Citrus Sinensis ID: 042427

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MASTKLLTFFFPASLLLLSISPFGSSENVTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQPDGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVPIDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRSLPHNIPVNAESTSSVCYTGEGKN
cccHHHHHHHHHHHHHHHHcccccccccCEEEEEEEcccHHHHHHHHHHHHHHHHHcccccEEEEEEEEECcEEcccccEEEcccHHHHHccHHHHcccccccccccccccEEEEEEcHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHcccccccccEEEEEccCCcHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
**STKLLTFFFPASLLLLSISPFGSSENVTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQPDGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVPIDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRSLP*********************
xxxxxHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASTKLLTFFFPASLLLLSISPFGSSENVTVSVYYETLCPYCADFIVNHLVKLFQKGLNSIVNLRMIPWGNSMMQPDGTFVCQHGPGECLLNTIEACTISIYPDVVQHFSFIHCVERLALEKRQAEWINCFELTKLGRVPIDCYRNGLGKLLEQKYATETAQLKPPHRFVPWVVVNNQPLQEDFMNFANHVCKAYKGTGLPEACRSLPHNIPVNAESTSSVCYTGEGKN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Gamma-interferon-inducible lysosomal thiol reductase Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation. Plays an important role in antigen processing. Facilitates the generation of MHC class II-restricted epitodes from disulfide bond-containing antigen by the endocytic reduction of disulfide bonds. Facilitates also MHC class I-restricted recognition of exogenous antigens containing disulfide bonds by CD8+ T-cells or crosspresentation.probableQ499T2

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GL5, chain A
Confidence level:probable
Coverage over the Query: 30-197
View the alignment between query and template
View the model in PyMOL