
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.001
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.002
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	2e-10
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	0.002
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	3e-10
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	4e-05
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	5e-10
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	9e-10
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-09
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	6e-06
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-05
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-09
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-05
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	7e-05
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	4e-09
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	5e-09
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	0.004
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	8e-09
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	4e-05
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	2e-08
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	3e-08
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	0.004
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	7e-08
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	7e-08
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	7e-04
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	7e-08
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	4e-04
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	1e-07
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	4e-04
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	0.002
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	2e-07
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	3e-07
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	2e-06
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	0.004
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	9e-06
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	1e-05
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	2e-05
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	2e-05
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	2e-05
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	3e-05
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	6e-04
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	5e-05
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.004
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	7e-05
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	9e-05
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	1e-04
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	3e-04
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	0.004
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	3e-04
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-04
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	4e-04
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.002
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.003
d1iq3a_	110	a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9	0.004

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  134 bits (338), Expect = 5e-37
 Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 8/163 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-----MIRREIQIR 80
           +Y    +LGRG   V   C    T   YA K +       ++  ++        +E+ I 
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R +SG PNI++LK  +E  T   +V +L + G+LFD +  K   SE++   ++RA++  +
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              H + ++HRDLKPEN   I  DD+  +K+TDFG +   +  
Sbjct: 124 CALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPG 163

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  134 bits (338), Expect = 2e-36
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
            ++ V+ HY     LG G FGV +  TE +T   +A K +   P     E    +R+EIQ
Sbjct: 20  KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKE---TVRKEIQ 75

Query: 79  IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIV 137
              +L   P +V L  A ED+  + ++ E   GG+LF+++  +    SE +A   +R + 
Sbjct: 76  TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 134

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             +   H    +H DLKPEN    +   +  LK+ DFG     + +
Sbjct: 135 KGLCHMHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGLTAHLDPK 179

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (333), Expect = 5e-36
 Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 18  KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
           K  ED+   Y F  +LG G F    L  +  T    A K +AKK       +   +  EI
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS---MENEI 58

Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            +   +   PNIV L   +E    ++++M+L  GG+LFDRI+ KG+Y+ERDA+ ++  ++
Sbjct: 59  AVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 117

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +AV   H +G++HRDLKPEN  + S D+++ + ++DFG + + + 
Sbjct: 118 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 6e-36
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   + LG G +G   L     T    A K +  K  +   EN   I++EI I ++L+ 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN- 61

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
             N+V+      +    ++ +E C GG+LFDRI       E DA      ++  V   H 
Sbjct: 62  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           +G+ HRD+KPEN      D+   LK++DFG A +F     E   +   
Sbjct: 122 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMC 166

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 2e-35
 Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 5/168 (2%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            + FG++LG G F    L  E +T+  YA K + +K  +        + RE  +   L  
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKIL-EKRHIIKENKVPYVTRERDVMSRLD- 66

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P  V+L    +D+  ++  +   + G+L   I   G + E         IV+A+   H 
Sbjct: 67  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
            G++HRDLKPEN      +++  +++TDFG+A +   E  +A  ++ V
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFV 171

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 3e-35
 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 5/158 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +  GR LG+G+FG  YL  E  +    A K +  K +++ A  +  +RRE++I+  L  
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSHLR- 64

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            PNI+ L     D T V++++E    G ++  +     + E+  A  +  + NA++ CHS
Sbjct: 65  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 124

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             V+HRD+KPEN           LK+ DFG ++     
Sbjct: 125 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS 159

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  131 bits (330), Expect = 4e-35
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 7/160 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           +Y     LG G FGV + C E +T   +  K +       Y  +   ++ EI I   L  
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFI----NTPYPLDKYTVKNEISIMNQLH- 84

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCH 144
            P ++ L  A ED+  + +++E   GG+LFDRI A+ Y  SE +    +R     +   H
Sbjct: 85  HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 144

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
              ++H D+KPEN         + +K+ DFG A     + 
Sbjct: 145 EHSIVHLDIKPENI-MCETKKASSVKIIDFGLATKLNPDE 183

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 3e-34
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y     LGRG FG+ + C E S+   Y  K +  K       + +++++EI I  +   
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-----DQVLVKKEISILNIAR- 59

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCH 144
             NI+ L  + E    + ++ E   G D+F+RI    +  +ER+    +  +  A+   H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
           S  + H D++PEN        ++ +K+ +FG A   +
Sbjct: 120 SHNIGHFDIRPENI-IYQTRRSSTIKIIEFGQARQLK 155

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 1e-33
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)

Query: 30  GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
            ++LG G  G         T   +A K +   P           RRE+++    S  P+I
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP---------KARREVELHWRASQCPHI 67

Query: 90  VELKSAHED----ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
           V +   +E+       + +VME   GG+LF RI  +G   ++ER+A+ ++++I  A+   
Sbjct: 68  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 127

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           HS+ + HRD+KPEN  + S+  NA+LK+TDFG A       
Sbjct: 128 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 168

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  126 bits (317), Expect = 3e-33
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS- 84
            +S  R++GRG FG  Y C +  T   YA K + KK ++K  + + +   E  +  L+S 
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-RIKMKQGETLALNERIMLSLVST 63

Query: 85  -GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
              P IV +  A      +  +++L  GGDL   +   G +SE D       I+  +   
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRR 202
           H+  V++RDLKP N      D++  ++++D G A  F ++   AS  T   +  +  ++
Sbjct: 124 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 179

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  124 bits (313), Expect = 4e-33
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           +D    +S  R +G G FG  Y   +   +   A K M      +  E    I +E++  
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFL 69

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           + L   PN ++ +  +  E    +VME C G       + K    E + A V    +  +
Sbjct: 70  QKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
              HS  ++HRD+K  N   I   +  L+K+ DFGSA +   
Sbjct: 129 AYLHSHNMIHRDVKAGN---ILLSEPGLVKLGDFGSASIMAP 167

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 2e-32
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     LG G  GV +  +   + +  A K +  + K         I RE+Q+    + 
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN---QIIRELQVLHECN- 62

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P IV    A   +  + + ME   GG L   +   G   E+    V  A++  +     
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122

Query: 146 M-GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
              +MHRD+KP N      +    +K+ DFG +    + 
Sbjct: 123 KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS 158

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 2e-32
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +     LG G FG  Y      T++  A K +  K + +  +       EI I      
Sbjct: 13  FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED----YMVEIDILASCD- 67

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIVNAVNVCH 144
            PNIV+L  A   E  + +++E C GG +   ++  +   +E     V +  ++A+N  H
Sbjct: 68  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 127

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
              ++HRDLK  N  F     +  +K+ DFG +       
Sbjct: 128 DNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTI 164

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 6e-32
 Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 9/168 (5%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
            D    Y+    +G+G  G  Y   + +T    A + M     ++      +I  EI + 
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVM 71

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
           R     PNIV    ++     + VVME   GG L D ++ +    E   A V R  + A+
Sbjct: 72  RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129

Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
              HS  V+HRD+K +N   I    +  +K+TDFG       E  + S
Sbjct: 130 EFLHSNQVIHRDIKSDN---ILLGMDGSVKLTDFGFCAQITPEQSKRS 174

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 7e-31
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 4/151 (2%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           +   +MLG+G FG  +L     TN  +A K++ KK  +   ++      E ++  L    
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 87  PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
           P +  +    + +  +  VME   GGDL   I +   +    A      I+  +   HS 
Sbjct: 63  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 122

Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           G+++RDLK +N   I  D +  +K+ DFG  
Sbjct: 123 GIVYRDLKLDN---ILLDKDGHIKIADFGMC 150

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 2e-30
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 6/162 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRL 82
            Y  G +LG G FG  Y     S N+P A K + K     + E  N   +  E+ + +++
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGG-DLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            SG   ++ L    E   +  +++E  +   DLFD I  +G   E  A      ++ AV 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            CH+ GV+HRD+K EN       +   LK+ DFGS  L ++ 
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDT 164

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 2e-30
 Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 17/173 (9%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y     +G G +G        S       K +      +      M+  E+ + R L   
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELK-H 62

Query: 87  PNIVELKSAHEDET--AVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAV 140
           PNIV       D T   +++VME C+GGDL   I      + Y  E     V+  +  A+
Sbjct: 63  PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122

Query: 141 NVCHSMG-----VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
             CH        V+HRDLKP N   +  D    +K+ DFG A +   +   A 
Sbjct: 123 KECHRRSDGGHTVLHRDLKPAN---VFLDGKQNVKLGDFGLARILNHDTSFAK 172

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 7e-30
 Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 6/166 (3%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
           E+V  +Y  G  LG G+F V   C E ST + YA K + KK + K +   +    I RE+
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREV 64

Query: 78  QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
            I + +   PN++ L   +E++T V +++EL  GG+LFD +  K   +E +A   L+ I+
Sbjct: 65  SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDD-NALLKVTDFGSALLFEE 182
           N V   HS+ + H DLKPEN   + R+     +K+ DFG A   + 
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  112 bits (282), Expect = 4e-29
 Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  G +LG G     +L  +   +   A K + +    +     +  RRE Q    L+ 
Sbjct: 8   RYELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALN- 65

Query: 86  QPNIVELKSAHEDETA----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
            P IV +    E ET      ++VME   G  L D +  +G  + + A  V+     A+N
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
             H  G++HRD+KP N           +KV DFG A    + G   +   +VI
Sbjct: 126 FSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 175

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 4e-29
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 11/169 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
             + G+ +G G FG  Y    +      A K +         +     + E+ + R    
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKML--NVTAPTPQQLQAFKNEVGVLRKTR- 62

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCH 144
             NI+     +     + +V + C+G  L+  + I +  +       + R     ++  H
Sbjct: 63  HVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           +  ++HRDLK  N   I   ++  +K+ DFG A +     G    +   
Sbjct: 122 AKSIIHRDLKSNN---IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  113 bits (283), Expect = 4e-29
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 6/162 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y  GR +G G FG  YL T+ +     A K    K K         +  E +I +++ G
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP------QLHIESKIYKMMQG 61

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
              I  ++    +     +VMEL               +S +    +   +++ +   HS
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
              +HRD+KP+NF         L+ + DFG A  + +     
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 2e-28
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            + + ++LG+G FG   L  E +T   YA K + +K  +   +       E ++ +    
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-RKEVIIAKDEVAHTVTESRVLQNTR- 63

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P +  LK A +    +  VME   GG+LF  +  +  ++E  A      IV+A+   HS
Sbjct: 64  HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
             V++RD+K EN      D +  +K+TDFG       +G
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-28
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 7   KSQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPK 63
           K + +   + G   +  + ++   ++LG G +G  +L    + + T   YA K + K   
Sbjct: 6   KHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI 65

Query: 64  MKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY 123
           ++ A+     R E Q+   +   P +V L  A + ET +H++++   GG+LF  +  +  
Sbjct: 66  VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER 125

Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           ++E +    +  IV A+   H +G+++RD+K EN      D N  + +TDFG +  F  +
Sbjct: 126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVAD 182

Query: 184 GGE 186
             E
Sbjct: 183 ETE 185

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 6e-28
 Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 28/193 (14%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
           +  FG++LG G FG     T    +       +A K   +   +     +  E+++   L
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK---------------------- 121
               NIV L  A      ++++ E C  GDL + + +K                      
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 122 -GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
               +  D       +   +        +HRDL   N   +      ++K+ DFG A   
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN---VLVTHGKVVKICDFGLARDI 214

Query: 181 EEEGGEASDDTSV 193
             +        + 
Sbjct: 215 MSDSNYVVRGNAR 227

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  109 bits (272), Expect = 2e-27
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 5/158 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            +   R LG G FG  +L         YA K + KK  +   +       E  +  +++ 
Sbjct: 5   DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-KKEIVVRLKQVEHTNDERLMLSIVT- 62

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P I+ +    +D   + ++M+  +GG+LF  +     +    A      +  A+   HS
Sbjct: 63  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             +++RDLKPEN   I  D N  +K+TDFG A    + 
Sbjct: 123 KDIIYRDLKPEN---ILLDKNGHIKITDFGFAKYVPDV 157

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 3e-27
 Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 11/163 (6%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
             F   +GRG F   Y   +  T +  A   +  +   K        + E ++ + L   
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQRFKEEAEMLKGLQ-H 67

Query: 87  PNIVELKSAHED----ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           PNIV    + E     +  + +V EL   G L   +        +      R I+  +  
Sbjct: 68  PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF 127

Query: 143 CHSMG--VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            H+    ++HRDLK +N           +K+ D G A L    
Sbjct: 128 LHTRTPPIIHRDLKCDNIFI--TGPTGSVKIGDLGLATLKRAS 168

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 7e-27
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 20/165 (12%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
           Y+  +++G G FGV Y      +    A K + +  + K         RE+QI R L   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD-H 72

Query: 87  PNIVELK------SAHEDETAVHVVMELCQGG---DLFDRIIAKGYYSERDAAPVLRAIV 137
            NIV L+         +DE  +++V++               AK           +  + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
            ++   HS G+ HRD+KP+N       D A+LK+ DFGSA     
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVR 175

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  107 bits (267), Expect = 1e-26
 Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
            Y   R LGRG++   +     + N     K +    K K       I+REI+I   L G
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-------IKREIKILENLRG 88

Query: 86  QPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
            PNI+ L    +D  +    +V E     D           ++ D    +  I+ A++ C
Sbjct: 89  GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 145

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           HSMG+MHRD+KP N       ++  L++ D+G A  +   
Sbjct: 146 HSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPG 183

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (264), Expect = 2e-26
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 5/174 (2%)

Query: 21  EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
           E  +      +++G G FG                 ++         +       E  I 
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNA 139
                 PN++ L+      T V ++ E  + G L   +    G ++      +LR I   
Sbjct: 82  GQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140

Query: 140 VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           +     M  +HRDL   N      + N + KV+DFG +   E++  + +  +++
Sbjct: 141 MKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 191

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 2e-26
 Identities = 40/182 (21%), Positives = 59/182 (32%), Gaps = 29/182 (15%)

Query: 26  HYSFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
             SFG+ LG G FG     T     ++   M  A K +     +   E    +  E+++ 
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE---ALMSELKVL 80

Query: 81  RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY----------------- 123
             L    NIV L  A        V+ E C  GDL + +  K                   
Sbjct: 81  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140

Query: 124 -YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
                D       +   +    S   +HRDL   N   I      + K+ DFG A   + 
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLARDIKN 197

Query: 183 EG 184
           + 
Sbjct: 198 DS 199

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (262), Expect = 3e-26
 Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
             +    LG G++G  Y       ++  A K++ K+  M+  E      +E  + + +  
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEE----FLKEAAVMKEIK- 71

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVNAVNVC 143
            PN+V+L      E   +++ E    G+L D +        S      +   I +A+   
Sbjct: 72  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRM 203
                +HRDL   N       +N L+KV DFG + L   +   A       ++      +
Sbjct: 132 EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 188

Query: 204 SKLKKLTVKVIV 215
           +   K ++K  V
Sbjct: 189 AY-NKFSIKSDV 199

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 3e-26
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 5/154 (3%)

Query: 31  RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN-DMMIRREIQIRRLLSGQPNI 89
             LG G+F   Y   + +TN   A K +    + +  +  +    REI++ + LS  PNI
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 62

Query: 90  VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
           + L  A   ++ + +V +  +              +       +   +  +   H   ++
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           HRDLKP N   +  D+N +LK+ DFG A  F   
Sbjct: 123 HRDLKPNN---LLLDENGVLKLADFGLAKSFGSP 153

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  104 bits (261), Expect = 4e-26
 Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 8/164 (4%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
           HY  GR +G G FGV +  T    N   A K   ++       +   +R E +  +LL+G
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKLLAG 59

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
              I  +    ++     +V++L          +    +S +  A   + ++  V   H 
Sbjct: 60  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 119

Query: 146 MGVMHRDLKPENFCF--ISRDDNALLKVTDFGSALLFEEEGGEA 187
             +++RD+KP+NF     +  +  ++ V DFG    + +   + 
Sbjct: 120 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 163

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 9e-26
 Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 22  DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
           DV   Y+    +G G +G+     +N   +  A K ++      Y +      REI+I  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR---TLREIKILL 61

Query: 82  LLSGQPNIVELKSAHEDETAVHV----VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
                 NI+ +       T   +    ++    G DL+  ++   + S       L  I+
Sbjct: 62  RFR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICYFLYQIL 119

Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
             +   HS  V+HRDLKP N      +    LK+ DFG A + + +       T  +
Sbjct: 120 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYV 173

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 1e-25
 Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
           P+ D +  Y     +G+G FG  +      T    A K +  + + +     +   REI+
Sbjct: 4   PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIK 61

Query: 79  IRRLLSGQPNIVELKSA--------HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
           I +LL    N+V L           +  + ++++V + C+             ++  +  
Sbjct: 62  ILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 120

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            V++ ++N +   H   ++HRD+K  N   I+RD    LK+ DFG A  F   
Sbjct: 121 RVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGV--LKLADFGLARAFSLA 170

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 8e-25
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 33  LGRGRFGVTYLCT--ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
           LG G FG             +  A K + +  +    E    + RE QI   L   P IV
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE---MMREAQIMHQLD-NPYIV 72

Query: 91  ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVM 149
            L    + E  + +VME+  GG L   ++ K       + A +L  +   +        +
Sbjct: 73  RLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 131

Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           HRDL   N       +    K++DFG +     +    +  ++ 
Sbjct: 132 HRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAG 172

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (254), Expect = 9e-25
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           +  +   + LG G FG   L     +   YA K +  K K+   +       E +I + +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
           +  P +V+L+ + +D + +++VME   GG++F  +   G +SE  A      IV      
Sbjct: 99  N-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           HS+ +++RDLKPEN   +  D    ++VTDFG A
Sbjct: 158 HSLDLIYRDLKPEN---LLIDQQGYIQVTDFGFA 188

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 6/161 (3%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y     +G G +G  +      T+   A K +      +   +     REI + + L
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS--ALREICLLKEL 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
               NIV L      +  + +V E C            G          L  ++  +  C
Sbjct: 59  KH-KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           HS  V+HRDLKP+N       +    K+ +FG A  F    
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPV 155

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 3e-24
 Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 26/182 (14%)

Query: 12  RYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM 71
            YP+L   + D      F  ++G G FG           +      + +  +    ++  
Sbjct: 3   IYPVL--DWND----IKFQDVIGEGNFGQVLKARIKKDGLRMDAA-IKRMKEYASKDDHR 55

Query: 72  MIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI------------- 118
               E+++   L   PNI+ L  A E    +++ +E    G+L D +             
Sbjct: 56  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 115

Query: 119 ---IAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
                    S +        +   ++       +HRDL   N       +N + K+ DFG
Sbjct: 116 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFG 172

Query: 176 SA 177
            +
Sbjct: 173 LS 174

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 5e-24
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
                + +G+G FG   L          A K +      +          E  +   L  
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQ------AFLAEASVMTQLR- 58

Query: 86  QPNIVELKSA-HEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVLRAIVNAVNV 142
             N+V+L     E++  +++V E    G L D + ++G               +  A+  
Sbjct: 59  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
                 +HRDL   N       ++ + KV+DFG  
Sbjct: 119 LEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT 150

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 9e-24
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 13/159 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
                  LG G+FG  ++   N  +   A KS+ +      + +      E  + + L  
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-----SMSPDAFLAEANLMKQLQ- 66

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY--SERDAAPVLRAIVNAVNVC 143
              +V L +    E  ++++ E  + G L D +        +      +   I   +   
Sbjct: 67  HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
                +HRDL+  N            K+ DFG A L E+
Sbjct: 126 EERNYIHRDLRAANILVSDTLSC---KIADFGLARLIED 161

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 2e-23
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 11/160 (6%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
             +F + LG G+FGV             A K + +      + ++     E ++   LS 
Sbjct: 5   DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEG-----SMSEDEFIEEAKVMMNLS- 57

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIVNAVNVCH 144
              +V+L      +  + ++ E    G L + +   +  +  +    + + +  A+    
Sbjct: 58  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           S   +HRDL   N      +D  ++KV+DFG +    ++ 
Sbjct: 118 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 154

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 96.9 bits (240), Expect = 2e-23
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 7/161 (4%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M  Y     +G G +GV Y   +N+    +A K +  + + +         REI I + L
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKI--RLEKEDEGIPSTTIREISILKEL 57

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
               NIV+L      +  + +V E           + +G      A   L  ++N +  C
Sbjct: 58  K-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           H   V+HRDLKP+N      +    LK+ DFG A  F    
Sbjct: 117 HDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 4e-23
 Identities = 34/172 (19%), Positives = 55/172 (31%), Gaps = 10/172 (5%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTN---MPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
                  LG G FGV      ++ +   +  A K + K   +   E      RE+     
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHS 67

Query: 83  LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVN 141
           L    N++ L         + +V EL   G L DR+    G++     +     +   + 
Sbjct: 68  LD-HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125

Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
              S   +HRDL   N          L+K+ DFG      +           
Sbjct: 126 YLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.6 bits (237), Expect = 7e-23
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 31  RMLGRGRFGVTYLCT--ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN 88
           + LG G FG                A K +  +      +++  +  E  + + L   P 
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLD-NPY 69

Query: 89  IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
           IV +    E E+   +VME+ + G L   +    +  +++   ++  +   +        
Sbjct: 70  IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 128

Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
           +HRDL   N   +++      K++DFG +     +       T  
Sbjct: 129 VHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHG 170

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.2 bits (236), Expect = 9e-23
 Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 6/160 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
               GR +G G+FG  +     S   P    ++                +E    R    
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD- 66

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH 144
            P+IV+L     +   V ++MELC  G+L   +  +               +  A+    
Sbjct: 67  HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           S   +HRD+   N   +    N  +K+ DFG +   E+  
Sbjct: 126 SKRFVHRDIAARN---VLVSSNDCVKLGDFGLSRYMEDST 162

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 1e-22
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
             +F + +G G+FG+ +L          A K++ +      A ++     E ++   LS 
Sbjct: 6   ELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREG-----AMSEEDFIEEAEVMMKLS- 58

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCH 144
            P +V+L     ++  + +V E  + G L D +  +   ++      +   +   +    
Sbjct: 59  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
              V+HRDL   N       +N ++KV+DFG
Sbjct: 119 EACVIHRDLAARN---CLVGENQVIKVSDFG 146

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 2e-22
 Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 6/161 (3%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
             +  +++G G FG  Y     +++         K  K  Y E   +    E  I    S
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 85  GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVC 143
              NI+ L+        + ++ E  + G L   +  K G +S      +LR I   +   
Sbjct: 68  -HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            +M  +HRDL   N      + N + KV+DFG + + E++ 
Sbjct: 127 ANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDP 164

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 3e-22
 Identities = 31/168 (18%), Positives = 51/168 (30%), Gaps = 5/168 (2%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK-PKMKYAENDMMIRREIQIRRLLSG 85
           +   ++LG G FG  Y                 K+  +    + +  I  E  +   +  
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
            P++  L       T   +   +  G  L      K     +        I   +N    
Sbjct: 70  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129

Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
             ++HRDL   N           +K+TDFG A L   E  E   +   
Sbjct: 130 RRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 4e-22
 Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 13/159 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
                  LG+G FG  ++ T N T    A K++          +     +E Q+ + L  
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPG-----TMSPEAFLQEAQVMKKLR- 70

Query: 86  QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
              +V+L +   +E  +++V E    G L D +  +   Y        +   I + +   
Sbjct: 71  HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 129

Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
             M  +HRDL+  N   I   +N + KV DFG A L E+
Sbjct: 130 ERMNYVHRDLRAAN---ILVGENLVCKVADFGLARLIED 165

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.0 bits (230), Expect = 7e-22
 Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 7/162 (4%)

Query: 24  MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
           M ++     +G G +GV Y      T    A K +  +   +         REI + + L
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 58

Query: 84  SGQPNIVELKSAHEDETAVHVVMELC-QGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
           +  PNIV+L      E  +++V E   Q    F    A            L  ++  +  
Sbjct: 59  N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117

Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
           CHS  V+HRDLKP+N      +    +K+ DFG A  F    
Sbjct: 118 CHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPV 156

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 9e-22
 Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 14/174 (8%)

Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           + K   +V   Y   + +G G +G      +  T    A K + +  + +         R
Sbjct: 9   VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE--LFAKRAYR 66

Query: 76  EIQIRRLLSGQPNIVELKSAHEDE------TAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
           E+++ + +    N++ L      +      T  ++VM     G    +++      E   
Sbjct: 67  ELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRI 123

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
             ++  ++  +   H+ G++HRDLKP N      +++  LK+ DFG A   + E
Sbjct: 124 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADSE 174

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 1e-21
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 23/179 (12%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA---KKPKMKYAENDM-MIRREIQIRR 81
               G+ LG G FG   L      +     +      K  K    E D+  +  E+++ +
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 82  LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRI----------------IAKGYYS 125
           ++    NI+ L  A   +  ++V++E    G+L + +                  +   S
Sbjct: 74  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 126 ERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
            +D       +   +    S   +HRDL   N       ++ ++K+ DFG A       
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 189

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.9 bits (227), Expect = 3e-21
 Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 15/174 (8%)

Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           +G     V+  Y   + +G G  G+     +   +   A K +      +   +     R
Sbjct: 8   VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYR 65

Query: 76  EIQIRRLLSGQPNIVEL------KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
           E+ + + ++   NI+ L      +   E+   V++VMEL            +        
Sbjct: 66  ELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 121

Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
           + +L  ++  +   HS G++HRDLKP N        +  LK+ DFG A      
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTS 172

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 9e-21
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 22/187 (11%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
               G+ LGRG FG          +    C+++A K   +         +  E++I   +
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 84  SGQPNIVELKSA-HEDETAVHVVMELCQGGDLFDRI----------------IAKGYYSE 126
               N+V L  A  +    + V++E C+ G+L   +                + K + + 
Sbjct: 74  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133

Query: 127 RDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE 186
                    +   +    S   +HRDL   N   I   +  ++K+ DFG A    ++   
Sbjct: 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIYKDPDY 190

Query: 187 ASDDTSV 193
                + 
Sbjct: 191 VRKGDAR 197

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.8 bits (219), Expect = 2e-20
 Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 30/194 (15%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
           +  + R +G G FG  +               +A K   +   A+     +RE  +    
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY------------------- 124
              PNIV+L         + ++ E    GDL + + +   +                   
Sbjct: 74  D-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 125 -----SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
                S  +   + R +   +        +HRDL   N       +N ++K+ DFG +  
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRN 189

Query: 180 FEEEGGEASDDTSV 193
                   +D    
Sbjct: 190 IYSADYYKADGNDA 203

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 2e-20
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 12/173 (6%)

Query: 16  LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
           L K   +V   Y     +G G +G      +  T +  A K +      +   +     R
Sbjct: 9   LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL--SRPFQSIIHAKRTYR 66

Query: 76  EIQIRRLLSGQPNIVELKSAHEDETAVH-----VVMELCQGGDLFDRIIAKGYYSERDAA 130
           E+++ + +    N++ L        ++       ++    G D  + I+     ++    
Sbjct: 67  ELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQ 124

Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
            ++  I+  +   HS  ++HRDLKP N      +++  LK+ DFG A   ++E
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDE 174

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 4e-20
 Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 22/177 (12%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
                 +G+GRFG  +           A K  + +      E       EI    +L   
Sbjct: 5   IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLR-H 56

Query: 87  PNIVELKSAHEDE----TAVHVVMELCQGGDLFDRIIAKGYYSER-------DAAPVLRA 135
            NI+   +A   +    T + +V +  + G LFD +       E         A+ +   
Sbjct: 57  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 116

Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
            +  V       + HRDLK +N        N    + D G A+  +          +
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPN 170

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 6e-20
 Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 14/166 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTE-NSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
            Y     +G G +G  +   +  +     A K +  + +       +   RE+ + R L 
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLE 65

Query: 85  GQ--PNIVELK-----SAHEDETAVHVVMELCQGGDL-FDRIIAKGYYSERDAAPVLRAI 136
               PN+V L      S  + ET + +V E        +   + +          ++  +
Sbjct: 66  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
           +  ++  HS  V+HRDLKP+N   I    +  +K+ DFG A ++  
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQN---ILVTSSGQIKLADFGLARIYSF 168

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 2e-19
 Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 14/179 (7%)

Query: 19  PYEDVMLHYSFGRMLGRGRFGVTYLCT---ENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
               +++H  F  ++GRG FG  Y  T    +   +  A KS+ +   +           
Sbjct: 23  GPSSLIVH--FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---FLT 77

Query: 76  EIQIRRLLSGQPNIVELKSAH-EDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVL 133
           E  I +  S  PN++ L       E +  VV+   + GDL + I  + +  + +D     
Sbjct: 78  EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 136

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
             +   +    S   +HRDL   N      D+   +KV DFG A    ++  ++  + +
Sbjct: 137 LQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKT 192

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 7e-19
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 16/180 (8%)

Query: 26  HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
             +  R LG+G FG+ Y               +A K   +       +    E  + +  
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 84  SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY----------YSERDAAPVL 133
           +   ++V L           V+MEL   GDL   + +              S      + 
Sbjct: 81  NC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
             I + +   ++   +HRDL   N       ++  +K+ DFG      E          +
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 73.0 bits (178), Expect = 3e-16
 Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 20/164 (12%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           E L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG
Sbjct: 1   EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60

Query: 276 AIDYTEFTAA-TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
            ID+ EF +    + ++ +  E L +AF+ FD+D +G      +                
Sbjct: 61  TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAEL---------------- 104

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
              +  + N  +    + + +++ + DIDG+G+I++ EFV +M 
Sbjct: 105 ---RHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+     +AF  FDKD  G                ++        +    N  +    +M
Sbjct: 6   EQIAEFKEAFALFDKDGDGT---------------ITTKELGTVMRSLGQNPTEAELQDM 50

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELET 411
           + ++    D DGNG IDF EF++LM   + + ++ E L +AF+  D++ +  I+  EL  
Sbjct: 51  INEV----DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 106

Query: 412 AFKE-NNMGDDATIKEIISEVGRDH 435
                     D  + E+I E   D 
Sbjct: 107 VMTNLGEKLTDDEVDEMIREADIDG 131

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.7 bits (182), Expect = 2e-15
 Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 17/186 (9%)

Query: 13  YPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM-KYAEND 70
           +P   G+PY+D    Y   R LG G F   +L  +   N   A K +       + AE++
Sbjct: 2   HPAFKGEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDE 59

Query: 71  MMIRREIQ----IRRLLSGQPNIVELKSAHED--ETAVHVVMELCQGG---DLFDRIIAK 121
           + + + +      +    G  +I++L           VHVVM     G       +    
Sbjct: 60  IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 119

Query: 122 GYYSERDAAPVLRAIVNAVN-VCHSMGVMHRDLKPENFCFISRDDN---ALLKVTDFGSA 177
                     + + ++  ++ +    G++H D+KPEN      D       +K+ D G+A
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 179

Query: 178 LLFEEE 183
             ++E 
Sbjct: 180 CWYDEH 185

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 12/178 (6%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 261
           SKL+   ++ ++E       E Q   + F  +    +G LS +E +              
Sbjct: 2   SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 59

Query: 262 -VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVE 320
             + +    D +G+G ID+ EF  A     + +  + L  AF  +D D +GY        
Sbjct: 60  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGY-------I 112

Query: 321 SPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           S   +  +                 +       +K+  Q D + +G +   EF+    
Sbjct: 113 SKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.1 bits (111), Expect = 7e-07
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 20/151 (13%)

Query: 198 KQFRRMSKLKKLTVKVIVEYL-----PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           K F R      L+++   +        G+ ++  +  F   D + +GT+ + E    L+ 
Sbjct: 28  KGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV 87

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS------------EYLSK 300
                 E  +K      D+DGNG I   E         K+  S            +   K
Sbjct: 88  TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEK 147

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNV 328
            F+  D +  G    +EF    +S  +I  +
Sbjct: 148 IFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 178

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 13/97 (13%)

Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
             + +    D +G+G IDF EF+  ++   + +  + L+ AF   D + + +I+  E+  
Sbjct: 60  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 119

Query: 412 AFK-------------ENNMGDDATIKEIISEVGRDH 435
             +             E+    +   ++I  ++  + 
Sbjct: 120 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR 156

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 4e-15
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 261
           SKLK   V+ +    Y   +E Q   + F  +    +G L     +    +         
Sbjct: 3   SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 60

Query: 262 -VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
               +    D + +G I+++EF  A     +    E L  AF+ +D DN GY   +E   
Sbjct: 61  FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 120

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +V++   +   +    ++       NT + R   +   +    D + +G +   EF    
Sbjct: 121 IVDAIYQMVGNTVELPEE------ENTPEKRVDRIFAMM----DKNADGKLTLQEFQEGS 170

Query: 378 TDIYKLETPELLEKAFQYLDK 398
                   P ++ +A    D 
Sbjct: 171 -----KADPSIV-QALSLYDG 185

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 16/70 (22%), Positives = 29/70 (41%)

Query: 349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
                  +    D + +G I+F EF+  ++   +    E L  AF+  D ++D +IT NE
Sbjct: 58  PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE 117

Query: 409 LETAFKENNM 418
           +         
Sbjct: 118 MLDIVDAIYQ 127

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 67.7 bits (165), Expect = 7e-15
 Identities = 40/76 (52%), Positives = 54/76 (71%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM 271
           K + E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 272 DGNGAIDYTEFTAATI 287
           D +G IDY EF AAT+
Sbjct: 71  DKSGTIDYGEFIAATV 86

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 21/106 (19%)

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
            +G ID  +   A  +R   E    L + F+  D DNSG                   I 
Sbjct: 2   SSGHIDDDDKHMA--ERLSEEEIGGLKELFKMIDTDNSGT------------------IT 41

Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
            D+ K   L         + +K L+   DID +G ID+ EF+    
Sbjct: 42  FDELKDG-LKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV 86

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 11/88 (12%)

Query: 237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA---ADMDGNGAIDYTEFTAATIQRQKLE 293
            +G +  D+       +   L+E ++  L E     D D +G I + E      +     
Sbjct: 2   SSGHIDDDD-----KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56

Query: 294 RSEYLSKAFQYFDKDNSG---YDEFRAM 318
               +       D D SG   Y EF A 
Sbjct: 57  MESEIKDLMDAADIDKSGTIDYGEFIAA 84

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.3 bits (171), Expect = 8e-15
 Identities = 34/173 (19%), Positives = 70/173 (40%), Gaps = 15/173 (8%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            + Q   +KF  ++   +GTL   E +       +      V+ +  A D +G+  ID+ 
Sbjct: 21  AQLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 78

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAK 337
           E+ AA     +      L   F+ +DKD +G     E   +VES   ++    +  +  +
Sbjct: 79  EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 138

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLE 390
           +  L   ++     ++ ++ L  D +G+G +   EFV             +++
Sbjct: 139 QGKLLTPEE-----VVDRIFLLVDENGDGQLSLNEFVEGA-----RRDKWVMK 181

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.8 bits (170), Expect = 1e-14
 Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 18/180 (10%)

Query: 204 SKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EF 260
           SKL K  +  + +  Y    E Q   + F  +    +G L+ ++      +     + E 
Sbjct: 6   SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63

Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRA 317
               L    D D NG I + EF        +    E LS AF+ +D ++ GY   DE   
Sbjct: 64  FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123

Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +V S   +        +         T + R   + K +    D + +G I   EF    
Sbjct: 124 IVASVYKMMGSMVTLNEDEA------TPEMRVKKIFKLM----DKNEDGYITLDEFREGS 173

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 23/169 (13%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
            +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71

Query: 276 AIDYTEFTAATIQRQ----KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
            ID+ EF    +++     K +  E L+  F+ FDK+  G+                  I
Sbjct: 72  TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGF------------------I 113

Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
             ++  +     T +      ++ L+   D + +G IDF EF+ +M  +
Sbjct: 114 DIEELGEIL-RATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 18/157 (11%)

Query: 255 SMLTEFDVKQLMEA---ADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
           + L+E  + +   A    D DG G I   E         +    E L    +  D+D SG
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71

Query: 312 YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI 371
             +F   +               + +         FR            D + +G ID  
Sbjct: 72  TIDFEEFLVMMVRQMKEDAKGKSEEEL-----ANCFRIF----------DKNADGFIDIE 116

Query: 372 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
           E   ++    +  T E +E   +  DKN+D  I  +E
Sbjct: 117 ELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 32/164 (19%)

Query: 285 ATIQRQKLERSEYLS--------KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           A++  Q+ E   +LS         AF  FD D  G    + +                  
Sbjct: 1   ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKEL------------------ 42

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT----DIYKLETPELLEKA 392
               +    Q      L  ++ + D DG+G IDF EF+ +M     +  K ++ E L   
Sbjct: 43  -GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANC 101

Query: 393 FQYLDKNSDQFITVNELETAFKE-NNMGDDATIKEIISEVGRDH 435
           F+  DKN+D FI + EL    +       +  I++++ +  +++
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN 145

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 2e-14
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 20/158 (12%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           E+ Q ++E F   D D  GT+   EL+  +  +G    + ++K+++   D +G G +++ 
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62

Query: 281 EFTAATIQR-QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
           +F     Q+  + +  E + KAF+ FD D +G   F+ +                  K+ 
Sbjct: 63  DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA--------------KEL 108

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           G   T +      L++++ + D DG+G +   EF+ +M
Sbjct: 109 GENLTDE-----ELQEMIDEADRDGDGEVSEQEFLRIM 141

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 3e-05
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+ + + +AF  FD D +G  + + +  + + +                           
Sbjct: 3   EQKQEIREAFDLFDADGTGTIDVKELKVAMRAL-------------------GFEPKKEE 43

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIY-KLETPELLEKAFQYLDKNSDQFITVNELET 411
           +KK++ + D +G G ++F +F+ +MT    + +T E + KAF+  D +    I+   L+ 
Sbjct: 44  IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR 103

Query: 412 AFKENNMG-DDATIKEIISEVGRDH 435
             KE      D  ++E+I E  RD 
Sbjct: 104 VAKELGENLTDEELQEMIDEADRDG 128

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 67.9 bits (165), Expect = 5e-14
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 41/198 (20%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKQLMEAADMD 272
           +     +  F ++   ++  +S  EL+  L +V +   +           K +++  D D
Sbjct: 15  DIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDED 73

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
           G+G +   EF     +       +   K ++  D D SG        E  + +       
Sbjct: 74  GSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGT---MNSYEMRKALEEAGFKL 124

Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKA 392
                               L ++++    D    IDF  FV  +  +      E+L K 
Sbjct: 125 PC-----------------QLHQVIVARFADDELIIDFDNFVRCLVRL------EILFKI 161

Query: 393 FQYLDKNSDQFITVNELE 410
           F+ LD  +   I ++ + 
Sbjct: 162 FKQLDPENTGTIQLDLIS 179

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 37/137 (27%)

Query: 206 LKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY---------------------- 243
           L+++  K       G   +  K     +D D +G L                        
Sbjct: 43  LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDV 102

Query: 244 --------DELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS 295
                    E+R  L + G  L    + Q++ A   D    ID+  F    ++ + L   
Sbjct: 103 DRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVARFADDELIIDFDNFVRCLVRLEILF-- 159

Query: 296 EYLSKAFQYFDKDNSGY 312
               K F+  D +N+G 
Sbjct: 160 ----KIFKQLDPENTGT 172

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.8 bits (162), Expect = 5e-14
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 27/165 (16%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 4   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63

Query: 278 DYTEFTAA-TIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYT 333
           +++EF A  + Q +  +  + L +AF+ FDK+  G     E + ++ S       + +  
Sbjct: 64  EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV-- 121

Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                                  +L+   DG+G I+  +F  L++
Sbjct: 122 ---------------------DDMLREVSDGSGEINIQQFAALLS 145

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 21/141 (14%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+     +AF  FDKDN+G                   I + +             +   
Sbjct: 7   EQIAEFKEAFALFDKDNNGS------------------ISSSELATVMRSLGLSP-SEAE 47

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELET 411
           +  L+ + D+DGN  I+F EF+ LM+  +   ++ + L +AF+  DKN D  I+  EL+ 
Sbjct: 48  VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKH 107

Query: 412 AFKENNMG-DDATIKEIISEV 431
                     DA + +++ EV
Sbjct: 108 VLTSIGEKLTDAEVDDMLREV 128

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 70.4 bits (171), Expect = 5e-14
 Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 5/203 (2%)

Query: 211 VKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           ++     L  E+T  L++ F+      +G  S+ +L+  L K    + E  +K+L    +
Sbjct: 109 LRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE 168

Query: 271 MDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSH 330
            D  G + Y    A       L                   + E    +   +     + 
Sbjct: 169 NDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDAL 228

Query: 331 IYTDKAKKFGLGNTKQFRAMNMLKKLVLQG----DIDGNGNIDFIEFVNLMTDIYKLE-T 385
                  +       ++  + +   ++       D D +G +   E   ++ D +  E  
Sbjct: 229 FRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESA 288

Query: 386 PELLEKAFQYLDKNSDQFITVNE 408
            +  E  F  +D +  + ++  E
Sbjct: 289 RKKFEHQFSVVDVDDSKSLSYQE 311

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 46.5 bits (109), Expect = 3e-06
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 230 FIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           +   D DK+G LS +E++  L             +      D+D + ++ Y EF  
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 66.9 bits (162), Expect = 7e-14
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 24/174 (13%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F       ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 2   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61

Query: 271 MDGNGAIDYTEFTAATIQRQK----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
            DG+G +D+ EF    ++  K     +  E LS  F+ FDK+  GY     + E    ++
Sbjct: 62  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY---IDLEELKIMLQ 118

Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
                 T+                  +++L+  GD + +G ID+ EF+  M  +
Sbjct: 119 ATGETITED----------------DIEELMKDGDKNNDGRIDYDEFLEFMKGV 156

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 31/201 (15%), Positives = 58/201 (28%), Gaps = 45/201 (22%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMD 272
            PG+    L   F  +   ++G +  DEL+  LT+ G             + ++   D D
Sbjct: 1   FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
            +G + + EF                 + F  FD D SG     E +  +          
Sbjct: 60  MSGTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQELQKAL---------- 103

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
                         T     ++      +      NG I F +++     +        L
Sbjct: 104 --------------TTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKL------RAL 143

Query: 390 EKAFQYLDKNSDQFITVNELE 410
             +F+  D      +     +
Sbjct: 144 TDSFRRRDTAQQGVVNFPYDD 164

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 228 EKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI 287
           + FI  DTD++GT+   EL+  LT +G  L+   V  + +    +G   I + ++ A  +
Sbjct: 81  QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIACCV 138

Query: 288 QRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           + + L        +F+  D    G     YD+F   V
Sbjct: 139 KLRALT------DSFRRRDTAQQGVVNFPYDDFIQCV 169

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 47/201 (23%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF--------DVKQLMEAADMD 272
           E     K  F ++  D +  +S  EL+  L ++ S   +           + ++   D D
Sbjct: 17  EIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRD 75

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVS 329
           GNG +   EF     + +           F+ FD D SG     E R  +E+        
Sbjct: 76  GNGKLGLVEFNILWNRIRNYL------TIFRKFDLDKSGSMSAYEMRMAIEA-------- 121

Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
                            F+    L ++++    D    IDF  FV  +  +      E+L
Sbjct: 122 ---------------AGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL------EIL 160

Query: 390 EKAFQYLDKNSDQFITVNELE 410
            K F+ LD  +   I ++ + 
Sbjct: 161 FKIFKQLDPENTGTIQLDLIS 181

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 56.6 bits (136), Expect = 4e-10
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 227 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT 286
              F + D DK+G++S  E+R  +   G  L    + Q++ A   D    ID+  F    
Sbjct: 96  LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 154

Query: 287 IQRQKLERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
           ++ + L       K F+  D +N+G        + +  
Sbjct: 155 VRLEILF------KIFKQLDPENTGTIQLDLISWLSFS 186

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 38.2 bits (88), Expect = 9e-04
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 18/139 (12%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E  +     F     D+        M  S + ++ + +    K K             +M
Sbjct: 17  EIDDNFKTLFSKLAGDD--------MEISVKELQTILNRIISKHKDLRTNGFSLESCRSM 68

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
           +  +    D DGNG +  +EF  L   I            F+  D +    ++  E+  A
Sbjct: 69  VNLM----DRDGNGKLGLVEFNILWNRIRNYL------TIFRKFDLDKSGSMSAYEMRMA 118

Query: 413 FKENNMGDDATIKEIISEV 431
            +         + ++I   
Sbjct: 119 IEAAGFKLPCQLHQVIVAR 137

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 23/161 (14%)

Query: 27  YSFGRMLGRGRFGVTYLCTENSTNMPYACK------SMAKKPKMKYAENDMMIRREIQIR 80
            + G+++G G+    + C  +        K      +  KK K K    D+         
Sbjct: 2   DAIGKLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 81  RLLSGQPNIVELKSAHE----DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
                   + +L+              V+MEL    +L+            +   VL  I
Sbjct: 61  ARNE-FRALQKLQGLAVPKVYAWEGNAVLMELIDAKELY-------RVRVENPDEVLDMI 112

Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
           +  V   +  G++H DL   N           + + DF  +
Sbjct: 113 LEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQS 149

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 64.7 bits (156), Expect = 7e-13
 Identities = 67/162 (41%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
           E L  EE   LKE F  +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+D +G
Sbjct: 2   ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61

Query: 276 AIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
            IDY EF AAT+   KLER E L  AF YFDKD SGY                       
Sbjct: 62  TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGY--------------ITLDEIQQA 107

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
            K FGL           +  ++ + D D +G ID+ EF  +M
Sbjct: 108 CKDFGLD-------DIHIDDMIKEIDQDNDGQIDYGEFAAMM 142

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 62.2 bits (151), Expect = 1e-12
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 26/129 (20%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
              +L   D+K+ ++A  +   G+ ++ +F A    +        + K F+  D D SG+
Sbjct: 2   AKDLLKADDIKKALDA--VKAEGSFNHKKFFALVGLKAMSA--NDVKKVFKAIDADASGF 57

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              +E + +++S                        +       K  +   D DG+G I 
Sbjct: 58  IEEEELKFVLKS-------------------FAADGRDLTDAETKAFLKAADKDGDGKIG 98

Query: 370 FIEFVNLMT 378
             EF  L+ 
Sbjct: 99  IDEFETLVH 107

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 53.0 bits (127), Expect = 2e-09
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---GSMLTEFDVKQLMEAADMDGN 274
           L       +K+ F  +D D +G +  +EL+  L      G  LT+ + K  ++AAD DG+
Sbjct: 35  LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGD 94

Query: 275 GAIDYTEFTA 284
           G I   EF  
Sbjct: 95  GKIGIDEFET 104

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
            +   G+ +  +F  L+    K  +   ++K F+ +D ++  FI   EL+   K      
Sbjct: 17  AVKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG 74

Query: 420 ---DDATIKEIISEVGRDH 435
               DA  K  +    +D 
Sbjct: 75  RDLTDAETKAFLKAADKDG 93

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 46.4 bits (110), Expect = 4e-07
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE 293
                G+ ++ +  A +      ++  DVK++ +A D D +G I+  E            
Sbjct: 17  AVKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG 74

Query: 294 RS---EYLSKAFQYFDKDNSG---YDEFRAMVES 321
           R           +  DKD  G    DEF  +V  
Sbjct: 75  RDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 64.2 bits (155), Expect = 1e-12
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 40/188 (21%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNG 275
                 K  F  +D + NG +S DE+    + +      +   +    +    A   G G
Sbjct: 9   RWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG 68

Query: 276 A-----IDYTEFTAATIQRQKLERS-----------EYLSKAFQYFDKDNSGYDEFRAMV 319
                  D+  +     +    E              +    F   DKD +G        
Sbjct: 69  MKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGA------- 121

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
                       +    K  G+  +         ++     DID +G +D  E       
Sbjct: 122 -------ITLDEWKAYTKAAGIIQS-----SEDCEETFRVCDIDESGQLDVDEMTRQHLG 169

Query: 380 IYKLETPE 387
            +    P 
Sbjct: 170 FWYTMDPA 177

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 43.8 bits (102), Expect = 9e-06
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 262
             KL    ++   +  P          F  +D D+NG ++ DE +A     G + +  D 
Sbjct: 84  WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDC 143

Query: 263 KQLMEAADMDGNGAIDYTEFTAA 285
           ++     D+D +G +D  E T  
Sbjct: 144 EETFRVCDIDESGQLDVDEMTRQ 166

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.7 bits (154), Expect = 1e-12
 Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 15/171 (8%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD-VKQLMEAADMDGNGAIDY 279
            E Q L   F   +   +G ++ +  +    +             L  A D    G++ +
Sbjct: 13  RELQVLYRGF--KNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 70

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
            +F  A     +    E L   F  +D +  GY        + + + ++     D   K+
Sbjct: 71  EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI-------NKEEMMDIVKAIYDMMGKY 123

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLE 390
                K+      +     + D + +G +   EF+         E   ++ 
Sbjct: 124 TYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC-----QEDDNIMR 169

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.5 bits (112), Expect = 4e-07
 Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 20/155 (12%)

Query: 198 KQFRRMSKLKKLTVKVIVEYL-----PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
           + F+       +  +   +        G+ +      F   DT + G++ +++    L+ 
Sbjct: 20  RGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI 79

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS------------EYLSK 300
           +        ++      D++ +G I+  E          +               +++  
Sbjct: 80  LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDV 139

