Citrus Sinensis ID: 042575

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MDRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEcEEEEccccccccccccccccccHHHHHHHHHHHHHHcccEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHEcccccEEEccccEEEccEcccccccccccHHHHHHHHHHHHccEEEEcHccccc
Coil and Loop (DISEMBL)
mdrnnvtmcmkgcgfygskenknmcsKCYDDYLKAELIAKSSKLLDAAkksigptnapnpsvldkswppqwiisaakttntsnavdsrasnqttstiesgagssvkRRCEICNKKVGLIEFRcrcghlycgthrypkehactfdfkkfdremlvkdnpliradklegri
Flexible Loop (DISEMBL)
mdrnnvtmcmkgcgfygskenknMCSKCYDDYLKAELIAKSSKLLDAAKKSigptnapnpsvldkswpPQWIISAAkttntsnavdsrasnqttstiesgagssvkrrCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKkfdremlvkdnpliradklegri
Low Complexity Region (SEG)
MDRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAEliakssklldaakksiGPTNAPNPSVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI
Disordered region (IsUnstruct)
*****VTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAK**************************WPPQWIIS********************************RRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDN************
Disordered Region (DISOPRED)
*****VT**MKGCGFYGSKENKNMCSKCY***********SSKLLDAAKKSIGPTNAPNPS*L********************************************RCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEG**
Disordered Region (DISEMBL)
MDRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSWPPQWIISAAKTT**************************KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI
Disordered Region (DISPRO)
****NVTMCMKGCGFYGSKENKNMCSKCYDDYLKAE*********************************************************************KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
O49663	176	Zinc finger A20 and AN1 d	yes	no	0.911	0.875	0.358	3e-26
Q6NNI8	168	Zinc finger A20 and AN1 d	no	no	0.881	0.886	0.402	4e-26
Q6Z541	224	Zinc finger A20 and AN1 d	yes	no	0.840	0.633	0.424	1e-23
Q9SZ69	175	Zinc finger A20 and AN1 d	no	no	0.887	0.857	0.363	8e-23
Q9SJM6	161	Zinc finger A20 and AN1 d	no	no	0.840	0.881	0.370	1e-22
Q852K5	160	Zinc finger A20 and AN1 d	yes	no	0.798	0.843	0.341	2e-22
Q5JN07	355	Zinc finger A20 and AN1 d	no	no	0.846	0.402	0.346	2e-22
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.810	0.850	0.348	1e-21
Q9STJ9	130	Zinc finger A20 and AN1 d	no	no	0.704	0.915	0.354	1e-21
Q3EA33	125	Putative zinc finger A20	no	no	0.692	0.936	0.345	1e-20

>sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+KGCGF+GS  N ++CSKCY      E  A+++    A +KS  P+    P  L  + 
Sbjct: 21  LCVKGCGFFGSPSNMDLCSKCYRGICAEE--AQTAVAKAAVEKSFKPSP---PRSLFIAE 75

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
           PP  ++           V +  S+         +  +   RC  CNKKVG++ F+C+CG 
Sbjct: 76  PPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGS 135

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
            +CG HRYP+ H C+FDFK+  R  + K NP+++ADK++
Sbjct: 136 TFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

May be involved in environmental stress response.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NNI8|SAP1_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1

 Score =  117 bits (293), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 10/159 (6%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+KGCGF+GS  N N+CSKCY D    E    S+K   A +KS+ P N P         
Sbjct: 18  LCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKA--AVEKSLNP-NKPKTQPQQSQE 74

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
             Q ++ +  +++++   DS A+             S   RC  CNKKVG+  F+CRCG 
Sbjct: 75  ITQGVLGSGSSSSSTRGGDSAAAPLDPP-------KSTATRCLSCNKKVGVTGFKCRCGS 127

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
            +CGTHRYP+ H C FDFK   RE + K NP+++ADK++
Sbjct: 128 TFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z541|SAP12_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1

 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 88/158 (55%), Gaps = 16/158 (10%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C  GCGF+GSKE  NMCSKCY D+LKA     +S L  ++            S  D + 
Sbjct: 80  LCSSGCGFFGSKETNNMCSKCYRDHLKA-----TSPLFSSSSSPA------TASTTDITV 128

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
           P      A  TT  + ++  +    T +   S A ++   RC  C KKVGL+ F CRCG 
Sbjct: 129 P-----IAPATTAPTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGG 183

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
            +C THR+  +HACTFDFKK DRE + K+NPLI A K+
Sbjct: 184 TFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKI 221

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SZ69|SAP7_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1

 Score =  106 bits (264), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 15/165 (9%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAE----LIAKSSKLLDAAKKSIGPTNAPNPSVL 63
           +C  GCGF+GS  N N+CSKCY   L+AE     +AK+     A K S+     P+ S++
Sbjct: 18  LCDNGCGFFGSPSNMNLCSKCYRS-LRAEEDQTAVAKA-----AVKNSL---KLPSCSII 68

Query: 64  DKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVK--RRCEICNKKVGLIEF 121
                    I  A         +  +        E+     V+   RC  CNKKVG++ F
Sbjct: 69  APGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGF 128

Query: 122 RCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
           +C+CG  +CG+HRYP++H C+FDFK+  R+ + K NPL++ADK++
Sbjct: 129 KCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1

 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 20/162 (12%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDY-LKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKS 66
           +C+  CGF+GS    N+CS CY D  LK +   + + +    + S+ P  AP   VL+ +
Sbjct: 15  LCVNNCGFFGSSATMNLCSNCYGDLCLKQQ---QQASMKSTVESSLSPVIAP---VLE-N 67

Query: 67  WPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKR--RCEICNKKVGLIEFRCR 124
           +  +  I   K T     +           I +   S  +R  RC +C K+VGL  F CR
Sbjct: 68  YAAELEIPTTKKTEEKKPIQ----------IPTEQPSPPQRPNRCTVCRKRVGLTGFMCR 117

Query: 125 CGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
           CG  +CG+HRYP+ H CTFDFK   RE + K NPL+ A KL+
Sbjct: 118 CGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQ 159

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 23/158 (14%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+  CGF+GS+  +NMCSKCY D +KA+ +A   +    A  S  P             
Sbjct: 23  LCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTP------------- 69

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
               +++      + +  D +        +E         RC  C KKVGL  F+CRCG 
Sbjct: 70  ----LVTEVTDGGSGSVADGK------QVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGG 119

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
            +C  HRY   H CTFD+K+  RE + K NPL++ADK+
Sbjct: 120 TFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKI 157

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5JN07|SAP3_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 30/173 (17%)

Query: 7   TMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVL--- 63
            +C  GCGFYG+    +MCS CY  +           LL+ A  + GP+++   +     
Sbjct: 203 VLCASGCGFYGNPATLDMCSVCYRQHC----------LLNGATMATGPSSSVAAASAATV 252

Query: 64  -------DKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKV 116
                  D    P   ++ A       A  S+ + +  + +E  A ++   RC  C KKV
Sbjct: 253 ATGAVTSDSCSVPSAEVNGA-------AFSSKNNPEPATVVEKKAPAN---RCASCKKKV 302

Query: 117 GLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
           GL+ F CRCG  YCGTHRYP++HAC FDFK   R+ + + NPLI+ +KL  +I
Sbjct: 303 GLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 355

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 21/158 (13%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+  CGF+GS    NMCSKCY D++K   +A         KK+  P ++ + + L+ + 
Sbjct: 22  LCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPV----VEKKAFTPASS-SKTPLEPAK 76

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
           P +   +A +    +       SN                RC  C KKVGL  F+CRCG 
Sbjct: 77  PDEVPAAAVEDKQAAQEPPKPPSN----------------RCLSCRKKVGLTGFQCRCGG 120

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
            +C THRY + H CTFD+KK  R+ + K NP++ A+K+
Sbjct: 121 TFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9STJ9|SAP10_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 39/158 (24%)

Query: 9   CMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSWP 68
           C  GCG YG++ N N+CS CY   +     A   +      +   PTN+P          
Sbjct: 10  CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPALRFEPETEQSQCCPPTNSP---------- 59

Query: 69  PQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHL 128
                          AV+                   KRRC IC +KVG++ F+CRCGH+
Sbjct: 60  ---------------AVEEEPVK--------------KRRCGICKRKVGMLGFKCRCGHM 90

Query: 129 YCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
           +CG+HRYP+EH+C FD+K+  R  L    PLIRADKL+
Sbjct: 91  FCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQ 128

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3EA33|SAP8_ARATH Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 42/159 (26%)

Query: 7   TMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKS 66
           ++C++GCGF+ + + KN+CSKCY+D+LK E                              
Sbjct: 6   SLCIRGCGFFSTSQTKNLCSKCYNDFLKDE------------------------------ 35

Query: 67  WPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCG 126
                   +A+   T N V+++A+ + T+   +  GS  K  C  C KKVGL+ F CRCG
Sbjct: 36  --------SARYLATFN-VNTKAAEEVTAQEATVLGS--KGGCA-CKKKVGLLGFHCRCG 83

Query: 127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
           HL+  +HRYP+EH+C  D+K    ++L K NP+++ DKL
Sbjct: 84  HLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKL 122

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
224136822	147	predicted protein [Populus trichocarpa]	0.840	0.965	0.461	8e-32
224120194	147	predicted protein [Populus trichocarpa]	0.852	0.979	0.449	4e-31
255539675	166	zinc finger protein, putative [Ricinus c	0.798	0.813	0.455	7e-31
224134549	130	predicted protein [Populus trichocarpa]	0.769	1.0	0.452	2e-28
225455582	152	PREDICTED: zinc finger A20 and AN1 domai	0.869	0.967	0.423	6e-26
225455543	153	PREDICTED: zinc finger A20 and AN1 domai	0.869	0.960	0.380	9e-26
225423783	189	PREDICTED: zinc finger A20 and AN1 domai	0.875	0.783	0.380	2e-25
260816608	192	hypothetical protein BRAFLDRAFT_226485 [	0.958	0.843	0.375	8e-25
15235819	176	zinc finger A20 and AN1 domain-containin	0.911	0.875	0.358	1e-24
357512275	134	Zinc finger A20 and AN1 domain-containin	0.775	0.977	0.417	1e-24

>gi|224136822|ref|XP_002322424.1| predicted protein [Populus trichocarpa] gi|222869420|gb|EEF06551.1| predicted protein [Populus trichocarpa]

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 104/169 (61%), Gaps = 27/169 (15%)

Query: 2   DRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPT-NAPNP 60
           D+    +C KGCGF+GS ENKN+CSKCY DYLK E+IAK++  L  ++  I P+ +  NP
Sbjct: 5   DKLTPALCAKGCGFFGSPENKNLCSKCYKDYLKEEVIAKTADKL--SELVITPSSDDKNP 62

Query: 61  SVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIE 120
           +V+                  SN   S  +   ++T      + +K RCE C KKVGL+ 
Sbjct: 63  AVV------------------SNETASTTTATASAT------TVLKNRCECCGKKVGLMG 98

Query: 121 FRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
           F+CRCG  +CG HRY KEH+CTFDFK FDR++L K NPL+  DKL+ RI
Sbjct: 99  FKCRCGKTFCGVHRYAKEHSCTFDFKTFDRQILAKQNPLVAGDKLDARI 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120194|ref|XP_002318269.1| predicted protein [Populus trichocarpa] gi|222858942|gb|EEE96489.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 25/169 (14%)

Query: 1   MDRNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNP 60
           ++ + + +C KGCGF+GS EN+N CSKCY +YLK  LIA+ SK L              P
Sbjct: 4   INSSTLPLCAKGCGFFGSPENENFCSKCYKEYLKEGLIAEPSKKLS------------EP 51

Query: 61  SVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIE 120
            V+  S+               N+ D      T++T    + S VK RCE CNKKVGL+ 
Sbjct: 52  IVVTPSF-------------DDNSPDVVTDETTSTTTAVASTSKVKNRCECCNKKVGLMG 98

Query: 121 FRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
           F CRCG+ +CG HRYPKEH+CTFDFK  D++ L K NPL+  DKL  RI
Sbjct: 99  FECRCGNTFCGVHRYPKEHSCTFDFKTLDQQNLAKQNPLVAGDKLGSRI 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539675|ref|XP_002510902.1| zinc finger protein, putative [Ricinus communis] gi|223550017|gb|EEF51504.1| zinc finger protein, putative [Ricinus communis]

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 98/169 (57%), Gaps = 34/169 (20%)

Query: 1   MDRNNVTM----CMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTN 56
           MD  N ++    C +GCGF+GS EN+NMCSKCY DYLK E+IAK++             +
Sbjct: 1   MDSPNSSVTPPSCARGCGFFGSAENRNMCSKCYTDYLKQEIIAKTN-------------S 47

Query: 57  APNPSVLDKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSV---KRRCEICN 113
           AP PS    S               SN + +  + +  +  E     SV   K RCE CN
Sbjct: 48  APEPSPASNSL--------------SNKIATCINIKEAAAEEEETAKSVPVAKNRCESCN 93

Query: 114 KKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRA 162
           KKVG+  F CRCG + CGTHRYPKEH CTFDFK+ DR++LVK NPL++A
Sbjct: 94  KKVGVTGFACRCGKVLCGTHRYPKEHCCTFDFKRADRDLLVKQNPLVKA 142