Query: 301 AFQYFDKDNSG---YDEFRAMVESPQTIRNVSHIY 332
            FQ  DK+  G    DEF    +    I     ++
Sbjct: 140 FFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLF 174

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 61.1 bits (148), Expect = 2e-12
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 26/125 (20%)

Query: 257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY---D 313
           L + DV   + A     +    + EF A      K    + + KAF   D+D SG+   D
Sbjct: 5   LKDADVAAALAACSAADS--FKHKEFFAKVGLASKSL--DDVKKAFYVIDQDKSGFIEED 60

Query: 314 EFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF 373
           E +  +++                      + +       K  +  GD DG+G I   EF
Sbjct: 61  ELKLFLQN-------------------FSPSARALTDAETKAFLADGDKDGDGMIGVDEF 101

Query: 374 VNLMT 378
             ++ 
Sbjct: 102 AAMIK 106

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 50.7 bits (121), Expect = 8e-09
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM---LTEFDVKQLMEAADMDGN 274
           L  +    +K+ F  +D DK+G +  DEL+  L         LT+ + K  +   D DG+
Sbjct: 34  LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93

Query: 275 GAIDYTEFTA 284
           G I   EF A
Sbjct: 94  GMIGVDEFAA 103

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 43.0 bits (101), Expect = 5e-06
 Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 10/95 (10%)

Query: 234 DTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL 292
                 +  + E      KVG +  +  DVK+     D D +G I+  E           
Sbjct: 16  ACSAADSFKHKEF---FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPS 72

Query: 293 ERS---EYLSKAFQYFDKDNSG---YDEFRAMVES 321
            R+             DKD  G    DEF AM+++
Sbjct: 73  ARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 107

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                 +    EF   +      ++ + ++KAF  +D++   FI  +EL+   +  +   
Sbjct: 16  ACSAADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 73

Query: 420 ---DDATIKEIISEVGRDH 435
               DA  K  +++  +D 
Sbjct: 74  RALTDAETKAFLADGDKDG 92

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 2e-12
 Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 38/187 (20%)

Query: 229 KFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
            +      ++G +  +EL+  LT+ G     S  +    + ++   D D  G + +  F 
Sbjct: 4   TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF- 62

Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGN 343
                ++         + F   D+D SG  E     E  Q I  + +  + +        
Sbjct: 63  -----KELWAALNAWKENFMTVDQDGSGTVEHH---ELRQAIGLMGYRLSPQTLTT---- 110

Query: 344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQF 403
                         +      NG I F ++V     +        L   F+  D      
Sbjct: 111 --------------IVKRYSKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQGS 150

Query: 404 ITVNELE 410
                 +
Sbjct: 151 ANFIYDD 157

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 6e-10
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 232 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK 291
            +D D +GT+ + ELR  +  +G  L+   +  +++    +G   I + ++ A  +    
Sbjct: 78  TVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVACCV---- 131

Query: 292 LERSEYLSKAFQYFDKDNSG-----YDEFRAMV 319
             +   L+  F+  D    G     YD+F    
Sbjct: 132 --KLRALTDFFRKRDHLQQGSANFIYDDFLQGT 162

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYL 396
            + G+  T    ++   + ++   D D  G + F  F  L   +   +        F  +
Sbjct: 26  TQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKEN------FMTV 79

Query: 397 DKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK 436
           D++    +  +EL  A           T+  I+    ++ +
Sbjct: 80  DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR 120

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 20/174 (11%)

Query: 221 EETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAID 278
            E +AL E F ++ +    +G ++ +E +  L K     + F   ++ +  D   NG + 
Sbjct: 14  SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF-ADRVFDLFDTKHNGILG 72

Query: 279 YTEFTAAT-IQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAK 337
           + EF  A  +        + +  +FQ +D    G+             R           
Sbjct: 73  FEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGF-----------IERQEVKQMVVATL 121

Query: 338 KFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEK 391
                N K     +++ K   + D   +G ID  E+ +L+     L  P LL+ 
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV-----LRHPSLLKN 170

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 60.0 bits (145), Expect = 5e-12
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 26/129 (20%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L   D+ + + A      G  DY  F      + K +    + + F+  DKD SG+
Sbjct: 2   MTKVLKADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTD--AQVKEVFEILDKDQSGF 57

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              +E + ++                    G     +       K L+  GD D +G I 
Sbjct: 58  IEEEELKGVL-------------------KGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98

Query: 370 FIEFVNLMT 378
             EF  ++ 
Sbjct: 99  ADEFAKMVA 107

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 51.9 bits (124), Expect = 4e-09
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGN 274
           L G+    +KE F  +D D++G +  +EL+    G +  G  L + + K L+ A D D +
Sbjct: 35  LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94

Query: 275 GAIDYTEFTA 284
           G I   EF  
Sbjct: 95  GKIGADEFAK 104

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
                G  D+  F +L+    K +T   +++ F+ LDK+   FI   EL+   K  +   
Sbjct: 17  AFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74

Query: 420 ---DDATIKEIISEVGRDH 435
              +D   K +++    DH
Sbjct: 75  RDLNDTETKALLAAGDSDH 93

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.6 bits (144), Expect = 8e-12
 Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 20/126 (15%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L+  D+   ++  +       +  +F   +   +    +  +   F++ D D SGY
Sbjct: 2   ITDILSAEDIAAALQ--ECQDPDTFEPQKFFQTSGLSKM--SASQVKDIFRFIDNDQSGY 57

Query: 313 DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE 372
            +   +    Q  ++ +   T+                +++       D DG+G I   E
Sbjct: 58  LDGDELKYFLQKFQSDARELTESET------------KSLMDAA----DNDGDGKIGADE 101

Query: 373 FVNLMT 378
           F  ++ 
Sbjct: 102 FQEMVH 107

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.8 bits (129), Expect = 9e-10
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---GSMLTEFDVKQLMEAADMDGN 274
           L       +K+ F  +D D++G L  DEL+  L K       LTE + K LM+AAD DG+
Sbjct: 35  LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94

Query: 275 GAIDYTEFTA 284
           G I   EF  
Sbjct: 95  GKIGADEFQE 104

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 10/95 (10%)

Query: 234 DTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL 292
           +     T    +        G S ++   VK +    D D +G +D  E      + Q  
Sbjct: 17  ECQDPDTFEPQKF---FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSD 73

Query: 293 ERS---EYLSKAFQYFDKDNSG---YDEFRAMVES 321
            R              D D  G    DEF+ MV S
Sbjct: 74  ARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.5 bits (92), Expect = 8e-05
 Identities = 7/79 (8%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG- 419
           +       +  +F           +   ++  F+++D +   ++  +EL+   ++     
Sbjct: 17  ECQDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDA 74

Query: 420 ---DDATIKEIISEVGRDH 435
               ++  K ++     D 
Sbjct: 75  RELTESETKSLMDAADNDG 93

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 61.2 bits (147), Expect = 1e-11
 Identities = 23/177 (12%), Positives = 46/177 (25%), Gaps = 28/177 (15%)

Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML---------------TEFDVKQ 264
              +  LK++F   D D NG L   +       +                          
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 265 LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQT 324
           L + A +  +G++   +F   T      +     ++      K            ++   
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGI-----VGMCDKNADG 117

Query: 325 IRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
             N                T    +     +   Q D +GNG +   E +  + D +
Sbjct: 118 QINADEFAAW--------LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 28/176 (15%)

Query: 255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA---------------TIQRQKLERSEYLS 299
           + +    +K+  +  D DGNGA++  +F                   +Q  K        
Sbjct: 2   TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61

Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
              +     + G       +   + +       +                  ++K +V  
Sbjct: 62  YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVL-----------GPVVKGIVGM 110

Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
            D + +G I+  EF   +T +    +     +AF  +D N +  ++++EL TA ++
Sbjct: 111 CDKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 60.7 bits (146), Expect = 1e-11
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 41/198 (20%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKQLMEAADMD 272
           EE +  +  F ++    +  +S  EL   L KV +   +           + ++   D D
Sbjct: 1   EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 273 GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
             G + + EF       +K +        ++ FD D SG      +  + +         
Sbjct: 60  TTGKLGFEEFKYLWNNIKKWQA------IYKQFDVDRSGTIGSSELPGAFEAA------- 106

Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKA 392
                         F     L  ++++   D  GN+DF  F++ +  +      + + +A
Sbjct: 107 -------------GFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRL------DAMFRA 147

Query: 393 FQYLDKNSDQFITVNELE 410
           F+ LDK+    I VN  E
Sbjct: 148 FKSLDKDGTGQIQVNIQE 165

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 58.5 bits (141), Expect = 2e-11
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 26/130 (20%)

Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
           +  +L+  D+K+ + A       + D+ +F      ++K    + + K F   DKD SG+
Sbjct: 2   MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMVGLKKKSA--DDVKKVFHILDKDKSGF 57

Query: 313 ---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
              DE  ++++                      +  +  +    K L+  GD DG+G I 
Sbjct: 58  IEEDELGSILKG-------------------FSSDARDLSAKETKTLMAAGDKDGDGKIG 98

Query: 370 FIEFVNLMTD 379
             EF  L+ +
Sbjct: 99  VEEFSTLVAE 108

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 51.5 bits (123), Expect = 5e-09
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM---LTEFDVKQLMEAADMDGN 274
           L  +    +K+ F  +D DK+G +  DEL + L    S    L+  + K LM A D DG+
Sbjct: 35  LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94

Query: 275 GAIDYTEFTA 284
           G I   EF+ 
Sbjct: 95  GKIGVEEFST 104

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG 419
           G      + D  +F  ++    K ++ + ++K F  LDK+   FI  +EL +  K  +  
Sbjct: 16  GAFTAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSD 73

Query: 420 ----DDATIKEIISEVGRDH 435
                    K +++   +D 
Sbjct: 74  ARDLSAKETKTLMAAGDKDG 93

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 59.7 bits (143), Expect = 3e-11
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 43/183 (23%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-----------EFDVKQLMEAA 269
              Q +K  F  +D DK+G ++  +  +   +                            
Sbjct: 3   LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62

Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGY---DEFRAMVES 321
            + G   ID T F  +  +  K   ++      L   F+  D +       DE+      
Sbjct: 63  AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122

Query: 322 PQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
                                         M        D + +G +   EFV   +D +
Sbjct: 123 LGLD------------------------KTMAPASFDAIDTNNDGLLSLEEFVIAGSDFF 158

Query: 382 KLE 384
             +
Sbjct: 159 MND 161

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 56.5 bits (136), Expect = 4e-11
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
            +L  E     K  F   D D  G +S  EL   +  +G   T+ ++  ++E  D DG+G
Sbjct: 6   AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 65

Query: 276 AIDYTEFTAATIQRQK 291
            ID+ EF    +++ K
Sbjct: 66  TIDFEEFLVMMVRQMK 81

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 19/85 (22%)

Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
              AF  FD D  G                +S        +    N  +     +++++ 
Sbjct: 16  FKAAFDMFDADGGGD---------------ISTKELGTVMRMLGQNPTKEELDAIIEEV- 59

Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYK 382
              D DG+G IDF EF+ +M    K
Sbjct: 60  ---DEDGSGTIDFEEFLVMMVRQMK 81

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 255 SMLTEFDVKQLMEA---ADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
           + L+E  + +   A    D DG G I   E         +    E L    +  D+D SG
Sbjct: 6   AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 65

Query: 312 ---YDEFRAM 318
              ++EF  M
Sbjct: 66  TIDFEEFLVM 75

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 56.0 bits (135), Expect = 6e-11
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           +   F   D + +G + +DE +  + KVG   LT+ +V++ M+ AD DGNG ID  EF  
Sbjct: 4   ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMD 63

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 41.0 bits (96), Expect = 9e-06
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 24/85 (28%)

Query: 296 EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E + +AF+ FD +  G    DEF+ ++                 +K G            
Sbjct: 2   EEILRAFKVFDANGDGVIDFDEFKFIM-----------------QKVGEEPLTDAEVEEA 44

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
           +K+     D DGNG ID  EF++L+
Sbjct: 45  MKEA----DEDGNGVIDIPEFMDLI 65

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.2 bits (139), Expect = 6e-11
 Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 12/155 (7%)

Query: 223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
           T+A K+ F   D    G ++ D L   L  +G   T   V+ ++ A     + +    + 
Sbjct: 1   TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQ 60

Query: 283 TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG 342
               I+  + E         + F K    +D+      S   +R +     +K       
Sbjct: 61  ITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEK------- 113

Query: 343 NTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
                     + +L+   ++D NG ID+ +F+  +
Sbjct: 114 -----LTDAEVDELLKGVEVDSNGEIDYKKFIEDV 143

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 8/146 (5%)

Query: 151 RDLKPENFCFISRDDNALLKVTDFGSAL-------LFEEEGGEASDDTSVILRMKQFRRM 203
           R  K + F    +     +     G  L         +      + D+S+          
Sbjct: 2   RANK-DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQ 60

Query: 204 SKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVK 263
                   +  ++     +T+   + F   D +  G +S  +LR  LT +G  LT+ +V 
Sbjct: 61  ITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVD 120

Query: 264 QLMEAADMDGNGAIDYTEFTAATIQR 289
           +L++  ++D NG IDY +F    +++
Sbjct: 121 ELLKGVEVDSNGEIDYKKFIEDVLRQ 146

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 8e-11
 Identities = 23/195 (11%), Positives = 62/195 (31%), Gaps = 27/195 (13%)

Query: 203 MSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD- 261
           +++ + LT      +L  +E      +F E+   +  ++          +    L E   
Sbjct: 2   LAEYQDLT------FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA 55

Query: 262 ---VKQLMEAADMD-GNGAIDYTEFTAA-TIQRQKLERSEYLSKAFQYFDKDNSGYDEFR 316
               +++           ++ + +F    ++             AF+ FD D+ G     
Sbjct: 56  NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 115

Query: 317 AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL 376
            +            +      +             ++  ++ + DID +G I+  EF ++
Sbjct: 116 DLSR----------LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHV 165

Query: 377 MTDIYKLETPELLEK 391
           ++      +P+    
Sbjct: 166 IS-----RSPDFASS 175

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 312 YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID-GNGNIDF 370
           +  F  +   PQ  R+V      +     + +  + +A    +++           ++ F
Sbjct: 20  HRRFCEL--LPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSF 77

Query: 371 IEFVNLMTDIYKLETPEL-LEKAFQYLDKNSDQFITVNELETAFK------ENNMGDDAT 423
            +F++L++      TP++    AF+  D + D  +   +L           E+     + 
Sbjct: 78  EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE 137

Query: 424 IKEIISEV 431
           +K++I  +
Sbjct: 138 MKQLIDNI 145

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 58.5 bits (140), Expect = 1e-10
 Identities = 31/198 (15%), Positives = 60/198 (30%), Gaps = 40/198 (20%)

Query: 211 VKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQL 265
           VK+  ++      +  K  F  +D + NG ++ DE+ +  +        +   +    Q+
Sbjct: 1   VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60

Query: 266 MEAADM-----DGNGAIDYTEFTAATIQR-----------QKLERSEYLSKAFQYFDKDN 309
              A       +    I + +F     Q            +     E+    F  FDKD 
Sbjct: 61  CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120

Query: 310 SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID 369
           SG                    +    K  G+  +++       +      D+D  G++D
Sbjct: 121 SGTITL--------------DEWKAYGKISGISPSQE-DCEATFRHC----DLDNAGDLD 161

Query: 370 FIEFVNLMTDIYKLETPE 387
             E        +    PE
Sbjct: 162 VDEMTRQHLGFWYTLDPE 179

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 20/97 (20%), Positives = 34/97 (35%)

Query: 189 DDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA 248
           +    I   +      +L    +K      P    +     F   D D +GT++ DE +A
Sbjct: 72  EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 131

Query: 249 GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
                G   ++ D +      D+D  G +D  E T  
Sbjct: 132 YGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D NG++S  EL   +  +G   +E +V  LM   D+DGN  I
Sbjct: 4   LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63

Query: 278 DYTEFTAATIQRQK 291
           +++EF A   ++ K
Sbjct: 64  EFSEFLALMSRQLK 77

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 19/90 (21%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+     +AF  FDKDN+G                +S        +    +  +    ++
Sbjct: 7   EQIAEFKEAFALFDKDNNGS---------------ISSSELATVMRSLGLSPSEAEVNDL 51

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK 382
           + ++    D+DGN  I+F EF+ LM+   K
Sbjct: 52  MNEI----DVDGNHQIEFSEFLALMSRQLK 77

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.6 bits (131), Expect = 1e-10
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           + K  F + D +K+G LS DE R          T+ D+ +  E  D+DGNG ++  EFT+
Sbjct: 2   SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61

Query: 285 A 285
            
Sbjct: 62  C 62

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.1 bits (96), Expect = 8e-06
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRA 317
             K++ E  D + +G +   EF    +        E + K F+  D D +G    DEF +
Sbjct: 2   SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61

Query: 318 MVES 321
            +E 
Sbjct: 62  CIEK 65

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 19/81 (23%)

Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
           + F+ FDK+  G                          +        +     + K   +
Sbjct: 5   RVFEKFDKNKDGKLSLDEF-------------------REVALAFSPYFTQEDIVKFFEE 45

Query: 360 GDIDGNGNIDFIEFVNLMTDI 380
            D+DGNG ++  EF + +  +
Sbjct: 46  IDVDGNGELNADEFTSCIEKM 66

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 11/63 (17%), Positives = 28/63 (44%)

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
            K++  + D + +G +   EF  +        T E + K F+ +D + +  +  +E  + 
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62

Query: 413 FKE 415
            ++
Sbjct: 63  IEK 65

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.3 bits (140), Expect = 2e-10
 Identities = 29/211 (13%), Positives = 74/211 (35%), Gaps = 16/211 (7%)

Query: 202 RMSKLKKLTVKVIVE--YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT- 258
           +   L K  ++ +        EE  +  + F  +    +G ++  E +   +K       
Sbjct: 4   KSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADP 61

Query: 259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAM 318
           +   + +  + D + +G +D+ E+  A       + ++ L  AF  +D D +G       
Sbjct: 62  KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKN-- 119

Query: 319 VESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
            E  + +  +  + + +  K       +       +K+        +  +   EF+    
Sbjct: 120 -EVLEIVTAIFKMISPEDTK--HLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT- 175

Query: 379 DIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
               L   E+L +  Q+  +   + +   +L
Sbjct: 176 ----LANKEIL-RLIQFEPQKVKEKLKEKKL 201

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 54.9 bits (132), Expect = 2e-10
 Identities = 17/64 (26%), Positives = 35/64 (54%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           +  + + + F   D D +GT++  +LR    ++G  LTE ++++++  AD + +  ID  
Sbjct: 6   DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65

Query: 281 EFTA 284
           EF  
Sbjct: 66  EFIR 69

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 41.4 bits (97), Expect = 9e-06
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 19/83 (22%)

Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
           E + KAF+ FD DNSG                   I     ++       +      L++
Sbjct: 9   EEILKAFRLFDDDNSGT------------------ITIKDLRRV-AKELGENLTEEELQE 49

Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
           ++ + D + +  ID  EF+ +M 
Sbjct: 50  MIAEADRNDDNEIDEDEFIRIMK 72

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDE 314
           +  ++ +     D D +G I   +      +  +    E L +     D+++      DE
Sbjct: 7   SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66

Query: 315 FRAMV 319
           F  ++
Sbjct: 67  FIRIM 71

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM 418
           D D +G I   +   +  ++ +  T E L++     D+N D  I  +E     K+ ++
Sbjct: 19  DDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 76

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 212 KVIVEYLPGEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           K  VE L  E+    K  F       ++G++S  EL   +  +G   T  +++++++  D
Sbjct: 3   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62

Query: 271 MDGNGAIDYTEF 282
            DG+G +D+ EF
Sbjct: 63  EDGSGTVDFDEF 74

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+      AF  F       D   +  E  + +R +    T +                 
Sbjct: 12  EQKNEFKAAFDIFVLGAE--DGSISTKELGKVMRMLGQNPTPE----------------E 53

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT 378
           L++++ + D DG+G +DF EF+ +M 
Sbjct: 54  LQEMIDEVDEDGSGTVDFDEFLVMMV 79

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           ++    +  F   DT+ +G +S  EL   L  +GS+ T  +V+++M   D DG+G I + 
Sbjct: 3   QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSV-TPDEVRRMMAEIDTDGDGFISFD 61

Query: 281 EFTAATIQRQKLERSEYLSKAF 302
           EFT      + L +   +SK F
Sbjct: 62  EFTDFARANRGLVKD--VSKIF 81

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 39.5 bits (92), Expect = 4e-05
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 22/96 (22%)

Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
             + F+ FD +  G      + ++ +T+ +V+     +                M+ ++ 
Sbjct: 8   RERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRR----------------MMAEI- 50

Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAF 393
              D DG+G I F EF +       L   + + K F
Sbjct: 51  ---DTDGDGFISFDEFTDFARANRGLV--KDVSKIF 81

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.3 bits (134), Expect = 5e-10
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 32/195 (16%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKQLMEAADMDGNG 275
                +   L   F  +D D++G +S +EL+  L+    +      V+ ++   D +   
Sbjct: 12  GAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKA 71

Query: 276 AIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
            ++++E                    F    K  + +       +   +     +     
Sbjct: 72  GVNFSE--------------------FTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQA 111

Query: 336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQY 395
              FG   + QF  + + K      D  G G I F +F+     +      + L   F+ 
Sbjct: 112 LSGFGYRLSDQFHDILIRK-----FDRQGRGQIAFDDFIQGCIVL------QRLTDIFRR 160

Query: 396 LDKNSDQFITVNELE 410
            D + D +I V+  +
Sbjct: 161 YDTDQDGWIQVSYEQ 175

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 9e-10
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 25/157 (15%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN-----GAIDYT 280
            KE F   D   +G + Y +    +  +G   T  +V +++     D           + 
Sbjct: 2   FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
               A  + +     E   + F+ FDK+ +G             +R+V     +K  +  
Sbjct: 62  PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGK-------VMGAELRHVLTTLGEKMTE-- 112

Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
               ++   +       L G  D NG I++  F+  +
Sbjct: 113 ----EEVETV-------LAGHEDSNGCINYEAFLKHI 138

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 52.2 bits (125), Expect = 1e-09
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
           G+  + L   F   D + +G +  +EL   L   G  + E D++ LM+ +D + +G ID+
Sbjct: 5   GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDF 64

Query: 280 TEFTA 284
            EF  
Sbjct: 65  DEFLK 69

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.8 bits (98), Expect = 6e-06
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 25/96 (26%)

Query: 288 QRQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
           +  K +  E L+  F+ FDK+  G+   +E   ++                        T
Sbjct: 1   EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR----------------------AT 38

Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
            +      ++ L+   D + +G IDF EF+ +M  +
Sbjct: 39  GEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 74

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDE 314
           +E ++       D + +G ID  E         +    E +    +  DK+N G   +DE
Sbjct: 7   SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 66

Query: 315 FRAMVESPQ 323
           F  M+E  Q
Sbjct: 67  FLKMMEGVQ 75

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 211 VKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
           V+ + +   G+  + L + F   D + +G +  +EL+  L   G  +TE D+++LM+  D
Sbjct: 2   VRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61

Query: 271 MDGNGAIDYTEFTA 284
            + +G IDY EF  
Sbjct: 62  KNNDGRIDYDEFLE 75

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 288 QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQF 347
              K +  E LS  F+ FDK+  GY                  I  ++ K      T + 
Sbjct: 7   DDSKGKTEEELSDLFRMFDKNADGY------------------IDLEELKIML-QATGET 47

Query: 348 RAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
              + +++L+  GD + +G ID+ EF+  M  +
Sbjct: 48  ITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 80

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDE 314
           TE ++  L    D + +G ID  E         +    + + +  +  DK+N G   YDE
Sbjct: 13  TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72

Query: 315 FRAMVESPQ 323
           F   ++  +
Sbjct: 73  FLEFMKGVE 81

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 53.9 bits (128), Expect = 4e-09
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 31/187 (16%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            + Q L E F  +DTD +G +S  EL A L+  G   +    ++L+   D + +G I + 
Sbjct: 15  NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 74

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
           EF                    +          E     +S    R  S+         G
Sbjct: 75  EF--------------------KDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSG 114

Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNS 400
                   +    + L+ + D    G++ F ++V L   + +      +   F + D+  
Sbjct: 115 -----YQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCR------VRNVFAFYDRER 163

Query: 401 DQFITVN 407
              +T  
Sbjct: 164 TGQVTFT 170

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 50.4 bits (120), Expect = 5e-09
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           L  E+    KE F   D D +GT++  EL   +  +G   TE +++ ++   D DGNG I
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61

Query: 278 DYTEF 282
           D+ EF
Sbjct: 62  DFPEF 66

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 33.8 bits (77), Expect = 0.004
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 19/86 (22%)

Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
           E+     +AF  FDKD  G    + +                  +  G   T+       
Sbjct: 5   EQIAEFKEAFSLFDKDGDGTITTKELGTVM--------------RSLGQNPTEA-----E 45

Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT 378
           L+ ++ + D DGNG IDF EF+ +M 
Sbjct: 46  LQDMINEVDADGNGTIDFPEFLTMMA 71

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.6 bits (118), Expect = 8e-09
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
           ++E F   D D NG +S  ELR  +T +G  LT+ +V +++  AD+DG+G ++Y EF  
Sbjct: 5   IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 63

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 19/82 (23%)

Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
           E + +AF+ FDKD +GY     +                     G   T +      + +
Sbjct: 3   EEIREAFRVFDKDGNGYISAAELRHVM--------------TNLGEKLTDE-----EVDE 43

Query: 356 LVLQGDIDGNGNIDFIEFVNLM 377
           ++ + DIDG+G +++ EFV +M
Sbjct: 44  MIREADIDGDGQVNYEEFVQMM 65

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 51.9 bits (123), Expect = 2e-08
 Identities = 20/203 (9%), Positives = 50/203 (24%), Gaps = 34/203 (16%)

Query: 221 EETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
            + Q +K  F    D + +G++  ++    +T+   +                       
Sbjct: 5   FQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKG-------------------- 44

Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
              + A  +  +    +         D +      +   +   +          D     
Sbjct: 45  -SLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWC 103

Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKN 399
                  F+ M          D+ G+G +D  EF N   +         +   +  +   
Sbjct: 104 QNRIPFLFKGM----------DVSGDGIVDLEEFQNYCKNFQL--QCADVPAVYNVITDG 151

Query: 400 SDQFITVNELETAFKENNMGDDA 422
                 +N  +  +        A
Sbjct: 152 GKVTFDLNRYKELYYRLLTSPAA 174

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
             + F   D +  G +S  +LR  LT +G  LT+ +V +L++  ++D NG IDY +F
Sbjct: 3   FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 19/79 (24%)

Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
           E   KAFQ FDK+++G                   +     +   L    +      + +
Sbjct: 1   EDFVKAFQVFDKESTGK------------------VSVGDLRYM-LTGLGEKLTDAEVDE 41

Query: 356 LVLQGDIDGNGNIDFIEFV 374
           L+   ++D NG ID+ +F+
Sbjct: 42  LLKGVEVDSNGEIDYKKFI 60

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 49.0 bits (115), Expect = 7e-08
 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 20/148 (13%)

Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR 289
           F E+D + +G +SY+E++A ++K  ++  E  ++ + ++ D DGNG ID  EF       
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65

Query: 290 QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRA 349
           Q  + S+        +   +   D      E     +                       
Sbjct: 66  QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-------------------- 105

Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
           +  + + V++ D +G+G I   EF+   
Sbjct: 106 IEKVAEQVMKADANGDGYITLEEFLEFS 133

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 7e-08
 Identities = 13/152 (8%), Positives = 34/152 (22%), Gaps = 16/152 (10%)

Query: 231 IEMDTDKNGTLSYDELRAGLTKVGSML--TEFDVKQLMEAADMDGNGAIDYTEFTAATIQ 288
           ++M  +  G +               +              D           + +    
Sbjct: 14  LKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFL-- 71

Query: 289 RQKLERSEYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTK 345
                R E + + F  +      Y   +     +   Q    ++ +    A+        
Sbjct: 72  MSLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARP------- 123

Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
             +   ++ K    G     G +     V  +
Sbjct: 124 -DQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 154

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 15/157 (9%), Positives = 37/157 (23%), Gaps = 39/157 (24%)

Query: 294 RSEYLSKAFQ--YFDKDNSG---YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR 348
           RS +L K         ++ G      F  M                    F     +   
Sbjct: 3   RSTFLDKILVKLKMQLNSEGKIPVKNFFQM--------------------FPADRKRVEA 42

Query: 349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
           A++       + D     +     + + +     L     +++ F      +  ++T   
Sbjct: 43  ALSACHLPKGKNDAINPEDFPEPVYKSFL---MSLCPRPEIDEIFTSYHAKAKPYMTKEH 99

Query: 409 LETAFKE-----------NNMGDDATIKEIISEVGRD 434
           L     +                   ++ +I +    
Sbjct: 100 LTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPS 136

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 7e-08
 Identities = 16/62 (25%), Positives = 30/62 (48%)

Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
            A+ ++F   DT K  T+S +E RA   +   +LT+    +L     ++  G + Y +F 
Sbjct: 20  HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 79

Query: 284 AA 285
           + 
Sbjct: 80  SR 81

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 4e-04
 Identities = 8/94 (8%), Positives = 28/94 (29%), Gaps = 19/94 (20%)

Query: 285 ATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
           A + +        +++ F+ FD   +                     +     +     T
Sbjct: 9   ARLHKAVTSHYHAITQEFENFDTMKTNTISR--------------EEFRAICNRRVQILT 54

Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
            +        +L  +  ++  G + + +F++  +
Sbjct: 55  DE-----QFDRLWNEMPVNAKGRLKYPDFLSRFS 83

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 16/80 (20%)

Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT----------------EFDVKQLMEAA 269
            K  FI  D + +G L   EL A  TK    +                     + +M+  
Sbjct: 18  PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 77

Query: 270 DMDGNGAIDYTEFTAATIQR 289
           D + +  +   EF A+T ++
Sbjct: 78  DTNQDRLVTLEEFLASTQRK 97

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 10/84 (11%), Positives = 23/84 (27%), Gaps = 9/84 (10%)

Query: 298 LSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
               F   D ++ G     E  A+               D   +       +   + M +
Sbjct: 18  PKTFFILHDINSDGVLDEQELEALF------TKELEKVYDPKNEEDDMREMEEERLRMRE 71

Query: 355 KLVLQGDIDGNGNIDFIEFVNLMT 378
            ++   D + +  +   EF+    
Sbjct: 72  HVMKNVDTNQDRLVTLEEFLASTQ 95

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 19/83 (22%)

Query: 259 EFDVKQLMEAADMDGNGAIDYTEFTAA----------------TIQRQKLERSEYLSKAF 302
            F+ K      D++ +G +D  E  A                  ++  + ER        
Sbjct: 15  RFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVM 74

Query: 303 QYFDKDNSG---YDEFRAMVESP 322
           +  D +       +EF A  +  
Sbjct: 75  KNVDTNQDRLVTLEEFLASTQRK 97

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 19/164 (11%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
           +E + L ++F ++D D +G+LS +E       +  +     V+++++  D DGNG +D+ 
Sbjct: 13  DEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVDFK 68

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
           EF     Q       E   +        +         +     +   +++         
Sbjct: 69  EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL--------- 119

Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
               K  +   ++ K ++  D DG+G I F EF  ++   DI+K
Sbjct: 120 ----KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 159

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 3e-07
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +   E     E F++ D D +G +S  E+R    K  + L    +  +    D    G 
Sbjct: 3   VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGK 60

Query: 277 IDYTEFTAA 285
           +   +F  A
Sbjct: 61  LSKDQFALA 69

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 221 EETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGS--MLTEFDVKQLMEAADMDGNGA 276
           +    LK  F +          LS +EL+  +       +     +  L +  D +G+G 
Sbjct: 4   KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63

Query: 277 IDYTEF 282
           + + EF
Sbjct: 64  VSFEEF 69

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.0 bits (78), Expect = 0.004
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 12/75 (16%)

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAM------------NMLKKLVLQGDIDGNGN 367
           +SP  ++++   Y  K       + ++ + +              L  L  + D +G+G 
Sbjct: 4   KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63

Query: 368 IDFIEFVNLMTDIYK 382
           + F EF  L+  I +
Sbjct: 64  VSFEEFQVLVKKISQ 78

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 43.1 bits (100), Expect = 9e-06
 Identities = 26/163 (15%), Positives = 68/163 (41%), Gaps = 25/163 (15%)

Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
           LP ++ Q +KE F  +D D++G +S ++++A   ++G    + ++  ++     +  G +
Sbjct: 1   LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPL 56

Query: 278 DYTEFTAATIQRQKLERSEYLSKA-FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
           ++T F +    +     SE   +  F  FD+  +        +E  + +        +K 
Sbjct: 57  NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKK----LNIEYIKDLLENMGDNFNKD 112

Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
           +               ++    +  ++G G  D+++F  ++  
Sbjct: 113 E---------------MRMTFKEAPVEG-GKFDYVKFTAMIKG 139

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +  E+ Q    +F  +  D NG +     +   TK  S L   ++  + E +D D +GA
Sbjct: 2   KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59

Query: 277 IDYTEFTAA 285
           +   EF AA
Sbjct: 60  LTLDEFCAA 68

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +  E+       F  +    NG LS D+++  L      L    + ++ E +D+D +G 
Sbjct: 3   AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGM 59

Query: 277 IDYTEFTAA 285
           +D  EF  A
Sbjct: 60  LDRDEFAVA 68

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 41.9 bits (97), Expect = 2e-05
 Identities = 24/158 (15%), Positives = 46/158 (29%), Gaps = 21/158 (13%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
            +    K+ F   D    G +    +   L   G   T       +E+          + 
Sbjct: 2   TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTL-AEITEIESTLPAEVDMEQFL 60

Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
           +              E   K FQ FDKD +G             +R V     +K     
Sbjct: 61  QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGM-------IGVGELRYVLTSLGEKLSN-- 111

Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
                       + +L+    +  +G +++ +FV ++ 
Sbjct: 112 ----------EEMDELLKGVPVK-DGMVNYHDFVQMIL 138

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFDVKQLMEAADMDGNGAID 278
           EE +   E F          +S +EL+  +  +G  L      + +++E  D +G+G + 
Sbjct: 5   EEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63

Query: 279 YTEFTA 284
           + EF  
Sbjct: 64  FEEFLV 69

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 236 DKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEF 282
                L+  EL+  LT+           E   ++LM   D + +  +D+ E+
Sbjct: 23  GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEY 74

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 6e-04
 Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 23/95 (24%)

Query: 292 LERS-EYLSKAFQ-YFDKDNSGY----DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTK 345
           LE++ + +   F  Y  K+   +     E + ++                  +       
Sbjct: 4   LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELL-----------------TRELPSFLG 46

Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
           +       +KL+   D + +  +DF E+   ++ I
Sbjct: 47  KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNG 275
              + +   F +   DK G L+ ++LR  + K              V ++M+  D   +G
Sbjct: 6   HAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDG 64

Query: 276 AIDYTEF 282
            + +  F
Sbjct: 65  KVGFQSF 71

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 22/94 (23%)

Query: 291 KLERS-EYLSKAFQYFDKDNSGY---DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ 346
           ++E + E +   F  F  D  GY   ++ R ++                 +K   G  + 
Sbjct: 3   QMEHAMETMMFTFHKFAGDK-GYLTKEDLRVLM-----------------EKEFPGFLEN 44

Query: 347 FRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
            +    + K++   D   +G + F  F +L+  +
Sbjct: 45  QKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 7e-05
 Identities = 10/70 (14%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 236 DKNGTLSYDELRAGLTKVG--SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE 293
            +  +LS +E +  +T+     +     + + M++ D++ +  + + E+     +  K  
Sbjct: 28  GRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEI 87

Query: 294 RSEYLSKAFQ 303
           R +   K  +
Sbjct: 88  RKKKDLKIRK 97

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 40.4 bits (93), Expect = 9e-05
 Identities = 23/164 (14%), Positives = 50/164 (30%), Gaps = 20/164 (12%)

Query: 218 LPGEETQALKEKFIEMDTDKN--GTLSYDELRAGLTKVGSMLTEFDVKQLM-EAADMDGN 274
           L  +E   LK+ F   D      G +   +L      +G      DV  +       + +
Sbjct: 1   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60

Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
              +        +   +        +AF+ FD++  G+     +      +  +    +D
Sbjct: 61  LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELR---HVLTALGERLSD 117

Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
           +                ++K        D  GN+ + +FV  + 
Sbjct: 118 E------------DVDEIIKLT--DLQEDLEGNVKYEDFVKKVM 147

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 234 DTDKNG-TLSYDELRAGLTK-VGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
               N   +  D+L+  L       + +       +  D++ +GA+++ EF
Sbjct: 21  LIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEF 71

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 236 DKNGTLSYDELRAGLTKVGSM-----LTEFDVKQLMEAADMDGNGAIDYTEF 282
                LS  EL+  L    S           V ++M+  D +G+G +D+ EF
Sbjct: 23  GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEF 74

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAM---------------NMLKKLVLQGDIDG 364
            + +T+ NV H ++ K       + K+ + +               + + K++ + D +G
Sbjct: 6   TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENG 65

Query: 365 NGNIDFIEFVNLMTDI 380
           +G +DF EFV L+  +
Sbjct: 66  DGEVDFQEFVVLVAAL 81

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
           + +++    G +   +  A L K G       + ++ + AD DG G +   EF  A
Sbjct: 17  YRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSKQEFFVA 70

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 234 DTDKNG-TLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEF 282
               +   L   EL+  L K  +        E D  + M   D + +  +D+ E+
Sbjct: 20  GRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEY 74

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 23/97 (23%)

Query: 290 QKLERS-EYLSKAFQ-YFDKDNSGY----DEFRAMVESPQTIRNVSHIYTDKAKKFGLGN 343
           + LE++   +   FQ Y  +    Y     E + +++       ++     + ++     
Sbjct: 2   RPLEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQK-----ELATWTPTEFRECDYNK 56

Query: 344 TKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
                    +  L    D + +  +DF+E+V  +  +
Sbjct: 57  --------FMSVL----DTNKDCEVDFVEYVRSLACL 81

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 25/95 (26%)

Query: 292 LERS-EYLSKAFQ-YFDKDNSGY----DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTK 345
           L+++   L   F  Y  ++   +     E + +++                         
Sbjct: 4   LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKEL-------------------TIG 44

Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDI 380
                  + +L+   D + +  ++F E+V  +  +
Sbjct: 45  SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 4/53 (7%)

Query: 234 DTDKNG-TLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGNGAIDYTEF 282
             + +  TLS  EL+  + K  +    L + ++ +LME  D + +  +++ E+
Sbjct: 20  GREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEY 72

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 8/55 (14%), Positives = 19/55 (34%), Gaps = 7/55 (12%)

Query: 235 TDKNGTLSYDELRAGLTKVGSM-------LTEFDVKQLMEAADMDGNGAIDYTEF 282
           T ++  +    L   + +                +  + E  D + +  ID++EF
Sbjct: 20  TRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF 74

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 236 DKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
               TLS  EL+  LTK     + ++  +  + ++ +  D + +  +D+ EF
Sbjct: 22  GHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEF 73

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
            +  E+ +    +F  +  D +  +S    +   TK  S L+  ++  + E +D D +GA
Sbjct: 15  RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGA 72

Query: 277 IDYTEFTAA 285
           +   EF AA
Sbjct: 73  LTLPEFCAA 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	436
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.94
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.89
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.88
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.87
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.86
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.86
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.85
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.84
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.82
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.82
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.81
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.81
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.8
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.8
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.78
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.78
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.78
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.78
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.78
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.78
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.77
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.77
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.76
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.76
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.76
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.75
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.74
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.73
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.73
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.73
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.72
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.72
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.71
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.71
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.71
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.71
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.71
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.7
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.7
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.7
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.7
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.69
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.69
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.69
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.69
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.68
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.66
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.66
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.66
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.65
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.65
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.65
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.64
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.64
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.62
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.6
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.59
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.57
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.56
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.56
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.56
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.55
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.55
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.54
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.54
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.54
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.52
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.51
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.51
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.51
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.5
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.49
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.47
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.46
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.45
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.4
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.39
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.36
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.36
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.35
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.35
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.35
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.33
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.32
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.31
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.31
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.31
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.31
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.3
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.3
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.3
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.3
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.29
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.29
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.27
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.25
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.24
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.19
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	99.19
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.15
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.15
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.14
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.13
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.13
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.11
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.1
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.09
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.09
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.04
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.01
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.96
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.95
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.9
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.89
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.88
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.88
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.87
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.84
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.84
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.84
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.83
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.8
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.77
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.71
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.65
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.65
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.63
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.62
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.61
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.61
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.6
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.6
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.6
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.56
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.56
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.54
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.5
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.48
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.43
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.43
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.39
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.3
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	98.17
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.07
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.05
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.03
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.0
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.97
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.85
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	97.74
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	97.73
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.7
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	97.69
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.6
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.46
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.08
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.88
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.67
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	95.99
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.73
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	94.03
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	91.73
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	91.18
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	91.02
d1pula1	103	Hypothetical protein c32e8.3 {Caenorhabditis elega	90.97
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	90.33
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	88.97
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	87.73
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	86.9

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-45  Score=333.32  Aligned_cols=242  Identities=23%  Similarity=0.339  Sum_probs=184.1

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++++.||+|+||.||+|+++.+|+.||||++......   .....+.+|+.+|+.+ +|||||++++++.+++.+
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~---~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~   78 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKML-NHENVVKFYGHRREGNIQ   78 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCcee
Confidence            457899999999999999999999999999999999765322   2335688999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+..
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~  155 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRY  155 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEE
T ss_pred             EEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeecc
Confidence            9999999999999999887889999999999999999999999999999999999999   7778999999999987643


Q ss_pred             cCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          183 EGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       183 ~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      ...          ....|||++.+...++.++|+||+|++++ +.++..      .   .++...+..   ..+......
T Consensus       156 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvily-eml~G~------~---pf~~~~~~~---~~~~~~~~~  222 (271)
T d1nvra_         156 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT-AMLAGE------L---PWDQPSDSC---QEYSDWKEK  222 (271)
T ss_dssp             TTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHH-HHHHSS------C---SCSSSSTTS---HHHHHHHTT
T ss_pred             CCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHH-HHHhCC------C---CCCCCChHH---HHHHHHhcC
Confidence            221          11229999987666788999999965543 332100      0   011111111   111111111


Q ss_pred             c-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          253 V-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       253 ~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .     ...++.+-.+.+-+++..|++.|++..|.+.
T Consensus       223 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         223 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0     0133455555666778889999999988765

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-44  Score=324.14  Aligned_cols=241  Identities=25%  Similarity=0.382  Sum_probs=189.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++++.||+|+||.||+|+++.+++.||||++.+..... ......+.+|+.+++.+ +|||||++++++.+++.+|
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   82 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK-AGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVY   82 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC-hHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEE
Confidence            478999999999999999999999999999999997643322 33456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|||||++|+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        83 ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          83 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCC
T ss_pred             EEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCC
Confidence            999999999999999998899999999999999999999999999999999999999   77889999999999876543


Q ss_pred             CCC------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh----c
Q 042392          184 GGE------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK----V  253 (436)
Q Consensus       184 ~~~------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~----~  253 (436)
                      ...      ...|||++.+ ..|+.++|+||+|++++ +.+...             .+-.+ -+..++...+..    +
T Consensus       160 ~~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvily-ell~G~-------------~Pf~~-~~~~~~~~~i~~~~~~~  223 (263)
T d2j4za1         160 RRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCY-EFLVGK-------------PPFEA-NTYQETYKRISRVEFTF  223 (263)
T ss_dssp             CCEETTEEGGGCCHHHHTT-CCCCTTHHHHHHHHHHH-HHHHSS-------------CTTCC-SSHHHHHHHHHTTCCCC
T ss_pred             cccccCCCCcccCHHHHcC-CCCCchhhhhhHhHHHH-HHhcCC-------------CCCCC-CCHHHHHHHHHcCCCCC
Confidence            222      1229999877 56889999999965543 332100             00011 122223222222    1


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ....+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       224 p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         224 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            22345554555666778899999999988753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-43  Score=327.06  Aligned_cols=247  Identities=26%  Similarity=0.387  Sum_probs=181.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ..+.+.++|++.+.||+|+||+||+|+++.+|+.||||++.+.....   ....+.+|+.+|+.+ +|||||++++++.+
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~   78 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG---KEGSMENEIAVLHKI-KHPNIVALDDIYES   78 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-------------CHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh---HHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            34678889999999999999999999999999999999998654332   235678999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      .+.+|+|||||+||+|.+++.+.+++++..++.++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|+
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             CCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            99999999999999999999988899999999999999999999999999999999999999655567899999999998


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .......       ....|||++.+ ..|+.++|+||+|++++ +.+..              ..+-...+..++...+.
T Consensus       159 ~~~~~~~~~~~~GT~~y~APE~~~~-~~~~~~~DiwSlGvily-ell~g--------------~~Pf~~~~~~~~~~~i~  222 (307)
T d1a06a_         159 MEDPGSVLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAY-ILLCG--------------YPPFYDENDAKLFEQIL  222 (307)
T ss_dssp             --------------CTTSCHHHHTT-CCCCTHHHHHHHHHHHH-HHHHS--------------SCSCCCSSHHHHHHHHH
T ss_pred             EccCCCeeeeeeeCccccCcHHHcC-CCCCcHHHhhhhhHHHH-HHHhC--------------CCCCCCCCHHHHHHHHh
Confidence            7654322       12239998876 46899999999966543 33210              00000011222222211


Q ss_pred             h--------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 K--------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~--------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .        ....++.+-.+.+-+++..|++.|+++.|.+.+
T Consensus       223 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         223 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             TTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1        112345555566666788899999999998764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=326.60  Aligned_cols=240  Identities=23%  Similarity=0.333  Sum_probs=184.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+..... ......+.+|+++|+.+ +||||+++++++.+.+.+|
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~   84 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLY   84 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC-HHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEE
Confidence            368999999999999999999999999999999997643222 23446789999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+...
T Consensus        85 ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          85 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC--
T ss_pred             EEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccC
Confidence            999999999999999999999999999999999999999999999999999999999   77889999999999876532


Q ss_pred             CC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-
Q 042392          184 GG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-  252 (436)
Q Consensus       184 ~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-  252 (436)
                      ..          ....|||++.+ ..|+.++|+||+|+++ .+.+....      .|       .+ -+..++...+.. 
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~~DiwSlGvil-yell~g~~------Pf-------~~-~~~~~~~~~i~~~  225 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCII-YQLVAGLP------PF-------RA-GNEYLIFQKIIKL  225 (288)
T ss_dssp             --------CCCCGGGCCHHHHHT-CCCCHHHHHHHHHHHH-HHHHHSSC------SS-------CC-SSHHHHHHHHHTT
T ss_pred             CcccccccccCCccccCceeecc-CCCCcccceehhhHHH-HHHhhCCC------CC-------CC-cCHHHHHHHHHcC
Confidence            21          11239999876 4688999999996554 33321000      00       01 112222221111 


Q ss_pred             ---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          253 ---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       253 ---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                         +...++.+-.+.+-+++..|++.|++.+|.+.
T Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         226 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence               12234544444555567888888888888643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-43  Score=322.41  Aligned_cols=239  Identities=25%  Similarity=0.274  Sum_probs=184.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++......    ....+.+|+.+|+.+ +|||||++++++.+.+.+
T Consensus        18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~   92 (293)
T d1yhwa1          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN-KNPNIVNYLDSYLVGDEL   92 (293)
T ss_dssp             TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh----HHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEE
Confidence            456899999999999999999999999999999998765322    245689999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||+||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+..
T Consensus        93 ~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1          93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             EEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred             EEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeecc
Confidence            999999999999988765 569999999999999999999999999999999999999   7788999999999998754


Q ss_pred             cCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          183 EGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       183 ~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      .....        ..|||++.+ ..|+.++|+||+|++++ ++++..      ..|       .+.-..+.+......- 
T Consensus       169 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvily-emltG~------~Pf-------~~~~~~~~~~~~~~~~~  233 (293)
T d1yhwa1         169 EQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAI-EMIEGE------PPY-------LNENPLRALYLIATNGT  233 (293)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHHH-HHHHSS------CTT-------TTSCHHHHHHHHHHHCS
T ss_pred             ccccccccccCCCccChhhhcC-CCCCchhceehHhHHHH-HHhhCC------CCC-------CCCCHHHHHHHHHhCCC
Confidence            32211        128998876 57889999999966553 322100      000       0111112222222211 


Q ss_pred             -----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 -----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 -----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                           ...++.+-.+.+-+++..|++.|+++.|.+.+
T Consensus       234 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 11234444455666788899999999887653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-42  Score=319.48  Aligned_cols=245  Identities=18%  Similarity=0.182  Sum_probs=192.5

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .|+...++|++.+.||+|+||.||+|+++.+++.||||+++....     ..+.+.+|+.+|+.+ +|||||++++++.+
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-----~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   84 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR   84 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS-----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc-----hHHHHHHHHHHHHhC-CCCCEecCCccEee
Confidence            577778899999999999999999999999999999999875532     235688999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .+.+|+|||||++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        85 ~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~  161 (287)
T d1opja_          85 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGL  161 (287)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCC
T ss_pred             CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccc
Confidence            99999999999999999999765  458999999999999999999999999999999999999   7788999999999