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134549|ref|XP_002321850.1| predicted protein [Populus trichocarpa] gi|222868846|gb|EEF05977.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 91/159 (57%), Gaps = 29/159 (18%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C KGCGF+GS ENKN+CSKCY DYLK E   K S+L+              PS  DK+ 
Sbjct: 1   LCAKGCGFFGSPENKNLCSKCYKDYLKEETANKLSELV------------ITPSSGDKN- 47

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
             Q ++S    +  S    +               + +K RCE CNKKVGL+ F+CRCG 
Sbjct: 48  --QAVVSDETASTASTTASTS--------------TVLKNRCECCNKKVGLMGFKCRCGK 91

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
            +CG HRY KEH+CTFDFK +DR+ L K NPL+  DKL 
Sbjct: 92  TFCGVHRYAKEHSCTFDFKTYDRQNLAKQNPLVAGDKLH 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455582|ref|XP_002269276.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7 [Vitis vinifera] gi|296084115|emb|CBI24503.3| unnamed protein product [Vitis vinifera]

 Score =  122 bits (306), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 16/163 (9%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+ GCGF+G+   +N+CSKCY D+LK E  A  +K   + +K++G T A   SV D   
Sbjct: 5   LCVNGCGFFGTPATQNLCSKCYKDFLKEEEEAAKAKT-KSMEKAMGSTVASTSSVDD--- 60

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVK-RRCEICNKKVGLIEFRCRCG 126
                        TS    S +S  T  TI   + +  K  RCE C KKVG+I F+CRCG
Sbjct: 61  -----------VVTSMTQLSLSSENTKKTISDDSSTKKKVERCETCKKKVGIIGFKCRCG 109

Query: 127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
            ++C  HR P++H C+FD+K   RE+L K  PLI+ DKLEGR+
Sbjct: 110 SMFCAEHRLPEKHECSFDYKTMGREILKKQIPLIKPDKLEGRV 152

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455543|ref|XP_002267954.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 9-like [Vitis vinifera]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 16/163 (9%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C  GCGF+G+   +N+CSKCY D+LK E  +  +K++ + KK++GP      S+ D + 
Sbjct: 6   LCANGCGFFGTTATRNLCSKCYRDFLKEEEESTKTKVM-SMKKAMGPRVESTSSLDDVAT 64

Query: 68  P-PQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCG 126
              Q  +S   T  TSN   S                    +CE+C KK+G+I F+CRCG
Sbjct: 65  SMAQLSLSLDNTKKTSNGDPSTKMKS--------------EQCEMCKKKMGIIGFKCRCG 110

Query: 127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
            ++CG HR P++H C FD+K   RE+L K NP ++ +KL GR+
Sbjct: 111 SMFCGKHRLPEKHECNFDYKAMGREILRKQNPSLKPEKLPGRL 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423783|ref|XP_002277381.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7-like [Vitis vinifera]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 7   TMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKS 66
           T+C  GCGF+G+   +N+CSKCY D+LK E  +  +K + + KK+I P      S+ D  
Sbjct: 42  TLCANGCGFFGTPATQNLCSKCYRDFLKEEEESTKAKAM-SMKKAIRPRVESTSSLDD-- 98

Query: 67  WPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCG 126
                   A      S + D+     T  TI   + +    +CE+C KKVG+I F+CRCG
Sbjct: 99  -------VAISMVQLSLSFDN-----TKKTINGNSSTKKSEQCEMCKKKVGIIGFKCRCG 146

Query: 127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
            ++CG HR P++H C FD+K   RE+L+K NP ++ +KL  R 
Sbjct: 147 SMFCGKHRLPEKHECNFDYKAMGREILMKQNPPLKPEKLPVRF 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260816608|ref|XP_002603180.1| hypothetical protein BRAFLDRAFT_226485 [Branchiostoma floridae] gi|229288497|gb|EEN59191.1| hypothetical protein BRAFLDRAFT_226485 [Branchiostoma floridae]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 22/184 (11%)

Query: 5   NVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPT------NAP 58
           N T+C  GCGFYG+  N  MCSKCY D L+ +  + +S  +  A  S   +        P
Sbjct: 7   NPTLCRNGCGFYGTSANDGMCSKCYKDTLRRKQNSPNSGRISPAGNSSSTSTNTVTHEEP 66

Query: 59  NP-----SVLDKSWPPQWI-----ISAAKTTNTSNAVDSRA------SNQTTSTIESGAG 102
           +P        D S  PQ       +  A    T+NA DS        S+++ ++ +S  G
Sbjct: 67  SPVGSWDDAADSSTSPQAAEAQAEVEGAVAPTTTNAADSTTLQEEDQSDRSQNSPDSQKG 126

Query: 103 SSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRA 162
            S K RC  C KKVGL  F CRCG LYCG HRY  +H CTFD+K   +E + K+NP++  
Sbjct: 127 KSKKNRCFTCRKKVGLTGFSCRCGGLYCGLHRYSDKHDCTFDYKAAGQEQIRKNNPVVVG 186

Query: 163 DKLE 166
           +K++
Sbjct: 187 EKIQ 190

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|15235819|ref|NP_194013.1| zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Arabidopsis thaliana] gi|42572995|ref|NP_974594.1| zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Arabidopsis thaliana] gi|75318397|sp|O49663.1|SAP9_ARATH RecName: Full=Zinc finger A20 and AN1 domain-containing stress-associated protein 9; Short=AtSAP9 gi|2827559|emb|CAA16567.1| predicted protein [Arabidopsis thaliana] gi|3292808|emb|CAA19798.1| putative protein [Arabidopsis thaliana] gi|7269129|emb|CAB79237.1| predicted protein [Arabidopsis thaliana] gi|25082838|gb|AAN72006.1| predicted protein [Arabidopsis thaliana] gi|30102906|gb|AAP21371.1| At4g22820 [Arabidopsis thaliana] gi|332659261|gb|AEE84661.1| zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Arabidopsis thaliana] gi|332659262|gb|AEE84662.1| zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Arabidopsis thaliana]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 8   MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKSW 67
           +C+KGCGF+GS  N ++CSKCY      E  A+++    A +KS  P+    P  L  + 
Sbjct: 21  LCVKGCGFFGSPSNMDLCSKCYRGICAEE--AQTAVAKAAVEKSFKPSP---PRSLFIAE 75

Query: 68  PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
           PP  ++           V +  S+         +  +   RC  CNKKVG++ F+C+CG 
Sbjct: 76  PPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGS 135

Query: 128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
            +CG HRYP+ H C+FDFK+  R  + K NP+++ADK++
Sbjct: 136 TFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512275|ref|XP_003626426.1| Zinc finger A20 and AN1 domain-containing stress-associated protein [Medicago truncatula] gi|355501441|gb|AES82644.1| Zinc finger A20 and AN1 domain-containing stress-associated protein [Medicago truncatula]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 89/163 (54%), Gaps = 32/163 (19%)

Query: 7   TMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPTNAPNPSVLDKS 66
           ++C  GCG+YG   NKN+CSKCY+ YLK  ++ +SS        S  P+   NPS+ D  
Sbjct: 4   SLCANGCGYYGLPSNKNLCSKCYNVYLKENIVLESS--------SSCPSK--NPSIND-- 51

Query: 67  WPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCG 126
                              D+ A+    S I+S      K RC+ CNKKVGL  F+CRCG
Sbjct: 52  -----------------ICDAVAA---ISLIDSDNMKEKKTRCKSCNKKVGLTGFKCRCG 91

Query: 127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169
            ++CG HRYP+EH C  D KK  R++L K NPL   DKL+ RI
Sbjct: 92  DVFCGMHRYPEEHTCKVDLKKIGRQILEKQNPLCMGDKLKYRI 134

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:504955427	125	AT4G14225 [Arabidopsis thalian	0.514	0.696	0.428	1.5e-26
TAIR|locus:2034650	168	AT1G12440 [Arabidopsis thalian	0.881	0.886	0.371	1.5e-26
TAIR|locus:2138053	130	SAP10 "stress-associated prote	0.360	0.469	0.606	1.9e-26
ZFIN|ZDB-GENE-040426-1979	214	zfand5a "zinc finger, AN1-type	0.360	0.285	0.491	4.4e-25
TAIR|locus:2132649	176	AT4G22820 [Arabidopsis thalian	0.911	0.875	0.333	7.6e-25
ZFIN|ZDB-GENE-030131-8405	232	zfand6 "zinc finger, AN1-type	0.497	0.362	0.453	3.9e-24
TAIR|locus:2042011	163	AT2G27580 [Arabidopsis thalian	0.881	0.914	0.325	6.8e-24
TAIR|locus:2118036	175	SAP7 "stress-associated protei	0.911	0.88	0.341	8.7e-24
MGI|MGI:1278334	213	Zfand5 "zinc finger, AN1-type	0.603	0.478	0.368	2.1e-23
RGD|1310776	213	Zfand5 "zinc finger, AN1-type	0.603	0.478	0.368	2.1e-23

TAIR|locus:504955427 AT4G14225 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query:    75 AAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHR 134
             +A+   T N V+++A+ + T+   +  GS  K  C  C KKVGL+ F CRCGHL+  +HR
Sbjct:    36 SARYLATFN-VNTKAAEEVTAQEATVLGS--KGGCA-CKKKVGLLGFHCRCGHLFFASHR 91

Query:   135 YPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
             YP+EH+C  D+K    ++L K NP+++ DKL
Sbjct:    92 YPEEHSCPSDYKSAAIDVLAKQNPVVKGDKL 122

GO:0003677 "DNA binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2034650 AT1G12440 [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 59/159 (37%), Positives = 82/159 (51%)

Query:     8 MCMKGCGFYGSKENKNMCSKCYDDYLKAEXXXXXXXXXXXXXXXXGPTNAPNPSVLDKSW 67
             +C+KGCGF+GS  N N+CSKCY D    E                 P N P         
Sbjct:    18 LCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSL--NP-NKPKTQPQQSQE 74

Query:    68 PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
               Q ++ +  +++++   DS A+             S   RC  CNKKVG+  F+CRCG 
Sbjct:    75 ITQGVLGSGSSSSSTRGGDSAAAPLDPP-------KSTATRCLSCNKKVGVTGFKCRCGS 127

Query:   128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
              +CGTHRYP+ H C FDFK   RE + K NP+++ADK++
Sbjct:   128 TFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2138053 SAP10 "stress-associated protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 37/61 (60%), Positives = 49/61 (80%)

Query:   106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
             KRRC IC +KVG++ F+CRCGH++CG+HRYP+EH+C FD+K+  R  L    PLIRADKL
Sbjct:    68 KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKL 127

Query:   166 E 166
             +
Sbjct:   128 Q 128

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010038 "response to metal ion" evidence=IEP

GO:0010042 "response to manganese ion" evidence=IMP

GO:0010043 "response to zinc ion" evidence=IMP

GO:0010045 "response to nickel cation" evidence=IMP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0070417 "cellular response to cold" evidence=IEP

GO:0071472 "cellular response to salt stress" evidence=IEP

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

ZFIN|ZDB-GENE-040426-1979 zfand5a "zinc finger, AN1-type domain 5a" [Danio rerio (taxid:7955)]

 Score = 183 (69.5 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query:   106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKL 165
             K RC  C K+VGL  F CRCG+L+CG HRY  +H CT+D+K      + K+NP++ ADK+
Sbjct:   152 KNRCFTCRKRVGLTGFDCRCGNLFCGIHRYSDKHNCTYDYKAEAAAKIRKENPVVVADKI 211

Query:   166 E 166
             +
Sbjct:   212 Q 212

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2132649 AT4G22820 [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 53/159 (33%), Positives = 79/159 (49%)

Query:     8 MCMKGCGFYGSKENKNMCSKCYDDYLKAEXXXXXXXXXXXXXXXXGPTNAPNPSVLDKSW 67
             +C+KGCGF+GS  N ++CSKCY      E                 P     P  L  + 
Sbjct:    21 LCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSP-----PRSLFIAE 75

Query:    68 PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGH 127
             PP  ++           V +  S+         +  +   RC  CNKKVG++ F+C+CG 
Sbjct:    76 PPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGS 135

Query:   128 LYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
              +CG HRYP+ H C+FDFK+  R  + K NP+++ADK++
Sbjct:   136 TFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=RCA

ZFIN|ZDB-GENE-030131-8405 zfand6 "zinc finger, AN1-type domain 6" [Danio rerio (taxid:7955)]

 Score = 194 (73.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 39/86 (45%), Positives = 50/86 (58%)

Query:    81 TSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHA 140
             T +A  S  S QT+   E       K RC  C KKVGL  F CRCG L+CG HRY   H+
Sbjct:   147 TVSASASSVSEQTSDEPEQSKPK--KNRCFTCRKKVGLTGFDCRCGQLFCGIHRYSDVHS 204

Query:   141 CTFDFKKFDREMLVKDNPLIRADKLE 166
             C+FD+K    E + K+NPLI  +K++
Sbjct:   205 CSFDYKADAAEKIRKENPLIVGEKIK 230