Q ss_pred             cccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHH
Q 042392          177 ALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELR  247 (436)
Q Consensus       177 a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~  247 (436)
                      |+........         ...|||++.+ ..|+.++|+||+|++++ +.++.             ..+.....+..++.
T Consensus       162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l~-ell~~-------------~~p~~~~~~~~~~~  226 (287)
T d1opja_         162 SRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLW-EIATY-------------GMSPYPGIDLSQVY  226 (287)
T ss_dssp             TTTCCSSSSEEETTEEECGGGCCHHHHHH-CCCSHHHHHHHHHHHHH-HHHTT-------------SCCSSTTCCHHHHH
T ss_pred             eeecCCCCceeeccccccccccChHHHcC-CCCCchhhhhhHHHHHH-HHHhC-------------CCCCCCcchHHHHH
Confidence            9877543221         1228998876 57899999999966543 32210             11112223344444


Q ss_pred             HHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          248 AGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       248 ~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ..+..     .....+.+-.+.+.+++..|++.|+++.|.+..+.
T Consensus       227 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~  271 (287)
T d1opja_         227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE  271 (287)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            43332     11234444455566677889999999999876554

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-43  Score=328.51  Aligned_cols=184  Identities=20%  Similarity=0.253  Sum_probs=162.3

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ...++|++++.||+|+||+||+|+++.+|+.||+|+++....   ......+.+|+.+|+.+ +|||||+++++|.+.+.
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC---TTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC---HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            345789999999999999999999999999999999976532   23456789999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~  155 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQL  155 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHH
T ss_pred             EEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCcccc
Confidence            99999999999999999998899999999999999999999997 599999999999999   77889999999999976


Q ss_pred             cccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGG------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .....      ....|||++.+ ..|+.++|+||+|+++
T Consensus       156 ~~~~~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlGvil  193 (322)
T d1s9ja_         156 IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL  193 (322)
T ss_dssp             HHHTC---CCSSCCCCHHHHHC-SCCCTTHHHHHHHHHH
T ss_pred             CCCccccccCCccccCchHHcC-CCCCcHHHHHHHHHHH
Confidence            54322      22339999987 4799999999995544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-42  Score=324.23  Aligned_cols=244  Identities=21%  Similarity=0.224  Sum_probs=188.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.+.|++++.||+|+||.||+|++..+|+.||||++....... ......+.+|+.+|+.| +|||||++++++.+++.+
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~   90 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA   90 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEE
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC-HHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEE
Confidence            4456999999999999999999999999999999998765433 34456789999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||++|+|..++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        91 ~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS
T ss_pred             EEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCC
Confidence            9999999999998887778889999999999999999999999999999999999999   6788999999999987765


Q ss_pred             cCCCCC----CChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc---
Q 042392          183 EGGEAS----DDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---  253 (436)
Q Consensus       183 ~~~~~~----~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~---  253 (436)
                      ......    .|||++.+.  ..|+.++|+||+|++++ +.++..             .+-.+.-..+.+......-   
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvily-el~~g~-------------~Pf~~~~~~~~~~~i~~~~~~~  233 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI-ELAERK-------------PPLFNMNAMSALYHIAQNESPA  233 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHH-HHHHSS-------------CTTTTSCHHHHHHHHHHSCCCC
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHH-HHHHCC-------------CCCCCCCHHHHHHHHHhCCCCC
Confidence            433322    299998753  35889999999965543 332100             0001111122222222221   


Q ss_pred             --CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 --GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 --~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        ....+++-.+.+-+++..|++.|+++.|.+.+
T Consensus       234 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence              11234444455566778899999999997753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-42  Score=322.67  Aligned_cols=234  Identities=24%  Similarity=0.285  Sum_probs=183.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++++.||+|+||.||+|+++.+|+.||||++.+..... ......+.+|+.+|+.+ +||||++++++|.+.+.+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC-HHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccc
Confidence            468999999999999999999999999999999997653322 23456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~  158 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCT
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccC
Confidence            999999999999999999999999999999999999999999999999999999999   78899999999999876543


Q ss_pred             CCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh---
Q 042392          184 GGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK---  252 (436)
Q Consensus       184 ~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~---  252 (436)
                      ....        ..|||++.+ ..|+.++|+||+|+.+ .+++...             .+..+ -+..++...+..   
T Consensus       159 ~~~~~~~~GT~~Y~aPE~~~~-~~y~~~~DiwSlGvil-yeml~G~-------------~pf~~-~~~~~~~~~i~~~~~  222 (337)
T d1o6la_         159 GATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM-YEMMCGR-------------LPFYN-QDHERLFELILMEEI  222 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHH-HHHHHSS-------------CSSCC-SSHHHHHHHHHHCCC
T ss_pred             CcccccceeCHHHhhhhhccC-CCCChhhcccchhhHH-HHHHHCC-------------CCCCC-cCHHHHHHHHhcCCC
Confidence            3221        229998876 4689999999995544 3332100             00011 122222222221   


Q ss_pred             -cCCCCCHHHHHHHHHHHcCCCCCccc
Q 042392          253 -VGSMLTEFDVKQLMEAADMDGNGAID  278 (436)
Q Consensus       253 -~~~~~s~~~i~~l~~~~d~d~~g~i~  278 (436)
                       +...++.+-.+.+-+.+..|+..|++
T Consensus       223 ~~p~~~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         223 RFPRTLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCccCCHHHHHHHHhhccCCchhhcc
Confidence             22345555555566677888888885

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-42  Score=316.37  Aligned_cols=240  Identities=20%  Similarity=0.228  Sum_probs=182.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.+.|++++.||+|+||.||+|+++.+|+.||||++.....    ...+.+.+|+.+|+.+ +|||||++++++.+++.+
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~   84 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASC-DHPNIVKLLDAFYYENNL   84 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS----GGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH----HHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeE
Confidence            34579999999999999999999999999999999976532    2335678999999999 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      |+|||||+||+|.+++.+. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        85 ~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1          85 WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECH
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccC
Confidence            9999999999999997764 569999999999999999999999999999999999999   778899999999997654


Q ss_pred             cc--------CCCCCCChHHHHH----HHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          182 EE--------GGEASDDTSVILR----MKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       182 ~~--------~~~~~~~pe~~~~----~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ..        +.....|||++..    ...|+.++|+||+|+++ .+.++..      ..|       .+.-..+.+...
T Consensus       162 ~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvil-yemltg~------~Pf-------~~~~~~~~~~~i  227 (288)
T d2jfla1         162 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL-IEMAEIE------PPH-------HELNPMRVLLKI  227 (288)
T ss_dssp             HHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHH-HHHHHSS------CTT-------TTSCGGGHHHHH
T ss_pred             CCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHH-HHHhhCC------CCC-------CCCCHHHHHHHH
Confidence            31        1222349999852    34688999999996554 3332100      001       111111112222


Q ss_pred             HHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          250 LTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       250 l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ...-.      ...+.+-.+.+-+++..|++.|++..|.+.
T Consensus       228 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         228 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            22111      123444444555667888899999888765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-42  Score=313.58  Aligned_cols=239  Identities=22%  Similarity=0.302  Sum_probs=175.7

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CCe
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ETA  101 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~~  101 (436)
                      .++|++.+.||+|+||.||+|+++.+|+.||||++......  ......+.+|+++|+.+ +|||||++++++.+  .+.
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~   79 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT   79 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC--HHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----C
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC--HHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCE
Confidence            46899999999999999999999999999999999776543  23456789999999999 69999999999864  466


Q ss_pred             EEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcC-----cccccCCCCcceeeccCCCCcEEEE
Q 042392          102 VHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +|+|||||+||+|.+++.+    ...+++..++.++.||+.||.|||+.+     |+||||||+|||+   +.++.+||+
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~  156 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLG  156 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEEC
T ss_pred             EEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEe
Confidence            9999999999999999864    356999999999999999999999976     9999999999999   778899999


Q ss_pred             ecCCcccccccCC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          173 DFGSALLFEEEGG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       173 DFG~a~~~~~~~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      |||+|+.+.....        ....|||++.+ ..|+.++|+||+|+++ .+.++.              ..+-...+..
T Consensus       157 DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvil-yel~tg--------------~~Pf~~~~~~  220 (269)
T d2java1         157 DFGLARILNHDTSFAKAFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLL-YELCAL--------------MPPFTAFSQK  220 (269)
T ss_dssp             CHHHHHHC-----------CCCSCCCHHHHTT-CCCCHHHHHHHHHHHH-HHHHHS--------------SCSCCCSSHH
T ss_pred             eccceeecccCCCccccCCCCcccCCHHHHcC-CCCChHHHHHhhCHHH-HHHhhC--------------CCCCCCCCHH
Confidence            9999987654322        12238998865 5689999999996544 333210              0010112333


Q ss_pred             HHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          245 ELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       245 eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ++...+..     +....+++-.+.+-+++..|++.|+++.|.+.
T Consensus       221 ~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         221 ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            33333222     12234544444455677888899999988764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=8.9e-42  Score=323.21  Aligned_cols=244  Identities=25%  Similarity=0.351  Sum_probs=187.7

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      ...+.++|++++.||+|+||.||+|+++.+|+.||||++....    ......+.+|+.+|+.| +|||||++++++.+.
T Consensus        21 ~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~----~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~   95 (350)
T d1koaa2          21 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDD   95 (350)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS----HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEET
T ss_pred             CCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc----hhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEEC
Confidence            4567889999999999999999999999999999999997653    23356788999999999 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+|||||+||+|.+++.+ .+++++..++.++.||+.||.|||++||+||||||+|||+.. +.++.+||+|||+|+
T Consensus        96 ~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~  174 (350)
T d1koaa2          96 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTA  174 (350)
T ss_dssp             TEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchhe
Confidence            999999999999999999854 457999999999999999999999999999999999999943 235789999999998


Q ss_pred             cccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          179 LFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       179 ~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      .+.....       ....|||++.+ ..|+.++|+||+|+++ .++++..             .+-.|. +..++...+.
T Consensus       175 ~~~~~~~~~~~~gT~~Y~aPEv~~~-~~~~~~~DiwSlGvil-yell~G~-------------~Pf~~~-~~~~~~~~i~  238 (350)
T d1koaa2         175 HLDPKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLS-YILLSGL-------------SPFGGE-NDDETLRNVK  238 (350)
T ss_dssp             ECCTTSCEEEECSCTTTCCHHHHHT-CCBCHHHHHHHHHHHH-HHHHHSS-------------CSSCCS-SHHHHHHHHH
T ss_pred             ecccccccceecCcccccCHHHHcC-CCCChhHhhhhhhHHH-HHHHhCC-------------CCCCCC-CHHHHHHHHH
Confidence            8754322       22339999876 5688999999995544 3332100             000111 1222222211


Q ss_pred             hcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          252 KVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       252 ~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...        ..++.+-.+.+-+++..|++.|++..|.+.+
T Consensus       239 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         239 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111        1234444555666778888999999888764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=316.10  Aligned_cols=248  Identities=26%  Similarity=0.363  Sum_probs=188.1

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccc--hhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK--YAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      +.+.++|++++.||+|+||+||+|+++.+|+.||||++.+.....  .....+.+.+|+.+|+.+ +|||||++++++.+
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   84 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN   84 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            457788999999999999999999999999999999997654322  122356789999999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccC-CCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~-~~~~~kl~DFG~a  177 (436)
                      .+.+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||+...+ ....+||+|||+|
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            999999999999999999999988999999999999999999999999999999999999994322 1236999999999


Q ss_pred             ccccccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          178 LLFEEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       178 ~~~~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ..........       ..|||++.+ ..|+.++|+||+|+.+ .+.++..             .+-.| .+..++...+
T Consensus       165 ~~~~~~~~~~~~~~t~~y~APE~~~~-~~~~~~~DiwSlGvil-yell~g~-------------~Pf~~-~~~~~~~~~i  228 (293)
T d1jksa_         165 HKIDFGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVIT-YILLSGA-------------SPFLG-DTKQETLANV  228 (293)
T ss_dssp             EECTTSCBCSCCCCCGGGCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS-------------CSSCC-SSHHHHHHHH
T ss_pred             hhcCCCccccccCCCCcccCHHHHcC-CCCCCcccchhhhHHH-HHHHcCC-------------CCCCC-CCHHHHHHHH
Confidence            8875433221       129998876 5688999999996554 3332100             00001 1112221111


Q ss_pred             HhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          251 TKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       251 ~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ....        ...+.+-.+.+-+++..|++.|++++|.+.+
T Consensus       229 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         229 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1111        1234444445555678889999999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=311.14  Aligned_cols=239  Identities=15%  Similarity=0.197  Sum_probs=179.7

Q ss_pred             cce-eeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec----C
Q 042392           25 LHY-SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED----E   99 (436)
Q Consensus        25 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----~   99 (436)
                      ++| ++.+.||+|+||+||+|++..+++.||+|++......  ......+.+|+++|+.+ +|||||++++++..    .
T Consensus         8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~   84 (270)
T d1t4ha_           8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK   84 (270)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSC
T ss_pred             CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccC
Confidence            345 7888999999999999999999999999998765433  23456789999999999 69999999999865    4


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--VMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      ..+|+|||||++|+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||+.  +.++.+||+|||+|
T Consensus        85 ~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla  162 (270)
T d1t4ha_          85 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA  162 (270)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGG
T ss_pred             CEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcc
Confidence            568999999999999999999889999999999999999999999998  99999999999993  24679999999999


Q ss_pred             ccccccCC------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          178 LLFEEEGG------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       178 ~~~~~~~~------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      +.......      ....|||++.+  .|+.++||||+|+++ .+.++..             .+-.+.-+..++...+.
T Consensus       163 ~~~~~~~~~~~~GT~~Y~aPE~~~~--~~~~~~DIwSlGvil-yel~~g~-------------~Pf~~~~~~~~~~~~i~  226 (270)
T d1t4ha_         163 TLKRASFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCM-LEMATSE-------------YPYSECQNAAQIYRRVT  226 (270)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHH-HHHHHSS-------------CTTTTCSSHHHHHHHHT
T ss_pred             eeccCCccCCcccCccccCHHHhCC--CCCCcCchhhHHHHH-HHHHHCC-------------CCCCCcccHHHHHHHHH
Confidence            86544321      22339998764  689999999996554 3332100             00011122222222222


Q ss_pred             h------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          252 K------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       252 ~------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .      +....+.+-.+.+-+++..|++.|+++.|.+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         227 SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            1      11123333334455567788889999988764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-41  Score=318.40  Aligned_cols=184  Identities=22%  Similarity=0.341  Sum_probs=162.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+..... ......+.+|+.+|+.+ +|||||++++++.+.+.+|
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~   80 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIF   80 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC-HHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeee
Confidence            367999999999999999999999999999999997643222 23456788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|||||+||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        81 ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          81 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC
T ss_pred             eEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc
Confidence            999999999999999999899999999999999999999999999999999999999   78899999999999987654


Q ss_pred             CCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...     ...|||++.+ ..|+.++|+||+|+++
T Consensus       158 ~~~~~Gt~~Y~APE~l~~-~~y~~~~DiwSlGvil  191 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILI  191 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHH
T ss_pred             cccccCcccccCHHHHcC-CCCCchhhccccchhH
Confidence            332     2238998866 4688999999996554

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=6.1e-41  Score=307.46  Aligned_cols=245  Identities=24%  Similarity=0.303  Sum_probs=187.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch-----hhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-----AENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.+......     ......+.+|+.+++.|..||||+++++++.
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            35789999999999999999999999999999999987643321     2234568899999999966999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                      +++.+|+|||||+||+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a  157 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFS  157 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhe
Confidence            999999999999999999999999999999999999999999999999999999999999999   78899999999999


Q ss_pred             ccccccCCCC-------CCChHHHHHHH-----HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          178 LLFEEEGGEA-------SDDTSVILRMK-----QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       178 ~~~~~~~~~~-------~~~pe~~~~~~-----~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +.+.......       ..+||.+.+..     .|+.++|+||+|++++ +++...             .+-.+.-....
T Consensus       158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily-eml~g~-------------~Pf~~~~~~~~  223 (277)
T d1phka_         158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY-TLLAGS-------------PPFWHRKQMLM  223 (277)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH-HHHHSS-------------CSSCCSSHHHH
T ss_pred             eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh-hhccCC-------------CCCCCCCHHHH
Confidence            8876532221       12888887543     3567899999955543 332100             00011111111


Q ss_pred             HHHHHHhc-------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          246 LRAGLTKV-------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       246 L~~~l~~~-------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      +...+..-       ....+++-.+.+.+.+..|+..|++.+|.+.
T Consensus       224 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         224 LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            11112110       1134555555666677888888999888654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.1e-41  Score=322.80  Aligned_cols=244  Identities=21%  Similarity=0.296  Sum_probs=186.0

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+.++|++++.||+|+||.||+|+++.+|+.||||++.....    .....+.+|+.+|+.| +|||||+++++|.+++
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~   99 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP----LDKYTVKNEISIMNQL-HHPKLINLHDAFEDKY   99 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH----HHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch----hHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence            4466889999999999999999999999999999999976542    3345788999999999 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+|||||+||+|.+++...+ ++++..++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+|+.
T Consensus       100 ~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~  178 (352)
T d1koba_         100 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATK  178 (352)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeeccccee
Confidence            9999999999999999887654 5999999999999999999999999999999999999942 2467999999999998


Q ss_pred             ccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh
Q 042392          180 FEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK  252 (436)
Q Consensus       180 ~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~  252 (436)
                      +......       ...|||++.+ ..|+.++|+||+|+++ .++++..             .+-.|.-..+.+....+.
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil-yelltG~-------------~Pf~~~~~~~~~~~i~~~  243 (352)
T d1koba_         179 LNPDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLG-YVLLSGL-------------SPFAGEDDLETLQNVKRC  243 (352)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHH-HHHHHSC-------------CSSCCSSHHHHHHHHHHC
T ss_pred             cCCCCceeeccCcccccCHHHHcC-CCCCCccchHHHHHHH-HHHHhCC-------------CCCCCCCHHHHHHHHHhC
Confidence            7653221       1228988876 5689999999995544 3332100             000111111111111111


Q ss_pred             -------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          253 -------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       253 -------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                             .....+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       244 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         244 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   012344444555666778889999999888753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-41  Score=308.95  Aligned_cols=248  Identities=16%  Similarity=0.158  Sum_probs=188.9

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      |.+...|+...++|++.+.||+|+||.||+|+++ ++..||||++.....     ....+.+|+.+|+.+ +|||||+++
T Consensus         2 p~~~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~   74 (272)
T d1qpca_           2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-----SPDAFLAEANLMKQL-QHQRLVRLY   74 (272)
T ss_dssp             CTTTCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-----CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             CCCCCCeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC-----CHHHHHHHHHHHHhC-CCCCEeEEE
Confidence            6667788888999999999999999999999975 678899999975432     235689999999999 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEE
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV  171 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl  171 (436)
                      +++.. +.+|+|||||++|+|.+++...  .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||
T Consensus        75 g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl  150 (272)
T d1qpca_          75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKI  150 (272)
T ss_dssp             EEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEE
T ss_pred             eeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceee
Confidence            98754 5679999999999999877543  358999999999999999999999999999999999999   78899999


Q ss_pred             EecCCcccccccCC---------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccC
Q 042392          172 TDFGSALLFEEEGG---------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLS  242 (436)
Q Consensus       172 ~DFG~a~~~~~~~~---------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~  242 (436)
                      +|||+|+.+.....         ....|||.+.+ ..|+.++|+||+|+.++ +.++.             ..++....+
T Consensus       151 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl~-ellt~-------------~~~~~~~~~  215 (272)
T d1qpca_         151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLT-EIVTH-------------GRIPYPGMT  215 (272)
T ss_dssp             CCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHH-HHHTT-------------TCCSSTTCC
T ss_pred             ccccceEEccCCccccccccCCcccccChHHHhC-CCCCchhhhhhhHHHHH-HHHhC-------------CCCCCCCCC
Confidence            99999987754221         11238998875 57899999999955543 33211             111222233


Q ss_pred             HHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          243 YDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       243 ~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ..++...+..-     ....+.+-.+.+-+++..|++.|+++.|.+..+.
T Consensus       216 ~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         216 NPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            34443333321     1223443344455567888999999999886543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-41  Score=316.63  Aligned_cols=241  Identities=19%  Similarity=0.318  Sum_probs=184.8

Q ss_pred             ccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++....     .....+.+|+++|+.+ +|||||+++++|.+.+.
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~   75 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIA-RHRNILHLHESFESMEE   75 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence            46789999999999999999999999999999999997653     2335688999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +|+|||||+||+|.+++...+ ++++.+++.++.||+.||.|||++||+||||||+|||+.. +....+||+|||+|+..
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhcc
Confidence            999999999999999998765 6999999999999999999999999999999999999943 24468999999999876


Q ss_pred             cccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc
Q 042392          181 EEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV  253 (436)
Q Consensus       181 ~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~  253 (436)
                      .....       ....+||.+.+ ..|+.++|+||+|+.+ .+.+..              ..+-..-+..++...+...
T Consensus       155 ~~~~~~~~~~~t~~y~ape~~~~-~~~~~~~DiWSlGvil-y~ll~G--------------~~Pf~~~~~~~~~~~i~~~  218 (321)
T d1tkia_         155 KPGDNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLV-YVLLSG--------------INPFLAETNQQIIENIMNA  218 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHH-HHHHHS--------------SCTTCCSSHHHHHHHHHHT
T ss_pred             ccCCcccccccccccccchhccC-CCCCchhhcccHHHHH-HHHHhC--------------CCCCCCCCHHHHHHHHHhC
Confidence            54321       11227887765 5688999999995554 333210              0110011222222222211


Q ss_pred             C--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          254 G--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       254 ~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .        ..++.+-.+.+-+++..|++.|++++|.+.+
T Consensus       219 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1        1234444455555678899999999998764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-41  Score=318.59  Aligned_cols=184  Identities=27%  Similarity=0.390  Sum_probs=162.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      .++|++++.||+|+||.||+|+++.+|+.||||++.+..... ......+.+|+.+|+.+ +|||||++++++.....+|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccC-HHHHHHHHHHHHHHHHc-CCCcEeecccccccccccc
Confidence            578999999999999999999999999999999997543222 23345688999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +||||+.||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+...
T Consensus       118 ~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC
T ss_pred             cccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc
Confidence            999999999999999998999999999999999999999999999999999999999   77889999999999987654


Q ss_pred             CCC-----CCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          184 GGE-----ASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       184 ~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      ...     ...|||++.+ ..|+.++|+||+|+++
T Consensus       195 ~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvil  228 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLI  228 (350)
T ss_dssp             BCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHH
T ss_pred             cccccCccccCCHHHHcC-CCCCccccccchhHHH
Confidence            322     1229999876 5688999999996554

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.4e-41  Score=318.40  Aligned_cols=245  Identities=23%  Similarity=0.310  Sum_probs=183.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHH---HHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE---IQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E---~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      +++|+++++||+|+||.||+|+++.+|+.||||++.+..... ......+.+|   +.+++.+ +|||||++++++.+.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~-~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-HTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSS
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcch-hhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECC
Confidence            468999999999999999999999999999999997543222 1223334444   5556666 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||+||+|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF  157 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEEC
T ss_pred             EEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeec
Confidence            999999999999999999999999999999999999999999999999999999999999   78899999999999977


Q ss_pred             cccCCCC------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh--
Q 042392          181 EEEGGEA------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--  252 (436)
Q Consensus       181 ~~~~~~~------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~--  252 (436)
                      .......      ..|||++.+...|+.++|+||+|+++ .++++..      ..|   ...  ......++......  
T Consensus       158 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvil-yemltG~------~Pf---~~~--~~~~~~~~~~~~~~~~  225 (364)
T d1omwa3         158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML-FKLLRGH------SPF---RQH--KTKDKHEIDRMTLTMA  225 (364)
T ss_dssp             SSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH-HHHHHSS------CSS---CSS--CSSCHHHHHHHSSSCC
T ss_pred             CCCcccccccccccchhHHhhcCCCCCcccchhHHHHHH-HHHHhCC------CCC---CCC--CHHHHHHHHHhcccCC
Confidence            5533221      22999997666789999999995544 3333110      001   100  01112222222111  


Q ss_pred             --cCCCCCHHHHHHHHHHHcCCCCCcccH-----HHHHHH
Q 042392          253 --VGSMLTEFDVKQLMEAADMDGNGAIDY-----TEFTAA  285 (436)
Q Consensus       253 --~~~~~s~~~i~~l~~~~d~d~~g~i~~-----~EF~~~  285 (436)
                        +...++.+-.+.+.+++..|++.|++.     +|.+.+
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence              122455555666777788899999884     665543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-41  Score=313.98  Aligned_cols=248  Identities=17%  Similarity=0.190  Sum_probs=186.6

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeece
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNM-----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELK   93 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   93 (436)
                      .|+...++|+++++||+|+||+||+|++..+++     .||+|.+.....   ......+.+|+.+|+.+.+|||||+++
T Consensus        31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~l~  107 (325)
T d1rjba_          31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLL  107 (325)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC---HHHHHHHHHHHHHHHHhcCCCcEeEEE
Confidence            466777899999999999999999999876554     699998865432   223456889999999986699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           94 SAHEDETAVHVVMELCQGGDLFDRIIAKG-----------------------YYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      +++.+.+.+|+|||||++|+|.+++.+..                       .+++..++.++.||+.||.|||+++|+|
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiH  187 (325)
T d1rjba_         108 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  187 (325)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            99999999999999999999999997642                       4788999999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG  220 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~  220 (436)
                      |||||+|||+   +.++.+||+|||+|+........          ...|||++.+ ..|+.++|+||+|++ +.+.++.
T Consensus       188 RDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvi-l~emlt~  262 (325)
T d1rjba_         188 RDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGIL-LWEIFSL  262 (325)
T ss_dssp             TTCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHH-HHHHTTT
T ss_pred             ccCchhcccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC-CCCCcceeccchhHH-HHHHHhC
Confidence            9999999999   67889999999999876553321          1238998876 578999999999554 4444321


Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .            -.+-.|.-....+...+..     .....+.+-.+.+-+++..|++.|++++|.+..+
T Consensus       263 g------------~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L  321 (325)
T d1rjba_         263 G------------VNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  321 (325)
T ss_dssp             S------------CCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             C------------CCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            0            0011122222334444332     1123344444455566788999999999988765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-40  Score=301.20  Aligned_cols=238  Identities=16%  Similarity=0.207  Sum_probs=177.0

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|++.+.||+|+||.||+|++. ++..||||++.....     ....+.+|+.+++.+ +|||||++++++..++.+|+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS-----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC-----cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEE
Confidence            57999999999999999999985 577899999876432     235689999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      |||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        78 v~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC--------
T ss_pred             EEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCC
Confidence            99999999999998765 458899999999999999999999999999999999999   77889999999999876543


Q ss_pred             CCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          184 GGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       184 ~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ...         ...|||++.+ ..|+.++|+||+|+.+ .+.++.             ...+....+..++...+..- 
T Consensus       155 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvil-~el~t~-------------~~~~~~~~~~~~~~~~i~~~~  219 (263)
T d1sm2a_         155 QYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLM-WEVFSE-------------GKIPYENRSNSEVVEDISTGF  219 (263)
T ss_dssp             ----------CTTSCCHHHHTT-CCCCHHHHHHHHHHHH-HHHHTT-------------SCCTTCSCCHHHHHHHHHHTC
T ss_pred             CceeecceecCcccCChHHhcC-CCCCchhhhcchHHHH-HHHHHC-------------CCCCCCCCCHHHHHHHHHhcC
Confidence            221         2238998876 4689999999995554 332211             11112223344443333321 


Q ss_pred             ----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          254 ----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       254 ----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                          ....+.+-.+.+-+++..|++.|+++.|.+..+.
T Consensus       220 ~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~  257 (263)
T d1sm2a_         220 RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA  257 (263)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence                1122333334455567888999999999887653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=313.30  Aligned_cols=246  Identities=25%  Similarity=0.343  Sum_probs=179.9

Q ss_pred             ccccccceeeee-eecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           20 YEDVMLHYSFGR-MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        20 ~~~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      ...+.++|.+.+ +||+|+||+||+|++..+++.||||++...         ..+.+|+.++.++.+|||||+++++|++
T Consensus         6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~---------~~~~~E~~~~~~~~~hpnIv~l~~~~~~   76 (335)
T d2ozaa1           6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYEN   76 (335)
T ss_dssp             CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc---------HHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            345678999875 699999999999999999999999998643         2467899987665579999999999875


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           99 ----ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        99 ----~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                          ...+|+|||||+||+|.+++.+.+  ++++.+++.++.||+.||.|||++||+||||||+|||+...+..+.+||+
T Consensus        77 ~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~  156 (335)
T d2ozaa1          77 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  156 (335)
T ss_dssp             EETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred             cccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccc
Confidence                467999999999999999998753  59999999999999999999999999999999999999655557789999


Q ss_pred             ecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChh-------hHHHHHHHhhhhCCCCC
Q 042392          173 DFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGE-------ETQALKEKFIEMDTDKN  238 (436)
Q Consensus       173 DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e-------~~~~l~~~F~~~D~~~~  238 (436)
                      |||+|+........       ...|||++.+ ..|+.++|+||+|+ ++.+.++..       .......+...+-....
T Consensus       157 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~y~~~~DiwSlGv-ily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~  234 (335)
T d2ozaa1         157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY  234 (335)
T ss_dssp             CCTTCEECCCCCCCCCCSCCCSSCCCCCCCG-GGGSHHHHHHHHHH-HHHHHTTSSCSCEETTCC--------CCCSCSS
T ss_pred             ccceeeeccCCCccccccCCcccCCcHHHcC-CCCCHHHHHHhhch-hHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence            99999876553322       1228998766 57899999999954 444443211       11111111111100000


Q ss_pred             CccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          239 GTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                       .+....        ...++.+-.+.+-+++..|++.|+++.|.+.+
T Consensus       235 -~~~~~~--------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         235 -EFPNPE--------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             -SCCTTH--------HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -CCCCcc--------cccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence             000000        00234444555666778899999999998764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=309.41  Aligned_cols=240  Identities=20%  Similarity=0.273  Sum_probs=181.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHH-hcCCCCCeeeceeeeecCCeE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR-LLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~-~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +++|+++++||+|+||+||+|+++.+|+.||||++.+..... ......+.+|..++. .+ +|||||++++++.+++.+
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~~~~~~~e~~~l~~~~-~hp~Iv~~~~~~~~~~~~   78 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAW-EHPFLTHMFCTFQTKENL   78 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHT-TCTTBCCEEEEEECSSEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHHHHHHHHHHHHHHHhC-CCCcEEEEEEEEccCCce
Confidence            368999999999999999999999999999999997643222 223345566766655 57 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      |+|||||+||+|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+....
T Consensus        79 yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          79 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCC
T ss_pred             eEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhccc
Confidence            9999999999999999998899999999999999999999999999999999999999   7889999999999986643


Q ss_pred             cCCCC--------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          183 EGGEA--------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       183 ~~~~~--------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      .....        ..|||++.+ ..|+.++|+||+|+.+ .+++...             .+-.| -+..++...+..- 
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil-yemltG~-------------~PF~~-~~~~~~~~~i~~~~  219 (320)
T d1xjda_         156 GDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLL-YEMLIGQ-------------SPFHG-QDEEELFHSIRMDN  219 (320)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHH-HHHHHSS-------------CSSCC-SSHHHHHHHHHHCC
T ss_pred             ccccccccCCCCCcCCHHHHcC-CCCCchhhhhhhhHHH-HHHHhCC-------------CCCCC-CCHHHHHHHHHcCC
Confidence            22211        128998876 4688999999995544 3333110             01111 1233333333221 


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCCCCcccHH-HHHH
Q 042392          254 ---GSMLTEFDVKQLMEAADMDGNGAIDYT-EFTA  284 (436)
Q Consensus       254 ---~~~~s~~~i~~l~~~~d~d~~g~i~~~-EF~~  284 (436)
                         ...++.+-.+.+-+++..|++.|++.. |++.
T Consensus       220 ~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         220 PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence               123444444555566788888888874 5543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.9e-40  Score=304.63  Aligned_cols=245  Identities=16%  Similarity=0.225  Sum_probs=177.7

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNM---PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHE   97 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   97 (436)
                      +...++|++.+.||+|+||+||+|+++.+++   .||||.+.....   ......+.+|+.+|+.+ +|||||++++++.
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~   97 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT---EKQRRDFLSEASIMGQF-DHPNVIHLEGVVT   97 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC---HHHHHHHHHHHHHHHhC-CCCCCccEEEEEe
Confidence            3445789999999999999999999987765   588888765432   23456789999999999 6999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           98 DETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        98 ~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .++.+|+|||||++|+|.+++... +.+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGl  174 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGL  174 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC--
T ss_pred             eCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCccc
Confidence            999999999999999999988874 469999999999999999999999999999999999999   7889999999999


Q ss_pred             cccccccCCC-------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCH
Q 042392          177 ALLFEEEGGE-------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSY  243 (436)
Q Consensus       177 a~~~~~~~~~-------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~  243 (436)
                      |+.+......             ...|||.+.+ ..|+.++||||+|++++ +.++             ....+-...+.
T Consensus       175 a~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~-el~t-------------~g~~Pf~~~~~  239 (299)
T d1jpaa_         175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMW-EVMS-------------YGERPYWDMTN  239 (299)
T ss_dssp             ---------------------CGGGSCHHHHHS-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCH
T ss_pred             ceEccCCCCcceeeecccccCCccccCHHHHhc-CCCCcccccccchHHHH-HHHh-------------CCCCCCCCCCH
Confidence            9876543211             1228888775 57889999999955543 3221             01111122334


Q ss_pred             HHHHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          244 DELRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       244 ~eL~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .++...+.. .    ....+.+-.+.+.+++..|++.|+++.|.+..+.
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~  288 (299)
T d1jpaa_         240 QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD  288 (299)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            444444332 1    1122333344455567789999999999887653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.9e-40  Score=303.19  Aligned_cols=246  Identities=23%  Similarity=0.259  Sum_probs=185.6

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||||++.+..... ......+.+|+.+++.+ +||||+++++++...+
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD-PSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAET   80 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTC-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEC
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccC-HHHHHHHHHHHHHHHhc-CCCCCCcccceeeecc
Confidence            356788999999999999999999999999999999998765443 44566789999999999 6999999999987653


Q ss_pred             ----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          101 ----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       101 ----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                          .+|+|||||+|++|.+++...+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.++++|||.
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~  157 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGI  157 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTT
T ss_pred             CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhh
Confidence                489999999999999999999999999999999999999999999999999999999999   6788999999999


Q ss_pred             cccccccC-----------CCCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          177 ALLFEEEG-----------GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       177 a~~~~~~~-----------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +.......           .....|||++.+ ..|+.++|+||+|++++ +.++..             .+-.+.-..+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DiwSlGvily-elltG~-------------~Pf~~~~~~~~  222 (277)
T d1o6ya_         158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLY-EVLTGE-------------PPFTGDSPVSV  222 (277)
T ss_dssp             CEECC----------------TTCCHHHHTT-CCCCHHHHHHHHHHHHH-HHHHSS-------------CSCCCSSHHHH
T ss_pred             hhhhccccccccccccccCcccccCHHHHcC-CCCCcceecccchHHHH-HHHhCC-------------CCCCCcCHHHH
Confidence            87654321           112238999866 46889999999966543 322100             00011111111


Q ss_pred             HHHHHHh-------cCCCCCHHHHHHHHHHHcCCCCCcc-cHHHHHHHH
Q 042392          246 LRAGLTK-------VGSMLTEFDVKQLMEAADMDGNGAI-DYTEFTAAT  286 (436)
Q Consensus       246 L~~~l~~-------~~~~~s~~~i~~l~~~~d~d~~g~i-~~~EF~~~~  286 (436)
                      +...++.       ....++.+-.+.+.+++..|++.|+ +.+|++..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l  271 (277)
T d1o6ya_         223 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL  271 (277)
T ss_dssp             HHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHH
Confidence            2222221       1223444445556666778888888 677776544

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-41  Score=312.93  Aligned_cols=252  Identities=18%  Similarity=0.208  Sum_probs=186.0

Q ss_pred             eeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch-hhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEe
Q 042392           29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVME  107 (436)
Q Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e  107 (436)
                      .+++||+|+||+||+|+++.+|+.||||++........ ......+.+|+.+|+.+ +|||||++++++..++.+|+|||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence            46889999999999999999999999999876543221 12234688999999999 69999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCC-
Q 042392          108 LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE-  186 (436)
Q Consensus       108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~-  186 (436)
                      ||.++++..+......+++..++.+++||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+........ 
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~  157 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY  157 (299)
T ss_dssp             CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred             hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence            99987776666556679999999999999999999999999999999999999   78899999999999876543221 


Q ss_pred             -------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCccC-HHHHH----
Q 042392          187 -------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGTLS-YDELR----  247 (436)
Q Consensus       187 -------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~i~-~~eL~----  247 (436)
                             ...|||++.+...|+.++|+||+|+++ .+.+       +....+.+..++..+..+...... ...+.    
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil-~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL-AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT  236 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH-HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHH-HHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhh
Confidence                   122999998777899999999996654 3332       234556666666655433221100 00000    


Q ss_pred             ------HHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          248 ------AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       248 ------~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                            .-+.......+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence                  00111122445555666777888999999999887753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=303.34  Aligned_cols=244  Identities=17%  Similarity=0.231  Sum_probs=180.7

Q ss_pred             cccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec
Q 042392           19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED   98 (436)
Q Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   98 (436)
                      .|+...++|++.+.||+|+||.||+|+.+   ..||||+++......  .....+.+|+.+|+.+ +|||||+++++...
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~--~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~   75 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTP--QQLQAFKNEVGVLRKT-RHVNILLFMGYSTA   75 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCT--THHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCH--HHHHHHHHHHHHHHhC-CCCCEeeeeEEEec
Confidence            46777889999999999999999999853   369999997654332  4456789999999999 69999999998754


Q ss_pred             CCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                       +.+|+|||||++|+|.+++... .++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|
T Consensus        76 -~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla  151 (276)
T d1uwha_          76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA  151 (276)
T ss_dssp             -SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCS
T ss_pred             -cEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccce
Confidence             5689999999999999999765 569999999999999999999999999999999999999   67889999999999


Q ss_pred             ccccccCC----------CCCCChHHHHHH--HHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          178 LLFEEEGG----------EASDDTSVILRM--KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       178 ~~~~~~~~----------~~~~~pe~~~~~--~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      +.......          ....|||++.+.  ..|+.++|+||+|++++ +.++..             .+-.+.-....
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~-el~tg~-------------~Pf~~~~~~~~  217 (276)
T d1uwha_         152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY-ELMTGQ-------------LPYSNINNRDQ  217 (276)
T ss_dssp             CC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHH-HHHHSS-------------CTTTTCCCHHH
T ss_pred             eeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHH-HHHHCC-------------CCCCCCChHHH
Confidence            87643211          112299998643  35889999999966543 322100             01111122223


Q ss_pred             HHHHHHh---------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          246 LRAGLTK---------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       246 L~~~l~~---------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +...+..         .....+.+-.+.+.+++..|++.|+++.|.+..+
T Consensus       218 ~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~L  267 (276)
T d1uwha_         218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI  267 (276)
T ss_dssp             HHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            3322222         1222333334455667788999999999988765

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=309.46  Aligned_cols=255  Identities=23%  Similarity=0.246  Sum_probs=187.1

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++++.||+|+||+||+|++..+|+.||||++......  ......+.+|+++|+.+ +|||||++++++.+++.+|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLY   77 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC--hHHHHHHHHHHHHHHhC-CCCcEEEecccccccccee
Confidence            46899999999999999999999999999999999654322  23346788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          104 VVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      +|||||.+ ++.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        78 iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          78 LVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             EEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHC
T ss_pred             EEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceecc
Confidence            99999976 666666543  459999999999999999999999999999999999999   778899999999998765


Q ss_pred             ccCCC--------CCCChHHHHHHHHHHHhhhhhhHHHHHHHh---cC---ChhhHHHHHHHhhhhCCCCCCccCH-HHH
Q 042392          182 EEGGE--------ASDDTSVILRMKQFRRMSKLKKLTVKVIVE---YL---PGEETQALKEKFIEMDTDKNGTLSY-DEL  246 (436)
Q Consensus       182 ~~~~~--------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~---~l---~~e~~~~l~~~F~~~D~~~~g~i~~-~eL  246 (436)
                      .....        ...+||++.....++.++|+||+|++++..   ..   +......+..++............. ..+
T Consensus       154 ~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (298)
T d1gz8a_         154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM  233 (298)
T ss_dssp             CCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccc
Confidence            43221        222899888877778999999996665432   22   2233445555554443322211100 000


Q ss_pred             HH-----------HHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          247 RA-----------GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       247 ~~-----------~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..           -+.......+.+-.+.+-+++..|++.|++..|.+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00           0011122445555566667788888999999887754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-39  Score=294.66  Aligned_cols=237  Identities=16%  Similarity=0.221  Sum_probs=183.8

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHV  104 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~i  104 (436)
                      ++|+++++||+|+||.||+|+++ +++.||||++++....     ...+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~i   76 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-----EDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFI   76 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC-----HHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC-----HHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEE
Confidence            57999999999999999999984 7889999999865432     35689999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          105 VMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       105 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ||||+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||+|+.+...
T Consensus        77 v~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          77 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             EEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSS
T ss_pred             EEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCC
Confidence            99999999999987654 568999999999999999999999999999999999999   77889999999999876543


Q ss_pred             CCCC---------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-
Q 042392          184 GGEA---------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-  253 (436)
Q Consensus       184 ~~~~---------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-  253 (436)
                      ....         ..|||.+.+ ..|+.++|+||+|+.++ +.++             .+..+-+..+..++...+..- 
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~-el~t-------------~g~~Pf~~~~~~~~~~~i~~~~  218 (258)
T d1k2pa_         154 EYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMW-EIYS-------------LGKMPYERFTNSETAEHIAQGL  218 (258)
T ss_dssp             SCCCCCCSCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHT-------------TSCCTTTTSCHHHHHHHHHTTC
T ss_pred             CceeecccCCCCCcCCcHHhcC-CCCCcceeecccchhhH-hHHh-------------cCCCCCCCCCHHHHHHHHHhCC
Confidence            3221         127888776 56889999999966543 2221             011222233445554444331 


Q ss_pred             C---CCCCHHHH-HHHHHHHcCCCCCcccHHHHHHHH
Q 042392          254 G---SMLTEFDV-KQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       254 ~---~~~s~~~i-~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .   +.....++ +.+-+++..|++.|++++|.+..+
T Consensus       219 ~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L  255 (258)
T d1k2pa_         219 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI  255 (258)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHh
Confidence            1   11122344 445556788899999999988765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=297.72  Aligned_cols=245  Identities=19%  Similarity=0.209  Sum_probs=181.1

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      ...|+.-.++|++.+.||+|+||.||+|+++.+ ..||||++......     .+.+.+|+.+|+.+ +|||||++++++
T Consensus         9 ~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~-----~~~~~~E~~~l~~l-~h~nIv~~~g~~   81 (285)
T d1fmka3           9 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS-----PEAFLQEAQVMKKL-RHEKLVQLYAVV   81 (285)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSC-----HHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             CcceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCC-----HHHHHHHHHHHHhc-ccCCEeEEEEEE
Confidence            456777789999999999999999999998655 57999999755432     35689999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIA--KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                      .. +.+|+|||||++|+|..++..  ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        82 ~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~Df  157 (285)
T d1fmka3          82 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADF  157 (285)
T ss_dssp             CS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCC
T ss_pred             ec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEccc
Confidence            54 568999999999999988865  3569999999999999999999999999999999999999   77789999999


Q ss_pred             CCcccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHH
Q 042392          175 GSALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDE  245 (436)
Q Consensus       175 G~a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~e  245 (436)
                      |+|+........         ...|||.+.. ..|+.++||||+|++++ +.++.            -..+..+ ....+
T Consensus       158 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil~-el~t~------------~~p~~~~-~~~~~  222 (285)
T d1fmka3         158 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLT-ELTTK------------GRVPYPG-MVNRE  222 (285)
T ss_dssp             CTTC--------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT------------TCCSSTT-CCHHH
T ss_pred             chhhhccCCCceeeccccccccccChHHHhC-CCCCcHHhhhcchHHHH-HHHhC------------CCCCCCC-CCHHH
Confidence            999876443221         1228888865 57889999999965553 32210            0011111 22222


Q ss_pred             HHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          246 LRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       246 L~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +...+..     .....+++-.+.+.++++.|++.|+++++.+..+.
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~  269 (285)
T d1fmka3         223 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE  269 (285)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHh
Confidence            3222221     12233444445566677888999999998776543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=298.60  Aligned_cols=234  Identities=16%  Similarity=0.151  Sum_probs=175.8

Q ss_pred             eeecccCCeEEEEEEEC--CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEEEEEec
Q 042392           31 RMLGRGRFGVTYLCTEN--STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMEL  108 (436)
Q Consensus        31 ~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~iv~e~  108 (436)
                      +.||+|+||.||+|.+.  .+++.||||++......  ......+.+|+.+|+++ +|||||++++++.. +.+|+||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~-~~~~lvmE~   88 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEM   88 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEES-SSEEEEEEC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCC--HHHHHHHHHHHHHHHhC-CCCCCceEEEEecc-CCEEEEEEc
Confidence            47999999999999864  45678999999755432  34456789999999999 69999999999865 457899999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccccCC---
Q 042392          109 CQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG---  185 (436)
Q Consensus       109 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---  185 (436)
                      |++|+|.+++.+..++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.+.....   
T Consensus        89 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          89 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhccccccccc
Confidence            9999999999998889999999999999999999999999999999999999   6778999999999987644221   


Q ss_pred             --------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----
Q 042392          186 --------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----  252 (436)
Q Consensus       186 --------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----  252 (436)
                              ....|||.+.+ ..|+.++|+||+|++++ +.++             ....+-...+..++...+..     
T Consensus       166 ~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~-ellt-------------~g~~Pf~~~~~~~~~~~i~~~~~~~  230 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMW-EAFS-------------YGQKPYRGMKGSEVTAMLEKGERMG  230 (277)
T ss_dssp             C----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHH-HHHT-------------TTCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred             cccccCCCceecCchhhcC-CCCCchhhhccchhhhh-HHhh-------------CCCCCCCCCCHHHHHHHHHcCCCCC
Confidence                    11228998876 56889999999965543 3221             01111112334444444433     


Q ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       253 ~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .....+.+-.+.+.+++..|++.|+++.+....+
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L  264 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL  264 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHh
Confidence            1122344444555566788999999999986544

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-39  Score=300.75  Aligned_cols=254  Identities=17%  Similarity=0.195  Sum_probs=181.9

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCC
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN   88 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~n   88 (436)
                      |.-.+.|+...++|++++.||+|+||.||+|++..     +++.||||++.....   ......+.+|..++..+.+|||
T Consensus         2 p~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~~~~e~~~l~~~~~h~~   78 (299)
T d1ywna1           2 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLN   78 (299)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C---HHHHHHHHHHHHHHHHHCCCTT
T ss_pred             CCCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---cHHHHHHHHHHHHHHhhcCCCe
Confidence            44445677778899999999999999999999754     456899999865432   2334567788888888767999


Q ss_pred             eeeceeeeecC-CeEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Q 042392           89 IVELKSAHEDE-TAVHVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHR  151 (436)
Q Consensus        89 iv~~~~~~~~~-~~~~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hr  151 (436)
                      |+.+++++... ..+|+|||||++|+|.+++...                ..+++..+..++.||+.||.|||+++|+||
T Consensus        79 iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHr  158 (299)
T d1ywna1          79 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR  158 (299)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence            99999987654 5689999999999999999763                237899999999999999999999999999


Q ss_pred             cCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChh
Q 042392          152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGE  221 (436)
Q Consensus       152 dlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e  221 (436)
                      ||||+|||+   +.++.+||+|||+|+........          ...|||++.+ ..|+.++|+||+|+.+ .+.++. 
T Consensus       159 DlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil-~ellt~-  232 (299)
T d1ywna1         159 DLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLL-WEIFSL-  232 (299)
T ss_dssp             CCCGGGEEE---CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHHTT-
T ss_pred             cCCccceeE---CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhc-CCCCcccceeehHHHH-HHHHhC-
Confidence            999999999   77889999999999876443221          1228998876 5789999999995544 332211 


Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                                 .-.+..+.-..+++...+..-     ....+.+-.+.+.+++..|++.|+++.|.+.++.
T Consensus       233 -----------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~  292 (299)
T d1ywna1         233 -----------GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  292 (299)
T ss_dssp             -----------SCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -----------CCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence                       011112222233444443331     1233444455666677889999999999987754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=303.40  Aligned_cols=240  Identities=23%  Similarity=0.327  Sum_probs=184.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccch--hhHHHHHHHHHHHHHhcC-CCCCeeeceeeeecC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS-GQPNIVELKSAHEDE   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~~~~   99 (436)
                      +.++|++.+.||+|+||.||+|++..+|+.||||++.+......  ......+.+|+.+|+.+. .|||||++++++.++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            45789999999999999999999999999999999976532211  111223568999999984 389999999999999