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2042011 AT2G27580 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 52/160 (32%), Positives = 84/160 (52%)

Query:     8 MCMKGCGFYGSKENKNMCSKCYDDYLKAEXXXXXXXXXXXXXXXXGPTNAPNPSVLDKSW 67
             +C   CGF+GS   +N+CSKC+ D L+ +                    A + SV     
Sbjct:    12 LCANNCGFFGSTATQNLCSKCFRD-LQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPPP 70

Query:    68 PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVK-RRCEICNKKVGLIEFRCRCG 126
             PP          ++   V++++  +  +  E   G     +RC  C ++VG+  FRCRCG
Sbjct:    71 PP---------ADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCG 121

Query:   127 HLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
              ++CGTHRY ++H C+FDFK+  ++ + K NP+++ADKLE
Sbjct:   122 FVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLE 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2118036 SAP7 "stress-associated protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 55/161 (34%), Positives = 82/161 (50%)

Query:     8 MCMKGCGFYGSKENKNMCSKCYDDYLKAEXXXXXXXXXXXXXXXXGPTNAPNPSVLDKSW 67
             +C  GCGF+GS  N N+CSKCY   L+AE                     P+ S++    
Sbjct:    18 LCDNGCGFFGSPSNMNLCSKCYRS-LRAEEDQTAVAKAAVKNSL----KLPSCSIIAPGQ 72

Query:    68 PPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVK--RRCEICNKKVGLIEFRCRC 125
                  I  A         +  +        E+     V+   RC  CNKKVG++ F+C+C
Sbjct:    73 KHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKC 132

Query:   126 GHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
             G  +CG+HRYP++H C+FDFK+  R+ + K NPL++ADK++
Sbjct:   133 GSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

MGI|MGI:1278334 Zfand5 "zinc finger, AN1-type domain 5" [Mus musculus (taxid:10090)]

 Score = 192 (72.6 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
 Identities = 38/103 (36%), Positives = 57/103 (55%)

Query:    64 DKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRC 123
             DK   P+  +S    T  S +V   +S+Q+            K RC +C KKVGL  F C
Sbjct:   110 DKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPE-LPKPKKNRCFMCRKKVGLTGFDC 168

Query:   124 RCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
             RCG+L+CG HRY  +H C +D+K      + K+NP++ A+K++
Sbjct:   169 RCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001944 "vasculature development" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IMP

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0048745 "smooth muscle tissue development" evidence=IMP

GO:0060324 "face development" evidence=IMP

RGD|1310776 Zfand5 "zinc finger, AN1-type domain 5" [Rattus norvegicus (taxid:10116)]

 Score = 192 (72.6 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
 Identities = 38/103 (36%), Positives = 57/103 (55%)

Query:    64 DKSWPPQWIISAAKTTNTSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRC 123
             DK   P+  +S    T  S +V   +S+Q+            K RC +C KKVGL  F C
Sbjct:   110 DKITSPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPE-LPKPKKNRCFMCRKKVGLTGFDC 168

Query:   124 RCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLE 166
             RCG+L+CG HRY  +H C +D+K      + K+NP++ A+K++
Sbjct:   169 RCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001944 "vasculature development" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA;ISO

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA;ISO

GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO

GO:0048745 "smooth muscle tissue development" evidence=IEA;ISO

GO:0060324 "face development" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49663	SAP9_ARATH	No assigned EC number	0.3584	0.9112	0.875	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	169
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	4e-11
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	3e-08
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	7e-06

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 54.7 bits (132), Expect = 4e-11
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 109 CEICNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFK 146
           C  C KKVGL  F+CR CG+L+CG HR P++H C  D+K
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 47.1 bits (112), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 112 CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFKK 147
           C KK  L  F+CR CG  +C  HR P++H C   +K 
Sbjct: 6   CKKKDFLP-FKCRFCGGTFCLKHRLPEDHNCPGLYKS 41

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 8  MCMKGCGFYGSKENKNMCSKCY 29
           C  GCGFYGS   + +CSKCY
Sbjct: 3  KCTPGCGFYGSPATEGLCSKCY 24

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.54
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.53
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.47
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.08
COG3582	162	Predicted nucleic acid binding protein containing	96.8
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.09
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	92.85
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	92.51
KOG3183	250	consensus Predicted Zn-finger protein [General fun	91.64
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	91.57
KOG1818	634	consensus Membrane trafficking and cell signaling	87.9
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.6
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	85.2

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=5.1e-45  Score=294.48  Aligned_cols=149  Identities=40%  Similarity=0.827  Sum_probs=99.3

Q ss_pred             ccccccCCCCCCcccCCCchhhhhhHHHHHHHHhh-hhhhhhhhhccCCCCCCCCCCccCCCCCch-hhhhcccccCCcc
Q 042575            6 VTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIAK-SSKLLDAAKKSIGPTNAPNPSVLDKSWPPQ-WIISAAKTTNTSN   83 (169)
Q Consensus         6 p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   83 (169)
                      ++||.|||||||+|+|+||||+||++++.++++.. ..+..  +...+. ++.    .+....++. ....     .+..
T Consensus        15 ~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~--~~~~~~-~~~----s~~~~~~~~~~~~~-----~~~~   82 (167)
T KOG3173|consen   15 DLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPP--VESSLS-SPR----SVPSRDPPAVSLES-----TTES   82 (167)
T ss_pred             ccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCc--cccccc-Ccc----ccCccccccccccc-----cccc
Confidence            58999999999999999999999999998887652 21111  101100 000    000000000 0000     0000


Q ss_pred             ccCCcccCCCccc--cccCCCCCcccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHHHHhCCccc
Q 042575           84 AVDSRASNQTTST--IESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIR  161 (169)
Q Consensus        84 ~~~~~~~~~~~~~--~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~  161 (169)
                        +.......+++  .........++||+.|+|||||+||.||||++||+.|||||.|+|+||||.+||+.|+++||+|+
T Consensus        83 --~~~~~~~~~s~~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~i~k~nP~v~  160 (167)
T KOG3173|consen   83 --ELKLVSDTPSTEEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREKIAKANPVVK  160 (167)
T ss_pred             --cccccccCCcccccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHHHHHhCCeee
Confidence              00000000000  01111122278999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCC
Q 042575          162 ADKLEGRI  169 (169)
Q Consensus       162 ~~Kl~~KI  169 (169)
                      ++||+ ||
T Consensus       161 a~k~~-ki  167 (167)
T KOG3173|consen  161 ADKLQ-KI  167 (167)
T ss_pred             ccccc-cC
Confidence            99999 98

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.54  E-value=2.4e-15  Score=87.59  Aligned_cols=25  Identities=52%  Similarity=1.360  Sum_probs=21.0

Q ss_pred             ccccccCCCCCCcccCCCchhhhhh
Q 042575            6 VTMCMKGCGFYGSKENKNMCSKCYD   30 (169)
Q Consensus         6 p~lC~n~CGFfGs~at~n~CSkCyr   30 (169)
                      |+||++|||||||++|+||||+|||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            6799999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.53  E-value=3.1e-15  Score=95.04  Aligned_cols=38  Identities=58%  Similarity=1.430  Sum_probs=36.9

Q ss_pred             cccccccccccceeee-cCcccccCCCCCCCCCCcccch
Q 042575          109 CEICNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFK  146 (169)
Q Consensus       109 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  146 (169)
                      |+.|+++++|++|+|+ |+++||..|||||+|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.47  E-value=1.1e-14  Score=85.59  Aligned_cols=25  Identities=40%  Similarity=1.172  Sum_probs=23.6

Q ss_pred             ccccc-cCCCCCCcccCCCchhhhhh
Q 042575            6 VTMCM-KGCGFYGSKENKNMCSKCYD   30 (169)
Q Consensus         6 p~lC~-n~CGFfGs~at~n~CSkCyr   30 (169)
                      |++|. +|||||||++|+||||||||
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            46899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.08  E-value=3.3e-11  Score=77.43  Aligned_cols=38  Identities=42%  Similarity=1.015  Sum_probs=28.1

Q ss_pred             ccc--ccccccccceeee-cCcccccCCCCCCCCCCcccchh
Q 042575          109 CEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFKK  147 (169)
Q Consensus       109 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  147 (169)
                      |..  |++++. ++|.|+ |+..||..|||||.|+|+++++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            455  899888 699999 99999999999999999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.80  E-value=0.0006  Score=55.58  Aligned_cols=37  Identities=27%  Similarity=0.546  Sum_probs=29.9

Q ss_pred             cccccccccccceeee-cCcccccCCCCCCCCCCcccch
Q 042575          109 CEICNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFK  146 (169)
Q Consensus       109 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  146 (169)
                      |..|++..+| .++|- |++.||+.||+++.|+|.+...
T Consensus       100 ~~~~g~~s~l-~~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582         100 PQCTGKGSTL-AGKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             ceeccCCccc-cccccCCCCcceeceecccccccccHHH
Confidence            3444454444 78999 9999999999999999998875

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.09  E-value=0.0021  Score=55.52  Aligned_cols=41  Identities=24%  Similarity=0.835  Sum_probs=35.8

Q ss_pred             ccccc--cccccccccceeee-cCcccccCCCCCCCCCCcccchh
Q 042575          106 KRRCE--ICNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFKK  147 (169)
Q Consensus       106 ~~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  147 (169)
                      ...|.  .|+. +.++.|+|- |+.+||..||.-+.|.|.+-+..
T Consensus         8 GkHCs~~~Ckq-lDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    8 GKHCSVPYCKQ-LDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             ccccCcchhhh-ccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            45677  7765 688999999 99999999999999999998863

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.85  E-value=0.054  Score=36.83  Aligned_cols=29  Identities=38%  Similarity=0.981  Sum_probs=17.4

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      ...|..|+++.+|+  -..|| ||.+||+.+-
T Consensus         9 ~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~Cs   40 (69)
T PF01363_consen    9 ASNCMICGKKFSLFRRRHHCRNCGRVVCSSCS   40 (69)
T ss_dssp             -SB-TTT--B-BSSS-EEE-TTT--EEECCCS
T ss_pred             CCcCcCcCCcCCCceeeEccCCCCCEECCchh
Confidence            57999999999995  47999 9999997653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=92.51  E-value=0.051  Score=35.44  Aligned_cols=29  Identities=31%  Similarity=0.865  Sum_probs=24.3

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      ...|..|+++.++.  ...|| ||.+||..+-
T Consensus         2 ~~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C~   33 (57)
T cd00065           2 ASSCMGCGKPFTLTRRRHHCRNCGRIFCSKCS   33 (57)
T ss_pred             cCcCcccCccccCCccccccCcCcCCcChHHc
Confidence            35799999999994  68999 9999998543

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=91.64  E-value=0.037  Score=47.94  Aligned_cols=38  Identities=34%  Similarity=0.920  Sum_probs=32.3

Q ss_pred             ccccc--ccccccccc-ceeee-cCcccccCCCCCCCCCCcc
Q 042575          106 KRRCE--ICNKKVGLI-EFRCR-CGHLYCGTHRYPKEHACTF  143 (169)
Q Consensus       106 ~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~f  143 (169)
                      .++|.  .|+|++-+. .+.|+ ||..||-+||++-.|.|.-
T Consensus        98 t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~~  139 (250)
T KOG3183|consen   98 TNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCNK  139 (250)
T ss_pred             cccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhhh
Confidence            56676  688887773 69999 9999999999999999983

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=91.57  E-value=0.081  Score=35.84  Aligned_cols=29  Identities=31%  Similarity=0.894  Sum_probs=24.3

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      ...|..|+++.++.  ...|| ||.+||..+-
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C~   41 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKCS   41 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHHc
Confidence            45899999999984  67899 9999997654

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.90  E-value=0.19  Score=48.65  Aligned_cols=43  Identities=28%  Similarity=0.756  Sum_probs=34.4

Q ss_pred             ccccccccccccccc--eeee-cCcccccCCC-----------CCCCCCCcccchhh
Q 042575          106 KRRCEICNKKVGLIE--FRCR-CGHLYCGTHR-----------YPKEHACTFDFKKF  148 (169)
Q Consensus       106 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk~~  148 (169)
                      ...|..|+.+.|+++  ..|| ||.+||+.|-           |-+.--|..||...
T Consensus       165 ~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l  221 (634)
T KOG1818|consen  165 SEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELL  221 (634)
T ss_pred             ccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHh
Confidence            579999999999975  6899 9999999874           34556677777533

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.60  E-value=0.28  Score=28.57  Aligned_cols=22  Identities=27%  Similarity=0.593  Sum_probs=20.2

Q ss_pred             ccccccccccccceeee-cCccc
Q 042575          108 RCEICNKKVGLIEFRCR-CGHLY  129 (169)
Q Consensus       108 rC~~C~kkvgl~gf~Cr-Cg~~F  129 (169)
                      +|-.|++.|.+..-.|- ||+.|
T Consensus         2 ~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    2 TCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             cCCCCcCCchhhcCcCCCCCCCC
Confidence            68999999999999999 99887

Several members are annotated as putative helicases.