Q ss_pred             CeEEEEEeccCC-CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcc
Q 042392          100 TAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL  178 (436)
Q Consensus       100 ~~~~iv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~  178 (436)
                      +.+|+||||+.+ +++.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+.  .+.+.+||+|||+|+
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGA  159 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred             CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccce
Confidence            999999999976 68889998888999999999999999999999999999999999999993  244789999999998


Q ss_pred             cccccCCCC------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcC----ChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          179 LFEEEGGEA------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYL----PGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       179 ~~~~~~~~~------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l----~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      .........      ..|||++.+...++.++|+||+|+++ .+.+    +.+..                    +++..
T Consensus       160 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~--------------------~~i~~  218 (273)
T d1xwsa_         160 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL-YDMVCGDIPFEHD--------------------EEIIR  218 (273)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH-HHHHHSSCSCCSH--------------------HHHHH
T ss_pred             ecccccccccccCCCcCCHHHHcCCCCCCcccccccceeee-hhHhhCCCCCCCc--------------------hHHhh
Confidence            765433221      12899998766678899999995554 3332    11111                    11111


Q ss_pred             HHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          249 GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       249 ~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ....+...++.+-.+.+-+++..|++.|++++|.+.+
T Consensus       219 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         219 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1112334455555555566778899999999997754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-39  Score=295.10  Aligned_cols=244  Identities=18%  Similarity=0.231  Sum_probs=180.5

Q ss_pred             cccccceeeeeeecccCCeEEEEEEECCCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTN----MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      |.-.+.|++.++||+|+||.||+|.++.++    ..||||++.....   ......+.+|+.+++.+ +|||||++++++
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~~~g~~   78 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---EKQRVDFLGEAGIMGQF-SHHNIIRLEGVI   78 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC---hHHHHHHHHHHHHHHhc-CCCCEeeeeEEE
Confidence            334467999999999999999999987654    4799999865443   23345688999999999 699999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      .....+++|||||.++++.+++... +.+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||
T Consensus        79 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG  155 (283)
T d1mqba_          79 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFG  155 (283)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCC
T ss_pred             ecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccc
Confidence            9999999999999999999988765 569999999999999999999999999999999999999   788999999999


Q ss_pred             CcccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHH
Q 042392          176 SALLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD  244 (436)
Q Consensus       176 ~a~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~  244 (436)
                      +|+.+......           ...|||.+.+ ..|+.++||||+|+.+ .+.++.             ........+..
T Consensus       156 la~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~sDI~S~Gvil-~el~t~-------------~~~~~~~~~~~  220 (283)
T d1mqba_         156 LSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVM-WEVMTY-------------GERPYWELSNH  220 (283)
T ss_dssp             C-----------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHH-HHHHTT-------------SCCTTTTCCHH
T ss_pred             hhhcccCCCccceEeccCCCCccccCHHHHcc-CCCCCcccccccHHHH-HHHHhC-------------CCCccccCCHH
Confidence            99876442211           1238998876 5788999999995554 333210             11222223444


Q ss_pred             HHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          245 ELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       245 eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ++...+..-     ....+.+-.+.+.+++..|++.|+++.|.+..+
T Consensus       221 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L  267 (283)
T d1mqba_         221 EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL  267 (283)
T ss_dssp             HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             HHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHH
Confidence            444444331     122334444555566788999999999987655

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=296.96  Aligned_cols=239  Identities=18%  Similarity=0.193  Sum_probs=177.8

Q ss_pred             ccceeeeee-ecccCCeEEEEEEECCC--CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           24 MLHYSFGRM-LGRGRFGVTYLCTENST--NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        24 ~~~y~~~~~-lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .++|.+.+. ||+|+||.||+|.++.+  +..||||++.....   ......+.+|+.+|+.+ +|||||++++++.. +
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~   81 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---KADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-E   81 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-S
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC---HHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-C
Confidence            457888885 99999999999987643  55799999975432   34456789999999999 69999999999875 4


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKA  158 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEE
T ss_pred             eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee---ccCCceeeccchhhhc
Confidence            689999999999999998654 569999999999999999999999999999999999999   6778999999999987


Q ss_pred             ccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHH
Q 042392          180 FEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRA  248 (436)
Q Consensus       180 ~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~  248 (436)
                      +......           ...|||++.+ ..|+.++|+||+|+++ .+.++.             ...+-...+..++..
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwS~Gv~l-~E~lt~-------------G~~Pf~~~~~~~~~~  223 (285)
T d1u59a_         159 LGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTM-WEALSY-------------GQKPYKKMKGPEVMA  223 (285)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHH-HHHHTT-------------SCCTTTTCCTHHHHH
T ss_pred             ccccccccccccccccCccccChHHHhC-CCCCccchhhcchHHH-HHHHhC-------------CCCCCCCCCHHHHHH
Confidence            6542211           1228998865 5789999999995554 332210             001111122233433


Q ss_pred             HHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          249 GLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       249 ~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      .+..     .....+.+-.+.+.+++..|++.|.++.+....
T Consensus       224 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~  265 (285)
T d1u59a_         224 FIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR  265 (285)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3332     122334444455556678899999999887654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.1e-39  Score=301.83  Aligned_cols=254  Identities=22%  Similarity=0.222  Sum_probs=190.6

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++++.||+|+||+||+|+++ +|+.||||++......  ......+.+|+.+|+.+ +|||||++++++...+..|
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   76 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED--EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLV   76 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcC--hHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCcee
Confidence            368999999999999999999985 7899999999765432  23356788999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      ++|||+.++.+..+....+.+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||.|......
T Consensus        77 i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             EEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC-
T ss_pred             EEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccC
Confidence            999999887666666667789999999999999999999999999999999999999   77899999999999876543


Q ss_pred             CC--------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHh---cC---ChhhHHHHHHHhhhhCCCCC-CccCHHHHHH
Q 042392          184 GG--------EASDDTSVILRMKQFRRMSKLKKLTVKVIVE---YL---PGEETQALKEKFIEMDTDKN-GTLSYDELRA  248 (436)
Q Consensus       184 ~~--------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~---~l---~~e~~~~l~~~F~~~D~~~~-g~i~~~eL~~  248 (436)
                      ..        ....+||.+.+...++.++|+||+|++++.-   ..   +....+.+..++........ ......++..
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (286)
T d1ob3a_         154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK  233 (286)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhh
Confidence            21        1223999998877889999999996654322   11   22344455555544433221 1111111111


Q ss_pred             HH-----------HhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          249 GL-----------TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       249 ~l-----------~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      ..           .......+..-.+-+-+++..|++.|++..|.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00           0112234445456666778889999999988874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=294.43  Aligned_cols=258  Identities=18%  Similarity=0.189  Sum_probs=195.6

Q ss_pred             ccccccccccccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC
Q 042392           10 RQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS   84 (436)
Q Consensus        10 ~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   84 (436)
                      ..+.|. ...|+...++|++.+.||+|+||.||+|++.     .+++.||||++.....   ......+.+|+.+++.+.
T Consensus         9 ~~~~~~-~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~E~~~~~~l~   84 (311)
T d1t46a_           9 PTQLPY-DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLG   84 (311)
T ss_dssp             TTTSCC-CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHC
T ss_pred             cccCCC-cccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC---HHHHHHHHHHHHHHHhcc
Confidence            344444 2367777899999999999999999999863     4677999999976542   334567889999999997


Q ss_pred             CCCCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHc
Q 042392           85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG------------------YYSERDAAPVLRAIVNAVNVCHSM  146 (436)
Q Consensus        85 ~h~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~qi~~~l~~lH~~  146 (436)
                      +|||||++++++.....+|+|||||++|+|.+++....                  .+++..+..++.||+.||.|||++
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~  164 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            79999999999999999999999999999999997643                  488999999999999999999999


Q ss_pred             CcccccCCCCcceeeccCCCCcEEEEecCCcccccccCCCC----------CCChHHHHHHHHHHHhhhhhhHHHHHHHh
Q 042392          147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA----------SDDTSVILRMKQFRRMSKLKKLTVKVIVE  216 (436)
Q Consensus       147 ~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~----------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~  216 (436)
                      +|+||||||+||++   +..+.+|++|||+|+.........          ..|||.+.+ ..|+.++|+||+|++++ +
T Consensus       165 ~ivHrDLKp~NIl~---~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~-e  239 (311)
T d1t46a_         165 NCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLW-E  239 (311)
T ss_dssp             TCCCSCCSGGGEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-H
T ss_pred             Ceeecccccccccc---cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcC-CCCCCcccccchHHHHH-H
Confidence            99999999999999   678899999999998765432211          127888865 57899999999965543 3


Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .++            .-.....+.-..+++...+.. .    ....+.+-.+.+.+++..|++.|+++.+.+..+..
T Consensus       240 llt------------~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         240 LFS------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHT------------TTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHh------------CCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            221            111111222223444444433 1    12334444456666778899999999998876543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-38  Score=292.53  Aligned_cols=245  Identities=19%  Similarity=0.192  Sum_probs=175.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTN---MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAH   96 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   96 (436)
                      |+...++|++.+.||+|+||.||+|++..++   ..||||.+.....   ......+.+|+.+|+.+ +|||||++++++
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~   77 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMRQF-DHPHIVKLIGVI   77 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC---HHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            5667789999999999999999999987553   5688888754332   34456789999999999 699999999998


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           97 EDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                      . .+.+|+|||||++|+|.+++... +.+++..++.++.||+.||.|||+++|+||||||+||++   +.++.+||+|||
T Consensus        78 ~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG  153 (273)
T d1mp8a_          78 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFG  153 (273)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC--
T ss_pred             e-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccch
Confidence            6 46789999999999999987764 468999999999999999999999999999999999999   677899999999


Q ss_pred             CcccccccCCC---------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHH
Q 042392          176 SALLFEEEGGE---------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDEL  246 (436)
Q Consensus       176 ~a~~~~~~~~~---------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL  246 (436)
                      +|+........         ...|||++.+ ..|+.++|+||+|++++ +.++.             ...+-...+..++
T Consensus       154 ~a~~~~~~~~~~~~~~~gt~~y~apE~l~~-~~~~~~~DiwSlGvil~-e~lt~-------------g~~P~~~~~~~~~  218 (273)
T d1mp8a_         154 LSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMW-EILMH-------------GVKPFQGVKNNDV  218 (273)
T ss_dssp             -----------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHH-HHHTT-------------SCCTTTTCCGGGH
T ss_pred             hheeccCCcceeccceecCcccchhhHhcc-CCCCCccccccchHHHH-HHHhc-------------CCCCCCCCCHHHH
Confidence            99876532211         1228888865 57889999999965543 32210             0011111122222


Q ss_pred             HHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          247 RAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       247 ~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...+..     .....+.+-.+.+-+++..|++.|+++.|.+..+.
T Consensus       219 ~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~  264 (273)
T d1mp8a_         219 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS  264 (273)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            222221     12234444455566677889999999999887654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-39  Score=290.95  Aligned_cols=242  Identities=15%  Similarity=0.175  Sum_probs=177.8

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-   98 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-   98 (436)
                      |+.-.++|++++.||+|+||.||+|++  +|..||||+++...      ..+.+.+|+.+++.+ +||||+++++++.. 
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~------~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~   72 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA------TAQAFLAEASVMTQL-RHSNLVQLLGVIVEE   72 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--------HHHHHTHHHHTTC-CCTTBCCEEEEECCC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH------HHHHHHHHHHHHHhC-CCCCEeeEEEEEEec
Confidence            566778999999999999999999997  47789999996542      235688999999999 69999999998854 


Q ss_pred             CCeEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392           99 ETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                      .+.+|+|||||++|+|.+++...+  .+++..++.++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||+
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~  149 (262)
T d1byga_          73 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGL  149 (262)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC
T ss_pred             CCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeeccccc
Confidence            567899999999999999997653  48999999999999999999999999999999999999   7889999999999


Q ss_pred             cccccccCCC-----CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH
Q 042392          177 ALLFEEEGGE-----ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT  251 (436)
Q Consensus       177 a~~~~~~~~~-----~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~  251 (436)
                      ++........     ...|||.+.+ ..|+.++||||+|+++ .+.++.             ...+....+..++...+.
T Consensus       150 s~~~~~~~~~~~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il-~el~t~-------------~~~p~~~~~~~~~~~~i~  214 (262)
T d1byga_         150 TKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL-WEIYSF-------------GRVPYPRIPLKDVVPRVE  214 (262)
T ss_dssp             ------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHH-HHHHTT-------------SCCSCTTSCGGGHHHHHT
T ss_pred             ceecCCCCccccccccCCChHHHhC-CCCChHHHHHhHHHHH-HHHHHC-------------CCCCCCCCCHHHHHHHHH
Confidence            9876543322     2239998876 4789999999995544 333211             111122223333333332


Q ss_pred             h-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          252 K-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       252 ~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .     +....+.+-.+.+-++++.|++.|+++.|.+..+..
T Consensus       215 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         215 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            2     122233333444555678899999999998876543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-38  Score=301.26  Aligned_cols=254  Identities=20%  Similarity=0.247  Sum_probs=186.2

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++.+....  ......+.+|+.+|+.+ +|||||+++++|...+  
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~   92 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS--ELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL   92 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS--HHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcC--hHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccc
Confidence            788999999999999999999999999999999999765432  34556789999999999 6999999999997654  


Q ss_pred             ----eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCC
Q 042392          101 ----AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGS  176 (436)
Q Consensus       101 ----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~  176 (436)
                          .+|+||||| +.+|..++. .+++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+|++|||+
T Consensus        93 ~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          93 DDFTDFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL  167 (346)
T ss_dssp             TTCCCCEEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             cccceEEEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccccccc
Confidence                579999999 557766654 5679999999999999999999999999999999999999   7889999999999


Q ss_pred             cccccccCCCCC-----CChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc---c
Q 042392          177 ALLFEEEGGEAS-----DDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT---L  241 (436)
Q Consensus       177 a~~~~~~~~~~~-----~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~---i  241 (436)
                      |+..........     .|||++.+...++.++|+||+|+++ .+.+       +......+..+.......+...   .
T Consensus       168 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil-~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (346)
T d1cm8a_         168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM-AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL  246 (346)
T ss_dssp             CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH-HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred             eeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHH-HHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhh
Confidence            998765433221     2999998877889999999996554 3332       2334444444444433332110   1


Q ss_pred             CHHHHHHHHHhc-----------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          242 SYDELRAGLTKV-----------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       242 ~~~eL~~~l~~~-----------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ...........+           ....+..-.+.+-+++..|++.|++..|.+.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         247 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            111111122111           12345555666777888899999999888764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-39  Score=296.57  Aligned_cols=254  Identities=21%  Similarity=0.248  Sum_probs=190.0

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeEE
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVH  103 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~  103 (436)
                      +++|++++.||+|+||+||+|++..+++.||||+++.....  ......+.+|+.+|+.+ +||||+++++++.....++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~   77 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS--TTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCC--hHHHHHHHHHHHHHHhc-CcCCEEeecccccccccee
Confidence            46899999999999999999999999999999999765432  34567889999999999 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccccc
Q 042392          104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE  183 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  183 (436)
                      +|++++.+++|..++...+.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||.|+.....
T Consensus        78 iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSC
T ss_pred             EEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCC
Confidence            999999999998888888889999999999999999999999999999999999999   67789999999999887543


Q ss_pred             CCCCC--------CChHHHHHHHHHHHhhhhhhHHHHHHHhcCC--------hhhHHHHHHHhhhhCCCCCCccCH-HHH
Q 042392          184 GGEAS--------DDTSVILRMKQFRRMSKLKKLTVKVIVEYLP--------GEETQALKEKFIEMDTDKNGTLSY-DEL  246 (436)
Q Consensus       184 ~~~~~--------~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~--------~e~~~~l~~~F~~~D~~~~g~i~~-~eL  246 (436)
                      .....        .+||++.+...++.++|+||+|+ ++.+.+.        ....+.+..+.............. ..+
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~-il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC-IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHH-HHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             CccceeeccccchhhhhHhccCCCCCchhhccccch-HHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhc
Confidence            32211        17787777666889999999954 4444431        122333444443333222111000 000


Q ss_pred             H-----------HHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          247 R-----------AGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       247 ~-----------~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .           ..........+..-.+.+-+++..|+..|++.+|.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0           0000111233444455566667788888888887664

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-38  Score=291.23  Aligned_cols=251  Identities=17%  Similarity=0.201  Sum_probs=184.9

Q ss_pred             ccccccccccccceeeeeeecccCCeEEEEEEECCCC-------ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC
Q 042392           14 PILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTN-------MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ   86 (436)
Q Consensus        14 p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h   86 (436)
                      |..++ |+...++|.+++.||+|+||.||+|++..++       ..||||++.....   ......+.+|...+..+.+|
T Consensus         3 ~~~~~-~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~e~~~l~~~~~H   78 (299)
T d1fgka_           3 PEDPR-WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKH   78 (299)
T ss_dssp             CCCTT-TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred             CcCCc-CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC---hHHHHHHHHHHHHHHHhcCC
Confidence            44333 7778899999999999999999999986554       3799999876543   23456788899999888679


Q ss_pred             CCeeeceeeeecCCeEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----------------YYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        87 ~niv~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      ||||++++++.+++.+|+|||||++|+|.+++....                .+++..++.++.||+.||.|||+++|+|
T Consensus        79 pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivH  158 (299)
T d1fgka_          79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH  158 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEe
Confidence            999999999999999999999999999999997542                4899999999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCCCC----------CCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA----------SDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG  220 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~----------~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~  220 (436)
                      |||||+|||+   +.++.+||+|||+++.........          ..|||.+.+ +.|+.++|+||+|+++. +.++.
T Consensus       159 rDiKp~NiLl---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~-ell~~  233 (299)
T d1fgka_         159 RDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLW-EIFTL  233 (299)
T ss_dssp             SCCSGGGEEE---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT
T ss_pred             eeecccceee---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC-CCCCchhhhHHhHHHHH-HhccC
Confidence            9999999999   788899999999999876543221          128888876 57999999999966543 22210


Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                                   ...+-...+..++...+..     .....+.+-.+.+-+++..|++.|++..|.+..+
T Consensus       234 -------------g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L  291 (299)
T d1fgka_         234 -------------GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  291 (299)
T ss_dssp             -------------SCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             -------------CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence                         0011111222333333222     1123344444555566788899999999988765

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.3e-38  Score=292.84  Aligned_cols=245  Identities=15%  Similarity=0.118  Sum_probs=187.1

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEEC-----CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeecee
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTEN-----STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKS   94 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~   94 (436)
                      ++...++|++++.||+|+||.||+|+++     .+++.||||++.....   ......+.+|+.+|+.+ +||||+++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~E~~il~~l-~h~niv~~~~   83 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEF-DNPNIVKLLG   83 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC---hHHHHHHHHHHHHHHhc-CCCCccccee
Confidence            5666789999999999999999999975     3567899999875432   34456789999999999 6999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHcC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 042392           95 AHEDETAVHVVMELCQGGDLFDRIIAKG------------------------YYSERDAAPVLRAIVNAVNVCHSMGVMH  150 (436)
Q Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~------------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H  150 (436)
                      ++...+..++||||+++|+|.+++....                        .+++..+..++.|++.||.|||+++|+|
T Consensus        84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivH  163 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  163 (301)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEe
Confidence            9999999999999999999999997532                        3788899999999999999999999999


Q ss_pred             ccCCCCcceeeccCCCCcEEEEecCCcccccccCCC----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCh
Q 042392          151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGE----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG  220 (436)
Q Consensus       151 rdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~  220 (436)
                      |||||+|||+   +.++.+||+|||+|+.+.+....          ...|||.+.+ ..|+.++|+||+|++++ +.+..
T Consensus       164 rDlKp~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~-ell~~  238 (301)
T d1lufa_         164 RDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLW-EIFSY  238 (301)
T ss_dssp             SCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTT
T ss_pred             eEEcccceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHH-HHHcc
Confidence            9999999999   77889999999999876443211          1127888776 57899999999965543 32210


Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                                   ...+....+..++...+..-     ....+.+-.+.+.+++..+++.|+++.|....+
T Consensus       239 -------------~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L  296 (301)
T d1lufa_         239 -------------GLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL  296 (301)
T ss_dssp             -------------TCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             -------------CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence                         01122223444444443321     123344444556667788888899998876544

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-38  Score=293.78  Aligned_cols=241  Identities=16%  Similarity=0.162  Sum_probs=182.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCce--EEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNMP--YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ++|++.++||+|+||.||+|+++.+|..  ||||.+.....   ......+.+|+.+|+.+.+|||||++++++...+.+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~   86 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL   86 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC---hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence            6899999999999999999999888764  67777654322   223456899999999985699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC
Q 042392          103 HVVMELCQGGDLFDRIIAK----------------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN  166 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~  166 (436)
                      |+|||||++|+|.+++...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.+
T Consensus        87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~  163 (309)
T d1fvra_          87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GEN  163 (309)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGG
T ss_pred             EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCC
Confidence            9999999999999999753                458999999999999999999999999999999999999   777


Q ss_pred             CcEEEEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCC
Q 042392          167 ALLKVTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNG  239 (436)
Q Consensus       167 ~~~kl~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g  239 (436)
                      +.+||+|||+|+.......       ....+||.+.+ ..|+.++|+||+|+.++ +.+.            ....+. .
T Consensus       164 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~-ell~------------~~~~p~-~  228 (309)
T d1fvra_         164 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLW-EIVS------------LGGTPY-C  228 (309)
T ss_dssp             GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHH-HHHT------------TSCCTT-T
T ss_pred             CceEEccccccccccccccccceecCCcccchHHhcc-CCCCccceeehhHHHHH-HHHh------------cCCCCC-C
Confidence            8999999999987654322       12238998876 57889999999955543 3221            001111 1


Q ss_pred             ccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          240 TLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       240 ~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..+..++...+..     .....+.+-.+.+-+++..|++.|+++.|.+..+
T Consensus       229 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L  280 (309)
T d1fvra_         229 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  280 (309)
T ss_dssp             TCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            2334444443332     1123344444555667788999999999998764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-38  Score=298.95  Aligned_cols=243  Identities=21%  Similarity=0.266  Sum_probs=180.3

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-----
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-----   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-----   98 (436)
                      ..+|+.+++||+|+||+||+|+++.+|+.||||++......        ..+|+.+|+.+ +||||++++++|..     
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~   89 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------KNRELQIMRKL-DHCNIVRLRYFFYSSGEKK   89 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS--------CCHHHHHHHHC-CCTTBCCEEEEEEEC--CC
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH--------HHHHHHHHHhc-CCCCCCcEEEEEEecCccC
Confidence            34799999999999999999999999999999999765422        34799999999 69999999999854     


Q ss_pred             -CCeEEEEEeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCC-CcEEEE
Q 042392           99 -ETAVHVVMELCQGGDLFDRII----AKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN-ALLKVT  172 (436)
Q Consensus        99 -~~~~~iv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~-~~~kl~  172 (436)
                       ..++|+|||||+++ +...+.    ....+++..++.++.||+.||.|||++||+||||||+|||+   +.+ ..+||+
T Consensus        90 ~~~~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl---~~~~~~~kl~  165 (350)
T d1q5ka_          90 DEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLC  165 (350)
T ss_dssp             SCCEEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTTCCEEEC
T ss_pred             CceEEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE---ecCCCceeEe
Confidence             34589999999874 444433    34569999999999999999999999999999999999999   544 489999


Q ss_pred             ecCCcccccccCCC-------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC
Q 042392          173 DFGSALLFEEEGGE-------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN  238 (436)
Q Consensus       173 DFG~a~~~~~~~~~-------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~  238 (436)
                      |||+|+........       ...+||++.+...|+.++|+||+|+. +.+.+       .......+..++..+..+. 
T Consensus       166 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~i-l~el~~g~~pf~~~~~~~~l~~i~~~~g~~~-  243 (350)
T d1q5ka_         166 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV-LAELLLGQPIFPGDSGVDQLVEIIKVLGTPT-  243 (350)
T ss_dssp             CCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH-HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC-
T ss_pred             cccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceE-EEehhhCCCCCCCCCHHHHHHHHHHHhCCCh-
Confidence            99999876543222       22399999877789999999999554 44432       2334455555555443321 


Q ss_pred             CccCHHHHHHHHHh-----------------cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          239 GTLSYDELRAGLTK-----------------VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 g~i~~~eL~~~l~~-----------------~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                          .+.+......                 .....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       244 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         244 ----REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             ----HHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----HHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                2222221110                 112345555566667788888889998887754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-38  Score=293.64  Aligned_cols=239  Identities=19%  Similarity=0.204  Sum_probs=176.5

Q ss_pred             cceeeeeeecccCCeEEEEEEECCCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENSTNM----PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET  100 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~  100 (436)
                      .+|+++++||+|+||+||+|++..+|+    +||+|.+.....   ......+.+|+.+++.+ +|||||++++++.++ 
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASV-DNPHVCRLLGICLTS-   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccC---HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-
Confidence            469999999999999999999988876    577777754322   23456789999999999 699999999999865 


Q ss_pred             eEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..++++||+.+|+|.+++... ..+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.
T Consensus        84 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~  160 (317)
T d1xkka_          84 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL  160 (317)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHH
T ss_pred             CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeecccccee
Confidence            577888999999999988775 469999999999999999999999999999999999999   6778999999999987


Q ss_pred             ccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          180 FEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       180 ~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......          ....|||.+.+ ..|+.++|+||+|+.+ .+.++.             ...+-...+..++...
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDvwS~Gvil-~el~t~-------------g~~p~~~~~~~~~~~~  225 (317)
T d1xkka_         161 LGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTV-WELMTF-------------GSKPYDGIPASEISSI  225 (317)
T ss_dssp             TTTTCC--------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHH-HHHHTT-------------SCCTTTTSCGGGHHHH
T ss_pred             cccccccccccccccCccccChHHHhc-CCCChhhhhhhHHHHH-HHHHHC-------------CCCCCCCCCHHHHHHH
Confidence            644221          12239998876 4789999999995554 333210             1111111233334443


Q ss_pred             HHh-c----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          250 LTK-V----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       250 l~~-~----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +.. .    ....+.+-.+.+.+++..|++.|+++.|.+..+
T Consensus       226 i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         226 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence            332 1    112333334455567788999999999988664

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.5e-38  Score=294.74  Aligned_cols=179  Identities=24%  Similarity=0.379  Sum_probs=152.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec--CC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED--ET  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--~~  100 (436)
                      ..++|++++.||+|+||+||+|+++.+|+.||||++....       ...+.+|+.+|+.+.+||||++++++|..  ..
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~  105 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-------KKKIKREIKILENLRGGPNIITLADIVKDPVSR  105 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCC
Confidence            3468999999999999999999999999999999986432       34678999999999679999999999974  35


Q ss_pred             eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          101 AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      .+|+|||||++++|..+.   +.+++..++.++.||+.||.|||++||+||||||+|||+.  ..++.+||+|||+|+..
T Consensus       106 ~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~--~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         106 TPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             SEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCGGGCEEC
T ss_pred             ceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc--CCCCeeeecccccceec
Confidence            699999999999997653   4699999999999999999999999999999999999994  23457999999999877


Q ss_pred             cccCCCC-------CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          181 EEEGGEA-------SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       181 ~~~~~~~-------~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      .......       ..|||.+.+...|+.++|+||+|+.+
T Consensus       181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l  220 (328)
T d3bqca1         181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML  220 (328)
T ss_dssp             CTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             cCCCcccccccCccccCcccccCCCCCCcccchhhhhhhh
Confidence            5432221       22999998877789999999995554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-38  Score=286.62  Aligned_cols=241  Identities=17%  Similarity=0.192  Sum_probs=171.4

Q ss_pred             cceeeeeeecccCCeEEEEEEECCC-C--ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCe
Q 042392           25 LHYSFGRMLGRGRFGVTYLCTENST-N--MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETA  101 (436)
Q Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~  101 (436)
                      ++|++.+.||+|+||.||+|++..+ +  ..||||++.+..... ......+.+|+.+|+.+ +||||+++++++.+ ..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~-~~   84 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT-PP   84 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCC-HHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee-cc
Confidence            5799999999999999999986533 3  478999987654433 34456789999999999 69999999999976 46


Q ss_pred             EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccc
Q 042392          102 VHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF  180 (436)
Q Consensus       102 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~  180 (436)
                      +++|||||++|++.+++... +.+++..++.++.||+.||.|||+++|+||||||+||++   +.++.+||+|||+|+.+
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll---~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEEC
T ss_pred             hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc---ccccceeeccchhhhhc
Confidence            78999999999999887764 469999999999999999999999999999999999999   56789999999999987


Q ss_pred             cccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          181 EEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       181 ~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      ......           ...|||.+.+ ..|+.++|+||+|++++ +.++             .+..+-...+..++...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~-emlt-------------~G~~Pf~~~~~~~~~~~  226 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLW-EMFT-------------YGQEPWIGLNGSQILHK  226 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHH-HHHT-------------TSCCTTTTCCHHHHHHH
T ss_pred             ccCCCcceecCccccCcccCCHHHHhC-CCCCcchhhhhhHHHHH-HHHh-------------CCCCCCCCcCHHHHHHH
Confidence            443221           1227888876 67899999999966553 2221             01111112333444333


Q ss_pred             HHhcC------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          250 LTKVG------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       250 l~~~~------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      +..-+      ...+.+-.+.+.+++..|++.|+++.|....+
T Consensus       227 i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L  269 (273)
T d1u46a_         227 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL  269 (273)
T ss_dssp             HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            33222      12333333445556788999999999876544

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-38  Score=296.44  Aligned_cols=255  Identities=18%  Similarity=0.199  Sum_probs=179.4

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-----
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-----   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-----   98 (436)
                      .++|++++.||+|+||+||+|+++.+|+.||||++......  ......+.+|+.+|+.+ +||||+++++++..     
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~   85 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLL-KHENVVNLIEICRTKASPY   85 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT--TSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-----
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccc
Confidence            58999999999999999999999999999999998665432  23345678999999999 69999999998754     


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecC
Q 042392           99 ---ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG  175 (436)
Q Consensus        99 ---~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG  175 (436)
                         .+.+|+|||||.++.+.........+++..++.+++||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg  162 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFG  162 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCT
T ss_pred             cccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecc
Confidence               35689999999886655554445679999999999999999999999999999999999999   778899999999


Q ss_pred             CcccccccCC------------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCC-
Q 042392          176 SALLFEEEGG------------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDT-  235 (436)
Q Consensus       176 ~a~~~~~~~~------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~-  235 (436)
                      +|+.+.....            ....|||++.+...|+.++|+||+|+.+ .+.+       +......+..+...+.. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil-~el~~g~~pf~~~~~~~~~~~i~~~~~~~  241 (318)
T d3blha1         163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIMQGNTEQHQLALISQLCGSI  241 (318)
T ss_dssp             TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCcee-eeHhhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9986653211            1112999998877899999999996554 3332       22233333333332222 


Q ss_pred             --CCCCccCHHHHHHHHHhcC-CC-----------CCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          236 --DKNGTLSYDELRAGLTKVG-SM-----------LTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       236 --~~~g~i~~~eL~~~l~~~~-~~-----------~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                        ..........+...+.... ..           .+...++.+-+++..|++.|++.+|.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence              1111111111111111111 00           13333455667788889999999988765

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-38  Score=294.83  Aligned_cols=248  Identities=21%  Similarity=0.305  Sum_probs=185.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEEC---CCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTEN---STNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   99 (436)
                      -.++|++++.||+|+||+||+|++.   .+|+.||||++.+............+.+|+.+|+++.+||||+++++++.+.
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            4588999999999999999999974   4789999999876543222223445789999999996458999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      ..+|+||||+.+|+|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.
T Consensus       102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEE
T ss_pred             CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999   7788999999999987


Q ss_pred             ccccCC---------CCCCChHHHHHHH-HHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHH
Q 042392          180 FEEEGG---------EASDDTSVILRMK-QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG  249 (436)
Q Consensus       180 ~~~~~~---------~~~~~pe~~~~~~-~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~  249 (436)
                      +.....         ....+||.+.+.. .|+.++||||+|++++.-..+..       .|.   .. +..-....+...
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~-------PF~---~~-~~~~~~~~i~~~  247 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS-------PFT---VD-GEKNSQAEISRR  247 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC-------TTS---CT-TSCCCHHHHHHH
T ss_pred             hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC-------CCC---CC-CHHHHHHHHHHh
Confidence            643221         1223888887543 56789999999555432221111       111   11 111233334333


Q ss_pred             HHhc----CCCCCHHHHHHHHHHHcCCCCCccc-----HHHHHH
Q 042392          250 LTKV----GSMLTEFDVKQLMEAADMDGNGAID-----YTEFTA  284 (436)
Q Consensus       250 l~~~----~~~~s~~~i~~l~~~~d~d~~g~i~-----~~EF~~  284 (436)
                      ....    ....+.+-.+.+-++++.|++.|++     .+|.+.
T Consensus       248 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         248 ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             cccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            3221    2345555566666778888888885     566653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-38  Score=297.08  Aligned_cols=252  Identities=19%  Similarity=0.237  Sum_probs=179.9

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      +..+|++++.||+|+||+||+|+++.+|+.||||++.+...   ......+.+|+.+|+.| +||||+++++++....  
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH---QTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC---HHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTT
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC---hHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeecccc
Confidence            55789999999999999999999999999999999975432   34456788999999999 6999999999986543  


Q ss_pred             ---eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          101 ---AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       101 ---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                         .+|+++ |+.+|+|.+++... ++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus        82 ~~~~~~l~~-~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a  156 (345)
T d1pmea_          82 QMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA  156 (345)
T ss_dssp             TCCCEEEEE-ECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             ccceEEEEE-eecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCce
Confidence               355554 55688999999764 69999999999999999999999999999999999999   77889999999999


Q ss_pred             ccccccCCC-----------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCC-
Q 042392          178 LLFEEEGGE-----------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKN-  238 (436)
Q Consensus       178 ~~~~~~~~~-----------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~-  238 (436)
                      .........           ...|||++.....|+.++|+||+|+.++ +.+       +.+...........+..... 
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~-eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA-EMLSNRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHH-HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceeh-HHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence            876443211           1128998877677889999999965543 332       11222222222222111110 


Q ss_pred             ---CccCHHHHHHHHH-----------hcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          239 ---GTLSYDELRAGLT-----------KVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       239 ---g~i~~~eL~~~l~-----------~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                         ...... ......           ......+.+-.+.+.+++..|+..|++.+|.+.+
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         236 DLNCIINLK-ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHTCCCHH-HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhh-hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               001111 111111           1122445556677777888899999998888753

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-37  Score=285.99  Aligned_cols=250  Identities=16%  Similarity=0.158  Sum_probs=190.8

Q ss_pred             cccccccccceeeeeeecccCCeEEEEEEECC-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeee
Q 042392           17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENS-----TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE   91 (436)
Q Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   91 (436)
                      +..|+...++|++.+.||+|+||.||+|.++.     ++..||||++.....   ......+.+|+.+++.+ +||||++
T Consensus        12 ~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~   87 (308)
T d1p4oa_          12 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS---MRERIEFLNEASVMKEF-NCHHVVR   87 (308)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC---HHHHHHHHHHHHHGGGC-CCTTBCC
T ss_pred             ccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC---hHHHHHHHHHHHHHHHc-CCCCEee
Confidence            45788888999999999999999999998853     357899999875432   23455789999999999 6999999


Q ss_pred             ceeeeecCCeEEEEEeccCCCChHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceee
Q 042392           92 LKSAHEDETAVHVVMELCQGGDLFDRIIAK----------GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFI  161 (436)
Q Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~  161 (436)
                      +++++......++|||||++|+|.+++...          ..++...+..++.|++.||.|||+++|+||||||+|||+ 
T Consensus        88 ~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl-  166 (308)
T d1p4oa_          88 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV-  166 (308)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE-
T ss_pred             eeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee-
Confidence            999999999999999999999999998753          236889999999999999999999999999999999999 


Q ss_pred             ccCCCCcEEEEecCCcccccccCC----------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhh
Q 042392          162 SRDDNALLKVTDFGSALLFEEEGG----------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFI  231 (436)
Q Consensus       162 ~~~~~~~~kl~DFG~a~~~~~~~~----------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~  231 (436)
                        +.++.+||+|||+|+.+.....          ....+||.+.+ ..|+.++|+||+|+.+ .+.+            .
T Consensus       167 --d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il-~El~------------t  230 (308)
T d1p4oa_         167 --AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVL-WEIA------------T  230 (308)
T ss_dssp             --CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHH-HHHH------------H
T ss_pred             --cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc-CCCCcccccccHHHHH-HHHH------------h
Confidence              7889999999999987654321          11228888876 5688899999995554 3322            1


Q ss_pred             hhCCCCCCccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          232 EMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       232 ~~D~~~~g~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ... .+-...+..++...+.+-     ....+..-.+.+.+++..|++.|.++.+.+..+..
T Consensus       231 ~~~-~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~  291 (308)
T d1p4oa_         231 LAE-QPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  291 (308)
T ss_dssp             TSC-CTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred             CCC-CCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            101 111223444443333321     12334444555666788899999999998876543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-38  Score=291.38  Aligned_cols=255  Identities=16%  Similarity=0.195  Sum_probs=179.5

Q ss_pred             ccceeeeeeecccCCeEEEEEEECCC-CceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC--CCCCeeeceeeeec--
Q 042392           24 MLHYSFGRMLGRGRFGVTYLCTENST-NMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPNIVELKSAHED--   98 (436)
Q Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~--   98 (436)
                      .++|++++.||+|+||+||+|++..+ ++.||||++.......  .....+.+|+.+|+.|+  +||||+++++++..  
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc--hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence            46899999999999999999999766 6679999987643322  11234567888877663  69999999999853  


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEec
Q 042392           99 ---ETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDF  174 (436)
Q Consensus        99 ---~~~~~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DF  174 (436)
                         ...+|++||||+++.+...... ...+++..++.++.|++.||.|||+++|+||||||+|||+   +..+.+||+||
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~df  160 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADF  160 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSC
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecch
Confidence               3568999999988665444333 3458999999999999999999999999999999999999   77889999999


Q ss_pred             CCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCCc
Q 042392          175 GSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNGT  240 (436)
Q Consensus       175 G~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g~  240 (436)
                      |+++.......       ....|||++.+ ..|+.++|+||+|+.+ .+.+       +......+..+...+..+....
T Consensus       161 g~~~~~~~~~~~~~~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il-~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  238 (305)
T d1blxa_         161 GLARIYSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIF-AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  238 (305)
T ss_dssp             CSCCCCCGGGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             hhhhhhcccccCCCcccChhhcCcchhcC-CCCChhehhhchHHHH-HHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhc
Confidence            99987644322       12239999877 5789999999995544 3433       2234445555544433222110


Q ss_pred             cC------HHHH----HHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          241 LS------YDEL----RAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       241 i~------~~eL----~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..      ...+    ......+...++..-.+.+-+++..|++.|++..|.+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            00      0000    000111223445555566667788889999998887643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-37  Score=291.12  Aligned_cols=255  Identities=18%  Similarity=0.228  Sum_probs=184.5

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecC---
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDE---   99 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~---   99 (436)
                      +.++|++++.||+|+||+||+|++..+|+.||||++.+....  ......+.+|+.+|+.+ +|||||++++++...   
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~   92 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL   92 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSS--HHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSST
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcC--hHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeecccc
Confidence            568999999999999999999999999999999999765433  24456788999999999 699999999998643   


Q ss_pred             --CeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCc
Q 042392          100 --TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA  177 (436)
Q Consensus       100 --~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a  177 (436)
                        ...+++|+|+.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+|++|||+|
T Consensus        93 ~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          93 EEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA  168 (348)
T ss_dssp             TTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC---
T ss_pred             ccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccchh
Confidence              234566677778999998854 569999999999999999999999999999999999999   78899999999999


Q ss_pred             ccccccCCCCC-----CChHHHHHHHHHHHhhhhhhHHHHHHHhcC-------ChhhHHHHHHHhhhhCCCCCC---ccC
Q 042392          178 LLFEEEGGEAS-----DDTSVILRMKQFRRMSKLKKLTVKVIVEYL-------PGEETQALKEKFIEMDTDKNG---TLS  242 (436)
Q Consensus       178 ~~~~~~~~~~~-----~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l-------~~e~~~~l~~~F~~~D~~~~g---~i~  242 (436)
                      ...........     .+||++.+...++.++|+||+|++++ +.+       +.........+..........   ...
T Consensus       169 ~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~-~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (348)
T d2gfsa1         169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA-ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  247 (348)
T ss_dssp             -CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHH-HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCC
T ss_pred             cccCcccccccccccccCchhhcCCccCCcccchhhhhHHHH-HHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhcc
Confidence            87655433322     28999888777889999999965543 332       223333444444333222110   011


Q ss_pred             HHHHHHHHHhc-----------CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          243 YDELRAGLTKV-----------GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       243 ~~eL~~~l~~~-----------~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      ..........+           ....+.+-.+.+-+++..|+..|++..|.+.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             chhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence            11111111111           12345555666777788888889988887753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-36  Score=277.73  Aligned_cols=237  Identities=18%  Similarity=0.201  Sum_probs=173.5

Q ss_pred             eeeeeecccCCeEEEEEEECCCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeec-CCeEE
Q 042392           28 SFGRMLGRGRFGVTYLCTENSTN---MPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHED-ETAVH  103 (436)
Q Consensus        28 ~~~~~lg~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-~~~~~  103 (436)
                      .+.++||+|+||+||+|++..++   ..||||++.....   ......+.+|+.+|+++ +||||+++++++.. ++.++
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~  105 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---IGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPL  105 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCC---HHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccC---HHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceE
Confidence            34688999999999999986543   3699999864332   34557799999999999 69999999998764 56899


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCcccccc
Q 042392          104 VVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE  182 (436)
Q Consensus       104 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  182 (436)
                      +|||||++|+|.+++.... .+++..+..++.|++.||.|||+.+|+||||||+|||+   +.++.+||+|||+++....
T Consensus       106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTT
T ss_pred             EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccc
Confidence            9999999999999887654 47788899999999999999999999999999999999   7888999999999987654


Q ss_pred             cCCC------------CCCChHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHH
Q 042392          183 EGGE------------ASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGL  250 (436)
Q Consensus       183 ~~~~------------~~~~pe~~~~~~~~~~~~d~~s~~~~~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l  250 (436)
                      ....            ...+||.+.+ ..|+.++|+||+|+.++ +.++..             .+.....+..++...+
T Consensus       183 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~SfGivl~-El~t~~-------------~p~~~~~~~~~~~~~i  247 (311)
T d1r0pa_         183 KEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLW-ELMTRG-------------APPYPDVNTFDITVYL  247 (311)
T ss_dssp             TTCCCTTCTTCSSCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHH-HHHTTS-------------CCSCC------CHHHH
T ss_pred             cccccceecccccccccccChHHHhc-CCCCChhHhhhhHHHHH-HHHHCC-------------CCCCCCCCHHHHHHHH
Confidence            3211            1228888775 57899999999955543 332100             1111111222222222


Q ss_pred             Hh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          251 TK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       251 ~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ..     .....+.+-.+.+.+++..|++.|+++.|.+..+
T Consensus       248 ~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L  288 (311)
T d1r0pa_         248 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI  288 (311)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            21     1123344445556667888999999999988643

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.1e-36  Score=277.40  Aligned_cols=184  Identities=24%  Similarity=0.316  Sum_probs=150.4

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++++.||+|+||.||+|++..+|+.||||++......      ..+.+|+++++.+.+|++|+.+..++...+..
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS------CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC------HHHHHHHHHHHHccCCCcccEEEEEEecCCEE
Confidence            346899999999999999999999999999999998765432      24678999999996445566667777888999


Q ss_pred             EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEEecCCccccc
Q 042392          103 HVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE  181 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~~~  181 (436)
                      ++|||||. ++|...+.. .+.+++..+..++.|++.||.|||++||+||||||+|||+...+.+..+||+|||+|+.+.
T Consensus        79 ~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          79 VMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             EEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             EEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            99999995 477776655 4569999999999999999999999999999999999998654556789999999999875


Q ss_pred             ccCC---------------CCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          182 EEGG---------------EASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       182 ~~~~---------------~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      ....               ....|||.+.+ ..|+.++|+||+|++++
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~~l~  204 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLM  204 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTT-BCCCHHHHHHHHHHHHH
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhC-CCCCChhhEEecCHHHH
Confidence            4221               11228998876 45889999999966543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.3e-35  Score=271.99  Aligned_cols=184  Identities=24%  Similarity=0.347  Sum_probs=155.3

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      +.++|++++.||+|+||+||+|++..+|+.||||++......      ..+.+|+++++.|.+||||+.+++++......
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~   76 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN   76 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS------CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc------HHHHHHHHHHHHhcCCCCCCEEEEEeecCCcc
Confidence            457899999999999999999999999999999998654322      24678999999997679999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc--CCCCcEEEEecCCccc
Q 042392          103 HVVMELCQGGDLFDRIIAKG-YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR--DDNALLKVTDFGSALL  179 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~--~~~~~~kl~DFG~a~~  179 (436)
                      |+||||| +++|.+++...+ .++...+..++.|++.||.|||++||+||||||+|||+...  ...+.+||+|||+|+.
T Consensus        77 ~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          77 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            9999999 679999988764 59999999999999999999999999999999999999532  2357899999999987


Q ss_pred             ccccC---------------CCCCCChHHHHHHHHHHHhhhhhhHHHHHH
Q 042392          180 FEEEG---------------GEASDDTSVILRMKQFRRMSKLKKLTVKVI  214 (436)
Q Consensus       180 ~~~~~---------------~~~~~~pe~~~~~~~~~~~~d~~s~~~~~~  214 (436)
                      +....               .....|||.+.+ +.|+.++|+||+|++++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~DiwSlG~~l~  204 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFM  204 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHH
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcC-CCCChHHHHHHhhHHHH
Confidence            65321               112228998876 56899999999966553

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-36  Score=285.04  Aligned_cols=193  Identities=21%  Similarity=0.264  Sum_probs=151.8

Q ss_pred             ccccccccc-ccccccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCe
Q 042392           11 QRYPILGKP-YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI   89 (436)
Q Consensus        11 ~~~p~~~~~-~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni   89 (436)
                      ++||+.-.. .-.+.++|+++++||+|+||+||+|+++.+|+.||||++.+....  ......+.+|+.+++.+ +||||
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l-~hpnI   78 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--QTHAKRAYRELVLMKCV-NHKNI   78 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSS--HHHHHHHHHHHHHHHHC-CCTTB
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcC--HHHHHHHHHHHHHHHhc-CCCCe
Confidence            345553221 224668999999999999999999999999999999999866543  34456788999999999 69999


Q ss_pred             eeceeeeec------CCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeecc
Q 042392           90 VELKSAHED------ETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISR  163 (436)
Q Consensus        90 v~~~~~~~~------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~  163 (436)
                      ++++++|..      ...+|+|||||.+ ++.+.+  ...+++..++.+++||+.||.|||++||+||||||+|||+   
T Consensus        79 v~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---  152 (355)
T d2b1pa1          79 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---  152 (355)
T ss_dssp             CCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---
T ss_pred             eEEEEEEecccccccCceeEEEEeccch-HHHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---
Confidence            999999964      4689999999976 565555  3569999999999999999999999999999999999999   


Q ss_pred             CCCCcEEEEecCCcccccccCC-------CCCCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          164 DDNALLKVTDFGSALLFEEEGG-------EASDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       164 ~~~~~~kl~DFG~a~~~~~~~~-------~~~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +.++.+|++|||+++.......       ....|||++.+ ..|+.++|+||+|+++
T Consensus       153 ~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG~~l  208 (355)
T d2b1pa1         153 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM  208 (355)
T ss_dssp             CTTCCEEECCCCC---------------CCTTCCHHHHTT-CCCCTTHHHHHHHHHH
T ss_pred             ccccceeeechhhhhccccccccccccccccccChhhhcC-CCCCCCcccccccchH
Confidence            7788999999999887654322       22239999877 4788999999996554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=276.38  Aligned_cols=249  Identities=15%  Similarity=0.159  Sum_probs=175.0

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCC--
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDET--  100 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--  100 (436)
                      +.++|.+.+.||+|+||.||+|++  +|+.||||++....     .......+|+..++.+ +||||+++++++...+  
T Consensus         1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~   72 (303)
T d1vjya_           1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGT   72 (303)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSS
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCc
Confidence            357899999999999999999986  68999999986432     1122233455555677 6999999999987653  


Q ss_pred             --eEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------cCcccccCCCCcceeeccCCCCcEE
Q 042392          101 --AVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS--------MGVMHRDLKPENFCFISRDDNALLK  170 (436)
Q Consensus       101 --~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~--------~~i~Hrdlkp~Nill~~~~~~~~~k  170 (436)
                        .+|+|||||++|+|.+++.+. ++++.....++.|++.||.|||+        +||+||||||+|||+   +.++.+|
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~K  148 (303)
T d1vjya_          73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC  148 (303)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEE
T ss_pred             ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeE
Confidence              689999999999999999765 58999999999999999999996        599999999999999   7889999


Q ss_pred             EEecCCcccccccCC------------CCCCChHHHHHH-----HHHHHhhhhhhHHHHHHHhcCChhhH----HHHHHH
Q 042392          171 VTDFGSALLFEEEGG------------EASDDTSVILRM-----KQFRRMSKLKKLTVKVIVEYLPGEET----QALKEK  229 (436)
Q Consensus       171 l~DFG~a~~~~~~~~------------~~~~~pe~~~~~-----~~~~~~~d~~s~~~~~~~~~l~~e~~----~~l~~~  229 (436)
                      |+|||+|+.......            ....|||.+.+.     ..|+.++|+||+|+++ .+.++....    ......
T Consensus       149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl-~el~tg~~~~~~~~~~~~~  227 (303)
T d1vjya_         149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-WEIARRCSIGGIHEDYQLP  227 (303)
T ss_dssp             ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHH-HHHHHTBCBTTBCCCCCCT
T ss_pred             EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHH-HHHhhCCCCCCcccccccc
Confidence            999999987654321            111299987653     2588999999996554 332210000    000000


Q ss_pred             hhhhCCCCCCccCHHHHHHHHHhcCC--CCC--------HHHHHHHHH-HHcCCCCCcccHHHHHHHHH
Q 042392          230 FIEMDTDKNGTLSYDELRAGLTKVGS--MLT--------EFDVKQLME-AADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       230 F~~~D~~~~g~i~~~eL~~~l~~~~~--~~s--------~~~i~~l~~-~~d~d~~g~i~~~EF~~~~~  287 (436)
                         +........+..++...+..-+.  .+.        ..++..++. ++..|+..|+++.|.+..+.
T Consensus       228 ---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~  293 (303)
T d1vjya_         228 ---YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  293 (303)
T ss_dssp             ---TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred             ---hhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence               00111123455666665543221  111        123444443 45778889999999877654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.9e-30  Score=247.63  Aligned_cols=193  Identities=21%  Similarity=0.280  Sum_probs=146.8

Q ss_pred             cccccccccccc-cceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcC-------
Q 042392           13 YPILGKPYEDVM-LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------   84 (436)
Q Consensus        13 ~p~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------   84 (436)
                      +|+.  .++.+. ++|+++++||+|+||+||+|+++.+|+.||||++++..     .....+.+|+.+++.+.       
T Consensus         2 ~p~~--~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-----~~~~~~~~Ei~~l~~l~~~~~~~~   74 (362)
T d1q8ya_           2 HPAF--KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKE   74 (362)
T ss_dssp             CCCC--TTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHH
T ss_pred             CCCC--CCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-----cchHHHHHHHHHHHHhcchhhhhh
Confidence            5542  345554 46999999999999999999999999999999997542     23456778888888773       


Q ss_pred             ---CCCCeeeceeeeec--CCeEEEEEeccCCCChHHH-HHH--cCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccCCC
Q 042392           85 ---GQPNIVELKSAHED--ETAVHVVMELCQGGDLFDR-IIA--KGYYSERDAAPVLRAIVNAVNVCHS-MGVMHRDLKP  155 (436)
Q Consensus        85 ---~h~niv~~~~~~~~--~~~~~iv~e~~~~g~L~~~-l~~--~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~Hrdlkp  155 (436)
                         +||||+++++++..  ....++++.++..+..... ...  ...+++..++.++.||+.||.|||+ .||+||||||
T Consensus        75 ~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp  154 (362)
T d1q8ya_          75 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP  154 (362)
T ss_dssp             HHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSG
T ss_pred             hhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCCh
Confidence               36889999998764  3567777777665443333 222  2458999999999999999999998 8999999999


Q ss_pred             CcceeeccCCC---CcEEEEecCCcccccccCCCC-----CCChHHHHHHHHHHHhhhhhhHHHHH
Q 042392          156 ENFCFISRDDN---ALLKVTDFGSALLFEEEGGEA-----SDDTSVILRMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       156 ~Nill~~~~~~---~~~kl~DFG~a~~~~~~~~~~-----~~~pe~~~~~~~~~~~~d~~s~~~~~  213 (436)
                      +|||+...+..   ..++++|||.|..........     ..|||++.+ ..|+.++|+||+|+.+
T Consensus       155 ~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         155 ENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLI  219 (362)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHH
T ss_pred             hHeeeeccCcccccceeeEeecccccccccccccccccccccChhhccc-cCCCccccccchHHHH
Confidence            99999532211   248999999998765543322     228998876 5688999999996654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=1.3e-26  Score=200.18  Aligned_cols=165  Identities=17%  Similarity=0.217  Sum_probs=122.9

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCcc--------------chhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--------------KYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      |.+.+.||+|+||.||+|++ .+|+.||||+++.....              ..........+|...+..+ .|++++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceE
Confidence            56889999999999999998 47999999987542111              0011233456788999999 59999988


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCcccccCCCCcceeeccCCCCcEEEE
Q 042392           93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVT  172 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~Hrdlkp~Nill~~~~~~~~~kl~  172 (436)
                      +++..    .+++|||++++.+.+       ++...+..++.|++.++.|||++||+||||||+|||+   +. ..++|+
T Consensus        80 ~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv---~~-~~~~li  144 (191)
T d1zara2          80 YAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---SE-EGIWII  144 (191)
T ss_dssp             EEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---ET-TEEEEC
T ss_pred             EEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheee---eC-CCEEEE
Confidence            87642    279999998865432       5667778899999999999999999999999999999   33 458999


Q ss_pred             ecCCcccccccCCCCCCChHHHH---------HHHHHHHhhhhhhHHHHH
Q 042392          173 DFGSALLFEEEGGEASDDTSVIL---------RMKQFRRMSKLKKLTVKV  213 (436)
Q Consensus       173 DFG~a~~~~~~~~~~~~~pe~~~---------~~~~~~~~~d~~s~~~~~  213 (436)
                      |||+|+....+.     +.+.+.         -.+.|+..+|+||+.-.+
T Consensus       145 DFG~a~~~~~~~-----~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         145 DFPQSVEVGEEG-----WREILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CCTTCEETTSTT-----HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             ECCCcccCCCCC-----cHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            999998754322     122221         125678899999985443

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=7.3e-23  Score=174.65  Aligned_cols=160  Identities=20%  Similarity=0.288  Sum_probs=138.5

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      +.+++..+|..+|.+.+|.|+.+||..+++.++..++.+++..+++.+|.|++|.|+|.||...+...      ..++++
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~~   89 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREG   89 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHH
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc------cccccc
Confidence            33578999999999999999999999999999999999999999999999999999999999876433      358899


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      |+.+|.+++|+|+..||..++..+                   +...+++++..+++.+|.|++|.|+|+||+.+|....
T Consensus        90 F~~~D~~~~g~I~~~el~~~l~~~-------------------g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~  150 (182)
T d1y1xa_          90 FRKRDSSGDGRLDSNEVRAALLSS-------------------GYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVC  150 (182)
T ss_dssp             HHHHCTTSSSCBCHHHHHHHHHTT-------------------SCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             hhccccccchhhhhHHHHHHHHHh-------------------CCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHH
Confidence            999999999999999997653222                   3345567899999999999999999999999987543


Q ss_pred             ccCCHHHHHHHHHhhccCCCCccc--HHHHHHH
Q 042392          382 KLETPELLEKAFQYLDKNSDQFIT--VNELETA  412 (436)
Q Consensus       382 ~~~~~~~~~~~F~~~D~d~~G~I~--~~el~~~  412 (436)
                            .++.+|+.||.+++|+||  ++||...
T Consensus       151 ------~~~~~F~~~D~~~~G~is~~~~~f~~~  177 (182)
T d1y1xa_         151 ------RVRNVFAFYDRERTGQVTFTFDTFIGG  177 (182)
T ss_dssp             ------HHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             ------HHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence                  588999999999999975  6787653

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.6e-22  Score=171.06  Aligned_cols=162  Identities=20%  Similarity=0.318  Sum_probs=137.5

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC-CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHH
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS  299 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~-~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~  299 (436)
                      .+.+.+..+|..+|++++|.|+.+||..+++.++. ..+.++++.+++.+|.+++|.|+|.||+..+...      ..++
T Consensus        16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~   89 (181)
T d1hqva_          16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQ   89 (181)
T ss_dssp             SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHH
T ss_pred             ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------cccc
Confidence            44567999999999999999999999999988874 4788999999999999999999999999876543      3588


Q ss_pred             HHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       300 ~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      .+|+.+|++++|+|+..+|..++...                   +...+++++..+++.+|.+++|.|+|+||+.++..
T Consensus        90 ~~f~~~D~~~~G~i~~~el~~~l~~~-------------------~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          90 NVFRTYDRDNSGMIDKNELKQALSGF-------------------GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             HHHHHHCTTCCSSBCHHHHHHHHHHH-------------------TBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             cccccccccccchhhhHHHHHHHHHc-------------------CCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            99999999999999999997653322                   34456678999999999999999999999998865


Q ss_pred             hhccCCHHHHHHHHHhhccCCCCcc--cHHHHHHHH
Q 042392          380 IYKLETPELLEKAFQYLDKNSDQFI--TVNELETAF  413 (436)
Q Consensus       380 ~~~~~~~~~~~~~F~~~D~d~~G~I--~~~el~~~l  413 (436)
                      .      +.++.+|+.+|+++||.|  +.+||..++
T Consensus       151 l------~~l~~~F~~~D~~~dG~i~~~~~ef~~~~  180 (181)
T d1hqva_         151 L------QRLTDIFRRYDTDQDGWIQVSYEQYLSMV  180 (181)
T ss_dssp             H------HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred             H------HHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence            3      358999999999999987  467776543

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.9e-22  Score=166.28  Aligned_cols=154  Identities=18%  Similarity=0.220  Sum_probs=127.6

Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhcCC-----CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~~~-----~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      ..+|..+ .+.+|.|+.+||+.+++..+.     +++.+.++.++..+|.|++|+|+|.||+..+..      ...++.+
T Consensus         3 ~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~~   75 (165)
T d1k94a_           3 YTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKEN   75 (165)
T ss_dssp             HHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHHH
Confidence            4567666 567999999999999999875     346788999999999999999999999987543      3468999


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhh
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY  381 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~  381 (436)
                      |+.||+|++|+|+.+||+.++..+                   |..+++++++.+++.+|.  +|.|+|+||+.++... 
T Consensus        76 F~~fD~d~sG~I~~~El~~~l~~~-------------------G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l-  133 (165)
T d1k94a_          76 FMTVDQDGSGTVEHHELRQAIGLM-------------------GYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKL-  133 (165)
T ss_dssp             HHHHCTTCCSBCCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHH-
T ss_pred             HHHhCCCCCCeEcHHHHHHHHHHh-------------------hhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHH-
Confidence            999999999999999997663332                   344556689999999975  6899999999988754 


Q ss_pred             ccCCHHHHHHHHHhhccCCCCcc--cHHHHHHHHH
Q 042392          382 KLETPELLEKAFQYLDKNSDQFI--TVNELETAFK  414 (436)
Q Consensus       382 ~~~~~~~~~~~F~~~D~d~~G~I--~~~el~~~l~  414 (436)
                           +.++.+|+.+|+|++|+|  +.+||.++..
T Consensus       134 -----~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~  163 (165)
T d1k94a_         134 -----RALTDFFRKRDHLQQGSANFIYDDFLQGTM  163 (165)
T ss_dssp             -----HHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred             -----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence                 358899999999999998  5799987654

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.87  E-value=4.9e-22  Score=168.13  Aligned_cols=159  Identities=21%  Similarity=0.296  Sum_probs=129.4

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC--------CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhh
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKL  292 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~--------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~  292 (436)
                      +++.+++++|..+|.+ +|.|+..||+.+++.++.        .++.+.+..++..+|.|++|.|+|.||+..+...   
T Consensus         1 ee~~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~---   76 (173)
T d1alva_           1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---   76 (173)
T ss_dssp             CHHHHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred             ChHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh---
Confidence            4678899999999954 899999999999988642        3578899999999999999999999999876433   


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                         ..++.+|+.||+|++|.|+..||..++..+                   +..++++.+. .+..+|.|++|.|+|+|
T Consensus        77 ---~~~~~~f~~~D~d~~G~I~~~el~~~L~~~-------------------g~~~~~~~~~-~~~~~d~d~~G~i~~~E  133 (173)
T d1alva_          77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAA-------------------GFHLNEHLYS-MIIRRYSDEGGNMDFDN  133 (173)
T ss_dssp             ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-------------------TCCCCHHHHH-HHHHHHTCSSSCBCHHH
T ss_pred             ---hHHHHHHHHhccCCCCeecHHHHHHHHHHH-------------------HHhhHHHHHH-HhhccccCCCCeEeHHH
Confidence               358899999999999999999997664332                   2333444454 45567779999999999


Q ss_pred             HHHHHHhhhccCCHHHHHHHHHhhccCCCCccc--HHHHHHH
Q 042392          373 FVNLMTDIYKLETPELLEKAFQYLDKNSDQFIT--VNELETA  412 (436)
Q Consensus       373 F~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~--~~el~~~  412 (436)
                      |+.++...      +.++++|+.||+|++|.||  .+||..+
T Consensus       134 F~~~~~~~------~~~~~~f~~~D~d~~G~it~~~~efl~~  169 (173)
T d1alva_         134 FISCLVRL------DAMFRAFKSLDKDGTGQIQVNIQEWLQL  169 (173)
T ss_dssp             HHHHHHHH------HHHHHHHHHHSSSCCSEEEEEHHHHHHH
T ss_pred             HHHHHHHH------HHHHHHHHHhCCCCCCcEEecHHHHHHH
Confidence            99988654      4688999999999999996  5676654

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.5e-22  Score=168.17  Aligned_cols=162  Identities=19%  Similarity=0.298  Sum_probs=134.4

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCC-----CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhc
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-----LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLE  293 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~-----~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~  293 (436)
                      |.++...++..|..++ +.+|.|+..||+.++++++.+     ++.+++..++..+|.|++|.|+|.||+..+...    
T Consensus         2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~----   76 (172)
T d1juoa_           2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL----   76 (172)
T ss_dssp             TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH----
T ss_pred             CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh----
Confidence            5566677889999886 779999999999999998754     568899999999999999999999999876543    


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                        ..+..+|+.+|.+++|+|+..|+..++..+                   +..++++++..+++.+|.  +|.|+|+||
T Consensus        77 --~~~~~~f~~~D~d~sG~i~~~El~~~l~~~-------------------g~~ls~~~~~~l~~~~d~--~g~i~~~eF  133 (172)
T d1juoa_          77 --NGWRQHFISFDTDRSGTVDPQELQKALTTM-------------------GFRLSPQAVNSIAKRYST--NGKITFDDY  133 (172)
T ss_dssp             --HHHHHHHHTTCTTCCSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHTCS--SSSEEHHHH
T ss_pred             --hhhhHHHHHhCcCCCCcCCHHHHHHHHHHH-------------------HHhhhHHHHHHHHHHHHh--cCCcCHHHH
Confidence              357889999999999999999997653222                   334456689999999965  688999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhhccCCCCcc--cHHHHHHHHH
Q 042392          374 VNLMTDIYKLETPELLEKAFQYLDKNSDQFI--TVNELETAFK  414 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I--~~~el~~~l~  414 (436)
                      +.+|....      .++++|+.+|+|++|.|  +++||..++.
T Consensus       134 ~~~~~~~~------~~~~~f~~~D~d~~G~Itl~~~eFl~~~l  170 (172)
T d1juoa_         134 IACCVKLR------ALTDSFRRRDTAQQGVVNFPYDDFIQCVM  170 (172)
T ss_dssp             HHHHHHHH------HHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred             HHHHHHHH------HHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence            99887643      68999999999999998  5688887654

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.86  E-value=4.8e-22  Score=170.16  Aligned_cols=161  Identities=22%  Similarity=0.273  Sum_probs=130.3

Q ss_pred             ChhhH-HHHHHHhhhhCCCCCCccCHHHHHHHHHhcC--------CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          219 PGEET-QALKEKFIEMDTDKNGTLSYDELRAGLTKVG--------SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       219 ~~e~~-~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~--------~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +.++. ..++.+|..+| +.+|.|+..||+.+|..++        ..++.+++..++..+|.|++|+|+|.||+..+...
T Consensus        12 ~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~   90 (186)
T d1df0a1          12 NEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI   90 (186)
T ss_dssp             CCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH
Confidence            33343 56899999998 8899999999999998754        34678899999999999999999999999876443


Q ss_pred             hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          290 QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       290 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                            ..++.+|+.+|+|++|+|+..||..++..+              |.     ..+. ++.+++...|.|++|.|+
T Consensus        91 ------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~--------------g~-----~~~~-~~~~~~~~~d~d~dg~I~  144 (186)
T d1df0a1          91 ------QKYQKIYREIDVDRSGTMNSYEMRKALEEA--------------GF-----KLPC-QLHQVIVARFADDELIID  144 (186)
T ss_dssp             ------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHT--------------TE-----ECCH-HHHHHHHHHHCCSTTEEC
T ss_pred             ------HHHHHHHHhhCCCCCCcccHHHHHHHHHHH--------------Hh-----cccH-HHHHHHHHHHcCCCCeEe
Confidence                  468999999999999999999997763322              22     2233 355677779999999999


Q ss_pred             HHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCccc--HHHHHHH
Q 042392          370 FIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFIT--VNELETA  412 (436)
Q Consensus       370 f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~--~~el~~~  412 (436)
                      |+||+.++...      +.++++|+.+|+|++|+||  .+||...
T Consensus       145 f~eFi~~~~~l------~~~~~~F~~~D~~~~G~i~l~~~ef~~~  183 (186)
T d1df0a1         145 FDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSF  183 (186)
T ss_dssp             HHHHHHHHHHH------HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHH------HHHHHHHHHhCCCCCCcEEecHHHHHHH
Confidence            99999988654      4789999999999999985  5666543

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.86  E-value=2.1e-21  Score=159.48  Aligned_cols=143  Identities=29%  Similarity=0.519  Sum_probs=125.6

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh-hccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK-LERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~-~~~~  295 (436)
                      +++++++..++.+|..+|.+++|.|+.+++..++...+..++...+..+++.+|.+++|.|+|.||+..+..... ....
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            578899999999999999999999999999999999999999999999999999999999999999998765533 3456


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++++|+.+|.|++|+|+..||...+..              +     +..++++++.++++.+|.|++|.|+|+||+.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~--------------~-----~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~  142 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTN--------------L-----GEKLTDDEVDEMIREADIDGDGHINYEEFVR  142 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHH--------------T-----TCCCCHHHHHHHHHHHCSSSSSSBCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHH--------------H-----hhcCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            78999999999999999999999765222              1     3345667899999999999999999999999


Q ss_pred             HHH
Q 042392          376 LMT  378 (436)
Q Consensus       376 ~~~  378 (436)
                      ++.
T Consensus       143 ~l~  145 (146)
T d1exra_         143 MMV  145 (146)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            874

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.85  E-value=5.2e-22  Score=169.23  Aligned_cols=160  Identities=23%  Similarity=0.272  Sum_probs=114.5

Q ss_pred             ChhhH-HHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC--------CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          219 PGEET-QALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       219 ~~e~~-~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~--------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +++++ +.++++|..+|. .+|.|+..||+.++...+.        .++.+.++.++..+|.|++|+|+|+||...+...
T Consensus        14 s~~~~~~~~r~~F~~~d~-~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~   92 (188)
T d1qxpa2          14 SEEEIDDNFKTLFSKLAG-DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI   92 (188)
T ss_dssp             -------------CCCCC-SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcC-CCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Confidence            44454 358899999995 4899999999998876543        3577889999999999999999999999876433


Q ss_pred             hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          290 QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       290 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                            ..++.+|+.||+|++|+|+..||..++..+              |.     ..+++.+..++.. +.|++|.|+
T Consensus        93 ------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~--------------g~-----~~~~~~~~~l~~~-~~~~dg~i~  146 (188)
T d1qxpa2          93 ------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAA--------------GF-----KLPCQLHQVIVAR-FADDELIID  146 (188)
T ss_dssp             ------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHT--------------TE-----ECCHHHHHHHHHH-TSCSSSBCC
T ss_pred             ------HHHHHHHHHhCCCCCCEECHHHHHHHHHHh--------------hh-----cCCHHHHHHHHHH-hcCCCCcCC
Confidence                  468999999999999999999997663322              32     2344445555554 679999999


Q ss_pred             HHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcc--cHHHHHH
Q 042392          370 FIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI--TVNELET  411 (436)
Q Consensus       370 f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I--~~~el~~  411 (436)
                      |+||+.++..+.      .+..+|+.+|++++|+|  +.+||..
T Consensus       147 f~eFi~~~~~l~------~~~~~F~~~D~~~~G~i~l~~~efl~  184 (188)
T d1qxpa2         147 FDNFVRCLVRLE------ILFKIFKQLDPENTGTIQLDLISWLS  184 (188)
T ss_dssp             HHHHHHHHHHHH------HHHHHHHHSCSSCCSCEEEEHHHHHH
T ss_pred             HHHHHHHHHHHH------HHHHHHHHhCCCCCCeEEeeHHHHHH
Confidence            999999887543      57889999999999988  5555543

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.84  E-value=3.8e-21  Score=156.99  Aligned_cols=138  Identities=17%  Similarity=0.391  Sum_probs=119.4

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~  296 (436)
                      ++++++..++.+|..+|.+++|.|+..+|..+++.+|.+++.+++..+++    +++|.|+|.||+..+.... .....+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~   76 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE   76 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence            47899999999999999999999999999999999999999999988875    5689999999999887653 344567


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.||+|++|+|+..||..++..+                   +.+++++++.++++.+|.| +|.|+|+||+.+
T Consensus        77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~-------------------g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~  136 (142)
T d1wdcb_          77 TIRNAFAMFDEQETKKLNIEYIKDLLENM-------------------GDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAM  136 (142)
T ss_dssp             HHHHHHHTTCTTCCSCEEHHHHHHHHHHS-------------------SSCCCHHHHHHHHHHCCEE-TTEECHHHHHHH
T ss_pred             hHHHhhhhhcccCCCcccHHHHHHHHHHc-------------------cccCCHHHHHHHHHHhCCC-CCEEcHHHHHHH
Confidence            89999999999999999999997653322                   4456677899999999998 699999999998


Q ss_pred             HHh
Q 042392          377 MTD  379 (436)
Q Consensus       377 ~~~  379 (436)
                      +..
T Consensus       137 l~~  139 (142)
T d1wdcb_         137 IKG  139 (142)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            864

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=2.2e-20  Score=153.26  Aligned_cols=143  Identities=28%  Similarity=0.444  Sum_probs=125.1

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh-hcc
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK-LER  294 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~-~~~  294 (436)
                      ..++++++..++.+|..+|.+.+|.|+.+||..++...+..++..++..++...+.++.+.++|.+|...+..... ...
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   81 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence            3578999999999999999999999999999999999999999999999999999999999999999998765543 334


Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .+.++.+|+.+|++++|+|+..||..++..+                   +..++++++.++++.+| |++|.|+|+||+
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~  141 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-------------------GEKLTDAEVDDMLREVS-DGSGEINIQQFA  141 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHH-------------------TCSCCHHHHHHHHHHHC-CSSSEEEHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-------------------CCcccHHHHHHHHHhcc-CCCCeEeHHHHH
Confidence            5679999999999999999999997663332                   34456668999999999 999999999999


Q ss_pred             HHHH
Q 042392          375 NLMT  378 (436)
Q Consensus       375 ~~~~  378 (436)
                      .+|.
T Consensus       142 ~~m~  145 (146)
T d1lkja_         142 ALLS  145 (146)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            9875

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.82  E-value=7.5e-20  Score=151.83  Aligned_cols=146  Identities=27%  Similarity=0.458  Sum_probs=125.0

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCC-CCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh----
Q 042392          215 VEYLPGEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR----  289 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~----  289 (436)
                      ...+++++...++.+|..+|.++ +|.|+..|+..+++.+|..++..++..++..++.+++|.+++.+|.......    
T Consensus         5 ~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (156)
T d1dtla_           5 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD   84 (156)
T ss_dssp             GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred             HHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc
Confidence            35679999999999999999985 7999999999999999999999999999999999999999999998765533    


Q ss_pred             hhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          290 QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       290 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ......+.++.+|+.||.|++|+|+..||..++..+                   +..++++++.++++.+|.|+||.|+
T Consensus        85 ~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~-------------------~~~ls~~e~~~i~~~~D~d~dG~I~  145 (156)
T d1dtla_          85 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------GETITEDDIEELMKDGDKNNDGRID  145 (156)
T ss_dssp             ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---------------------CCCHHHHHHHHHHHCTTSSSEEE
T ss_pred             ccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhc-------------------CCCCCHHHHHHHHHHhCCCCCCeEe
Confidence            233456779999999999999999999997663222                   4566778899999999999999999


Q ss_pred             HHHHHHHHHh
Q 042392          370 FIEFVNLMTD  379 (436)
Q Consensus       370 f~EF~~~~~~  379 (436)
                      |+||+.+|..
T Consensus       146 ~~eF~~~l~g  155 (156)
T d1dtla_         146 YDEFLEFMKG  155 (156)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHcC
Confidence            9999998853

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.9e-20  Score=150.83  Aligned_cols=140  Identities=24%  Similarity=0.480  Sum_probs=122.1

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSEY  297 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~~  297 (436)
                      ++++.+.++++|..+|.+++|.|+..||..+++.++..++...+..++..+|.+++|.|+|.||...+.... .......
T Consensus         1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~   80 (141)
T d2obha1           1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE   80 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence            357788999999999999999999999999999999999999999999999999999999999999876543 3344677


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++.+|..+|.+++|.|+..+|...+..              +     +..++.+++..+|+.+|.|++|.|+|+||+.+|
T Consensus        81 l~~~f~~~d~~~~G~i~~~el~~~l~~--------------~-----g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          81 ILKAFKLFDDDETGKISFKNLKRVAKE--------------L-----GENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHH--------------T-----TCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCccHHHHHHHHHH--------------h-----CCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            999999999999999999999755222              2     344566789999999999999999999999875

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.81  E-value=4.1e-20  Score=154.47  Aligned_cols=145  Identities=27%  Similarity=0.467  Sum_probs=121.5

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh----h
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ----K  291 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~----~  291 (436)
                      ..++++++..++++|..+|++++|.|+.+||..++..++..++...+..++..+|.+++|.++|.||+..+....    .
T Consensus        12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~   91 (162)
T d1topa_          12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK   91 (162)
T ss_dssp             HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcc
Confidence            347899999999999999999999999999999999999999999999999999999999999999988765442    2


Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+.++.+|+.+|.|++|+|+..||..++..              .     +...+.+++..+|+.+|.|++|.|+|+
T Consensus        92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~--------------~-----~~~~~~~~~~~l~~~~D~d~dG~Is~~  152 (162)
T d1topa_          92 GKSEEELANCFRIFDKNADGFIDIEELGEILRA--------------T-----GEHVTEEDIEDLMKDSDKNNDGRIDFD  152 (162)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHT--------------T-----TCCCCHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             cCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh--------------h-----CCCCCHHHHHHHHHHhCCCCCCcEEHH
Confidence            234556788999999999999999888655221              1     233345678889999999999999999


Q ss_pred             HHHHHHHh
Q 042392          372 EFVNLMTD  379 (436)
Q Consensus       372 EF~~~~~~  379 (436)
                      ||+.+|..
T Consensus       153 EF~~~l~~  160 (162)
T d1topa_         153 EFLKMMEG  160 (162)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHHc
Confidence            99988754

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.81  E-value=2.7e-20  Score=173.47  Aligned_cols=188  Identities=19%  Similarity=0.326  Sum_probs=160.2

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      .++.++...++.+|..+|.+++|.|+.+||..+++.++..++..++..++..+|.|++|.|+|.||+..+....      
T Consensus       115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------  188 (321)
T d1ij5a_         115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLA------  188 (321)
T ss_dssp             CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHH------
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhh------
Confidence            45788889999999999999999999999999999999999999999999999999999999999997765443      


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .+..+|+.+|.+++|.++..++......              .+...      ......+++.++.+.+|.+++.+|...
T Consensus       189 ~~~~~F~~~d~d~~~~i~~~~~~~~~~~--------------~~~~~------~~~~~~~~~~~~~~~~~~i~~~ef~~~  248 (321)
T d1ij5a_         189 ALVADFRKIDTNSNGTLSRKEFREHFVR--------------LGFDK------KSVQDALFRYADEDESDDVGFSEYVHL  248 (321)
T ss_dssp             TSCCCHHHHCTTCCSEECHHHHHHHHHH--------------TTCCC------HHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             hhhHHHHHHhhcccccchhHHHhhhhhc--------------ccccc------hHHHHHHHHhhhcccccccccccccch
Confidence            2456799999999999999998654222              22221      224677888899999999999999987


Q ss_pred             HHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC--ChHHHHHHHHhhccCCC
Q 042392          377 MTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG--DDATIKEIISEVGRDHK  436 (436)
Q Consensus       377 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~--~~~e~~~~~~~~d~~~d  436 (436)
                      .....      .+..+|+.+|.|++|+||.+||+.++...+.+  +++++..|++.+|.|+|
T Consensus       249 ~~~~~------~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~d  304 (321)
T d1ij5a_         249 GLCLL------VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDS  304 (321)
T ss_dssp             HHHHH------HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTC
T ss_pred             hhhhh------HHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCC
Confidence            65433      57889999999999999999999999998864  78899999999999986

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.80  E-value=8e-20  Score=149.66  Aligned_cols=137  Identities=17%  Similarity=0.265  Sum_probs=115.5

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC--CCCcccHHHHHHHHHhhh---hhccHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD--GNGAIDYTEFTAATIQRQ---KLERSEY  297 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d--~~g~i~~~EF~~~~~~~~---~~~~~~~  297 (436)
                      .+.++++|..+|.+++|.|+..||..+++.+|..++..++..++..++.+  ++|.|+|.||+..+....   .......
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   82 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED   82 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence            45688999999999999999999999999999999999999999988766  578999999998875432   2345667


Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++++|+.||+|++|+|+..||+.++..+                   +.+++.+++..+++. |.|++|.|+|+||+.++
T Consensus        83 l~~aF~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~l  142 (145)
T d2mysc_          83 FVEGLRVFDKEGNGTVMGAELRHVLATL-------------------GEKMTEEEVEELMKG-QEDSNGCINYEAFVKHI  142 (145)
T ss_pred             HHHHHHHhhcCCCCEEcHHHHHHHHHHh-------------------CCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHH
Confidence            9999999999999999999997763322                   445677789999975 78999999999999876


Q ss_pred             Hh
Q 042392          378 TD  379 (436)
Q Consensus       378 ~~  379 (436)
                      ..
T Consensus       143 l~  144 (145)
T d2mysc_         143 MS  144 (145)
T ss_pred             hc
Confidence            53

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.80  E-value=1.1e-19  Score=148.09  Aligned_cols=121  Identities=13%  Similarity=0.303  Sum_probs=101.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      +++.++++++|..||.|++|.|+..||..++..+              |     ..+++.++..+++    +++|.|+|+
T Consensus         3 ~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~l--------------g-----~~~~~~el~~~~~----~~~~~i~~~   59 (142)
T d1wdcb_           3 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL--------------G-----RAPDDKELTAMLK----EAPGPLNFT   59 (142)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHH--------------S-----SCCCHHHHHHHHT----TSSSCCCHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHh--------------h-----cCCCHHHHHHHHH----hccCccccc
Confidence            4566789999999999999999999997664333              3     3445667888875    568999999


Q ss_pred             HHHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCC
Q 042392          372 EFVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDH  435 (436)
Q Consensus       372 EF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~  435 (436)
                      ||+.++...... ...+.++.||+.||+|++|+|+.+||+++|..+|.+ +++|+++|++.+|.|+
T Consensus        60 eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~~  125 (142)
T d1wdcb_          60 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG  125 (142)
T ss_dssp             HHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEET
T ss_pred             cccccccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCCC
Confidence            999988765443 446789999999999999999999999999999988 9999999999998763

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.78  E-value=2e-19  Score=147.24  Aligned_cols=122  Identities=15%  Similarity=0.217  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC--CCCcccHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID--GNGNIDFIE  372 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~f~E  372 (436)
                      .++++++|+.||+|++|+|+..||..+++.+                   |..++..++.+++..++.+  ++|.|+|+|
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~l-------------------g~~~~~~e~~~~~~~~~~d~~~~g~i~~~e   63 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARAL-------------------GQNPTNAEINKILGNPSKEEMNAAAITFEE   63 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHh-------------------hhcchhhhhHHHHHHHhhcccccCccchhH
Confidence            4689999999999999999999997764333                   4455666888999887655  688999999


Q ss_pred             HHHHHHhhhcc---CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKL---ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~---~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++......   ...+.++.+|+.||+|++|+|+.+||+++|..+|.+ +++|++.|++. |.|+|
T Consensus        64 F~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~d  130 (145)
T d2mysc_          64 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSN  130 (145)
T ss_pred             HHHHHhhhhhccccchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCC
Confidence            99988654332   234679999999999999999999999999999988 99999999975 65654

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.78  E-value=1.1e-19  Score=149.91  Aligned_cols=142  Identities=18%  Similarity=0.229  Sum_probs=118.6

Q ss_pred             CChhhHHHHHHHhhhhCC--CCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh--hhc
Q 042392          218 LPGEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ--KLE  293 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~--~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~--~~~  293 (436)
                      ++++++..++++|..+|.  +.+|.|+..||..+++.+|..++.+++..+. ..+.+++|.|+|.||+..+....  ...
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~   79 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG   79 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence            467889999999999994  7889999999999999999999999998764 45778899999999999876553  234


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC--CCCcccHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID--GNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~f~  371 (436)
                      ..+.++++|+.||.+++|+|+..+|..++..+                   +..++++++.++++.+|.+  ++|.|+|+
T Consensus        80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~-------------------g~~ls~~e~~~l~~~~d~~~d~~G~I~y~  140 (152)
T d1wdcc_          80 TFADYMEAFKTFDREGQGFISGAELRHVLTAL-------------------GERLSDEDVDEIIKLTDLQEDLEGNVKYE  140 (152)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-------------------SSCCCHHHHHHHHHHHTCCCCTTSEEEHH
T ss_pred             HHHhhhhhhhccccccCccchHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhccCCCCCCEEEHH
Confidence            56789999999999999999999997663322                   4456677899999998864  56899999


Q ss_pred             HHHHHHHh
Q 042392          372 EFVNLMTD  379 (436)
Q Consensus       372 EF~~~~~~  379 (436)
                      ||+..|..
T Consensus       141 eF~~~~~~  148 (152)
T d1wdcc_         141 DFVKKVMA  148 (152)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99987753

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.78  E-value=1.4e-19  Score=147.19  Aligned_cols=131  Identities=17%  Similarity=0.264  Sum_probs=112.1

Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh---hhccHHHHHH
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ---KLERSEYLSK  300 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~---~~~~~~~l~~  300 (436)
                      ..++++|..+|.+++|.|+.+||..+++.+|.+++.+++..+    +.+++|.|+|.+|+..+....   .....+.+++
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~   80 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence            457899999999999999999999999999999999887654    668899999999999886442   2345678999


Q ss_pred             HHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          301 AFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       301 ~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +|+.+|++++|+|+..||..++..+                   +.+++.+++.++++.+|.| +|.|+|+||+.+|.
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~-------------------g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~  138 (140)
T d1ggwa_          81 GFQVFDKDATGMIGVGELRYVLTSL-------------------GEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHHH-------------------HSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred             HHHHHhccCCCcchHHHHHHHHHHc-------------------CCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence            9999999999999999998764333                   4556777899999999988 99999999999875

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.78  E-value=1.8e-19  Score=145.47  Aligned_cols=128  Identities=24%  Similarity=0.377  Sum_probs=106.1

Q ss_pred             HHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh---hhccHHHHHHHHH
Q 042392          227 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ---KLERSEYLSKAFQ  303 (436)
Q Consensus       227 ~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~---~~~~~~~l~~~F~  303 (436)
                      ..+|+.+|.+++|.|+..||..++..++..++.+++..+|+.+|.+++|.|+|.||+..+....   .......++.+|+
T Consensus         3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~   82 (134)
T d1jfja_           3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK   82 (134)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            5789999999999999999999999999999999999999999999999999999998875432   2233456889999


Q ss_pred             HhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          304 YFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       304 ~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      .+|.+++|+|+..|+...+..              +         ..+.+.++|+.+|.|+||.|+|+||+.+|
T Consensus        83 ~~D~~~~g~i~~~el~~~~~~--------------~---------~~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          83 LMDVDGDGKLTKEEVTSFFKK--------------H---------GIEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHCCSSSSEEEHHHHHHHHTT--------------T---------TCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ccccccCCcccHHHHHHHHHh--------------c---------CcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            999999999998888654211              1         11357778888899999999999998876

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.78  E-value=2.8e-19  Score=147.57  Aligned_cols=124  Identities=18%  Similarity=0.220  Sum_probs=102.3

Q ss_pred             ccHHHHHHHHHHhCC--CCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDK--DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~--~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ++.++++++|..||.  |++|.|+.+||..++++              +|+     .+++.++..+ ...+.+++|.|+|
T Consensus         4 eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~--------------lG~-----~~t~~e~~~~-~~~~~~~~~~i~~   63 (152)
T d1wdcc_           4 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC--------------LGI-----NPRNEDVFAV-GGTHKMGEKSLPF   63 (152)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH--------------TTC-----CCCHHHHHHT-TCCSSTTSCEECH
T ss_pred             HHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHH--------------hcc-----CccHhhhhhh-hhhhccccccccc
Confidence            345679999999994  89999999999766433              344     3455677665 4568889999999


Q ss_pred             HHHHHHHHhhhc--cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYK--LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++.....  ....++++.||+.||+|++|+|+.+||+++|..+|.+ +++|+++|++.+|.++|
T Consensus        64 ~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d  132 (152)
T d1wdcc_          64 EEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED  132 (152)
T ss_dssp             HHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCC
T ss_pred             cccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCC
Confidence            999998876543  3456789999999999999999999999999999999 99999999999987543

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.78  E-value=3.6e-19  Score=145.64  Aligned_cols=140  Identities=20%  Similarity=0.293  Sum_probs=115.4

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh-hhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR-QKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~-~~~~~~~  296 (436)
                      ++++++..++++|..+|.+++|.|+.++|..+++.+|..++..+.   +..++.+.+|.|+|.+|+..+... ......+
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~   77 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKGADPED   77 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccccchHH
Confidence            367889999999999999999999999999999999865554432   344555788999999999987654 3344556


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.||.+++|+|+..+|+.++..+                   |.+++++++..+++.+|.|++|.|+|.||+.+
T Consensus        78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~-------------------g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~  138 (145)
T d2mysb_          78 VIMGAFKVLDPDGKGSIKKSFLEELLTTG-------------------GGRFTPEEIKNMWAAFPPDVAGNVDYKNICYV  138 (145)
T ss_pred             HHHHHHHhhhhcccchhhHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            79999999999999999999997763332                   45567788999999999999999999999998


Q ss_pred             HHh
Q 042392          377 MTD  379 (436)
Q Consensus       377 ~~~  379 (436)
                      |..
T Consensus       139 l~~  141 (145)
T d2mysb_         139 ITH  141 (145)
T ss_pred             hcc
Confidence            864

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.77  E-value=5.3e-20  Score=156.66  Aligned_cols=145  Identities=46%  Similarity=0.713  Sum_probs=127.5

Q ss_pred             hcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      ..++++++..++++|..+|.+.+|.|+.+||..++..++..++..++..+++.+|.+++|.|+|.+|+..+.........
T Consensus         2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   81 (182)
T d1s6ia_           2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (182)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence            45788889999999999999999999999999999999999999999999999999999999999999987766655566


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+.+|.+++|+|+..+|..++..              +|+       ++.++..+++.+|.|+||.|+|+||+.
T Consensus        82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~--------------~gl-------~~~ev~~~f~~~D~d~DG~Is~~EF~~  140 (182)
T d1s6ia_          82 ENLVSAFSYFDKDGSGYITLDEIQQACKD--------------FGL-------DDIHIDDMIKEIDQDNDGQIDYGEFAA  140 (182)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTT--------------TTC-------CTTHHHHHHHHHCSSSSSEEETTHHHH
T ss_pred             HHHHHHHHHHhhcCCCccchhhhhhhhhh--------------cCc-------cHHHHHHHHHHhhcCCCCeEeHHHHHH
Confidence            67899999999999999999999766322              222       334799999999999999999999999


Q ss_pred             HHHhhh
Q 042392          376 LMTDIY  381 (436)
Q Consensus       376 ~~~~~~  381 (436)
                      +|....
T Consensus       141 ~m~~~~  146 (182)
T d1s6ia_         141 MMRKRK  146 (182)
T ss_dssp             TTSCCC
T ss_pred             HHHhCc
Confidence            887543

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.77  E-value=5.4e-19  Score=144.82  Aligned_cols=124  Identities=28%  Similarity=0.427  Sum_probs=97.3

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      +..+++++|..+|+|++|+|+..+|..++...                   +..++...+..+++.+|.+++|.|+|+||
T Consensus         7 e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~-------------------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef   67 (146)
T d1exra_           7 QIAEFKEAFALFDKDGDGTITTKELGTVMRSL-------------------GQNPTEAELQDMINEVDADGNGTIDFPEF   67 (146)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCeECHHHHHHHHHhc-------------------CCCCCHHHHHHHHHhcCCCCCCcccHHHH
Confidence            44578889999999999998888886653222                   23345567888888899999999999999


Q ss_pred             HHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.++...... ...+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++++++.+|.|+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~d  132 (146)
T d1exra_          68 LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGD  132 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSS
T ss_pred             HHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCC
Confidence            8877554332 224578899999999999999999999999888877 88889999999888765

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.76  E-value=2.4e-19  Score=145.72  Aligned_cols=116  Identities=18%  Similarity=0.299  Sum_probs=96.5

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ..++++|..||+|++|+|+.+||..+++              .+|..     ++++++..+    +.+++|.|+|+||+.
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~--------------~lg~~-----~t~~ei~~~----~~~~~~~i~~~eF~~   61 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLR--------------ACGQN-----PTLAEITEI----ESTLPAEVDMEQFLQ   61 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHH--------------HTSCC-----CCHHHHHHH----HTTSCSSEEHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHH--------------HHHhh-----hHHHhhhhh----hccccccccchhhhh
Confidence            4689999999999999999999976633              33443     444455544    678899999999999


Q ss_pred             HHHhhhc---cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccC
Q 042392          376 LMTDIYK---LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRD  434 (436)
Q Consensus       376 ~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~  434 (436)
                      ++.....   ....++++.||+.||+|++|+|+.+||+++|..+|.+ +++|+++|++.+|.|
T Consensus        62 ~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~  124 (140)
T d1ggwa_          62 VLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK  124 (140)
T ss_dssp             HHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS
T ss_pred             hhhhhhhcchhhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC
Confidence            8875433   2346789999999999999999999999999999988 999999999999876

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=145.82  Aligned_cols=148  Identities=26%  Similarity=0.452  Sum_probs=118.0

Q ss_pred             HhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh-hc
Q 042392          215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQK-LE  293 (436)
Q Consensus       215 ~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~-~~  293 (436)
                      +..++++++..++++|..+|.+++|.|+.+||..++.....+    .++.+|+.+|.+++|.|+|.||+..+..... ..
T Consensus         7 ~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~   82 (165)
T d1auib_           7 CSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD   82 (165)
T ss_dssp             CCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccchh
Confidence            346799999999999999999999999999998776554433    3678999999999999999999998877643 34


Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++.+|+.+|.|++|+|+..|+...+...      .       + .......++..+..+++.+|.|++|.|+|+||
T Consensus        83 ~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~------~-------~-~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF  148 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMM------V-------G-NNLKDTQLQQIVDKTIINADKDGDGRISFEEF  148 (165)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH------H-------T-TSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHH
T ss_pred             hHHHHHHHHHHhcccccccccHHHHHHHHHHh------c-------c-ccCchHHHHHHHHHHHHHcCCCCCCcEeHHHH
Confidence            56679999999999999999999987542221      0       1 11234455667888899999999999999999


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.+|...
T Consensus       149 ~~i~~~~  155 (165)
T d1auib_         149 CAVVGGL  155 (165)
T ss_dssp             HHHHGGG
T ss_pred             HHHHhcC
Confidence            8888643

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=3.6e-18  Score=146.23  Aligned_cols=104  Identities=20%  Similarity=0.274  Sum_probs=87.9

Q ss_pred             hhHHHHHHHhhhhC-CCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHH
Q 042392          221 EETQALKEKFIEMD-TDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS  299 (436)
Q Consensus       221 e~~~~l~~~F~~~D-~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~  299 (436)
                      -....++.+|..|. ..++|.|+.+||..++...+...+...++.+|+.+|.|++|.|+|.||+..+.........+.++
T Consensus        18 ~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~   97 (189)
T d1jbaa_          18 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK   97 (189)
T ss_dssp             HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred             cCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHH
Confidence            33445555555554 34689999999999999999889999999999999999999999999999988776666778899


Q ss_pred             HHHHHhCCCCCCchhhhhhhcCcch
Q 042392          300 KAFQYFDKDNSGYDEFRAMVESPQT  324 (436)
Q Consensus       300 ~~F~~~D~~~~G~i~~~el~~~~~~  324 (436)
                      .+|+.||.|++|.|+..|+...+..
T Consensus        98 ~~F~~~D~d~~g~i~~~E~~~~~~~  122 (189)
T d1jbaa_          98 WTFKIYDKDRNGCIDRQELLDIVES  122 (189)
T ss_dssp             HHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             HHHhhhccCCCCcccHhHHHHHHHH
Confidence            9999999999999999999765433

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=5.4e-19  Score=144.82  Aligned_cols=134  Identities=21%  Similarity=0.305  Sum_probs=110.3

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHH-HcCCCCCcccHHHHHHHHHhhh------hhccHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA-ADMDGNGAIDYTEFTAATIQRQ------KLERSEYL  298 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~-~d~d~~g~i~~~EF~~~~~~~~------~~~~~~~l  298 (436)
                      ++++|..+|.+.+|.|+.+||..+++.+|..++.+++..++.. .+.+.+|.|+|.+|...+....      .....+.+
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l   83 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF   83 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence            4678999999999999999999999999999999999999874 5566778999999998865332      22345679


Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      .++|+.+|.+++|+|+..||..++..+                   +..++++++.+++..+|.|++|.|+|+||+.++.
T Consensus        84 ~~~F~~~D~~~~G~I~~~el~~~l~~~-------------------g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          84 VKAFQVFDKESTGKVSVGDLRYMLTGL-------------------GEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             HHHHHTTCSSSSSEEEHHHHHHHHHHS-------------------TTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHHHHhhccccccccchhhhhhhhccc-------------------CCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            999999999999999999997663322                   3455677899999999999999999999998764

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.7e-18  Score=143.22  Aligned_cols=165  Identities=18%  Similarity=0.184  Sum_probs=126.1

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCH-HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~-~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      +++.++..+...|...+  ++|.++..++..++..++...+. .-+..+|..+|.+++|.|+|.||+..+.........+
T Consensus        19 fs~~Ei~~l~~~F~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e   96 (187)
T d1g8ia_          19 FTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE   96 (187)
T ss_dssp             SCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHH
T ss_pred             CCHHHHHHHHHHHHHHC--CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhh
Confidence            57888888888886654  67999999999999988766554 4458899999999999999999999988777666778


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.||.|++|+|+..|+..++..+-..   .    .............++.++.+|+.+|.|+||.|+|+||..+
T Consensus        97 ~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~---~----~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~  169 (187)
T d1g8ia_          97 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM---V----GNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG  169 (187)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHH---C---------CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhh---h----cccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            89999999999999999999997664333111   0    0001111233445667888999999999999999999998


Q ss_pred             HHhhhccCCHHHHHHHHHhhc
Q 042392          377 MTDIYKLETPELLEKAFQYLD  397 (436)
Q Consensus       377 ~~~~~~~~~~~~~~~~F~~~D  397 (436)
                      +....      .+.+.|..||
T Consensus       170 ~~~~p------~~~~~l~~~~  184 (187)
T d1g8ia_         170 SKADP------SIVQALSLYD  184 (187)
T ss_dssp             HHHCH------HHHHHHCCBT
T ss_pred             HHHCH------HHHHHHHHhh
Confidence            77522      4677777766

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=3.6e-18  Score=146.24  Aligned_cols=165  Identities=20%  Similarity=0.200  Sum_probs=125.8

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCH-HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~-~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      ++..++..+...|...  .++|.++..++...+..++...+. ..++.+|..+|.+++|.|+|.||+.++.........+
T Consensus        22 fs~~Ei~~l~~~F~~~--~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e   99 (190)
T d1fpwa_          22 FDRREIQQWHKGFLRD--CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE   99 (190)
T ss_dssp             STHHHHHHHHHHHHHH--CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred             CCHHHHHHHHHHHHHH--CCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHH
Confidence            5788888888888554  468999999999999988755554 4478999999999999999999999988776666778