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=85.20  E-value=0.48  Score=30.46  Aligned_cols=23  Identities=35%  Similarity=1.021  Sum_probs=18.5

Q ss_pred             ccccccccccc---cccceeee-cCcc
Q 042575          106 KRRCEICNKKV---GLIEFRCR-CGHL  128 (169)
Q Consensus       106 ~~rC~~C~kkv---gl~gf~Cr-Cg~~  128 (169)
                      +..|..|++.|   ++.|++|+ |+.+
T Consensus        11 ~~~C~~C~~~i~g~~~~g~~C~~C~~~   37 (53)
T PF00130_consen   11 PTYCDVCGKFIWGLGKQGYRCSWCGLV   37 (53)
T ss_dssp             TEB-TTSSSBECSSSSCEEEETTTT-E
T ss_pred             CCCCcccCcccCCCCCCeEEECCCCCh
Confidence            78999999999   66899999 8765

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	169
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		1e-11
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		6e-11
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		9e-11
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		4e-09
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		6e-09
1x4w_A	67	Solution Structure Of The Zf-An1 Domain From Human		3e-05

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 31/43 (72%)
Query: 104 SVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFK 146
           S   RC  CNKKVG+  F+CRCG  +CGTHRYP+ H C FDFK
Sbjct: 23  STATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 108 RCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFK 146
           RC +C K+VGL  F CRCG  +CG+HRYP+ H CTFDFK
Sbjct: 17  RCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFK 55

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 34/40 (85%)
Query: 108 RCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKK 147
           RC  CNKKVG++ F+C+CG  +CG+HRYP++H C+FDFK+
Sbjct: 17  RCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKE 56

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFK 146
           K RC +C KKVGL  F CRCG+L+CG HRY  +H C +D+K
Sbjct: 25  KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYK 65

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 105 VKRRCEICNKKVGL-IEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPL 159
           + + C +C KK GL   F CRCG+ +C +HRY + H C +D+K   R  L + NP+
Sbjct: 24  IMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

>pdb|1X4W|A Chain A, Solution Structure Of The Zf-An1 Domain From Human Hypothetical Protein Flj13222 Length = 67

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 106 KRRCEICNKKVGLIEFR---CRCGHLYCGTHRYPKEHACTFD 144
           +RRC  C  K+ L++     CRCG+++C  HR P++H CTFD
Sbjct: 15  RRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFD 56

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	7e-23
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	1e-20
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	5e-20
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	7e-20
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	4e-19
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	4e-18
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	6e-09
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	9e-07

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score = 85.8 bits (212), Expect = 7e-23
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 106 KRRCEICNKKVGLIE-FRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRA 162
            + C +C KK GL   F CRCG+ +C +HRY + H C +D+K   R  L + NP+   
Sbjct: 25  MKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGP 82

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 79.6 bits (196), Expect = 1e-20
 Identities = 28/69 (40%), Positives = 36/69 (52%)

Query: 83  NAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACT 142
           ++  S      ++        S   RC  CNKKVG+  F+CRCG  +CGTHRYP+ H C 
Sbjct: 2   SSGSSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQ 61

Query: 143 FDFKKFDRE 151
           FDFK     
Sbjct: 62  FDFKGVASG 70

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 77.9 bits (192), Expect = 5e-20
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 93  TTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDRE 151
           ++ +           RC  CNKKVG++ F+C+CG  +CG+HRYP++H C+FDFK+    
Sbjct: 2   SSGSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSG 60

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 77.6 bits (191), Expect = 7e-20
 Identities = 25/48 (52%), Positives = 30/48 (62%)

Query: 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML 153
             RC +C K+VGL  F CRCG  +CG+HRYP+ H CTFDFK       
Sbjct: 15  PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS 62

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 75.7 bits (186), Expect = 4e-19
 Identities = 24/45 (53%), Positives = 30/45 (66%)

Query: 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDR 150
           K RC +C KKVGL  F CRCG+L+CG HRY  +H C +D+K    
Sbjct: 25  KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS 69

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 73.1 bits (179), Expect = 4e-18
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 93  TTSTIESGAGSSVKRRCEICNKKVGLIEFR---CRCGHLYCGTHRYPKEHACTFDFKKFD 149
           ++ +  S +    +RRC  C  K+ L++     CRCG+++C  HR P++H CTFD     
Sbjct: 2   SSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRG 61

Query: 150 REML 153
               
Sbjct: 62  SGPS 65

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 48.9 bits (116), Expect = 6e-09
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 8  MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKSIGPT 55
          +C  GCGFYG+     MCS CY ++L+ +  +     +  A  S  PT
Sbjct: 15 LCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 62

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 43.7 bits (102), Expect = 9e-07
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 8  MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAKSSKLLDAAKKS 51
          +C KGCG+YG+   +  CSKC+ +        +  +  + A++ 
Sbjct: 18 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERL 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.95
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.92
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.91
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.9
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.89
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.89
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.67
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.64
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.58
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.27
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.23
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.23
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.89
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	93.2
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	92.97
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	91.97
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	91.65
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	91.16
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	90.67
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	90.58
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	89.83
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	89.27
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	88.12
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	85.56
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	83.92
3c5k_A	109	HD6, histone deacetylase 6; HDAC6, zinc finger, ac	80.1

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.95  E-value=1.2e-29  Score=184.64  Aligned_cols=58  Identities=40%  Similarity=0.992  Sum_probs=56.6

Q ss_pred             cccccccccccccc-ceeeecCcccccCCCCCCCCCCcccchhhhHHHHHHhCCccccc
Q 042575          106 KRRCEICNKKVGLI-EFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRAD  163 (169)
Q Consensus       106 ~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~~~  163 (169)
                      ++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        25 ~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           25 MKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            79999999999995 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=1.3e-26  Score=160.74  Aligned_cols=49  Identities=51%  Similarity=1.162  Sum_probs=47.7

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHHH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLV  154 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~  154 (169)
                      ++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           15 PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            7999999999999999999999999999999999999999999999885

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=4e-26  Score=158.29  Aligned_cols=48  Identities=50%  Similarity=1.229  Sum_probs=47.0

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML  153 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  153 (169)
                      ++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           15 NNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             SCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            799999999999999999999999999999999999999999999887

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.90  E-value=6.6e-25  Score=155.92  Aligned_cols=47  Identities=51%  Similarity=1.170  Sum_probs=45.6

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREM  152 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~  152 (169)
                      ++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus        25 ~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           25 KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             TTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             CCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            79999999999999999999999999999999999999999999874

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.89  E-value=6.6e-25  Score=155.94  Aligned_cols=48  Identities=54%  Similarity=1.189  Sum_probs=46.8

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML  153 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  153 (169)
                      ++||+.|+|||+|++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        25 ~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           25 ATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             CCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             CccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.89  E-value=4.4e-25  Score=154.31  Aligned_cols=48  Identities=40%  Similarity=0.866  Sum_probs=45.9