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.||.|++|.|+..|+...+..+......      .. .........+..+.++|+.+|.|+||.|+|+||..+
T Consensus       100 ~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~  172 (190)
T d1fpwa_         100 KLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGS------MV-TLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG  172 (190)
T ss_dssp             HHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCS------TT-SSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHH
T ss_pred             HHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhccc------cc-CCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            99999999999999999999997664333111000      00 011112234567888999999999999999999988


Q ss_pred             HHhhhccCCHHHHHHHHHhhc
Q 042392          377 MTDIYKLETPELLEKAFQYLD  397 (436)
Q Consensus       377 ~~~~~~~~~~~~~~~~F~~~D  397 (436)
                      +....      .+.++|..||
T Consensus       173 ~~~~p------~i~~~l~~~d  187 (190)
T d1fpwa_         173 SKVDP------SIIGALNLYD  187 (190)
T ss_dssp             HHSST------THHHHHHHHH
T ss_pred             HHHCH------HHHHHhhhhc
Confidence            76422      4677888887

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=5e-18  Score=138.93  Aligned_cols=125  Identities=29%  Similarity=0.421  Sum_probs=105.5

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++..+++++|+.||.|++|+|++.||..++...                   +..+++..+..++...+.++++.++|+
T Consensus         6 ~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (146)
T d1lkja_           6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-------------------GLSPSEAEVNDLMNEIDVDGNHQIEFS   66 (146)
T ss_dssp             HHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCSSSCCEEEHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc-------------------CCCCCHHHHHHHHHHhccCCcccccHH
Confidence            4456779999999999999999999997653222                   334456678899999999999999999


Q ss_pred             HHHHHHHhhhccCC-HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKLET-PELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~~~-~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +|...+........ .+.++.||+.||+|++|+|+.+||+.+|..+|.. +++++++|++++| |+|
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~d  132 (146)
T d1lkja_          67 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGS  132 (146)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSS
T ss_pred             HHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCC
Confidence            99998877655444 4679999999999999999999999999999988 9999999999998 765

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.6e-18  Score=138.94  Aligned_cols=125  Identities=26%  Similarity=0.418  Sum_probs=103.4

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++.++++++|..+|+|++|+|+..||..++..              .     +..++...+..++..+|.+++|.|+|+|
T Consensus         3 ~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~--------------~-----~~~~~~~~~~~~~~~~d~~~~g~i~~~e   63 (141)
T d2obha1           3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRA--------------L-----GFEPKKEEIKKMISEIDKEGTGKMNFGD   63 (141)
T ss_dssp             HHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHH--------------T-----TCCCCHHHHHHHHHHHTTTCCSEEEHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHh--------------c-----CCchhHHHHHHHHHhhccCCCCeechHH
Confidence            35568999999999999999999999655222              2     3344556788999999999999999999


Q ss_pred             HHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |...+...... ...+.++.+|+.+|++++|+|+.+||+.++..+|.. +++++.++++.+|.|+|
T Consensus        64 f~~~~~~~~~~~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~d  129 (141)
T d2obha1          64 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD  129 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHhhhccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCC
Confidence            99887654332 224679999999999999999999999999999988 99999999999999876

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.73  E-value=6.7e-18  Score=140.77  Aligned_cols=125  Identities=26%  Similarity=0.422  Sum_probs=80.5

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      +...+++++|+.+|+|++|+|+..||..++...                   +..+++..+..++..+|.+++|.++|.|
T Consensus        17 ~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~-------------------~~~~~~~~~~~~~~~~d~~~~~~~~~~e   77 (162)
T d1topa_          17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRML-------------------GQNPTKEELDAIIEEVDEDGSGTIDFEE   77 (162)
T ss_dssp             HHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHT-------------------TCCCCHHHHHHHHHHHCTTSCCEEEHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhcc-------------------CCchhHHHHHhhhheeccCCCCCeeeeh
Confidence            344567777777777777777777775442211                   2233344677777777777777777777


Q ss_pred             HHHHHHhhhc----cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYK----LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~----~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+..+.....    ....+.++.+|+.||+|++|+|+.+||+.+|...+.. ++++++.||+.+|.|+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~d  146 (162)
T d1topa_          78 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNND  146 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCS
T ss_pred             hhhhhhhhhhhhcccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCC
Confidence            7665443221    1123456777777777777777777777777776666 77777777777777664

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.72  E-value=4.5e-18  Score=139.01  Aligned_cols=122  Identities=19%  Similarity=0.233  Sum_probs=98.0

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+..+++++|..+|.+++|+|+.++|..++..+              |...    ++.    +++..++.+++|.|+|+|
T Consensus         4 ~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~l--------------g~~~----~~~----~~~~~~~~~~~g~i~~~e   61 (145)
T d2mysb_           4 TEIEDFKEAFTVIDQNADGIIDKDDLRETFAAM--------------GRLN----VKN----EELDAMIKEASGPINFTV   61 (145)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHh--------------CCCc----chH----HHHHHHHHhccCceeech
Confidence            446679999999999999999999997664332              3222    122    233445567889999999


Q ss_pred             HHHHHHhhhc-cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      |+.++..... ....+.++.||+.||+|++|+|+.+||+++|+.+|.+ +++|++++++.+|.|+|
T Consensus        62 F~~~~~~~~~~~~~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~d  127 (145)
T d2mysb_          62 FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVA  127 (145)
T ss_pred             hhhhhhhcccccchHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCC
Confidence            9998865543 3345679999999999999999999999999999988 99999999999998875

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=4.8e-17  Score=138.31  Aligned_cols=152  Identities=19%  Similarity=0.285  Sum_probs=116.1

Q ss_pred             hcCChhhHHHHHHHhhhhCCC--CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hh
Q 042392          216 EYLPGEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KL  292 (436)
Q Consensus       216 ~~l~~e~~~~l~~~F~~~D~~--~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~  292 (436)
                      ..++++++..+++.|..+|.+  ++|.++.+++..++...+...+ ..++.+|+.+|.+++|.|+|.||+..+.... ..
T Consensus         9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~   87 (183)
T d2zfda1           9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPNA   87 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhccC
Confidence            357899999999999998865  5899999999999887775544 4578999999999999999999999876543 34


Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...+.++.+|+.+|.|++|.|+.+|+...+..+          +...+... .....++.+..+|+.+|.|++|.|+|+|
T Consensus        88 ~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~if~~~D~d~dG~Is~~E  156 (183)
T d2zfda1          88 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT----------LAESGMNL-KDTVIEDIIDKTFEEADTKHDGKIDKEE  156 (183)
T ss_dssp             CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHH----------HHHTTCCC-CHHHHHHHHHHHHHHHCSSCSSEECHHH
T ss_pred             cHHHHHHHhhcccccCCCCCccHHHHHHHHHHH----------Hhhhhccc-chHHHHHHHHHHHHHhCCCCCCeEcHHH
Confidence            556789999999999999999999997653322          11222221 2223344566777778888888888888


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |..++..
T Consensus       157 F~~~~~~  163 (183)
T d2zfda1         157 WRSLVLR  163 (183)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8777654

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=1e-17  Score=142.27  Aligned_cols=61  Identities=10%  Similarity=0.131  Sum_probs=28.9

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                      +.+.+..+|.+++|.|+.+||..++.......+++++..+|+.+|.|++|.|+++||..++
T Consensus        86 ~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~  146 (182)
T d1y1xa_          86 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELS  146 (182)
T ss_dssp             HHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             cccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHH
Confidence            3344444455455555555544444443333344444444555555555555555554444

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=4.1e-18  Score=139.44  Aligned_cols=120  Identities=19%  Similarity=0.258  Sum_probs=98.0

Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc-cccCCCCcccHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ-GDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~g~i~f~EF~~~  376 (436)
                      ++++|..||.|++|+|+..||..++.+              +|     ..++.+++.+++.. .+.+.+|.|+|+||..+
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~--------------lg-----~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~   64 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRA--------------IG-----YNPTNQLVQDIINADSSLRDASSLTLDQITGL   64 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHH--------------TT-----CCCCHHHHHHHHHC--CC--CCEEEHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHH--------------cC-----CchhHHHHhhhhccccccccccccccchhhhh
Confidence            578999999999999999999766433              33     34456689999875 45667899999999998


Q ss_pred             HHhhhc------cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          377 MTDIYK------LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       377 ~~~~~~------~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      +.....      ....+.++.||+.||+|++|+|+.+||+.+|..+|.+ ++++++.|++.+|.|+|
T Consensus        65 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~d  131 (146)
T d1m45a_          65 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSN  131 (146)
T ss_dssp             HHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTT
T ss_pred             hhhhcccccccccchHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCC
Confidence            754321      2345789999999999999999999999999999988 99999999999999876

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.9e-18  Score=139.13  Aligned_cols=120  Identities=16%  Similarity=0.215  Sum_probs=97.1

Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc--CCCCcccHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI--DGNGNIDFIEFV  374 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~g~i~f~EF~  374 (436)
                      +++++|..||++++|.|+..||..++..+                   +..+++.++.+++..++.  +++|.|+|.||.
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~l-------------------g~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~   61 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRAL-------------------GQNPTNAEVLKVLGNPKSDELKSRRVDFETFL   61 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHT-------------------TCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHH
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHh-------------------ccCCCHHHHHHHHHHHhcccccCCceeeeccc
Confidence            37899999999999999999997664333                   344556689999988874  679999999999


Q ss_pred             HHHHhhhccC---CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          375 NLMTDIYKLE---TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       375 ~~~~~~~~~~---~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      .++.......   ..++++.||+.||+|++|+|+.+||+++|+.+|.+ ++++++.|+.. |.|+|
T Consensus        62 ~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~d  126 (139)
T d1w7jb1          62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSN  126 (139)
T ss_dssp             HHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTT
T ss_pred             hhhHhhhhhccccHHHHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCC
Confidence            9887544322   23569999999999999999999999999999988 99999999875 66664

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-18  Score=140.89  Aligned_cols=132  Identities=17%  Similarity=0.239  Sum_probs=107.7

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcC--CCCCcccHHHHHHHHHhhh---hhccHHHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM--DGNGAIDYTEFTAATIQRQ---KLERSEYLSK  300 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~--d~~g~i~~~EF~~~~~~~~---~~~~~~~l~~  300 (436)
                      ++++|..+|.+++|.|+.+||..+++.+|..++..++..++..++.  +++|.|+|.+|...+....   .....+.+++
T Consensus         2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~~   81 (139)
T d1w7jb1           2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLE   81 (139)
T ss_dssp             HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHH
T ss_pred             HHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHHH
Confidence            5789999999999999999999999999999999999999887664  5789999999998875442   2233456899


Q ss_pred             HHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          301 AFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       301 ~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      +|+.+|++++|+|+..||+.++..+                   |..+++.+++.+++. |.|++|.|+|+||+.++
T Consensus        82 aF~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          82 GFRVFDKEGNGKVMGAELRHVLTTL-------------------GEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHTTCTTSSSEEEHHHHHHHHHHS-------------------SSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             hhhhccCCCCCeEeHHHHHHHHHHh-------------------CCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            9999999999999999997653222                   344566788888865 88999999999999865

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=4.9e-17  Score=137.66  Aligned_cols=154  Identities=16%  Similarity=0.197  Sum_probs=111.3

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCC-CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML-TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~-s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      .++..++..+.+.|...  +++|.++.+|+..++..++... +...++.+|+.+|.+++|.|+|.||+..+.........
T Consensus         9 ~ft~~ei~~l~~~F~~~--~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~   86 (178)
T d1s6ca_           9 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH   86 (178)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchH
Confidence            35778888888887554  4679999999999999887554 45556899999999999999999999988766666667


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+.||.|++|+|+..|+...+..+..+....       ..........+..+..+|+.+|.|+||.|+|+||..
T Consensus        87 ~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~  159 (178)
T d1s6ca_          87 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKY-------TYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE  159 (178)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC------------------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccc-------cccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            8899999999999999999999975533322111000       000111222344566777778888888888888877


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      ++..
T Consensus       160 ~i~~  163 (178)
T d1s6ca_         160 SCQE  163 (178)
T ss_dssp             HTTS
T ss_pred             HHHH
Confidence            6653

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-17  Score=137.25  Aligned_cols=116  Identities=15%  Similarity=0.220  Sum_probs=98.5

Q ss_pred             HHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       299 ~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      ...|+.+ .+.||.|+.+||..++.              ..|........+.+.++.+++.+|.|++|.|+|+||+.++.
T Consensus         3 ~~~F~~~-a~~dG~I~~~EL~~~L~--------------~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~   67 (165)
T d1k94a_           3 YTYFSAV-AGQDGEVDAEELQRCLT--------------QSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA   67 (165)
T ss_dssp             HHHHHHH-HGGGTSBCHHHHHHHHH--------------HHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHh-cCCCCCCCHHHHHHHHH--------------HcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhh
Confidence            4566666 68899999999976633              33555545555677899999999999999999999999886


Q ss_pred             hhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCC
Q 042392          379 DIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDH  435 (436)
Q Consensus       379 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~  435 (436)
                      ..      +.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++.|++.+|.|+
T Consensus        68 ~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~~g  119 (165)
T d1k94a_          68 AL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG  119 (165)
T ss_dssp             HH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCBTT
T ss_pred             cc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCCCC
Confidence            54      468999999999999999999999999999988 9999999999999876

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=5.3e-17  Score=140.25  Aligned_cols=159  Identities=22%  Similarity=0.280  Sum_probs=109.8

Q ss_pred             CCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhhhh-hccHHHHHHHHHHhCCCCCCch
Q 042392          236 DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYD  313 (436)
Q Consensus       236 ~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~~~~G~i  313 (436)
                      ...|.++.+++.......  .++..++..+++.| +.+++|.|+++||...+..... .........+|+.+|.|++|.|
T Consensus         3 ~~~~~l~~e~l~~l~~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I   80 (201)
T d1omra_           3 SKSGALSKEILEELQLNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTL   80 (201)
T ss_dssp             TSSCTHHHHHHHHHGGGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEE
T ss_pred             cccCCCCHHHHHHHHHhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeE
Confidence            345677777776665533  47788888888875 5667888888888877655432 3334455778888888888888


Q ss_pred             hhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccC---------
Q 042392          314 EFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLE---------  384 (436)
Q Consensus       314 ~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~---------  384 (436)
                      ++.||..++..+                   .....++.+..+|+.+|.|++|.|+++||..++.......         
T Consensus        81 ~f~EF~~~~~~~-------------------~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~  141 (201)
T d1omra_          81 DFKEYVIALHMT-------------------SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLP  141 (201)
T ss_dssp             EHHHHHHHHHHH-------------------HSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSC
T ss_pred             eehhHHHHHHhh-------------------cccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhh
Confidence            888886542221                   1111223477788888888888888888877765433211         


Q ss_pred             -----CHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          385 -----TPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       385 -----~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                           ..+.+..+|+.+|+|+||.||.+||..++..
T Consensus       142 ~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  177 (201)
T d1omra_         142 EDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA  177 (201)
T ss_dssp             GGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             hhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence                 1234678999999999999999999998764

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=2.7e-17  Score=142.10  Aligned_cols=155  Identities=14%  Similarity=0.139  Sum_probs=119.0

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCC-HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSE  296 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s-~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~  296 (436)
                      ++..++..+.+.|..  .+++|.|+.+|+..++..++.... ...++.+|+.+|.+++|.|+|.||+.++.........+
T Consensus        22 f~~~ei~~l~~~F~~--~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~   99 (201)
T d1omra_          22 FTEEELSSWYQSFLK--ECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ   99 (201)
T ss_dssp             SCHHHHHHHHHHHHH--HCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCGGG
T ss_pred             CCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHH
Confidence            578888888888854  457899999999999999876544 55568999999999999999999999887766666677


Q ss_pred             HHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHH
Q 042392          297 YLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL  376 (436)
Q Consensus       297 ~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~  376 (436)
                      .++.+|+.||.|++|.|+..|+...+..+........     ...........+..++.+|+.+|.|+||.|+|+||+..
T Consensus       100 ~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~  174 (201)
T d1omra_         100 KLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED-----TKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEG  174 (201)
T ss_dssp             SHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHH-----HTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhh-----hhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence            8999999999999999999999766443322111100     00011122234557899999999999999999999987


Q ss_pred             HHh
Q 042392          377 MTD  379 (436)
Q Consensus       377 ~~~  379 (436)
                      +..
T Consensus       175 ~~~  177 (201)
T d1omra_         175 TLA  177 (201)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=5.2e-17  Score=137.86  Aligned_cols=154  Identities=21%  Similarity=0.267  Sum_probs=119.0

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCC-HHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS  295 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s-~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~  295 (436)
                      .++.+++..+...|...  +++|.++..|+..++..++...+ ...++.+|..+|.+++|.|+|.||+.++.........
T Consensus        17 ~fs~~ei~~l~~~F~~~--~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~   94 (181)
T d1bjfa_          17 DFTEHEIQEWYKGFLRD--CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE   94 (181)
T ss_dssp             SCCHHHHHHHHHHHHHH--STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHH
T ss_pred             CCCHHHHHHHHHHHHhh--CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchH
Confidence            36788888888888554  57899999999999998875554 4567899999999999999999999998887777778


Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++.+|+.+|.|++|+|+..|+..++..+-..      .....++. .+...+++.++++|+.+|.|+||.|+|+||+.
T Consensus        95 ~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~  167 (181)
T d1bjfa_          95 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKM------VSSVMKMP-EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR  167 (181)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTT------CCCTTTSC-GGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH
T ss_pred             HHHHHHHHHhccCCCCeecHHHHHHHHHHHhhh------ccccccCC-cccccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            889999999999999999999997664333111      11111111 13345666788888888888888888888888


Q ss_pred             HHHh
Q 042392          376 LMTD  379 (436)
Q Consensus       376 ~~~~  379 (436)
                      ++..
T Consensus       168 ~~~~  171 (181)
T d1bjfa_         168 GAKS  171 (181)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7754

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.69  E-value=1.5e-17  Score=137.63  Aligned_cols=126  Identities=24%  Similarity=0.393  Sum_probs=95.5

Q ss_pred             hccHHHHHHHHHHhCCCC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          292 LERSEYLSKAFQYFDKDN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .++.++++++|+.||.++ ||.|+..||..+++.              +|     ..+++.++.+++..++.+++|.+++
T Consensus        10 ~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~--------------lg-----~~~~~~~~~~~~~~~~~~~~~~~~~   70 (156)
T d1dtla_          10 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM--------------LG-----QNPTPEELQEMIDEVDEDGSGTVDF   70 (156)
T ss_dssp             HHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH--------------TT-----CCCCHHHHHHHHHHHCTTSSSSBCH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHH--------------cC-----CCCCHHHHHHHHHHhhccCCCccch
Confidence            345667888899999885 799888888665332              23     3345567888888888899999999


Q ss_pred             HHHHHHHHhhhc----cCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYK----LETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~----~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ++|...+.....    ....+.++.||+.||+|++|+|+.+||++++..+|.+ ++++++++|+.+|.|+|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~d  141 (156)
T d1dtla_          71 DEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND  141 (156)
T ss_dssp             HHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSS
T ss_pred             hhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCC
Confidence            998875544322    2334668889999999999999999999998888888 88999999999888875

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.69  E-value=5.8e-17  Score=130.37  Aligned_cols=132  Identities=22%  Similarity=0.306  Sum_probs=103.3

Q ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCC
Q 042392          262 VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGL  341 (436)
Q Consensus       262 i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~  341 (436)
                      .+.+|+.+|.|++|.|++.||..++.........+.+..+|+.+|.+++|.|++.||...+...                
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~----------------   65 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI----------------   65 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCS----------------
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccc----------------
Confidence            4678999999999999999998888766555666788999999999999999999986542221                


Q ss_pred             CCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          342 GNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                      ...........+..+++.+|.|++|.|+.+||..++...    ..+.+...|+.+|+|+||+||.+||.++|
T Consensus        66 ~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~----~~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKH----GIEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             SCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTT----TCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccccccccccccccccccCCcccHHHHHHHHHhc----CcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            011112234467888999999999999999999887643    34578888999999999999999998876

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=2e-16  Score=133.96  Aligned_cols=152  Identities=13%  Similarity=0.146  Sum_probs=127.1

Q ss_pred             CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          255 SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       255 ~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      .-+..+++..+|+.+|.|++|.|+..||...+.... .....+.++.+|+.+|.+++|.|++.||...+..         
T Consensus        14 ~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~---------   84 (181)
T d1hqva_          14 ALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY---------   84 (181)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH---------
T ss_pred             CCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh---------
Confidence            346678899999999999999999999998875443 2346678999999999999999999999654211         


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHH
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAF  413 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l  413 (436)
                                      ...+..+++.+|.+++|.|+.+||..++.......+.+++..+++.+|.+++|.|+++||..++
T Consensus        85 ----------------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~  148 (181)
T d1hqva_          85 ----------------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGC  148 (181)
T ss_dssp             ----------------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHH
T ss_pred             ----------------ccccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence                            1246788889999999999999999999887777788999999999999999999999999887


Q ss_pred             HhCCCCChHHHHHHHHhhccCCC
Q 042392          414 KENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       414 ~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ..     -+.+..+++..|.|+|
T Consensus       149 ~~-----l~~l~~~F~~~D~~~d  166 (181)
T d1hqva_         149 IV-----LQRLTDIFRRYDTDQD  166 (181)
T ss_dssp             HH-----HHHHHHHHHHHCTTCS
T ss_pred             HH-----HHHHHHHHHHhCCCCC
Confidence            53     3457788888888765

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=8.4e-17  Score=137.60  Aligned_cols=155  Identities=23%  Similarity=0.327  Sum_probs=121.4

Q ss_pred             ccCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhhh-hhccHHHHHHHHHHhCCCCCCchhhhh
Q 042392          240 TLSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQ-KLERSEYLSKAFQYFDKDNSGYDEFRA  317 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~e  317 (436)
                      .++.+++....+.  ..++..++..+++.+ +.+++|.++..||...+.... .........++|+.+|.+++|.|++.|
T Consensus         7 ~l~~e~l~~l~~~--t~fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~E   84 (190)
T d1fpwa_           7 KLSKDDLTCLKQS--TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEE   84 (190)
T ss_dssp             CSTTHHHHHHTTT--CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHH
T ss_pred             CCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHH
Confidence            4777777775443  358899999999987 567899999999998876543 233445578999999999999999999


Q ss_pred             hhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhcc-----------C-C
Q 042392          318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL-----------E-T  385 (436)
Q Consensus       318 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~-----------~-~  385 (436)
                      |..++..+                   .....++.+..+|+.+|.|++|.|+++||..++......           . .
T Consensus        85 f~~~~~~~-------------------~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~  145 (190)
T d1fpwa_          85 FITVLSTT-------------------SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATP  145 (190)
T ss_dssp             HHHHHHHH-------------------SCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCH
T ss_pred             HHHHHHHH-------------------ccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhH
Confidence            97653222                   112234579999999999999999999999988654321           1 1


Q ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          386 PELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       386 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ++.++.+|+.+|+|+||.||.+||++++..
T Consensus       146 ~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  175 (190)
T d1fpwa_         146 EMRVKKIFKLMDKNEDGYITLDEFREGSKV  175 (190)
T ss_dssp             HHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            256889999999999999999999999875

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.68  E-value=7.4e-17  Score=137.86  Aligned_cols=141  Identities=22%  Similarity=0.295  Sum_probs=111.9

Q ss_pred             CCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhh
Q 042392          256 MLTEFDVKQLMEAADMD-GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD  334 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~  334 (436)
                      ..+..+++++++.+..+ ++|.|+..||...+...........+.++|+.+|.|++|.|++.||..++..+         
T Consensus        17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~---------   87 (189)
T d1jbaa_          17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLV---------   87 (189)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH---------
T ss_pred             ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhh---------
Confidence            45667899999998766 69999999999888655555667789999999999999999999997653222         


Q ss_pred             hhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc----------------cCC-HHHHHHHHHhhc
Q 042392          335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK----------------LET-PELLEKAFQYLD  397 (436)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~----------------~~~-~~~~~~~F~~~D  397 (436)
                                .....++.+..+|+.+|.|++|.|+++||..++.....                ... .+.++.+|+.+|
T Consensus        88 ----------~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D  157 (189)
T d1jbaa_          88 ----------LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVD  157 (189)
T ss_dssp             ----------SSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHC
T ss_pred             ----------cccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhC
Confidence                      11122346888999999999999999999987754321                011 245789999999


Q ss_pred             cCCCCcccHHHHHHHHHh
Q 042392          398 KNSDQFITVNELETAFKE  415 (436)
Q Consensus       398 ~d~~G~I~~~el~~~l~~  415 (436)
                      +|+||.||.+||..++..
T Consensus       158 ~d~dG~Is~~EF~~~~~~  175 (189)
T d1jbaa_         158 ENGDGQLSLNEFVEGARR  175 (189)
T ss_dssp             CSCCSCBCHHHHHHHHTT
T ss_pred             CCCCCcEeHHHHHHHHHh
Confidence            999999999999999974

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.7e-16  Score=132.01  Aligned_cols=156  Identities=21%  Similarity=0.287  Sum_probs=121.3

Q ss_pred             CccCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhhhhhc-cHHHHHHHHHHhCCCCCCchhhh
Q 042392          239 GTLSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQKLE-RSEYLSKAFQYFDKDNSGYDEFR  316 (436)
Q Consensus       239 g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~~~~-~~~~l~~~F~~~D~~~~G~i~~~  316 (436)
                      -.++++++....+..  .++..++..+++.+ +.+++|.++..+|...+....... .......+|+.+|.+++|.|++.
T Consensus         3 skl~~e~i~~l~~~t--~fs~~Ei~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~   80 (187)
T d1g8ia_           3 SKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFS   80 (187)
T ss_dssp             CSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             ccCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHH
Confidence            456777777766644  47899999999987 557899999999998876554333 33445789999999999999999


Q ss_pred             hhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc------------cC
Q 042392          317 AMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK------------LE  384 (436)
Q Consensus       317 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~------------~~  384 (436)
                      ||..++..+                   .....++.+..+|+.+|.|++|.|+.+||..++.....            ..
T Consensus        81 EF~~~l~~~-------------------~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~  141 (187)
T d1g8ia_          81 EFIQALSVT-------------------SRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT  141 (187)
T ss_dssp             HHHHHHHHH-------------------HHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred             HHHHHHHHh-------------------ccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence            997663332                   11223457899999999999999999999988764321            11


Q ss_pred             CHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          385 TPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       385 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ..+.+..+|+.+|.|+||.||.+||.+++..
T Consensus       142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  172 (187)
T d1g8ia_         142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKA  172 (187)
T ss_dssp             HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            1245889999999999999999999999874

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.66  E-value=1.9e-16  Score=121.33  Aligned_cols=102  Identities=23%  Similarity=0.297  Sum_probs=82.5

Q ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhh
Q 042392          257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA  336 (436)
Q Consensus       257 ~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~  336 (436)
                      ++.++|..++..++  ++|.|+|.||+..+...  ......++++|+.||+|++|+|+..||+.++..+           
T Consensus         6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l-----------   70 (109)
T d1pvaa_           6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSF-----------   70 (109)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT-----------
T ss_pred             CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHh-----------
Confidence            57888998888764  56789999999876533  3345679999999999999999999997764332           


Q ss_pred             hhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                           ...+..++++++.++++.+|.|+||.|+|+||+.+|.
T Consensus        71 -----~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~  107 (109)
T d1pvaa_          71 -----AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  107 (109)
T ss_dssp             -----CTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             -----hhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHH
Confidence                 1224456777899999999999999999999999875

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.66  E-value=2.1e-17  Score=140.31  Aligned_cols=123  Identities=32%  Similarity=0.509  Sum_probs=96.7

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      +..+++++|+.+|.|++|+|+..||..++..+                   +..++..++..+++.+|.+++|.|+|++|
T Consensus         8 ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l-------------------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef   68 (182)
T d1s6ia_           8 EIGGLKELFKMIDTDNSGTITFDELKDGLKRV-------------------GSELMESEIKDLMDAADIDKSGTIDYGEF   68 (182)
T ss_dssp             TTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTT-------------------TCCCCHHHHHHHHHHTCTTCSSEECHHHH
T ss_pred             HHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHc-------------------CCccccccchhhhhhhhccccccchHHHH
Confidence            34568889999999999998888886653222                   33445667888899999999999999999


Q ss_pred             HHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      +.++.........+.++.+|+.+|.+++|+|+.+||++++..+|. ++++++.|++.+|.|+|
T Consensus        69 ~~~~~~~~~~~~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl-~~~ev~~~f~~~D~d~D  130 (182)
T d1s6ia_          69 IAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDND  130 (182)
T ss_dssp             HHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSS
T ss_pred             HHHHHhhcccccHHHHHHHHHHHhhcCCCccchhhhhhhhhhcCc-cHHHHHHHHHHhhcCCC
Confidence            887766555445567888999999999999999999988887653 77888889999988876

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.6e-17  Score=134.92  Aligned_cols=121  Identities=16%  Similarity=0.196  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .+.++..|+.++ ++||.|+..||..+              ++++|+......++.+.+..+++.+|.|++|.|+|+||+
T Consensus         6 ~~~~~~~F~~~~-~~dG~Is~~EL~~~--------------L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~   70 (172)
T d1juoa_           6 QDPLYGYFAAVA-GQDGQIDADELQRC--------------LTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK   70 (172)
T ss_dssp             CCTTHHHHHHHH-TTTTEECHHHHHHH--------------HHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCCCHHHHHHH--------------HHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHH
Confidence            345889999996 88999999999765              344466665666677889999999999999999999999


Q ss_pred             HHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          375 NLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      .++...      .....+|+.||+|++|+|+.+|++.+|..+|.. ++++++.+++++|.+++
T Consensus        71 ~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~~g~  127 (172)
T d1juoa_          71 ELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK  127 (172)
T ss_dssp             HHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCSSSS
T ss_pred             HHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            988653      358899999999999999999999999999988 99999999999988763

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.65  E-value=1.5e-16  Score=121.83  Aligned_cols=104  Identities=23%  Similarity=0.311  Sum_probs=83.3

Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhh
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK  335 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~  335 (436)
                      -++.++|.+++..++  .+|.|+|.||+..+..  ...+.+.++++|+.||+|++|+|+.+||+.++..+          
T Consensus         5 ~l~~~di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l----------   70 (109)
T d5pala_           5 VLKADDINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF----------   70 (109)
T ss_dssp             TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH----------
T ss_pred             HccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHh----------
Confidence            467888999888875  4578999999977643  23456789999999999999999999997653322          


Q ss_pred             hhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                            ...+..+++++++++++.+|.|+||.|+|+||+.+|..
T Consensus        71 ------~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          71 ------SAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             ------CTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             ------hhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence                  11244567778999999999999999999999998863

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.65  E-value=7.2e-16  Score=130.68  Aligned_cols=155  Identities=22%  Similarity=0.303  Sum_probs=121.9

Q ss_pred             ccCHHHHHHHHHhcCCCCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhhhhhc-cHHHHHHHHHHhCCCCCCchhhhh
Q 042392          240 TLSYDELRAGLTKVGSMLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQKLE-RSEYLSKAFQYFDKDNSGYDEFRA  317 (436)
Q Consensus       240 ~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~~~~-~~~~l~~~F~~~D~~~~G~i~~~e  317 (436)
                      .++++++....+..+  ++.+++..+++.+ +.+++|.|+..||...+....... ......++|+.+|++++|.|++.|
T Consensus         3 ~l~~~~~~~L~~~t~--fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~e   80 (181)
T d1bjfa_           3 KLRPEVMQDLLESTD--FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFRE   80 (181)
T ss_dssp             CCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHH
T ss_pred             CCCHHHHHHHHHhcC--CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHH
Confidence            567777777766544  7899999999985 457999999999999886654333 344568999999999999999999


Q ss_pred             hhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc------------cCC
Q 042392          318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK------------LET  385 (436)
Q Consensus       318 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~------------~~~  385 (436)
                      |..++...                   .....++.+..+++.+|.|++|.|+.+||..++.....            ...
T Consensus        81 Fl~~~~~~-------------------~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~  141 (181)
T d1bjfa_          81 FIIALSVT-------------------SRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTP  141 (181)
T ss_dssp             HHHHHHHH-------------------TSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSH
T ss_pred             HHHHHHHH-------------------hhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccH
Confidence            97653222                   11123456889999999999999999999998876432            122


Q ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          386 PELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       386 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      .+.++.+|+.+|.|+||.||.+||++++..
T Consensus       142 ~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  171 (181)
T d1bjfa_         142 EKRTEKIFRQMDTNRDGKLSLEEFIRGAKS  171 (181)
T ss_dssp             HHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            356889999999999999999999999875

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=5.1e-16  Score=131.27  Aligned_cols=141  Identities=21%  Similarity=0.306  Sum_probs=111.0

Q ss_pred             CCCHHHHHHHHHHH-cCCCCCcccHHHHHHHHHhhhhh-ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          256 MLTEFDVKQLMEAA-DMDGNGAIDYTEFTAATIQRQKL-ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       256 ~~s~~~i~~l~~~~-d~d~~g~i~~~EF~~~~~~~~~~-~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      .++..++..+++.+ +.+++|.|+.+||...+...... .....+.++|+.+|+|++|.|++.||..++..+        
T Consensus         9 ~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~--------   80 (178)
T d1s6ca_           9 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL--------   80 (178)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--------
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHH--------
Confidence            57999999999987 67889999999999887655333 344556899999999999999999997653222        


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhcc------------CCHHHHHHHHHhhccCCC
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL------------ETPELLEKAFQYLDKNSD  401 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~------------~~~~~~~~~F~~~D~d~~  401 (436)
                                 .....++.+..+++.+|.|++|.|+++||..++......            ...+.+..+|+.+|+|+|
T Consensus        81 -----------~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~D  149 (178)
T d1s6ca_          81 -----------LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD  149 (178)
T ss_dssp             -----------HHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCS
T ss_pred             -----------hccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCC
Confidence                       122234578899999999999999999998876543221            112346789999999999


Q ss_pred             CcccHHHHHHHHHh
Q 042392          402 QFITVNELETAFKE  415 (436)
Q Consensus       402 G~I~~~el~~~l~~  415 (436)
                      |.||.+||.+++..
T Consensus       150 G~Is~~EF~~~i~~  163 (178)
T d1s6ca_         150 GIVTLDEFLESCQE  163 (178)
T ss_dssp             SEECHHHHHHHTTS
T ss_pred             CcEeHHHHHHHHHH
Confidence            99999999998864

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2e-16  Score=132.02  Aligned_cols=123  Identities=24%  Similarity=0.342  Sum_probs=97.9

Q ss_pred             hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          291 KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       291 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ..++...++++|+.+|+|++|+|+..||...+...               .        ...+.+++..+|.+++|.|+|
T Consensus        11 t~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~---------------~--------~~~~~~l~~~~d~~~~g~i~~   67 (165)
T d1auib_          11 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQ---------------Q--------NPLVQRVIDIFDTDGNGEVDF   67 (165)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHH---------------T--------CTTHHHHHHHHCTTCSSSEEH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhcc---------------C--------CHHHHHHHHHHccccchhhhh
Confidence            34556789999999999999999999996542110               0        013678899999999999999


Q ss_pred             HHHHHHHHhhhccCC-HHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC-----ChHHHHHHHHhhccCCC
Q 042392          371 IEFVNLMTDIYKLET-PELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG-----DDATIKEIISEVGRDHK  436 (436)
Q Consensus       371 ~EF~~~~~~~~~~~~-~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~-----~~~e~~~~~~~~d~~~d  436 (436)
                      +||+.++........ .+.++.+|+.||.|++|+||.+||+++++.. +..     .++.++.+++++|.|+|
T Consensus        68 ~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~d  140 (165)
T d1auib_          68 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGD  140 (165)
T ss_dssp             HHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSS
T ss_pred             hhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCC
Confidence            999999887655443 4569999999999999999999999998663 222     35567889999999876

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.7e-15  Score=127.82  Aligned_cols=158  Identities=13%  Similarity=0.224  Sum_probs=109.4

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCc--------cCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCC-CCCcccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGT--------LSYDELRAGLTKVGSMLTEFDVKQLMEAADMD-GNGAIDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~--------i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d-~~g~i~~~EF~~~~~  287 (436)
                      .++++++..+.+.|..++.+..|.        ++.+++..... +...+   -++++|+.+|.+ ++|.|+|.||+..+.
T Consensus        10 ~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~-l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l~   85 (180)
T d1xo5a_          10 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-LKANP---FKERICRVFSTSPAKDSLSFEDFLDLLS   85 (180)
T ss_dssp             CSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH-HHTCT---THHHHHHHHCCSTTCCEECHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc-cccCh---HHHHHHHhccCCCCCCcCcHHHHHHHHH
Confidence            457889999999999988777665        45555544222 21111   267899999987 689999999999886


Q ss_pred             hhh-hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCC
Q 042392          288 QRQ-KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       288 ~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      ... .....+.++.+|+.||.|++|+|+..|+...+..+-..       .....+   .....++.+..+++.+|.|+||
T Consensus        86 ~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-------~~~~~~---~~~~~~~~v~~~~~~~D~d~dG  155 (180)
T d1xo5a_          86 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGE-------GEDTRL---SASEMKQLIDNILEESDIDRDG  155 (180)
T ss_dssp             HHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC-------------CC---CCTTHHHHHHHHHHHHCTTCSS
T ss_pred             HHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhc-------cccccc---cHHHHHHHHHHHHHHhCCCCCC
Confidence            653 44567789999999999999999999997653332000       000011   1112234577788889999999


Q ss_pred             cccHHHHHHHHHhhhccCCHHHHHHHHH
Q 042392          367 NIDFIEFVNLMTDIYKLETPELLEKAFQ  394 (436)
Q Consensus       367 ~i~f~EF~~~~~~~~~~~~~~~~~~~F~  394 (436)
                      .|+|+||..++....      ++..+|+
T Consensus       156 ~Is~~EF~~~~~~~P------~~~~~f~  177 (180)
T d1xo5a_         156 TINLSEFQHVISRSP------DFASSFK  177 (180)
T ss_dssp             SBCHHHHHHHHHHCH------HHHHHHH
T ss_pred             cCcHHHHHHHHHhCH------HHHhhCe
Confidence            999999998887432      4555554

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.60  E-value=2.1e-15  Score=115.02  Aligned_cols=103  Identities=24%  Similarity=0.281  Sum_probs=84.0

Q ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhh
Q 042392          256 MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK  335 (436)
Q Consensus       256 ~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~  335 (436)
                      .++.++|..+++..+.+  |.|+|.||+..+..  .....++++.+|+.||+|++|+|+..||...+..+          
T Consensus         4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l----------   69 (107)
T d2pvba_           4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF----------   69 (107)
T ss_dssp             TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT----------
T ss_pred             CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhc--ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHh----------
Confidence            47889999999988655  56999999987653  34466789999999999999999999998764332          


Q ss_pred             hhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          336 AKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                          +  ..+..++++++.++++.+|.|+||.|+|+||+.+|.
T Consensus        70 ----~--~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          70 ----S--PSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             ----C--TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             ----h--cccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence                1  223456777899999999999999999999998875

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.59  E-value=5e-15  Score=126.30  Aligned_cols=141  Identities=18%  Similarity=0.183  Sum_probs=84.2

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHH-----hcCCCCCHHHHHHHHH-----HHcCCCCCcccHHHHHHHHHh
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLT-----KVGSMLTEFDVKQLME-----AADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~-----~~~~~~s~~~i~~l~~-----~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .++.+.+++.+|..+|.+++|.|+.+||..++.     .++..++..+...++.     ..+...++.+++.||+..+..
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~   88 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ   88 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence            467788899999999999999999999987543     4566666666544333     345667888999999887643


Q ss_pred             hhhh-----------ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHH
Q 042392          289 RQKL-----------ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV  357 (436)
Q Consensus       289 ~~~~-----------~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (436)
                      ....           .....+..+|+.+|+|++|+|+..||..++..+                   +..++++++..+|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~-------------------g~~~~~~~~~~lf  149 (189)
T d1qv0a_          89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-------------------GISPSQEDCEATF  149 (189)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH-------------------SSCCCHHHHHHHH
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhc-------------------CCCCCHHHHHHHH
Confidence            3211           011234455666666666665555554432111                   2223334555555


Q ss_pred             HccccCCCCcccHHHHHHHHH
Q 042392          358 LQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       358 ~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +.+|.|+||.|+|+||+.++.
T Consensus       150 ~~~D~d~dG~Is~~EF~~~~~  170 (189)
T d1qv0a_         150 RHCDLDNAGDLDVDEMTRQHL  170 (189)
T ss_dssp             HHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHhCCCCCCcEeHHHHHHHHH
Confidence            555555556666666555443

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.57  E-value=7.8e-15  Score=124.81  Aligned_cols=142  Identities=17%  Similarity=0.148  Sum_probs=96.3

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHh-----cCCCCCHHHHHHHHHH-----HcCCCCCcccHHHHHHHHHh
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKQLMEA-----ADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~-----~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +|..+.+++.+|..+|.+++|.|+.+||..++..     ++..++..++...+..     .....++.+++.+|+..+..
T Consensus         7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK   86 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence            4566789999999999999999999999876554     4556666554444433     33456678999999877543


Q ss_pred             hhhhc-----------cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHH
Q 042392          289 RQKLE-----------RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV  357 (436)
Q Consensus       289 ~~~~~-----------~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (436)
                      .....           ....++.+|+.+|+|++|+|+.+||..++..+                   +..++.+++..++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-------------------g~~~~~~~~~~lf  147 (187)
T d1uhka1          87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA-------------------GIIQSSEDCEETF  147 (187)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-------------------TSCCSHHHHHHHH
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHh-------------------CCCccHHHHHHHH
Confidence            32111           12346777888888888887777776543222                   2233455677777


Q ss_pred             HccccCCCCcccHHHHHHHHHh
Q 042392          358 LQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       358 ~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                      +.+|.|++|.|+|+||+.++..
T Consensus       148 ~~~D~d~dG~Is~~EF~~~~~~  169 (187)
T d1uhka1         148 RVCDIDESGQLDVDEMTRQHLG  169 (187)
T ss_dssp             HHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHhCCCCCCCEeHHHHHHHHHH
Confidence            7777777777777777765543

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.56  E-value=5.4e-15  Score=113.08  Aligned_cols=85  Identities=24%  Similarity=0.341  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-ChHH
Q 042392          348 RAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-DDAT  423 (436)
Q Consensus       348 ~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~~~e  423 (436)
                      ++.+++.+++..++.  +|.|+|+||+.++..  ...++++++.+|+.||+|++|+|+.+||+++|..+   |.. ++++
T Consensus         6 l~~~di~~~~~~~~~--~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e   81 (109)
T d5pala_           6 LKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTE   81 (109)
T ss_dssp             SCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred             ccHHHHHHHHHhcCC--CCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHH
Confidence            345678899888764  689999999988753  23457889999999999999999999999999765   566 8999


Q ss_pred             HHHHHHhhccCCC
Q 042392          424 IKEIISEVGRDHK  436 (436)
Q Consensus       424 ~~~~~~~~d~~~d  436 (436)
                      +++|++++|.|+|
T Consensus        82 ~~~~~~~~D~d~d   94 (109)
T d5pala_          82 TKALLAAGDSDHD   94 (109)
T ss_dssp             HHHHHHHHCTTCS
T ss_pred             HHHHHHHhCCCCC
Confidence            9999999999986

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.56  E-value=1.1e-14  Score=123.69  Aligned_cols=145  Identities=11%  Similarity=0.085  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhhh--------hhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQRQ--------KLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~--------~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      +.++.+|..++ +++|.|+..|+...+....        ..-..+.+..+++.+|.|++|.|++.||......       
T Consensus        18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~-------   89 (186)
T d1df0a1          18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK-------   89 (186)
T ss_dssp             HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh-------
Confidence            45788999998 8999999999988775331        1224567899999999999999999999643111       


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET  411 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~  411 (436)
                                        ...+..+|+.+|+|++|.|+.+|+..++.......++ ++..+|..+|.|++|.|+++||.+
T Consensus        90 ------------------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~-~~~~~~~~~d~d~dg~I~f~eFi~  150 (186)
T d1df0a1          90 ------------------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVR  150 (186)
T ss_dssp             ------------------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCH-HHHHHHHHHHCCSTTEECHHHHHH
T ss_pred             ------------------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccH-HHHHHHHHHHcCCCCeEeHHHHHH
Confidence                              1257889999999999999999999999876655554 466788889999999999999999


Q ss_pred             HHHhCCCCChHHHHHHHHhhccCCC
Q 042392          412 AFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       412 ~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ++..     .+++..+++..|.|++
T Consensus       151 ~~~~-----l~~~~~~F~~~D~~~~  170 (186)
T d1df0a1         151 CLVR-----LEILFKIFKQLDPENT  170 (186)
T ss_dssp             HHHH-----HHHHHHHHHHHCTTCC
T ss_pred             HHHH-----HHHHHHHHHHhCCCCC
Confidence            8874     3578889999999875

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.56  E-value=5.1e-15  Score=125.73  Aligned_cols=142  Identities=15%  Similarity=0.199  Sum_probs=106.0

Q ss_pred             CChhhHHHHHHHhhh-hCCCCCCccCHHHHHHHHHhcCC----CCCH-----------HHHHHHHHHHcCCCCCcccHHH
Q 042392          218 LPGEETQALKEKFIE-MDTDKNGTLSYDELRAGLTKVGS----MLTE-----------FDVKQLMEAADMDGNGAIDYTE  281 (436)
Q Consensus       218 l~~e~~~~l~~~F~~-~D~~~~g~i~~~eL~~~l~~~~~----~~s~-----------~~i~~l~~~~d~d~~g~i~~~E  281 (436)
                      +++.+...++.+|.. +|.+++|.|+.+|+..++..++.    ....           .....++...+.+++|.|++.+
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            466788899999997 59999999999999998876531    1111           1124456667899999999999


Q ss_pred             HHHHHHhhhh---------hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHH
Q 042392          282 FTAATIQRQK---------LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM  352 (436)
Q Consensus       282 F~~~~~~~~~---------~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (436)
                      |...+.....         ......+..+|+.+|.|++|+|+..||..++.              .+|++       .++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~--------------~~~l~-------~~~  140 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCK--------------NFQLQ-------CAD  140 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTT--------------SSCCC-------CSS
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHH--------------HcCCC-------HHH
Confidence            9988754321         11234578999999999999999999876532              23443       235


Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDI  380 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~  380 (436)
                      +..++..+|.|++|.|+|+||..++...
T Consensus       141 ~~~~f~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         141 VPAVYNVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence            8889999999999999999999877654

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.55  E-value=1.3e-15  Score=129.17  Aligned_cols=122  Identities=16%  Similarity=0.175  Sum_probs=85.2

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      +.++++|+.+| +++|.|+..||..++..+-.-.       ..    .....++.+.++.++..+|.|++|.|+|+||..
T Consensus        20 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~-------~~----~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~   87 (188)
T d1qxpa2          20 DNFKTLFSKLA-GDDMEISVKELQTILNRIISKH-------KD----LRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNI   87 (188)
T ss_dssp             -------CCCC-CSSSSCCCSCTTTTTCC--------------------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHH
T ss_pred             HHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccc-------cc----cccccCCHHHHHHHHHHhcCCCCCcccHHHHHH
Confidence            35889999999 5589999999987754431100       00    011224556799999999999999999999999


Q ss_pred             HHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          376 LMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       376 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ++...      +.++.+|+.||+|++|+|+.+||+.+|..+|.. +++.++.|+.. |.|+|
T Consensus        88 l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~d  142 (188)
T d1qxpa2          88 LWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDE  142 (188)
T ss_dssp             HHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSS
T ss_pred             HHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCC
Confidence            88654      368999999999999999999999999999987 77666666655 44543

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.55  E-value=6.1e-15  Score=112.75  Aligned_cols=84  Identities=20%  Similarity=0.292  Sum_probs=71.7

Q ss_pred             hHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC---CCC-ChHHH
Q 042392          349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN---NMG-DDATI  424 (436)
Q Consensus       349 ~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~---~~~-~~~e~  424 (436)
                      +.+++.+++..+|  ++|.|+|+||+.++...  ...++.++.+|+.||+|++|+|+.+||+.+|..+   |.. +++++
T Consensus         7 ~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev   82 (109)
T d1pvaa_           7 KADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAET   82 (109)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHH
T ss_pred             CHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHH
Confidence            4567888888775  56889999999987643  2456789999999999999999999999999876   555 89999


Q ss_pred             HHHHHhhccCCC
Q 042392          425 KEIISEVGRDHK  436 (436)
Q Consensus       425 ~~~~~~~d~~~d  436 (436)
                      +.|++.+|.|+|
T Consensus        83 ~~~~~~~D~d~d   94 (109)
T d1pvaa_          83 KAFLKAADKDGD   94 (109)
T ss_dssp             HHHHHHHCTTCS
T ss_pred             HHHHHHHCCCCc
Confidence            999999999986

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=2.7e-14  Score=120.92  Aligned_cols=142  Identities=17%  Similarity=0.244  Sum_probs=106.2

Q ss_pred             CCCCHHHHHHHHHHH---cCC--CCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHH
Q 042392          255 SMLTEFDVKQLMEAA---DMD--GNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVS  329 (436)
Q Consensus       255 ~~~s~~~i~~l~~~~---d~d--~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~  329 (436)
                      ..++.+++..+++.+   |.+  ++|.|+.+||...+...... .......+|+.+|.|++|.|++.||..++..+    
T Consensus         9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~----   83 (183)
T d2zfda1           9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGFEEFARALSVF----   83 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSC-CCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHT----
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCC-CCHHHHHHHHHHccCCCCcCcHHHHHHHHHhh----
Confidence            357888877776665   444  68999999998776543322 23457899999999999999999996542211    


Q ss_pred             HHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc----cCCH----HHHHHHHHhhccCCC
Q 042392          330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK----LETP----ELLEKAFQYLDKNSD  401 (436)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~----~~~~----~~~~~~F~~~D~d~~  401 (436)
                                 .   .....++.+..+|+.+|.|++|.|+.+|+..++.....    ...+    +.+..+|+.+|+|+|
T Consensus        84 -----------~---~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~d  149 (183)
T d2zfda1          84 -----------H---PNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD  149 (183)
T ss_dssp             -----------S---TTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred             -----------h---ccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCC
Confidence                       0   01123446888999999999999999999998765422    2222    236789999999999


Q ss_pred             CcccHHHHHHHHHh
Q 042392          402 QFITVNELETAFKE  415 (436)
Q Consensus       402 G~I~~~el~~~l~~  415 (436)
                      |.|+.+||++++..
T Consensus       150 G~Is~~EF~~~~~~  163 (183)
T d2zfda1         150 GKIDKEEWRSLVLR  163 (183)
T ss_dssp             SEECHHHHHHHHHH
T ss_pred             CeEcHHHHHHHHHH
Confidence            99999999999875

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.54  E-value=2e-14  Score=120.73  Aligned_cols=139  Identities=18%  Similarity=0.147  Sum_probs=101.7

Q ss_pred             hhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC----CCCCH-HH----HHHHHHH--HcCCCCCcccHHHHHHHHHhh
Q 042392          221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG----SMLTE-FD----VKQLMEA--ADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       221 e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~----~~~s~-~~----i~~l~~~--~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      ....+++.+|..+|.+++|.|+.+||..++..++    ..... ..    ....+..  .+.++++.|+++||+..+...
T Consensus         3 ~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~   82 (174)
T d2scpa_           3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEM   82 (174)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhh
Confidence            4567899999999999999999999998887642    12211 11    1222222  267788999999999887654


Q ss_pred             hh-----hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCC
Q 042392          290 QK-----LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDG  364 (436)
Q Consensus       290 ~~-----~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  364 (436)
                      ..     ......++.+|+.+|+|++|+|+..||..++              ..+++.       ..++..+|+.+|.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l--------------~~~~~~-------~~~~~~~f~~~D~d~  141 (174)
T d2scpa_          83 VKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF--------------GMLGLD-------KTMAPASFDAIDTNN  141 (174)
T ss_dssp             TSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHH--------------HHTTCC-------GGGHHHHHHHHCTTC
T ss_pred             hcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHH--------------HHHhhh-------hHHHHHHHhhcCCCC
Confidence            22     1223457899999999999999999996542              222332       235888999999999


Q ss_pred             CCcccHHHHHHHHHhh
Q 042392          365 NGNIDFIEFVNLMTDI  380 (436)
Q Consensus       365 ~g~i~f~EF~~~~~~~  380 (436)
                      ||.|+++||+.++...
T Consensus       142 dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_         142 DGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             SSEECHHHHHHHHHHH
T ss_pred             CCcEeHHHHHHHHHHH
Confidence            9999999999877654

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.54  E-value=8.6e-15  Score=112.23  Aligned_cols=103  Identities=24%  Similarity=0.346  Sum_probs=81.7

Q ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhh
Q 042392          257 LTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA  336 (436)
Q Consensus       257 ~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~  336 (436)
                      ++.+++..++..++.  +|.|+|.||+..+...  ..+...++.+|+.||+|++|+|+..||..++..+           
T Consensus         6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l-----------   70 (109)
T d1rwya_           6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGF-----------   70 (109)
T ss_dssp             SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHH-----------
T ss_pred             cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHh-----------
Confidence            577888888888744  5779999999877533  3456789999999999999999999998764332           


Q ss_pred             hhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHh
Q 042392          337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD  379 (436)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~  379 (436)
                         +  ..+..+++.++..+++.+|.|+||.|+|+||+.+|..
T Consensus        71 ---~--~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          71 ---S--SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             ---C--TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             ---c--cccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence               1  1133456678999999999999999999999998863

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.52  E-value=1.3e-14  Score=123.18  Aligned_cols=137  Identities=12%  Similarity=0.188  Sum_probs=96.0

Q ss_pred             HHHHHHHHHH-hCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          295 SEYLSKAFQY-FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       295 ~~~l~~~F~~-~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ..+++++|+. +|.|+||.|+..||..++..+..+.......-..    .............++...|.+++|.|++++|
T Consensus         7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~   82 (185)
T d2sasa_           7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADY----KSMQASLEDEWRDLKGRADINKDDVVSWEEY   82 (185)
T ss_dssp             HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHH----HHHHHHHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHH----HHHHHHHHHHHHHHHHHhCcCCCCcEeeeHh
Confidence            4568888886 5888888888888876654432221111000000    0011122234556777889999999999999


Q ss_pred             HHHHHhhhccC---------CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          374 VNLMTDIYKLE---------TPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       374 ~~~~~~~~~~~---------~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ..++.......         ....+..+|+.+|+|++|+||.+||+.++..+|. ++++++.++..+|.|+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l-~~~~~~~~f~~~D~d~d  153 (185)
T d2sasa_          83 LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTTT
T ss_pred             hHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC-CHHHHHHHHHHcCCCCC
Confidence            98886543211         1245889999999999999999999999987764 77889999999999986

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.51  E-value=2.7e-14  Score=121.68  Aligned_cols=136  Identities=13%  Similarity=0.166  Sum_probs=93.5

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      +.....++++|..||.|++|+|+.+||...+...         .++.++....................+.+.++.++++
T Consensus        10 ~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (189)
T d1qv0a_          10 PRWIKRHKHMFDFLDINGNGKITLDEIVSKASDD---------ICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFP   80 (189)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHT---------HHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH---------HHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehH
Confidence            3445679999999999999999999996542110         1122233222111111122233445667889999999


Q ss_pred             HHHHHHHhhhcc-------C----CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          372 EFVNLMTDIYKL-------E----TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       372 EF~~~~~~~~~~-------~----~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ||..++......       .    ..+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++.|++.+|.|+|
T Consensus        81 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~d  157 (189)
T d1qv0a_          81 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNA  157 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCC
Confidence            999988653221       1    12357789999999999999999999999999988 99999999999999986

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=2.3e-14  Score=109.48  Aligned_cols=105  Identities=18%  Similarity=0.240  Sum_probs=83.3

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhh
Q 042392          254 GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT  333 (436)
Q Consensus       254 ~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~  333 (436)
                      +..++.++|..+++..+.  +|.++|.+|+..+..  .....+.++++|+.||+|++|+|+..||+.++..+        
T Consensus         3 ~d~ls~~dI~~~l~~~~~--~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l--------   70 (108)
T d1rroa_           3 TDILSAEDIAAALQECQD--PDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKF--------   70 (108)
T ss_dssp             GGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGT--------
T ss_pred             hhhCCHHHHHHHHHhccc--CCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHH--------
Confidence            446788999999888754  556999999876532  33466789999999999999999999998774332        


Q ss_pred             hhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                              ...+..++++++.++++.+|.|+||.|+|+||+.+|.
T Consensus        71 --------~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          71 --------QSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             --------CTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             --------HhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence                    1123445677899999999999999999999999874

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.51  E-value=9.3e-14  Score=116.41  Aligned_cols=145  Identities=10%  Similarity=0.031  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhhhh--------hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHH
Q 042392          260 FDVKQLMEAADMDGNGAIDYTEFTAATIQRQK--------LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI  331 (436)
Q Consensus       260 ~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~--------~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~  331 (436)
                      .+++.+|..+|. .+|.|+..|+..++.....        ....+.++..+..+|.|++|.|++.||......       
T Consensus         4 ~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------   75 (173)
T d1alva_           4 RQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------   75 (173)
T ss_dssp             HHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh-------
Confidence            467899999994 4899999999988754321        123567899999999999999999999654111       


Q ss_pred             hhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHH
Q 042392          332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET  411 (436)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~  411 (436)
                                        ...+..+++.+|.|++|.|+.+||..++.......++ ++..+|..+|.|++|.|+++||.+
T Consensus        76 ------------------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~-~~~~~~~~~d~d~~G~i~~~EF~~  136 (173)
T d1alva_          76 ------------------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFIS  136 (173)
T ss_dssp             ------------------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCH-HHHHHHHHHHTCSSSCBCHHHHHH
T ss_pred             ------------------hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHH-HHHHHhhccccCCCCeEeHHHHHH
Confidence                              1247788999999999999999999999876655554 455667777889999999999999


Q ss_pred             HHHhCCCCChHHHHHHHHhhccCCC
Q 042392          412 AFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       412 ~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ++..     .+.+..+++.+|.|+|
T Consensus       137 ~~~~-----~~~~~~~f~~~D~d~~  156 (173)
T d1alva_         137 CLVR-----LDAMFRAFKSLDKDGT  156 (173)
T ss_dssp             HHHH-----HHHHHHHHHHHSSSCC
T ss_pred             HHHH-----HHHHHHHHHHhCCCCC
Confidence            9864     3568889999999885

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.50  E-value=6.7e-14  Score=117.43  Aligned_cols=131  Identities=17%  Similarity=0.190  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHc--cccCCCCcccHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ--GDIDGNGNIDFIE  372 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~g~i~f~E  372 (436)
                      ..+++.+|+.+|.|++|+|+..||..++..+..          ...................+..  .+.+++|.|+++|
T Consensus         5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e   74 (174)
T d2scpa_           5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAK----------ESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETT   74 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHH----------HSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHH
T ss_pred             HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhc----------cccchhHHHHHhHHhhhhhccccccccCCCCcCcHHH
Confidence            456888899999999999888888654322211          1111111111111222333333  3677899999999


Q ss_pred             HHHHHHhhhccCC-----HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKLET-----PELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~~~-----~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      |+..+........     ...++.+|+.+|+|+||+||.+||+.++..++. +.++++.+++.+|.|+|
T Consensus        75 f~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~-~~~~~~~~f~~~D~d~d  142 (174)
T d2scpa_          75 FINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNND  142 (174)
T ss_dssp             HHHHHHHHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC-CGGGHHHHHHHHCTTCS
T ss_pred             HHHHHHhhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh-hhHHHHHHHhhcCCCCC
Confidence            9998866543211     234889999999999999999999999988765 67889999999999986

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.49  E-value=3.7e-14  Score=120.55  Aligned_cols=133  Identities=14%  Similarity=0.165  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ...++++|+.+|.|++|+|+..||...+...         .++.++........................++.+++.+|+
T Consensus        11 ~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (187)
T d1uhka1          11 IGRHKHMFNFLDVNHNGKISLDEMVYKASDI---------VINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYI   81 (187)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHH---------HHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH---------HHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHH
Confidence            4578899999999999999999986543221         1122233322221112122333334455667889999998


Q ss_pred             HHHHhhhcc---------C--CHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhhccCCC
Q 042392          375 NLMTDIYKL---------E--TPELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEVGRDHK  436 (436)
Q Consensus       375 ~~~~~~~~~---------~--~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~d~~~d  436 (436)
                      ..+......         .  ....++.+|+.||+|++|+||.+||+.+|..+|.. ++++++.+++.+|.|+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~d  155 (187)
T d1uhka1          82 EGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES  155 (187)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCC
Confidence            877543321         1  11348899999999999999999999999999888 99999999999999886

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.47  E-value=2.7e-13  Score=113.66  Aligned_cols=131  Identities=20%  Similarity=0.266  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCc---hh---hhhHHHHHHHHHccccCCCCcc
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT---KQ---FRAMNMLKKLVLQGDIDGNGNI  368 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~d~~~~g~i  368 (436)
                      .++++++|+.+|.|++|.|+..||..++..+..   .       ++....   ..   .........++...+.+++|.|
T Consensus         6 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   75 (176)
T d1nyaa_           6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAE---A-------FGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSL   75 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHH---H-------TSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCB
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---H-------cCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence            456888888888888888888888765433211   1       111110   00   0111234567778889999999


Q ss_pred             cHHHHHHHHHhhhccCC--------HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhhccCCC
Q 042392          369 DFIEFVNLMTDIYKLET--------PELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDHK  436 (436)
Q Consensus       369 ~f~EF~~~~~~~~~~~~--------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~d~~~d  436 (436)
                      ++.++...+........        ...++.+|..||+|+||+|+.+||+.++..++. ++++++.++..+|.|+|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~-~~~~~~~~f~~~D~d~d  150 (176)
T d1nyaa_          76 TEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM-SKAEAAEAFNQVDTNGN  150 (176)
T ss_dssp             CHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCS
T ss_pred             cHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC-cHHHHHHHHHHHCCCCC
Confidence            99999987766544322        245889999999999999999999999998765 78899999999999986

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=9.1e-14  Score=117.03  Aligned_cols=128  Identities=12%  Similarity=0.117  Sum_probs=87.1

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccC-CCCcccHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDID-GNGNIDFIE  372 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~f~E  372 (436)
                      +...+.+.|..+|++++|.++......  ...+++...+..          ..++   .++++++.+|.| ++|.|+|+|
T Consensus        15 EI~~l~~~F~~l~~~~~~~~~~~~~~~--i~~~e~~~~~~l----------~~~~---~~~rif~~fd~~~~~g~I~f~E   79 (180)
T d1xo5a_          15 EILLAHRRFCELLPQEQRSVESSLRAQ--VPFEQILSLPEL----------KANP---FKERICRVFSTSPAKDSLSFED   79 (180)
T ss_dssp             HHHHHHHHHHTTSCGGGCSHHHHHHCC--EEHHHHHTSHHH----------HTCT---THHHHHHHHCCSTTCCEECHHH
T ss_pred             HHHHHHHHHHHHCcCccccccccccce--EcHHHHhcCccc----------ccCh---HHHHHHHhccCCCCCCcCcHHH
Confidence            345567778888888877655443332  222222111100          0100   256788889987 699999999


Q ss_pred             HHHHHHhhhcc-CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-----CCC-ChHH----HHHHHHhhccCCC
Q 042392          373 FVNLMTDIYKL-ETPELLEKAFQYLDKNSDQFITVNELETAFKEN-----NMG-DDAT----IKEIISEVGRDHK  436 (436)
Q Consensus       373 F~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-----~~~-~~~e----~~~~~~~~d~~~d  436 (436)
                      |+.++...... ..++.++.||+.||+|++|+||.+||..++..+     +.. ++++    ++.+++++|.|+|
T Consensus        80 Fv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~d  154 (180)
T d1xo5a_          80 FLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRD  154 (180)
T ss_dssp             HHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCC
Confidence            99998776544 335679999999999999999999999998764     222 4444    4557888898876

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.45  E-value=2.5e-13  Score=113.94  Aligned_cols=107  Identities=16%  Similarity=0.122  Sum_probs=76.8

Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ....+...|.+++|.++..++.........           ..............+..+|..+|.|++|.|+.+||..++
T Consensus        60 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~  128 (176)
T d1nyaa_          60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIF-----------EQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWL  128 (176)
T ss_dssp             HHHHHHHHTSCTTCCBCHHHHHHHHHHHHS-----------SSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHhhhhh-----------hhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHH
Confidence            345667777888888777776543111100           000000122233467889999999999999999999988


Q ss_pred             HhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC
Q 042392          378 TDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN  417 (436)
Q Consensus       378 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~  417 (436)
                      ....  .++++++.+|+.+|.|+||.|+.+||..++....
T Consensus       129 ~~~~--~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~  166 (176)
T d1nyaa_         129 TALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFH  166 (176)
T ss_dssp             HHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred             HhcC--CcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHh
Confidence            7543  5678999999999999999999999999998643

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.40  E-value=1.1e-13  Score=99.89  Aligned_cols=67  Identities=19%  Similarity=0.332  Sum_probs=55.1

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++..+++++|+.||+|++|+|+..||..++..+                   + .++.+++.++++.+|.|++|.|+|+|
T Consensus         3 ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~l-------------------g-~~~~~ei~~~~~~~D~d~~G~I~~~E   62 (81)
T d2opoa1           3 QDIADRERIFKRFDTNGDGKISSSELGDALKTL-------------------G-SVTPDEVRRMMAEIDTDGDGFISFDE   62 (81)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTT-------------------T-TCCHHHHHHHHHHHCTTCSSEECHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHh-------------------h-cCCHHHHHHHHHHhCCCCCCeEeHHH
Confidence            456789999999999999999999997663332                   2 24566899999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        63 F~~~~~~   69 (81)
T d2opoa1          63 FTDFARA   69 (81)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998864

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.39  E-value=6.6e-13  Score=100.95  Aligned_cols=84  Identities=17%  Similarity=0.217  Sum_probs=71.6

Q ss_pred             hHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC---CC-ChHHH
Q 042392          349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN---MG-DDATI  424 (436)
Q Consensus       349 ~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~---~~-~~~e~  424 (436)
                      +.+++..++...+.  +|.|+|.||+.++..  .....++++.+|+.||+|++|+|+.+||+.+++.++   .. +++++
T Consensus         6 s~~di~~~~~~~~~--~gsi~~~eF~~~~~l--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~   81 (107)
T d2pvba_           6 KDADVAAALAACSA--ADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAET   81 (107)
T ss_dssp             CHHHHHHHHHHTCS--TTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHH
T ss_pred             CHHHHHHHHHhccC--CCCcCHHHHHHHHhc--ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHH
Confidence            44578899988865  567999999998763  234678899999999999999999999999998874   34 89999


Q ss_pred             HHHHHhhccCCC
Q 042392          425 KEIISEVGRDHK  436 (436)
Q Consensus       425 ~~~~~~~d~~~d  436 (436)
                      ++||+++|.|+|
T Consensus        82 ~~l~~~~D~d~d   93 (107)
T d2pvba_          82 KAFLADGDKDGD   93 (107)
T ss_dssp             HHHHHHHCTTCS
T ss_pred             HHHHHHhCCCCC
Confidence            999999999876

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.36  E-value=3.5e-13  Score=97.10  Aligned_cols=73  Identities=22%  Similarity=0.319  Sum_probs=60.5

Q ss_pred             hhhhhccHHHHHHHHHHhCCCC-CCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCC
Q 042392          288 QRQKLERSEYLSKAFQYFDKDN-SGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNG  366 (436)
Q Consensus       288 ~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g  366 (436)
                      .....++..+++++|+.||++| +|+|+..||..++..+                   |..+++.++.++++.+|.|++|
T Consensus         7 ~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~l-------------------g~~~t~~el~~~i~~~D~d~~G   67 (82)
T d1wrka1           7 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-------------------GQNPTPEELQEMIDEVDEDGSG   67 (82)
T ss_dssp             HHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHT-------------------TCCCCHHHHHHHHHTTCTTCCS
T ss_pred             hhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCC
Confidence            3444556678999999999996 7999999998764333                   4555677999999999999999


Q ss_pred             cccHHHHHHHHHh
Q 042392          367 NIDFIEFVNLMTD  379 (436)
Q Consensus       367 ~i~f~EF~~~~~~  379 (436)
                      .|+|+||+.+|..
T Consensus        68 ~I~f~eFl~im~~   80 (82)
T d1wrka1          68 TVDFDEFLVMMVR   80 (82)
T ss_dssp             SBCHHHHHHHHHH
T ss_pred             eEeHHHHHHHHHh
Confidence            9999999998875

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.36  E-value=1.3e-13  Score=94.85  Aligned_cols=64  Identities=28%  Similarity=0.545  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .++++++|+.||+|++|+|+.+||+.++..+                   +..+++.++..+++.+|.|++|.|+|+||+
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~l-------------------g~~~~~~e~~~l~~~~D~d~~g~I~~~eF~   62 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNL-------------------GEKLTDEEVDEMIREADIDGDGQVNYEEFV   62 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHTTCTTCSSSEEHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHcCCCCCCcEeHHHHH
Confidence            3679999999999999999999997663332                   445667789999999999999999999999


Q ss_pred             HHH
Q 042392          375 NLM  377 (436)
Q Consensus       375 ~~~  377 (436)
                      .+|
T Consensus        63 ~~m   65 (65)
T d1fw4a_          63 QMM   65 (65)
T ss_dssp             HHC
T ss_pred             HHC
Confidence            864

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.35  E-value=1.9e-13  Score=96.88  Aligned_cols=68  Identities=25%  Similarity=0.469  Sum_probs=54.6

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+.++++.+|+.||+|++|+|+..||..++..+                   +..++++++.++++.+|.|++|.|+|+|
T Consensus         6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-------------------g~~~~~~e~~~~~~~~D~d~dg~I~~~E   66 (75)
T d1jc2a_           6 KSEEELANCFRIFDKNADGFIDIEELGEILRAT-------------------GEHVIEEDIEDLMKDSDKNNDGRIDFDE   66 (75)
T ss_dssp             CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-------------------SSCCCHHHHHHHHHHHCSSSCSEECHHH
T ss_pred             CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-------------------CCCccHHHHHHHHHHhCCCCCCcEeHHH
Confidence            456789999999999999999999987663332                   3455666899999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        67 F~~~m~~   73 (75)
T d1jc2a_          67 FLKMMEG   73 (75)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9988764

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.35  E-value=2.3e-14  Score=104.84  Aligned_cols=85  Identities=27%  Similarity=0.363  Sum_probs=68.1

Q ss_pred             CCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHH
Q 042392          272 DGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN  351 (436)
Q Consensus       272 d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (436)
                      +++|.|+..+..  +......++...++++|+.||+|++|+|+..||..+++.+                   +..+++.
T Consensus         1 ~~~g~id~~~~~--ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~l-------------------g~~~s~~   59 (87)
T d1s6ja_           1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-------------------GSELMES   59 (87)
T ss_dssp             CCSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTT-------------------TSSCCHH
T ss_pred             CCCCccCchHHH--HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHc-------------------CCCCCHH
Confidence            357888888844  3344455566679999999999999999999997764333                   4456677


Q ss_pred             HHHHHHHccccCCCCcccHHHHHHHH
Q 042392          352 MLKKLVLQGDIDGNGNIDFIEFVNLM  377 (436)
Q Consensus       352 ~~~~~~~~~d~~~~g~i~f~EF~~~~  377 (436)
                      ++.++++.+|.|++|.|+|+||+.+|
T Consensus        60 e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          60 EIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            89999999999999999999999765

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.35  E-value=1.8e-12  Score=99.02  Aligned_cols=85  Identities=19%  Similarity=0.258  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC---CC-ChHH
Q 042392          348 RAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN---MG-DDAT  423 (436)
Q Consensus       348 ~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~---~~-~~~e  423 (436)
                      ++.+++.+++..++.  +|.|+|+||+.++....  ...+.++.+|+.||+|++|+|+.+||+.+|..++   .. ++++
T Consensus         6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e   81 (109)
T d1rwya_           6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE   81 (109)
T ss_dssp             SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred             cCHHHHHHHHHhccc--CCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH
Confidence            455689999988755  58899999999876432  4577899999999999999999999999998764   34 8999


Q ss_pred             HHHHHHhhccCCC
Q 042392          424 IKEIISEVGRDHK  436 (436)
Q Consensus       424 ~~~~~~~~d~~~d  436 (436)
                      ++.|++++|.|+|
T Consensus        82 ~~~~~~~~D~d~d   94 (109)
T d1rwya_          82 TKTLMAAGDKDGD   94 (109)
T ss_dssp             HHHHHHHHCTTCS
T ss_pred             HHHHHHHhCCCCC
Confidence            9999999999986

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.33  E-value=3.8e-13  Score=96.87  Aligned_cols=70  Identities=27%  Similarity=0.355  Sum_probs=57.3

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .+...+++++|+.||+||+|+|+..||..++..+                   +..+++.++.++++.+|.|++|.|+|+
T Consensus        10 ~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~s~~e~~~~~~~~D~d~~g~I~~~   70 (81)
T d1avsa_          10 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-------------------GQNPTKEELDAIIEEVDEDGSGTIDFE   70 (81)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-------------------TCCCCHHHHHHHHHHHCTTCCSSEEHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHc-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            3445678999999999999999999997663332                   444566789999999999999999999


Q ss_pred             HHHHHHHhh
Q 042392          372 EFVNLMTDI  380 (436)
Q Consensus       372 EF~~~~~~~  380 (436)
                      ||+.+|...
T Consensus        71 eF~~~m~~k   79 (81)
T d1avsa_          71 EFLVMMVRQ   79 (81)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999988653

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.32  E-value=3.6e-12  Score=91.63  Aligned_cols=70  Identities=29%  Similarity=0.482  Sum_probs=65.3

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +++++..++++|..+|.+++|.|+..||..+++.+| .++..++..+++.+|.|++|.|+|.||+.++...
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            478899999999999999999999999999999999 6899999999999999999999999999877543

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.31  E-value=2.4e-13  Score=94.26  Aligned_cols=64  Identities=28%  Similarity=0.426  Sum_probs=54.1

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchh-hhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQ-FRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      ++++++|+.||++++|+|+..||..++..+                   +. .++++++..+++.+|.|++|.|+|+||+
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~   62 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKV-------------------GEEPLTDAEVEEAMKEADEDGNGVIDIPEFM   62 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTT-------------------TTCCCCHHHHHHHHHHHCSSGGGSEEHHHHH
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHh-------------------CCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            568999999999999999999997764333                   33 3467789999999999999999999999


Q ss_pred             HHHH
Q 042392          375 NLMT  378 (436)
Q Consensus       375 ~~~~  378 (436)
                      .+|.
T Consensus        63 ~~m~   66 (68)
T d1c7va_          63 DLIK   66 (68)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=4.9e-13  Score=95.48  Aligned_cols=68  Identities=29%  Similarity=0.441  Sum_probs=57.0

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++..+++++|+.||.|++|+|+..||..++..+                   |..+++.++.++++.+|.|++|.|+|+|
T Consensus         7 eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~t~~e~~~~~~~~D~~~~g~I~~~e   67 (77)
T d1f54a_           7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSL-------------------GLSPSEAEVNDLMNEIDVDGNHQIEFSE   67 (77)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-------------------TCCCCHHHHHHHHHTTCCSSCCEEEHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHHH
Confidence            445679999999999999999999998764333                   4455667899999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        68 F~~~m~~   74 (77)
T d1f54a_          68 FLALMSR   74 (77)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            9998864

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.2e-13  Score=112.42  Aligned_cols=118  Identities=8%  Similarity=0.127  Sum_probs=80.7

Q ss_pred             HHHHHHHH--hCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHH
Q 042392          297 YLSKAFQY--FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV  374 (436)
Q Consensus       297 ~l~~~F~~--~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~  374 (436)
                      .++++|..  +|.|++|.|+++||.+++.....                 ....+...+..++...|.+++|.|+|+||.
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~-----------------~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~   68 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRK-----------------RVEAALSACHLPKGKNDAINPEDFPEPVYK   68 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHH-----------------HHHHHHHHTTCCCCTTCEECGGGCCHHHHH
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhh-----------------hHHHHHHHHhhhhccccccCCCccCHHHHH
Confidence            46666665  79999999999999776432210                 111233456677888999999999999999


Q ss_pred             HHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCC----------C-ChHHHHHHHHhhccC
Q 042392          375 NLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNM----------G-DDATIKEIISEVGRD  434 (436)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~----------~-~~~e~~~~~~~~d~~  434 (436)
                      .++.....   ..++..+|+.||.|++|+||.+||+.+|.....          . +.+.+.++|..+..+
T Consensus        69 ~~~~~l~~---r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~  136 (170)
T d2zkmx1          69 SFLMSLCP---RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPS  136 (170)
T ss_dssp             HHHHHHSC---CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC
T ss_pred             HHHhccCC---HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccc
Confidence            99876643   467999999999999999999999999986432          1 556788899887655

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.31  E-value=5.3e-13  Score=94.14  Aligned_cols=68  Identities=31%  Similarity=0.480  Sum_probs=55.5

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++..+++.+|+.||+|++|+|+..||..++..+                   +..++++++.++++.+|.|++|.|+|+|
T Consensus         5 eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~s~~~~~~~~~~~D~d~~g~I~f~e   65 (73)
T d2pq3a1           5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-------------------GQNPTEAELQDMINEVDADGNGTIDFPE   65 (73)
T ss_dssp             HHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHT-------------------TCCCCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred             HHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCeEeHHH
Confidence            445678999999999999999999997663333                   3445667899999999999999999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        66 F~~~m~~   72 (73)
T d2pq3a1          66 FLTMMAR   72 (73)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9998764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.30  E-value=4.4e-13  Score=96.52  Aligned_cols=68  Identities=28%  Similarity=0.485  Sum_probs=50.9

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      .+.++++++|+.||+|++|+|+..||..++..              +     +.+++++++..+++.+|.|++|.|+|+|
T Consensus        12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------~-----g~~~~~~ev~~~~~~~D~d~dg~I~~~E   72 (81)
T d1fi5a_          12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQA--------------T-----GETITEDDIEELMKDGDKNNDGRIDYDE   72 (81)
T ss_dssp             CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHT--------------S-----SSCCCHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh--------------c-----CCCCCHHHHHHHHHHHCCCCCCcEeHHH
Confidence            34567888888888888888888888665322              2     3345556788888888888888888888


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        73 F~~~m~~   79 (81)
T d1fi5a_          73 FLEFMKG   79 (81)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHHh
Confidence            8887753

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.30  E-value=7.3e-13  Score=94.55  Aligned_cols=67  Identities=25%  Similarity=0.421  Sum_probs=45.0

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      +.++++++|+.||+|++|+|+..||..++..+                   +..++..++.++++.+|.|++|.|+|+||
T Consensus         7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~-------------------g~~~~~~e~~~~~~~~D~d~~G~I~~~EF   67 (77)
T d1oqpa_           7 SREEILKAFRLFDDDNSGTITIKDLRRVAKEL-------------------GENLTEEELQEMIAEADRNDDNEIDEDEF   67 (77)
T ss_dssp             HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH-------------------TCCCCHHHHHHHHHHHCCSSSSEECHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEechHHHHHHHHHh-------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            44567777777777777777777776553222                   23344456777777777777777777777


Q ss_pred             HHHHHh
Q 042392          374 VNLMTD  379 (436)
Q Consensus       374 ~~~~~~  379 (436)
                      +.+|.+
T Consensus        68 ~~~m~k   73 (77)
T d1oqpa_          68 IRIMKK   73 (77)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            777654

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.30  E-value=6e-12  Score=90.45  Aligned_cols=76  Identities=25%  Similarity=0.440  Sum_probs=70.7

Q ss_pred             HHHhcCChhhHHHHHHHhhhhCCCC-CCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          213 VIVEYLPGEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       213 ~~~~~l~~e~~~~l~~~F~~~D~~~-~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+..++++++..++.+|..+|.++ +|.|+..||..+++.+|.++++.++..+++.+|.|++|.|+|.||+..+..
T Consensus         4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1           4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            3456789999999999999999995 799999999999999999999999999999999999999999999988753

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.30  E-value=2.9e-12  Score=90.22  Aligned_cols=72  Identities=32%  Similarity=0.548  Sum_probs=68.3

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +++++++..++.+|..+|.+++|.|+..+|..+++.+|..++.+++..+++.+|.|++|.|+|.||+..+..
T Consensus         1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            468899999999999999999999999999999999999999999999999999999999999999987643

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.29  E-value=4.1e-12  Score=96.69  Aligned_cols=86  Identities=8%  Similarity=0.190  Sum_probs=71.3

Q ss_pred             hhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCC---CC-ChH
Q 042392          347 FRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENN---MG-DDA  422 (436)
Q Consensus       347 ~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~---~~-~~~  422 (436)
                      .++.++|..+++..+  .+|.++|.+|...+..  .....++++.+|+.||+|++|+|+.+||+.+|..++   .. +++
T Consensus         5 ~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~   80 (108)
T d1rroa_           5 ILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTES   80 (108)
T ss_dssp             TSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHH
T ss_pred             hCCHHHHHHHHHhcc--cCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHH
Confidence            345668888888775  4678999999876542  335678899999999999999999999999998763   34 889


Q ss_pred             HHHHHHHhhccCCC
Q 042392          423 TIKEIISEVGRDHK  436 (436)
Q Consensus       423 e~~~~~~~~d~~~d  436 (436)
                      +++.|++.+|.|+|
T Consensus        81 ~~~~~~~~~D~d~d   94 (108)
T d1rroa_          81 ETKSLMDAADNDGD   94 (108)
T ss_dssp             HHHHHHHHHCCSSS
T ss_pred             HHHHHHHHhCCCCC
Confidence            99999999999986

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.29  E-value=8.3e-13  Score=89.42  Aligned_cols=61  Identities=26%  Similarity=0.395  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       296 ~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      ++++++|+.||++++|+|+..||+.++..+                   +..+++.++..+++.+|.|++|.|+|+||+.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~-------------------g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGL-------------------GEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHT-------------------TCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHc-------------------CCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            468999999999999999999997764332                   4456677899999999999999999999984

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.27  E-value=7.8e-12  Score=89.83  Aligned_cols=72  Identities=29%  Similarity=0.500  Sum_probs=68.6

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .++++++..++.+|..+|.+++|.|+..||..+++.+|.++++.++..+++.+|.|++|.|+|.||+..+..
T Consensus         7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999999988754

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=5.3e-12  Score=89.94  Aligned_cols=72  Identities=35%  Similarity=0.542  Sum_probs=68.5

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .++++++..++.+|..+|.+++|.|+..||..+++.+|.+++..++..+++.+|.+++|.|+|.||+..+..
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_           3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999999999987643

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.24  E-value=1.1e-11  Score=114.12  Aligned_cols=158  Identities=20%  Similarity=0.289  Sum_probs=123.8

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHHHHHh
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYF  305 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~F~~~  305 (436)
                      +..+|..+|.+.+|.++..++........      .+...|+.+|.+++|.++..++......... .........++.+
T Consensus       160 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------~~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~  232 (321)
T d1ij5a_         160 LKKLFVMVENDTKGRMSYITLVAVANDLA------ALVADFRKIDTNSNGTLSRKEFREHFVRLGF-DKKSVQDALFRYA  232 (321)
T ss_dssp             HHHHHHHHHHCCSSTHHHHHHTTSHHHHH------TSCCCHHHHCTTCCSEECHHHHHHHHHHTTC-CCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCccccchhhhhhhhhhh------hhhHHHHHHhhcccccchhHHHhhhhhcccc-cchHHHHHHHHhh
Confidence            56677788999999999999876544322      2334688999999999999999988765543 3445567788999


Q ss_pred             CCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhc-cC
Q 042392          306 DKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LE  384 (436)
Q Consensus       306 D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~-~~  384 (436)
                      |.+++|.+...++....                         .....+..++..+|.|++|.|+.+||..++....- ..
T Consensus       233 ~~~~~~~i~~~ef~~~~-------------------------~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~  287 (321)
T d1ij5a_         233 DEDESDDVGFSEYVHLG-------------------------LCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPES  287 (321)
T ss_dssp             CTTCSSCEEHHHHHHHH-------------------------HHHHHHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGG
T ss_pred             hcccccccccccccchh-------------------------hhhhHHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCCcC
Confidence            99999999988885431                         11124667899999999999999999999876653 24


Q ss_pred             CHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          385 TPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       385 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      +.+++...|+.+|.|+||+||++||..+|.-
T Consensus       288 ~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~  318 (321)
T d1ij5a_         288 ARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL  318 (321)
T ss_dssp             GCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4567999999999999999999999998853

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.19  E-value=1.6e-12  Score=94.83  Aligned_cols=74  Identities=53%  Similarity=0.802  Sum_probs=69.1

Q ss_pred             HHHhcCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          213 VIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       213 ~~~~~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      .++..++++++..++.+|..+|.+++|.|+..||..+++.+|..++++++..+++.+|.|++|.|+|+||+.++
T Consensus        12 ~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          12 HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            35567888999999999999999999999999999999999999999999999999999999999999998654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.19  E-value=6.3e-12  Score=71.28  Aligned_cols=32  Identities=25%  Similarity=0.484  Sum_probs=30.0

Q ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHhCC
Q 042392          386 PELLEKAFQYLDKNSDQFITVNELETAFKENN  417 (436)
Q Consensus       386 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~  417 (436)
                      +++++.||++||+||||+|+.+||+++|+.+|
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            57899999999999999999999999998875

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.15  E-value=3.3e-11  Score=82.53  Aligned_cols=62  Identities=37%  Similarity=0.684  Sum_probs=59.2

Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHH
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA  285 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~  285 (436)
                      +.++.+|..+|++.+|+|+.++|+.+++.+|.++++.++..+++.+|.|++|.|+|+||+..
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999975

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.15  E-value=4.1e-11  Score=82.63  Aligned_cols=63  Identities=17%  Similarity=0.268  Sum_probs=59.3

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ++++|+.+|.|++|.|+.+||..++.......++++++.+|+.+|.|+||.|+++||..+|..
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            688999999999999999999999998877788899999999999999999999999999875

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.14  E-value=5.9e-11  Score=84.33  Aligned_cols=71  Identities=20%  Similarity=0.190  Sum_probs=64.3

Q ss_pred             hhhhHHHHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       346 ~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      +.-+++++.++|+.+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|+++||.++|+.-
T Consensus         4 e~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_           4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             TSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence            33456689999999999999999999999999988877888999999999999999999999999999753

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.13  E-value=7.6e-11  Score=83.12  Aligned_cols=65  Identities=28%  Similarity=0.464  Sum_probs=61.5

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...++.+|..+|.+++|+|+..||..+++.+|.+++.++++.+++.+|.|++|.|+|+||+..+.
T Consensus         8 eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~   72 (75)
T d1jc2a_           8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME   72 (75)
T ss_dssp             HHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999999999999999999998764

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.13  E-value=6.3e-11  Score=81.64  Aligned_cols=62  Identities=34%  Similarity=0.544  Sum_probs=59.3

Q ss_pred             HHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       226 l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ++++|..+|.+.+|.|+..||..+++.+|.+++.+++..+|+.+|.|++|.|+|+||+..+.
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~   64 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999998764

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.11  E-value=6.3e-11  Score=79.88  Aligned_cols=60  Identities=33%  Similarity=0.609  Sum_probs=57.7

Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHH
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA  284 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~  284 (436)
                      .++++|..+|++.+|+|+..||..+++.+|.+++..++..+++.+|.|++|.|+|.||+.
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            578899999999999999999999999999999999999999999999999999999984

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.10  E-value=1e-10  Score=83.81  Aligned_cols=65  Identities=31%  Similarity=0.542  Sum_probs=61.4

Q ss_pred             HHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       223 ~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...++.+|..+|.+++|+|+..||..+++.+|.+++.++++.+++.+|.|++|.|+|+||+..+.
T Consensus        14 ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~   78 (81)
T d1fi5a_          14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK   78 (81)
T ss_dssp             HHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999999999999999998764

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.5e-12  Score=108.22  Aligned_cols=142  Identities=8%  Similarity=0.040  Sum_probs=86.3

Q ss_pred             HHHHhhh--hCCCCCCccCHHHHHHHHHhcCCCC--CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhhhccHHHHHHH
Q 042392          226 LKEKFIE--MDTDKNGTLSYDELRAGLTKVGSML--TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKA  301 (436)
Q Consensus       226 l~~~F~~--~D~~~~g~i~~~eL~~~l~~~~~~~--s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~~~~~~~~~l~~~  301 (436)
                      +.++|..  +|.+++|.|+..||.++++..+...  +.+.+..++...|.+++|.|+|+||...+....   ...++..+
T Consensus         7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~   83 (170)
T d2zkmx1           7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI   83 (170)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred             HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence            4455554  7999999999999999987654222  233556667778899999999999998875442   34578899


Q ss_pred             HHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCC-CchhhhhHHHHHHHHHccccCC----CCcccHHHHHHH
Q 042392          302 FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLG-NTKQFRAMNMLKKLVLQGDIDG----NGNIDFIEFVNL  376 (436)
Q Consensus       302 F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~----~g~i~f~EF~~~  376 (436)
                      |..+|.|++|+|+.+||..++.....          ...+. ......+.+.+.+++..+..+.    +|.|++++|..+
T Consensus        84 F~~~d~d~~~~it~~el~~fL~~~Q~----------~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~f  153 (170)
T d2zkmx1          84 FTSYHAKAKPYMTKEHLTKFINQKQR----------DSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWF  153 (170)
T ss_dssp             CC--------CCCHHHHHHHHHHTCC-------------------------CHHHHHHHHCCC--------CCHHHHHHH
T ss_pred             HHHHcCCCCCcccHHHHHHHHHHHhc----------chhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHH
Confidence            99999999999999999776433211          00000 0112345556888888876654    488999999997


Q ss_pred             HHhh
Q 042392          377 MTDI  380 (436)
Q Consensus       377 ~~~~  380 (436)
                      +...
T Consensus       154 L~S~  157 (170)
T d2zkmx1         154 LCGP  157 (170)
T ss_dssp             HHST
T ss_pred             HcCc
Confidence            7543

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.09  E-value=2.5e-11  Score=85.99  Aligned_cols=70  Identities=24%  Similarity=0.400  Sum_probs=51.6

Q ss_pred             cHHHHHHHHHHhCCC--CCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFDKD--NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~--~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      +.++++++|+.||.+  ++|+|+..||..++..+              |...+   .++.++.++++.+|.|+||.|+|+
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~l--------------g~~~~---~~~~ei~~~~~~~D~d~dG~I~f~   65 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL--------------GPSLL---KGMSTLDEMIEEVDKNGDGEVSFE   65 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH--------------GGGSC---TTSCSHHHHHHHHCTTCSSEECHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHh--------------CCcCC---CCHHHHHHHHHHhhcCCCCcCcHH
Confidence            456799999999653  57999999997664333              11110   112358999999999999999999


Q ss_pred             HHHHHHHhh
Q 042392          372 EFVNLMTDI  380 (436)
Q Consensus       372 EF~~~~~~~  380 (436)
                      ||+.+|...
T Consensus        66 EF~~~m~~~   74 (76)
T d1qx2a_          66 EFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988754

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.04  E-value=1.1e-10  Score=80.58  Aligned_cols=64  Identities=34%  Similarity=0.584  Sum_probs=59.4

Q ss_pred             HHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCC-CCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       224 ~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~-~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +.++.+|..+|.+++|.|+..||..+++.+|.. ++.+++..+++.+|.|++|.|+|+||+..+.
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            357899999999999999999999999999874 7999999999999999999999999998764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.3e-10  Score=82.57  Aligned_cols=65  Identities=11%  Similarity=0.176  Sum_probs=54.4

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....++++|+.+|.+++|+|+..||..++..+              +     ..++++++..+++.+|.|++|.|+|.||
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~--------------~-----~~l~~~e~~~l~~~~d~~~~g~I~y~eF   78 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNRR--------------V-----QILTDEQFDRLWNEMPVNAKGRLKYPDF   78 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH--------------T-----CCCCHHHHHHHHTTSCBCTTSCBCHHHH
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHHh--------------C-----CCCChhHHHHHhhccccCCCCcEeHHHH
Confidence            34579999999999999999999997763332              3     3456678999999999999999999999


Q ss_pred             HHHH
Q 042392          374 VNLM  377 (436)
Q Consensus       374 ~~~~  377 (436)
                      +..+
T Consensus        79 l~~f   82 (83)
T d1wlza1          79 LSRF   82 (83)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9865

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.96  E-value=1.8e-10  Score=84.90  Aligned_cols=74  Identities=22%  Similarity=0.241  Sum_probs=56.5

Q ss_pred             cHHHHHHHHHHh-CCCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYF-DKDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..+.+.++|+.| |+||+ |+|+..||+.++...              +........++..+.++++.+|.|+||.|+|+
T Consensus         7 ~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~--------------~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~   72 (93)
T d1zfsa1           7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTE--------------LSSFLDVQKDADAVDKIMKELDENGDGEVDFQ   72 (93)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHH--------------STTTSCCSSCHHHHHHHHHHHTTTCCSEECSH
T ss_pred             HHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHh--------------cccccccCCCHHHHHHHHHHHcCCCCCCCcHH
Confidence            456799999998 88875 999999997653222              22222234456789999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++....
T Consensus        73 EF~~lm~~l~   82 (93)
T d1zfsa1          73 EFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887543

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=8.5e-10  Score=79.45  Aligned_cols=65  Identities=25%  Similarity=0.404  Sum_probs=61.3

Q ss_pred             hHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 042392          222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAAT  286 (436)
Q Consensus       222 ~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~  286 (436)
                      ....+.++|..+|.+.+|.|+.+||..++..++.+++++++..++..+|.+++|.|+|.||+..+
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            35668899999999999999999999999999999999999999999999999999999999865

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.90  E-value=4.8e-10  Score=81.94  Aligned_cols=76  Identities=14%  Similarity=0.038  Sum_probs=57.3

Q ss_pred             hccHHHHHHHHHHh-CCCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          292 LERSEYLSKAFQYF-DKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ......+..+|+.| |++|+| +|+..||++.+...              .....+...++..+.++++.+|.|+||.|+
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~--------------~~~~~~~~~~~~~~~~~~~~lD~n~Dg~Id   70 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKE--------------LATWTPTEFRECDYNKFMSVLDTNKDCEVD   70 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHH--------------TTTCCCCTTCHHHHHHHHHHHHHTTTCEEC
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHh--------------hhcccccCCCHHHHHHHHHHHcCCCCCCCc
Confidence            34556789999987 999999 59999997653221              111123344566899999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 042392          370 FIEFVNLMTDIY  381 (436)
Q Consensus       370 f~EF~~~~~~~~  381 (436)
                      |+||+.++..+.
T Consensus        71 F~EF~~l~~~l~   82 (93)
T d1ksoa_          71 FVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887653

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.7e-09  Score=79.87  Aligned_cols=69  Identities=23%  Similarity=0.292  Sum_probs=63.8

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+++++...+..+|..+|++++|.|+.+|+..++.+.+  ++.+++..+|+..|.|++|.|++.||+.++.
T Consensus         3 ~lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_           3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            46889999999999999999999999999999998876  6889999999999999999999999998764

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=2.7e-09  Score=78.25  Aligned_cols=69  Identities=26%  Similarity=0.372  Sum_probs=64.1

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+++++...+..+|..+|.+++|.++.+|+...+.+.+  ++..++..+|+..|.|++|.|+++||+.++.
T Consensus         2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            46899999999999999999999999999999999876  6889999999999999999999999997664

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.88  E-value=1.2e-10  Score=82.56  Aligned_cols=72  Identities=19%  Similarity=0.323  Sum_probs=52.0

Q ss_pred             ccHHHHHHHHHHhCC-C-CCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYFDK-D-NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~-~-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.++.+|+.||. + ++|+|+..||+..+...      +    .  +.     .++++.++++++.+|.|+||.|+|
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~------~----~--~~-----~~~~~~v~~~~~~~D~d~dG~Idf   66 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAE------F----P--SL-----LKGPRTLDDLFQELDKNGDGEVSF   66 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHH------C----S--SC-----CSSCCCSSHHHHHTCCCSSSSEEH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHH------c----C--CC-----CCCHHHHHHHHHHHcCCCCCcCcH
Confidence            356789999999974 3 45899999997664332      0    0  11     112235889999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        67 ~EF~~l~~~la   77 (78)
T d1cb1a_          67 EEFQVLVKKIS   77 (78)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHh
Confidence            99999887653

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.87  E-value=2.1e-10  Score=84.01  Aligned_cols=74  Identities=16%  Similarity=0.225  Sum_probs=55.0

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ...+.+..+|+.||.| +|+|+..||..++...      ...        ..+...++..++++++.+|.|+||.|+|+|
T Consensus         6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~------~~~--------~~~~~~~~~~v~~~~~~~D~n~DG~I~F~E   70 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKE------FPG--------FLENQKDPLAVDKIMKDLDQCRDGKVGFQS   70 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHH------CHH--------HHHHSCCTTHHHHHHHHHCTTSSSCBCHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHh------ccc--------cccccCCHHHHHHHHHHHhCCCCCCCcHHH
Confidence            3456799999999987 8999999998764321      100        012222445799999999999999999999


Q ss_pred             HHHHHHhhh
Q 042392          373 FVNLMTDIY  381 (436)
Q Consensus       373 F~~~~~~~~  381 (436)
                      |+.++....
T Consensus        71 F~~li~~l~   79 (92)
T d1a4pa_          71 FFSLIAGLT   79 (92)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887654

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=8.8e-10  Score=82.24  Aligned_cols=74  Identities=9%  Similarity=0.022  Sum_probs=42.0

Q ss_pred             HHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCc----hhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT----KQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       298 l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ++.+|+.+|.||||+|+..||..++...-.   .+    ........    .....+..+..+++.+|.|+||.|+|+||
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~---~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF   90 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELE---KV----YDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEF   90 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHH---TT----SCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHH---hc----chhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHH
Confidence            567788888888888888887654322100   00    00000000    11223445677777777777777777777


Q ss_pred             HHHHH
Q 042392          374 VNLMT  378 (436)
Q Consensus       374 ~~~~~  378 (436)
                      +.++.
T Consensus        91 ~~~~~   95 (99)
T d1snla_          91 LASTQ   95 (99)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            77654

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.2e-10  Score=82.25  Aligned_cols=66  Identities=20%  Similarity=0.150  Sum_probs=48.4

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++...++++|+.+|+|++|+|+.+|+..++              .+.++       +.+++.++++.+|.|++|.|+|+|
T Consensus         7 ~e~~~~~~~F~~~D~d~~G~is~~e~~~~l--------------~~~~l-------~~~~l~~i~~~~D~d~dG~l~~~E   65 (95)
T d1c07a_           7 AEKAKYDEIFLKTDKDMDGFVSGLEVREIF--------------LKTGL-------PSTLLAHIWSLCDTKDCGKLSKDQ   65 (95)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHH--------------HTTTC-------CHHHHHHHHHHHCTTCSSSEETTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCCcHHHHHHHH--------------HhcCC-------CHHHHHHHHHHhCCCCCCeEcHHH
Confidence            344567888988999999988888886542              22222       344688888888988899999999


Q ss_pred             HHHHHHh
Q 042392          373 FVNLMTD  379 (436)
Q Consensus       373 F~~~~~~  379 (436)
                      |+.+|..
T Consensus        66 F~~am~L   72 (95)
T d1c07a_          66 FALAFHL   72 (95)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9877643

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.84  E-value=6.4e-10  Score=82.38  Aligned_cols=71  Identities=13%  Similarity=0.174  Sum_probs=52.7

Q ss_pred             cHHHHHHHHHHh-CCCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYF-DKDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..+.+..+|+.| |.+|+ |+|+..||+..+...              +..   ...+.+.+.++++.+|.|+||.|+|+
T Consensus        12 ~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~--------------~~~---~~~~~~~v~~l~~~~D~d~DG~IdF~   74 (98)
T d1yuta1          12 SIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQ--------------LPH---LLKDVGSLDEKMKSLDVNQDSELKFN   74 (98)
T ss_dssp             HHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHH--------------CTT---TTCCSSCHHHHHHHHCTTCCSCBCHH
T ss_pred             HHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHh--------------ccc---cCCCHHHHHHHHHHhcCCCCCcCCHH
Confidence            346788999988 78875 999999997653221              110   01122358999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++....
T Consensus        75 EF~~l~~~l~   84 (98)
T d1yuta1          75 EYWRLIGELA   84 (98)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999987653

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.83  E-value=8.2e-10  Score=80.91  Aligned_cols=75  Identities=13%  Similarity=0.154  Sum_probs=55.4

Q ss_pred             ccHHHHHHHHHHh-CCCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYF-DKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      ...+.+.++|+.| |.||+| +|+..||+..+...      .        ....+...+++.+.++++.+|.|+||.|+|
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~------~--------~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F   71 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRE------L--------PSFLGKRTDEAAFQKLMSNLDSNRDNEVDF   71 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHH------C--------HHHHTTCCSHHHHHHHHHHHCTTCSSSEEH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHh------c--------hhccccCCCHHHHHHHHHHHcCCCCCCCCH
Confidence            3456799999998 677755 79999997663322      0        000123345668999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        72 ~EF~~lm~~l~   82 (93)
T d3c1va1          72 QEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887653

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.80  E-value=1.2e-09  Score=79.09  Aligned_cols=74  Identities=14%  Similarity=0.162  Sum_probs=55.9

Q ss_pred             hccHHHHHHHHHHh-CCCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCccc
Q 042392          292 LERSEYLSKAFQYF-DKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNID  369 (436)
Q Consensus       292 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~  369 (436)
                      ......+..+|+.| |++|+| +|+..||+..+...               + ..+...++..+.++++.+|.|+||.|+
T Consensus         5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e---------------~-~~~~~~~~~~~~~~~~~lD~d~Dg~Id   68 (89)
T d1k8ua_           5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKE---------------L-TIGSKLQDAEIARLMEDLDRNKDQEVN   68 (89)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHH---------------S-CCGGGTTSHHHHHHHHHHHHTTTCEEE
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHH---------------H-HhhccCCHHHHHHHHHHhcCCCCCCCc
Confidence            34456789999988 999999 68988886542221               0 013334556799999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 042392          370 FIEFVNLMTDIY  381 (436)
Q Consensus       370 f~EF~~~~~~~~  381 (436)
                      |+||+.++..+.
T Consensus        69 F~EF~~l~~~la   80 (89)
T d1k8ua_          69 FQEYVTFLGALA   80 (89)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887653

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.77  E-value=1.8e-09  Score=77.79  Aligned_cols=70  Identities=13%  Similarity=0.101  Sum_probs=52.3

Q ss_pred             cHHHHHHHHHHh-CCCCCCch-hhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYF-DKDNSGYD-EFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~G~i-~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ..+.+..+|+.| |++|+|.+ +..||+..+..      .+            +...+.+.++++++++|.|+||.|+|+
T Consensus         8 ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~------e~------------~~~~~~~~v~~i~~~~D~n~DG~IdF~   69 (87)
T d1xk4a1           8 ALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLET------ES------------PQYIRKKGADVWFKELDINTDGAVNFQ   69 (87)
T ss_dssp             HHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHH------HS------------CHHHHTTCHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHHHHHHcccCCCCCccCHHHHHHHHHH------hc------------CCccchHHHHHHHHHhCCCCCCcCcHH
Confidence            445688899888 99999964 77777654211      11            233344579999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++....
T Consensus        70 EF~~l~~~la   79 (87)
T d1xk4a1          70 EFLILVIKMG   79 (87)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999987653

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.6e-09  Score=79.42  Aligned_cols=65  Identities=23%  Similarity=0.283  Sum_probs=46.0

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHH
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIE  372 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~E  372 (436)
                      ++.+.++++|+.+|+|++|+|+..|+..++              .+.++       +..++.++++.+|.|++|.|+|+|
T Consensus         6 ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l--------------~~~~l-------~~~~l~~i~~~~D~d~dG~l~~~E   64 (92)
T d1fi6a_           6 EQRQYYVNQFKTIQPDLNGFIPGSAAKEFF--------------TKSKL-------PILELSHIWELSDFDKDGALTLDE   64 (92)
T ss_dssp             HHHHHHHHHHTTTCCSTTCEEEHHHHHHHH--------------HHHSS-------CHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred             HHHHHHHHHHHHhCCCcccchhHHHHHHHH--------------HHccC-------CHHHHHHHHHHhCCCCCCeecHHH
Confidence            344567788888888888888887776542              12222       334688888888888888888888


Q ss_pred             HHHHHH
Q 042392          373 FVNLMT  378 (436)
Q Consensus       373 F~~~~~  378 (436)
                      |+.+|.
T Consensus        65 F~~a~~   70 (92)
T d1fi6a_          65 FCAAFH   70 (92)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            876554

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.6e-08  Score=74.34  Aligned_cols=68  Identities=25%  Similarity=0.315  Sum_probs=62.4

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+++++...+.++|..+| +.+|.|+.+|+...+.+.|  ++.+++..+|+..|.|++|.|+++||+.++.
T Consensus         3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1           3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            468999999999999999 7899999999999999877  6788999999999999999999999987764

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.71  E-value=7.5e-09  Score=72.85  Aligned_cols=65  Identities=20%  Similarity=0.416  Sum_probs=54.7

Q ss_pred             HHHHHHhhhhCCC--CCCccCHHHHHHHHHhcCCCCC--HHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          224 QALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLT--EFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       224 ~~l~~~F~~~D~~--~~g~i~~~eL~~~l~~~~~~~s--~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +.++.+|..+|.+  .+|.|+.+||..+++.+|.+++  ..++..+++.+|.|++|.|+|+||+..+..
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            4578888888554  4699999999999999886654  457999999999999999999999987653

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.65  E-value=2.2e-08  Score=72.95  Aligned_cols=65  Identities=14%  Similarity=0.085  Sum_probs=54.7

Q ss_pred             HHHHHHHHccccCCCCcccHHHHHHHHHhh-----hccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHhC
Q 042392          351 NMLKKLVLQGDIDGNGNIDFIEFVNLMTDI-----YKLETPELLEKAFQYLDKNSDQFITVNELETAFKEN  416 (436)
Q Consensus       351 ~~~~~~~~~~d~~~~g~i~f~EF~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~  416 (436)
                      +.+..+|..+|.| +|.|+.+||..++...     ....+++.+.++|+.+|+|+||.|+++||..++..+
T Consensus         9 e~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            3578899999987 8999999999998753     223456679999999999999999999999998653

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.1e-08  Score=76.05  Aligned_cols=63  Identities=24%  Similarity=0.373  Sum_probs=52.0

Q ss_pred             HHHHHHccccCCCCcccHHHHHHHHHhhhcc-------C---------CHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL-------E---------TPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       353 ~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~-------~---------~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ++.+|+.+|.|+||.|+.+||..++......       .         ..+.++.+|+.+|+|+||.||.+||..++..
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            6789999999999999999999988653210       0         1134788999999999999999999998864

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.63  E-value=4e-08  Score=71.89  Aligned_cols=68  Identities=22%  Similarity=0.283  Sum_probs=57.9

Q ss_pred             hHHHHHHHhhhh-CCCCC-CccCHHHHHHHHHhcC-----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          222 ETQALKEKFIEM-DTDKN-GTLSYDELRAGLTKVG-----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       222 ~~~~l~~~F~~~-D~~~~-g~i~~~eL~~~l~~~~-----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      .+..+..+|..+ |.+++ |.|+.+||+.+++..+     .+++.+++..+++.+|.|++|.|+|+||+..+...
T Consensus         7 ~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l   81 (93)
T d1zfsa1           7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            456788999887 77764 8999999999998864     35688999999999999999999999999877443

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.62  E-value=2.3e-08  Score=71.57  Aligned_cols=75  Identities=13%  Similarity=0.180  Sum_probs=54.1

Q ss_pred             ccHHHHHHHHHHh-CCCCCC-chhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccH
Q 042392          293 ERSEYLSKAFQYF-DKDNSG-YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDF  370 (436)
Q Consensus       293 ~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f  370 (436)
                      .....+..+|+.| +++|++ +|+..||++.+...      +    .    .......++..++++++.+|.|+||.|+|
T Consensus         5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e------~----~----~~~~~~~~~~~v~~~~~~lD~n~Dg~idF   70 (87)
T d1e8aa_           5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKE------L----A----NTIKNIKDKAVIDEIFQGLDANQDEQVDF   70 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHH------S----T----TTSTTTTSHHHHHHHHHHHCTTCSSCEEH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHH------c----c----ccccCCCCHHHHHHHHHHHcCCCCCcCCH
Confidence            3456788999988 567665 69999997653221      1    1    11122345567999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 042392          371 IEFVNLMTDIY  381 (436)
Q Consensus       371 ~EF~~~~~~~~  381 (436)
                      +||+.++..+.
T Consensus        71 ~EF~~li~~l~   81 (87)
T d1e8aa_          71 QEFISLVAIAL   81 (87)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887643

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.61  E-value=7.1e-08  Score=70.30  Aligned_cols=68  Identities=19%  Similarity=0.308  Sum_probs=57.3

Q ss_pred             hhHHHHHHHhhhh-CCCCC-CccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          221 EETQALKEKFIEM-DTDKN-GTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       221 e~~~~l~~~F~~~-D~~~~-g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +.+..+..+|..+ +.+++ |+|+.+||+.+++.     ++...++++++.+++.+|.|+||.|+|+||+..+..
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            3467788999987 66654 47999999999987     356789999999999999999999999999987654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.61  E-value=8.2e-09  Score=72.85  Aligned_cols=68  Identities=19%  Similarity=0.331  Sum_probs=56.8

Q ss_pred             hhhHHHHHHHhhhhCC-C-CCCccCHHHHHHHHHhc--CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          220 GEETQALKEKFIEMDT-D-KNGTLSYDELRAGLTKV--GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~-~-~~g~i~~~eL~~~l~~~--~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+....+..+|..+|. + ..|+|+..||+.+++..  +..++.++++.+++.+|.|+||.|+|+||+..+.
T Consensus         3 e~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~   74 (78)
T d1cb1a_           3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK   74 (78)
T ss_dssp             SCCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            3456788999999864 3 45899999999999986  3455677799999999999999999999998764

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.60  E-value=1e-08  Score=76.18  Aligned_cols=74  Identities=16%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             cHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHH
Q 042392          294 RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEF  373 (436)
Q Consensus       294 ~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF  373 (436)
                      ....+..+|+.|| +++|.|+..||...+...      +.....      .....++..+.++++.+|.|+||.|+|+||
T Consensus         8 ~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~------~~~~~~------~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF   74 (100)
T d1psra_           8 SIIGMIDMFHKYT-RRDDKIDKPSLLTMMKEN------FPNFLS------ACDKKGTNYLADVFEKKDKNEDKKIDFSEF   74 (100)
T ss_dssp             HHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHH------CHHHHH------HHHHTTCCGGGTHHHHHCTTCSSCBCHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCcccHHHHHHHHHHH------cccccc------ccccCCHHHHHHHHHHhcCCCCCcCcHHHH
Confidence            3456778888886 789999999997664332      110000      011223345899999999999999999999


Q ss_pred             HHHHHhh
Q 042392          374 VNLMTDI  380 (436)
Q Consensus       374 ~~~~~~~  380 (436)
                      +.++...
T Consensus        75 ~~li~~l   81 (100)
T d1psra_          75 LSLLGDI   81 (100)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.60  E-value=1.1e-07  Score=84.00  Aligned_cols=143  Identities=15%  Similarity=0.141  Sum_probs=96.7

Q ss_pred             cccceeeeeeecccCCeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeeceeeeecCCeE
Q 042392           23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAV  102 (436)
Q Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~  102 (436)
                      ..+.|++.+..+-++.+.||+..  ..+..+.+|........    ....+.+|...++.++.+--+++++.+....+..
T Consensus        12 ~~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~----~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_          12 LIEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             hhhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc----chhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            45678888876666678999986  45667888877544321    1234678999998886665578888888888999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 042392          103 HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS-------------------------------------  145 (436)
Q Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-------------------------------------  145 (436)
                      |+||++++|.++.+....     ......+..++...+..||+                                     
T Consensus        86 ~lv~~~l~G~~~~~~~~~-----~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          86 NLLMSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEEECCSSEEHHHHTTT-----CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEEEecccccccccccc-----cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            999999998776543211     11112223333333333332                                     


Q ss_pred             ----------------------cCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          146 ----------------------MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       146 ----------------------~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                                            ..++|+|+.|.||++   +.++.+-|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~---~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEE---ETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceee---cCCceEEEeechhccc
Confidence                                  126899999999999   4555567999998864

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.60  E-value=4.3e-08  Score=72.25  Aligned_cols=69  Identities=13%  Similarity=0.234  Sum_probs=57.2

Q ss_pred             hhHHHHHHHhhhh-CCCCC-CccCHHHHHHHHHhcCC--CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 042392          221 EETQALKEKFIEM-DTDKN-GTLSYDELRAGLTKVGS--MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQR  289 (436)
Q Consensus       221 e~~~~l~~~F~~~-D~~~~-g~i~~~eL~~~l~~~~~--~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~~  289 (436)
                      +.+..+..+|..+ |.+++ |+|+..||+..++..+.  ..+.+.++.+++.+|.|+||.|+|+||+..+...
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3466788899887 67764 99999999999998643  3466679999999999999999999999887543

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.4e-08  Score=75.43  Aligned_cols=68  Identities=22%  Similarity=0.200  Sum_probs=54.1

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++.+.++++|+.+|+|++|+|+..++..++              .+.|+..       +++.++++.+|.|++|.|+++
T Consensus        18 ~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l--------------~~s~L~~-------~~L~~Iw~l~D~d~dG~l~~~   76 (110)
T d1iq3a_          18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFF--------------TKSKLSI-------PELSYIWELSDADCDGALTLP   76 (110)
T ss_dssp             SSSHHHHHHHHHHHCCSSSSEEEHHHHHHHC--------------CSSSCSS-------CCHHHHHHHHCSSSCSEEEHH
T ss_pred             HHHHHHHHHHHHHhCCCcccchhHHHHHHHH--------------Hhhccch-------HHHHHHHHHhccCCCCeECHH
Confidence            4456788999999999999999998886552              2234432       358999999999999999999


Q ss_pred             HHHHHHHhh
Q 042392          372 EFVNLMTDI  380 (436)
Q Consensus       372 EF~~~~~~~  380 (436)
                      ||+.+|.-+
T Consensus        77 EF~~am~Li   85 (110)
T d1iq3a_          77 EFCAAFHLI   85 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999877543

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=74.22  Aligned_cols=66  Identities=20%  Similarity=0.177  Sum_probs=51.7

Q ss_pred             hccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       292 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      .++...++++|+.+| +++|+|+..|+..+              +.+.|+       +.+++.+|++.+|.|++|.|+|+
T Consensus         6 ~ee~~~y~~~F~~~D-~~~G~i~~~el~~~--------------l~~~gl-------~~~~L~~Iw~~~D~~~dG~l~~~   63 (95)
T d2jxca1           6 PEDKAKYDAIFDSLS-PVNGFLSGDKVKPV--------------LLNSKL-------PVDILGRVWELSDIDHDGMLDRD   63 (95)
T ss_dssp             HHHHHHHHHHHHHTC-CBTTEEEHHHHHHH--------------HTTSSC-------CHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             HHHHHHHHHHHHHhC-CCCCceeHHHHHHH--------------HHHcCC-------CHHHHHHHHHHhcCCCCCeEcHH
Confidence            344567899999999 89999999998654              222233       33479999999999999999999


Q ss_pred             HHHHHHHh
Q 042392          372 EFVNLMTD  379 (436)
Q Consensus       372 EF~~~~~~  379 (436)
                      ||+.++.-
T Consensus        64 EF~~a~~L   71 (95)
T d2jxca1          64 EFAVAMFL   71 (95)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99876653

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.54  E-value=1.1e-07  Score=69.01  Aligned_cols=68  Identities=21%  Similarity=0.283  Sum_probs=57.7

Q ss_pred             hhHHHHHHHhhhh-CCCCCC-ccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          221 EETQALKEKFIEM-DTDKNG-TLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       221 e~~~~l~~~F~~~-D~~~~g-~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +.+..+..+|..+ |.+++| +|+..||+..++..     +...+..+++.+++.+|.|+||.|+|+||+..+..
T Consensus         6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~   80 (93)
T d1ksoa_           6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   80 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            3456778899887 899888 59999999999874     34567899999999999999999999999987654

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.7e-08  Score=75.08  Aligned_cols=68  Identities=24%  Similarity=0.290  Sum_probs=62.2

Q ss_pred             CChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       218 l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +++++...+..+|..+|++.+|.|+.+++...+.+.+  ++..++..+|+..|.|++|.|+++||+.++.
T Consensus        16 lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            5888999999999999999999999999999988776  5667899999999999999999999998764

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.50  E-value=6.5e-08  Score=69.66  Aligned_cols=68  Identities=24%  Similarity=0.371  Sum_probs=57.9

Q ss_pred             hhHHHHHHHhhhh-CCCCCC-ccCHHHHHHHHHh---cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          221 EETQALKEKFIEM-DTDKNG-TLSYDELRAGLTK---VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       221 e~~~~l~~~F~~~-D~~~~g-~i~~~eL~~~l~~---~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ..+..+..+|..+ |++++| +++..||+..++.   .+...++++++.+++.+|.|+||.|+|+||+..+..
T Consensus         6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_           6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            3456778889887 888888 6999999999987   455678889999999999999999999999987643

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.48  E-value=6.3e-08  Score=51.92  Aligned_cols=30  Identities=37%  Similarity=0.639  Sum_probs=27.1

Q ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          386 PELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       386 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      ++++...|+.||+|+||+|+.+||..+++.
T Consensus         3 EeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           3 EEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            578999999999999999999999998864

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.43  E-value=9.1e-08  Score=68.65  Aligned_cols=68  Identities=15%  Similarity=0.259  Sum_probs=56.8

Q ss_pred             hhHHHHHHHhhhh-CCCCCCc-cCHHHHHHHHHh-cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          221 EETQALKEKFIEM-DTDKNGT-LSYDELRAGLTK-VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       221 e~~~~l~~~F~~~-D~~~~g~-i~~~eL~~~l~~-~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +.+..+..+|..+ |++++|. ++.+||+..+.. ++..++..+++.+++..|.|+||+|+|+||+..+..
T Consensus         7 ~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~   77 (87)
T d1xk4a1           7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3456677888777 8888885 589999999876 676677778999999999999999999999988753

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.43  E-value=3.7e-08  Score=55.47  Aligned_cols=29  Identities=31%  Similarity=0.476  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHhCCCCCCchhhhhhhcCcc
Q 042392          295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQ  323 (436)
Q Consensus       295 ~~~l~~~F~~~D~~~~G~i~~~el~~~~~  323 (436)
                      .++++++|+.||+||+|+|+..||+.++.
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~   30 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMT   30 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            46899999999999999999999977643

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.39  E-value=7.7e-07  Score=63.43  Aligned_cols=67  Identities=19%  Similarity=0.267  Sum_probs=54.6

Q ss_pred             hHHHHHHHhhhh-CCCCCC-ccCHHHHHHHHHhc-----CCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          222 ETQALKEKFIEM-DTDKNG-TLSYDELRAGLTKV-----GSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       222 ~~~~l~~~F~~~-D~~~~g-~i~~~eL~~~l~~~-----~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+..+..+|..+ +.++++ .++..||+..++..     +...+++.++.+++.+|.|+||.|+|+||+..+..
T Consensus         6 ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_           6 HLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            456678889887 555554 69999999999873     34557889999999999999999999999987643

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=3.2e-07  Score=67.69  Aligned_cols=61  Identities=23%  Similarity=0.363  Sum_probs=54.9

Q ss_pred             HHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       225 ~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      .+..+|..+|.+.+|.|+.+|+..++...+  ++..++..+|+..|.|++|.|+++||..++.
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            456889999999999999999999999876  6889999999999999999999999988764

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=3.1e-07  Score=67.78  Aligned_cols=61  Identities=13%  Similarity=0.196  Sum_probs=54.6

Q ss_pred             HHHHHHHccccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       352 ~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      ..+++|+.+|.|++|.|+.+|+..++...  ..+.+.+..+|+..|.|++|.|+.+||..+|.
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s--~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHc--CCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            36689999999999999999999998753  35788999999999999999999999998775

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.30  E-value=2.3e-07  Score=68.62  Aligned_cols=68  Identities=12%  Similarity=0.149  Sum_probs=55.6

Q ss_pred             hhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCC-------CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-------MLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       220 ~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~-------~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      ++.+..+..+|..++ +.+|.|+..||..+++...+       +.+...++.+|+.+|.|+||.|+|+||+..+..
T Consensus         6 E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   80 (100)
T d1psra_           6 ERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            345667788888887 67899999999999998542       234556899999999999999999999987754

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.6e-07  Score=68.91  Aligned_cols=74  Identities=14%  Similarity=0.146  Sum_probs=53.1

Q ss_pred             CCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHc------CCCCCcccHHHHHHHHHhhhhhc--cHHHHHHHHHHhCCC
Q 042392          237 KNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD------MDGNGAIDYTEFTAATIQRQKLE--RSEYLSKAFQYFDKD  308 (436)
Q Consensus       237 ~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d------~d~~g~i~~~EF~~~~~~~~~~~--~~~~l~~~F~~~D~~  308 (436)
                      ..+.+++++|....+...  ++..+|..+++.+.      .+++|.|++++|...+.......  ......++|+.||+|
T Consensus         4 ~~s~l~p~~l~~L~~~T~--fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~   81 (118)
T d1tuza_           4 ERGLISPSDFAQLQKYME--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETG   81 (118)
T ss_dssp             CCSCSCHHHHHHHHHHHH--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCC
T ss_pred             ccCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccc
Confidence            345688888888766543  56667888888873      24688999999998876554332  345678899999999


Q ss_pred             CCCc
Q 042392          309 NSGY  312 (436)
Q Consensus       309 ~~G~  312 (436)
                      +++.
T Consensus        82 ~d~~   85 (118)
T d1tuza_          82 HCLN   85 (118)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            8865

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.07  E-value=1.7e-06  Score=61.80  Aligned_cols=74  Identities=20%  Similarity=0.339  Sum_probs=50.9

Q ss_pred             cHHHHHHHHHHh-CCCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYF-DKDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+..+|+.| .++|+ ++++..||++.+.      ..++.    + +   .....+..++++++.+|.|+||.|+|+
T Consensus         7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~------~El~~----~-l---~~~~d~~~~d~~m~~LD~n~Dg~vdF~   72 (90)
T d3cr5x1           7 AVVALIDVFHQYSGREGDKHKLKKSELKELIN------NELSH----F-L---EEIKEQEVVDKVMETLDSDGDGECDFQ   72 (90)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHH------HHCTT----T-S---CCCCSHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHH------HHHHH----H-h---cCCCCHHHHHHHHHHhcCCCCCcCCHH
Confidence            345688899988 56666 4788888865421      11111    1 1   111233469999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++..+.
T Consensus        73 EF~~li~~la   82 (90)
T d3cr5x1          73 EFMAFVAMIT   82 (90)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.05  E-value=1.1e-05  Score=70.30  Aligned_cols=80  Identities=10%  Similarity=0.051  Sum_probs=53.6

Q ss_pred             ceeeeeeecccC-CeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-CCeeeceeeeecCCeEE
Q 042392           26 HYSFGRMLGRGR-FGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-PNIVELKSAHEDETAVH  103 (436)
Q Consensus        26 ~y~~~~~lg~G~-~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~~~~~~~~~~~  103 (436)
                      .+++... ..|. -+.||+... ..+..+.+|.......       ..+.+|...++.|..+ -.+++++.+..+++..+
T Consensus        12 g~~~~~~-~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~-------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~   82 (255)
T d1nd4a_          12 GYDWAQQ-TIGCSDAAVFRLSA-QGRPVLFVKTDLSGAL-------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   82 (255)
T ss_dssp             TCEEEEC-SCTTSSCEEEEEEC-TTSCCEEEEEECSCTT-------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             CCceEEc-CCcccCCeEEEEEe-CCCCEEEEEeCCccCH-------hHHHHHHHHHHHHHhcCCCCCceeeecccccceE
Confidence            3444333 4444 468999874 4566788887654322       2366788888777532 33677888888888999


Q ss_pred             EEEeccCCCCh
Q 042392          104 VVMELCQGGDL  114 (436)
Q Consensus       104 iv~e~~~~g~L  114 (436)
                      +||++++|.++
T Consensus        83 ~v~~~i~G~~~   93 (255)
T d1nd4a_          83 LLLGEVPGQDL   93 (255)
T ss_dssp             EEEECCSSEET
T ss_pred             EEEEeeecccc
Confidence            99999987554

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.03  E-value=2.4e-06  Score=61.55  Aligned_cols=74  Identities=22%  Similarity=0.320  Sum_probs=50.9

Q ss_pred             cHHHHHHHHHHh-CCCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYF-DKDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+..+|..| .++|+ ++++..||+..+..  ++...+            ........++++++.+|.|+||.|+|+
T Consensus         7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~--El~~~l------------~~~~d~~~vd~im~~LD~n~Dg~vdF~   72 (95)
T d1qlsa_           7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNT--ELAAFT------------QNQKDPGVLDRMMKKLDLDSDGQLDFQ   72 (95)
T ss_dssp             HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTT--TSHHHH------------HHCCCTHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHH--HHHHHh------------cCCCCHHHHHHHHHHhcCCCCCcCcHH
Confidence            345678899887 45676 57999998765221  111111            111123469999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++..+.
T Consensus        73 EF~~li~~la   82 (95)
T d1qlsa_          73 EFLNLIGGLA   82 (95)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887654

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.00  E-value=2e-05  Score=56.09  Aligned_cols=67  Identities=25%  Similarity=0.381  Sum_probs=52.6

Q ss_pred             hHHHHHHHhhhh-CCCCC-CccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          222 ETQALKEKFIEM-DTDKN-GTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       222 ~~~~l~~~F~~~-D~~~~-g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      .+..+-.+|..+ +.+++ +.++..||+..+++     ++.......++.+++.+|.|+||.|+|+||+..+..
T Consensus         7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~   80 (90)
T d3cr5x1           7 AVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   80 (90)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            345667788776 44443 57999999999987     334456778999999999999999999999877643

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.97  E-value=7.9e-06  Score=76.25  Aligned_cols=82  Identities=12%  Similarity=0.039  Sum_probs=49.6

Q ss_pred             eeeecccCCeEEEEEEECCCCceEEEEEeecCCcc---chhhHHHHHHHHHHHHHhcCCC--CCeeeceeeeecCCeEEE
Q 042392           30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM---KYAENDMMIRREIQIRRLLSGQ--PNIVELKSAHEDETAVHV  104 (436)
Q Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~i  104 (436)
                      .+.||.|....||++.+..+++.+++|.-......   ..+....+..+|...|+.+..+  ..+++++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            45689999999999987777888999965321100   0011123456788888877433  345556654  3444578


Q ss_pred             EEeccCCCC
Q 042392          105 VMELCQGGD  113 (436)
Q Consensus       105 v~e~~~~g~  113 (436)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997644

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.85  E-value=1.7e-05  Score=55.38  Aligned_cols=73  Identities=18%  Similarity=0.270  Sum_probs=48.7

Q ss_pred             cHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+..+|..|. ++|+ ++++..||++.+..      .++.    + +.  .+...+..++++++.+|.|+||.|+|+
T Consensus         8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~------El~~----~-l~--~~~~d~~~vd~~m~~LD~n~Dg~vdF~   74 (83)
T d1xk4c1           8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRK------DLQN----F-LK--KENKNEKVIEHIMEDLDTNADKQLSFE   74 (83)
T ss_dssp             HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHH------HTTT----T-TT--TGGGCHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHH------HhHH----H-hc--CCCCCHHHHHHHHHHhcCCCCCcCcHH
Confidence            3456788898884 4554 57888888654211      1111    1 11  122234468999999999999999999


Q ss_pred             HHHHHHHh
Q 042392          372 EFVNLMTD  379 (436)
Q Consensus       372 EF~~~~~~  379 (436)
                      ||+.++..
T Consensus        75 EF~~li~~   82 (83)
T d1xk4c1          75 EFIMLMAR   82 (83)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99987753

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=97.74  E-value=9.6e-06  Score=58.24  Aligned_cols=74  Identities=18%  Similarity=0.279  Sum_probs=49.0

Q ss_pred             cHHHHHHHHHHhC-CCCC-CchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHH
Q 042392          294 RSEYLSKAFQYFD-KDNS-GYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI  371 (436)
Q Consensus       294 ~~~~l~~~F~~~D-~~~~-G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~  371 (436)
                      ....+..+|..|. ++|+ ++++..||++.          +...+..+ +   ........++++++.+|.|+||.|+|+
T Consensus         7 ai~~ii~vFhkYa~~~g~~~tLsk~Elk~L----------l~~El~~~-l---~~~~d~~~vd~~m~~LD~n~Dg~vdF~   72 (94)
T d1j55a_           7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVL----------MEKELPGF-L---QSGKDKDAVDKLLKDLDANGDAQVDFS   72 (94)
T ss_dssp             HHHHHHHHHHHHTTSSSCTTEECHHHHHHH----------HHHHSTTC-C---------CHHHHHHHHHCSSSSSSEEHH
T ss_pred             HHHHHHHHHHHHcccCCCcccCCHHHHHHH----------HHHHHHHH-h---cCCCCHHHHHHHHHHhcCCCCCcCCHH
Confidence            4456888999984 5555 47888888654          22111111 1   112223359999999999999999999


Q ss_pred             HHHHHHHhhh
Q 042392          372 EFVNLMTDIY  381 (436)
Q Consensus       372 EF~~~~~~~~  381 (436)
                      ||+.++..+.
T Consensus        73 EF~~li~~la   82 (94)
T d1j55a_          73 EFIVFVAAIT   82 (94)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887643

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=97.73  E-value=3.6e-05  Score=55.14  Aligned_cols=66  Identities=21%  Similarity=0.344  Sum_probs=48.6

Q ss_pred             HHHHHHHhhhhC-CCCC-CccCHHHHHHHHHh-cC----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          223 TQALKEKFIEMD-TDKN-GTLSYDELRAGLTK-VG----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       223 ~~~l~~~F~~~D-~~~~-g~i~~~eL~~~l~~-~~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +..+-.+|..+- .+++ +.++..||+..+.+ ++    .+.....++.+++.+|.|+||.|+|+||+..+..
T Consensus         8 i~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   80 (94)
T d1j55a_           8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (94)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            455667887763 3333 58999999999987 33    2334567999999999999999999999987643

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.3e-05  Score=60.69  Aligned_cols=68  Identities=10%  Similarity=0.161  Sum_probs=52.2

Q ss_pred             hHHHHHHHHHccc------cCCCCcccHHHHHHHHHhhhccC--CHHHHHHHHHhhccCCC--------CcccHHHHHHH
Q 042392          349 AMNMLKKLVLQGD------IDGNGNIDFIEFVNLMTDIYKLE--TPELLEKAFQYLDKNSD--------QFITVNELETA  412 (436)
Q Consensus       349 ~~~~~~~~~~~~d------~~~~g~i~f~EF~~~~~~~~~~~--~~~~~~~~F~~~D~d~~--------G~I~~~el~~~  412 (436)
                      +..+|.++.+.+.      ...+|.|++++|..++.......  ...-.+++|+.||+|++        |.|++.||...
T Consensus        23 s~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~  102 (118)
T d1tuza_          23 STKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCY  102 (118)
T ss_dssp             CCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHH
T ss_pred             CHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHH
Confidence            3445666666652      24689999999999988765543  24568899999999976        99999999998


Q ss_pred             HHhC
Q 042392          413 FKEN  416 (436)
Q Consensus       413 l~~~  416 (436)
                      |.-+
T Consensus       103 LS~l  106 (118)
T d1tuza_         103 FSLL  106 (118)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=97.69  E-value=3.8e-05  Score=55.08  Aligned_cols=66  Identities=20%  Similarity=0.260  Sum_probs=51.2

Q ss_pred             HHHHHHHhhhh-CCCCC-CccCHHHHHHHHHh-----cCCCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 042392          223 TQALKEKFIEM-DTDKN-GTLSYDELRAGLTK-----VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQ  288 (436)
Q Consensus       223 ~~~l~~~F~~~-D~~~~-g~i~~~eL~~~l~~-----~~~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~~  288 (436)
                      +..+-.+|..+ ..+++ +.++..||+..+.+     ++..-....++.+++.+|.|+||.|+|+||+..+..
T Consensus         8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~   80 (95)
T d1qlsa_           8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   80 (95)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            44556777765 34443 57999999999886     334456678999999999999999999999877643

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.60  E-value=4.8e-05  Score=40.60  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=27.2

Q ss_pred             hHHHHHHHHHccccCCCCcccHHHHHHHHH
Q 042392          349 AMNMLKKLVLQGDIDGNGNIDFIEFVNLMT  378 (436)
Q Consensus       349 ~~~~~~~~~~~~d~~~~g~i~f~EF~~~~~  378 (436)
                      +++++.+.|+-+|+|.||.|+.+||..++.
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr   31 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILR   31 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHH
Confidence            567899999999999999999999998765

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.46  E-value=0.00028  Score=48.99  Aligned_cols=65  Identities=17%  Similarity=0.285  Sum_probs=48.5

Q ss_pred             HHHHHHHhhhhCC-CC-CCccCHHHHHHHHHh-cCCC-----CCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          223 TQALKEKFIEMDT-DK-NGTLSYDELRAGLTK-VGSM-----LTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       223 ~~~l~~~F~~~D~-~~-~g~i~~~eL~~~l~~-~~~~-----~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      +..+-.+|..+-. ++ .+.++..||+..+++ ++..     -....++.+++.+|.|+||.|+|+||+..+.
T Consensus         9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   81 (83)
T d1xk4c1           9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA   81 (83)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence            3455677766632 22 358999999999987 4322     2445689999999999999999999997653

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.08  E-value=0.00082  Score=62.18  Aligned_cols=84  Identities=14%  Similarity=0.053  Sum_probs=54.3

Q ss_pred             ccccccceeeeeeecccCCeEEEEEEECC-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCCCCeeec
Q 042392           20 YEDVMLHYSFGRMLGRGRFGVTYLCTENS-------TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL   92 (436)
Q Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   92 (436)
                      |+.+...---++.|+.|-.-.+|++....       ....|.+++.....      ......+|..+++.++.+.-.+++
T Consensus        37 W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~------~~idr~~E~~i~~~ls~~gl~Pkl  110 (395)
T d1nw1a_          37 WKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE------TESHLVAESVIFTLLSERHLGPKL  110 (395)
T ss_dssp             HHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC------CHHHHHHHHHHHHHHHHTTSSSCE
T ss_pred             ccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc------hhhHHHHHHHHHHHHHhCCCCCeE
Confidence            43333333335678888888999998653       23557777654221      122456899999988766555678


Q ss_pred             eeeeecCCeEEEEEeccCCCC
Q 042392           93 KSAHEDETAVHVVMELCQGGD  113 (436)
Q Consensus        93 ~~~~~~~~~~~iv~e~~~~g~  113 (436)
                      ++++..    .+|+||++|..
T Consensus       111 l~~~~~----g~I~efi~g~~  127 (395)
T d1nw1a_         111 YGIFSG----GRLEEYIPSRP  127 (395)
T ss_dssp             EEEETT----EEEECCCCEEE
T ss_pred             EEEcCC----ceEEEEecccc
Confidence            887753    57899998743

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0027  Score=56.88  Aligned_cols=69  Identities=12%  Similarity=0.024  Sum_probs=44.3

Q ss_pred             CeEEEEEEECCCCceEEEEEeecCCccchhhHHHHHHHHHHHHHhcCCC-CCeeece-----eeeecCCeEEEEEeccCC
Q 042392           38 FGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ-PNIVELK-----SAHEDETAVHVVMELCQG  111 (436)
Q Consensus        38 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~niv~~~-----~~~~~~~~~~iv~e~~~~  111 (436)
                      --.||++.. .+|..|++|+.+...     .....+..|...+..|..+ .-++...     ..+...+..+.++++++|
T Consensus        35 EN~vy~v~~-~dg~~~VlK~~rp~~-----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          35 ENRVYQFQD-EDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             SSEEEEECC-TTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             cceeEEEEc-CCCCEEEEEEeCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            358999985 578899999875432     1235677888888877522 1112111     123456678999999976


Q ss_pred             C
Q 042392          112 G  112 (436)
Q Consensus       112 g  112 (436)
                      .
T Consensus       109 ~  109 (325)
T d1zyla1         109 R  109 (325)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0012  Score=51.11  Aligned_cols=63  Identities=13%  Similarity=0.155  Sum_probs=46.7

Q ss_pred             HHHHHHHHhCCC-CCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHccccCCCCcccHHHHHH
Q 042392          297 YLSKAFQYFDKD-NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVN  375 (436)
Q Consensus       297 ~l~~~F~~~D~~-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~i~f~EF~~  375 (436)
                      -+..-|..+|.| +||.++.+|+......+               +..      +.-+...++..|.|+||.|++.||..
T Consensus        78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L---------------~~~------e~C~~~F~~~CD~n~D~~Is~~EW~~  136 (151)
T d1sraa_          78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL---------------IPM------EHCTTRFFETCDLDNDKYIALDEWAG  136 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTT---------------STT------GGGHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             cceeehhhcCCCCCCCccCHHHHHHHHHhh---------------cCC------chHHHHHHHHhcCCCCCcCCHHHHHH
Confidence            366779999999 59999999996642111               111      11377888999999999999999998


Q ss_pred             HHHhh
Q 042392          376 LMTDI  380 (436)
Q Consensus       376 ~~~~~  380 (436)
                      .+...
T Consensus       137 Cf~v~  141 (151)
T d1sraa_         137 CFGIK  141 (151)
T ss_dssp             HTTCC
T ss_pred             HcCCC
Confidence            77643

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.001  Score=51.36  Aligned_cols=61  Identities=18%  Similarity=0.231  Sum_probs=49.7

Q ss_pred             HHHHHHHccccC-CCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          352 MLKKLVLQGDID-GNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       352 ~~~~~~~~~d~~-~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      -+...|.++|.| +||.|+..|...+...+..  .+..++..|+.-|.|+||.||..|+...|.
T Consensus        78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~--~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~  139 (151)
T d1sraa_          78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIP--MEHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTST--TGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             cceeehhhcCCCCCCCccCHHHHHHHHHhhcC--CchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence            477899999999 5999999998886543322  234588888999999999999999998773

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.73  E-value=0.02  Score=50.54  Aligned_cols=31  Identities=35%  Similarity=0.413  Sum_probs=26.2

Q ss_pred             cCcccccCCCCcceeeccCCCCcEEEEecCCccc
Q 042392          146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL  179 (436)
Q Consensus       146 ~~i~Hrdlkp~Nill~~~~~~~~~kl~DFG~a~~  179 (436)
                      .|+||+|+.+.|+++   +.+...-++||+.|..
T Consensus       183 ~giIHgDl~~dNvl~---~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFF---LGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEE---ETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhc---ccccceeEeccccccc
Confidence            579999999999999   5555668999999864

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=94.03  E-value=0.3  Score=30.54  Aligned_cols=73  Identities=21%  Similarity=0.222  Sum_probs=59.9

Q ss_pred             cCChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHHc-CCCC-CcccHHHHHHHHHhh
Q 042392          217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD-MDGN-GAIDYTEFTAATIQR  289 (436)
Q Consensus       217 ~l~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~~~~s~~~i~~l~~~~d-~d~~-g~i~~~EF~~~~~~~  289 (436)
                      .+++++.+....+|..||.+....-...+-..++.++|...+..+.+.+++..- ..++ ..|.-+|.+..+...
T Consensus         7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw   81 (86)
T d1j7qa_           7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW   81 (86)
T ss_dssp             CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred             ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999999999988752 2222 357778877665543

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=91.73  E-value=0.3  Score=30.49  Aligned_cols=46  Identities=15%  Similarity=0.260  Sum_probs=39.6

Q ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCC-ChHHHHHHHHhh
Q 042392          386 PELLEKAFQYLDKNSDQFITVNELETAFKENNMG-DDATIKEIISEV  431 (436)
Q Consensus       386 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~-~~~e~~~~~~~~  431 (436)
                      .++..++|..||.|....-.+.+-..+|+.+|.. +..|.+.+++++
T Consensus        13 kdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkea   59 (86)
T d1j7qa_          13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA   59 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHh
Confidence            3567789999999999998999999999999888 888888888876

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.18  E-value=0.24  Score=34.61  Aligned_cols=63  Identities=6%  Similarity=0.089  Sum_probs=50.0

Q ss_pred             HHHHHHHccccCCCCcccHHHHHHHHHhhhcc--CCHHHHHHHHHhhccCC----CCcccHHHHHHHHHh
Q 042392          352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL--ETPELLEKAFQYLDKNS----DQFITVNELETAFKE  415 (436)
Q Consensus       352 ~~~~~~~~~d~~~~g~i~f~EF~~~~~~~~~~--~~~~~~~~~F~~~D~d~----~G~I~~~el~~~l~~  415 (436)
                      +|..+|..+-.+ .+.++.++|..++......  .+.+..+.+|..|..+.    .|.+|.+.|...|.+
T Consensus         9 ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1           9 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             HHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             HHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            588999888544 4689999999999876542  45667889999996653    488999999999865

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.02  E-value=0.26  Score=31.00  Aligned_cols=52  Identities=17%  Similarity=0.273  Sum_probs=39.5

Q ss_pred             ccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHH
Q 042392          361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFK  414 (436)
Q Consensus       361 d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~  414 (436)
                      |.|+||.|+......+...........  ...|..-|.|+||.|+.-++..+.+
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~--~~~~~aaDvn~Dg~i~i~D~~~l~~   53 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLT--DDAKARADVDKNGSINAADVLLLSR   53 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCC--HHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCC--hhhhhccccCCCCCCCHHHHHHHHH
Confidence            779999999999998876654433221  2356778999999999999887764

>d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Hypothetical protein c32e8.3
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.97  E-value=0.86  Score=32.02  Aligned_cols=68  Identities=7%  Similarity=0.065  Sum_probs=53.3

Q ss_pred             ChhhHHHHHHHhhhhCCCCCCccCHHHHHHHHHhcC----CCCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 042392          219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG----SMLTEFDVKQLMEAADMDGNGAIDYTEFTAATI  287 (436)
Q Consensus       219 ~~e~~~~l~~~F~~~D~~~~g~i~~~eL~~~l~~~~----~~~s~~~i~~l~~~~d~d~~g~i~~~EF~~~~~  287 (436)
                      ...++...-..|..+...+...++...+.++++..+    ..++...++.+|...-.. ..+|+|++|..++.
T Consensus         3 ~~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k-~~ri~f~~F~~aL~   74 (103)
T d1pula1           3 DDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGP-KKKATFDETKKVLA   74 (103)
T ss_dssp             CHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCS-SSCCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCC-CCCcCHHHHHHHHH
Confidence            345666777788888865555799999999999843    469999999999998544 45799999988764

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.33  E-value=0.27  Score=32.09  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=34.0

Q ss_pred             CCHHHHHHHHHhhccCCCCcccHHHHHHHHHhCCCCChHHHHHHHHhh
Q 042392          384 ETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEV  431 (436)
Q Consensus       384 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~e~~~~~~~~  431 (436)
                      .+.+.+..+|+.. .++..+||.+||++-|      +.++++.++...
T Consensus         5 ~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L------~peqaeyc~~~M   45 (73)
T d1h8ba_           5 DTAEQVIASFRIL-ASDKPYILAEELRREL------PPDQAQYCIKRM   45 (73)
T ss_dssp             STHHHHHHHHHHH-TTSCSSBCHHHHHHHS------CHHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHH-hCCCCeeCHHHHHhhc------CHHHHHHHHHHC
Confidence            4678899999999 6789999999999876      466788887754

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=88.97  E-value=0.07  Score=35.24  Aligned_cols=52  Identities=17%  Similarity=0.229  Sum_probs=39.1

Q ss_pred             cccCCCCcccHHHHHHHHHhhhccCCHHHHHHHHHhhccCCCCcccHHHHHHHHHh
Q 042392          360 GDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE  415 (436)
Q Consensus       360 ~d~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~  415 (436)
                      -|.|+||.|+..+...++..+........    +...|.|+||.|+..++..+.+-
T Consensus         7 GDvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l~~~   58 (71)
T d1dava_           7 GDVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGILKRY   58 (71)
T ss_dssp             SCSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHHHHH
T ss_pred             eccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHHHHH
Confidence            37899999999999888776654322211    22469999999999999887764

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.73  E-value=0.6  Score=32.38  Aligned_cols=48  Identities=17%  Similarity=0.203  Sum_probs=37.8

Q ss_pred             CHHHHHHHHHhhccCCCCcccHHHHHHHHHhC-CCC--ChHHHHHHHHhhcc
Q 042392          385 TPELLEKAFQYLDKNSDQFITVNELETAFKEN-NMG--DDATIKEIISEVGR  433 (436)
Q Consensus       385 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-~~~--~~~e~~~~~~~~d~  433 (436)
                      ...++..+|+.|= ++.+.+|.++|.++|... ++.  +++.+..+|....+
T Consensus         6 ~R~ei~~if~~ys-~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~   56 (94)
T d1qasa1           6 QRAEIDRAFEEAA-GSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEP   56 (94)
T ss_dssp             CCHHHHHHHHHHH-TTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCC
T ss_pred             ccHHHHHHHHHHh-CCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcc
Confidence            3568999999994 455789999999999873 444  77778999988754

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=1.1  Score=29.12  Aligned_cols=58  Identities=10%  Similarity=0.181  Sum_probs=40.4

Q ss_pred             ccHHHHHHHHHHhCCCCCCchhhhhhhcCcchhhhHHHHhhhhhhhcCCCCchhhhhHHHHHHHHHcccc----C-CCCc
Q 042392          293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDI----D-GNGN  367 (436)
Q Consensus       293 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~-~~g~  367 (436)
                      ++.+.+.++|+.+ .++..+|+..+|...                          ++.++++-.++.+-.    + ..|.
T Consensus         5 ~TaEqv~~aFr~l-A~~KpyVT~~dL~~~--------------------------L~peqaeyc~~~M~~y~~~~~~~~a   57 (73)
T d1h8ba_           5 DTAEQVIASFRIL-ASDKPYILAEELRRE--------------------------LPPDQAQYCIKRMPAYSGPGSVPGA   57 (73)
T ss_dssp             STHHHHHHHHHHH-TTSCSSBCHHHHHHH--------------------------SCHHHHHHHHHHSCSCCCSSCCTTC
T ss_pred             ccHHHHHHHHHHH-hCCCCeeCHHHHHhh--------------------------cCHHHHHHHHHHCcccCCCCCCCCc
Confidence            4567899999999 677899998888532                          223345555555432    2 3678


Q ss_pred             ccHHHHHHHH
Q 042392          368 IDFIEFVNLM  377 (436)
Q Consensus       368 i~f~EF~~~~  377 (436)
                      .+|..|...+
T Consensus        58 yDY~sF~~~l   67 (73)
T d1h8ba_          58 LDYAAFSSAL   67 (73)
T ss_dssp             BCHHHHHHHH
T ss_pred             ccHHHHHHHH
Confidence            9999998755