Q ss_pred             ccccccccccccccc---eeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575          106 KRRCEICNKKVGLIE---FRCRCGHLYCGTHRYPKEHACTFDFKKFDREML  153 (169)
Q Consensus       106 ~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  153 (169)
                      ++||+.|+|||||++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus        15 ~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A           15 RRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             TTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             CCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            899999999999984   999999999999999999999999999999865

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.67  E-value=2.1e-17  Score=113.77  Aligned_cols=36  Identities=36%  Similarity=0.911  Sum_probs=32.0

Q ss_pred             CcccccccCCCCCCcccCCCchhhhhhHHHHHHHHh
Q 042575            4 NNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIA   39 (169)
Q Consensus         4 ~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~   39 (169)
                      ++|+||+|||||||||+|+||||||||++++++++.
T Consensus        11 ~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~   46 (62)
T 2kzy_A           11 PGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS   46 (62)
T ss_dssp             SCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred             CcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence            478899999999999999999999999998765543

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.64  E-value=6.9e-17  Score=114.37  Aligned_cols=35  Identities=31%  Similarity=0.836  Sum_probs=27.3

Q ss_pred             CCcccccccCCCCCCcccCCCchhhhhhHHHHHHH
Q 042575            3 RNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAEL   37 (169)
Q Consensus         3 ~~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~   37 (169)
                      +++|+||+|||||||||+|+||||||||+...+..
T Consensus        13 pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~~   47 (74)
T 2c7n_A           13 DQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKAR   47 (74)
T ss_dssp             -----CCTTCSSSCCCGGGTTCCHHHHHHHHHHHH
T ss_pred             CCcchhHHhCCCCCCChhhcCccHHHHHHHHHHHH
Confidence            35788999999999999999999999999865443

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.58  E-value=5e-16  Score=102.01  Aligned_cols=30  Identities=33%  Similarity=0.979  Sum_probs=27.5

Q ss_pred             cccccc-cCCCCCCcccCCCchhhhhhHHHH
Q 042575            5 NVTMCM-KGCGFYGSKENKNMCSKCYDDYLK   34 (169)
Q Consensus         5 ~p~lC~-n~CGFfGs~at~n~CSkCyr~~~~   34 (169)
                      +..||+ |||||||||+|+|||||||||++.
T Consensus        17 gq~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           17 GTSKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CCCBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             CccccccCCCCCccCcccCCcchHHHHHHHH
Confidence            347999 999999999999999999999875

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.27  E-value=1.1e-12  Score=95.29  Aligned_cols=55  Identities=20%  Similarity=0.433  Sum_probs=46.4

Q ss_pred             cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcccchhhhHHHHHHhCCcccccccccCC
Q 042575          106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI  169 (169)
Q Consensus       106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~~~Kl~~KI  169 (169)
                      ++||..  |+++ +|++|.|+ |+.+||..|||+++|+|+..       .+.+.++...+.++. +|
T Consensus        25 ~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~-~~   82 (86)
T 1wfe_A           25 SYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVR-SG   82 (86)
T ss_dssp             CEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSS-CS
T ss_pred             CCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHH-HH
Confidence            789999  9998 78999999 99999999999999999975       335667777666665 44

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.23  E-value=2.6e-12  Score=91.28  Aligned_cols=40  Identities=25%  Similarity=0.801  Sum_probs=38.3

Q ss_pred             cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcccch
Q 042575          106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFK  146 (169)
Q Consensus       106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  146 (169)
                      .+||..  |+++ ++++|+|+ |+.+||..|||++.|+|+++++
T Consensus        14 g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~   56 (75)
T 1wys_A           14 GQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV   56 (75)
T ss_dssp             CCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred             CCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence            689998  9998 89999999 9999999999999999999986

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=2.6e-12  Score=88.61  Aligned_cols=37  Identities=30%  Similarity=0.928  Sum_probs=35.2

Q ss_pred             cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcc
Q 042575          106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTF  143 (169)
Q Consensus       106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  143 (169)
                      .+||..  |+++ +|++|.|+ |+.+||..|||+|+|+|.-
T Consensus        12 ~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A           12 TNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             CCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            789999  9998 89999999 9999999999999999973

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.89  E-value=7.3e-06  Score=53.19  Aligned_cols=30  Identities=33%  Similarity=0.973  Sum_probs=26.8

Q ss_pred             Ccccccc-cCCCCCCcccCCCchhhhhhHHH
Q 042575            4 NNVTMCM-KGCGFYGSKENKNMCSKCYDDYL   33 (169)
Q Consensus         4 ~~p~lC~-n~CGFfGs~at~n~CSkCyr~~~   33 (169)
                      .+...|. .||-|||+|.+.++|..||-++.
T Consensus        13 ~gt~kCRk~GC~fFGTpen~GFCTlCf~eyr   43 (48)
T 2eqe_A           13 TGTSKCRKAGCVYFGTPENKGFCTLCFIEYS   43 (48)
T ss_dssp             CCSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred             cccchhhhcCCCcccCcccCceeeeehhhhh
Confidence            4556897 89999999999999999999985

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=93.20  E-value=0.055  Score=38.43  Aligned_cols=28  Identities=32%  Similarity=0.931  Sum_probs=24.5

Q ss_pred             ccccccccccccccc--eeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLIE--FRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++.  -.|| ||.+||+.+
T Consensus         9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            568999999999864  7999 999999875

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=92.97  E-value=0.04  Score=37.59  Aligned_cols=29  Identities=41%  Similarity=1.108  Sum_probs=24.6

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      ...|..|+++.+++  --.|| ||.+||+.+-
T Consensus        11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs   42 (73)
T 1vfy_A           11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHS   42 (73)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred             CCcccCCCCccCCccccccCCCCCEEEccccc
Confidence            35899999999985  47999 9999999763

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=91.97  E-value=0.063  Score=37.34  Aligned_cols=28  Identities=36%  Similarity=1.086  Sum_probs=24.1

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            46899999999985  47999 999999864

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=91.65  E-value=0.067  Score=40.16  Aligned_cols=28  Identities=29%  Similarity=0.945  Sum_probs=24.0

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            46899999999885  47999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.16  E-value=0.097  Score=36.46  Aligned_cols=28  Identities=21%  Similarity=0.737  Sum_probs=24.2

Q ss_pred             ccccccccccccccc--eeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLIE--FRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  133 (169)
                      ...|..|.++.+++.  -.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            468999999998853  7999 999999875

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=90.67  E-value=0.1  Score=36.43  Aligned_cols=28  Identities=29%  Similarity=0.739  Sum_probs=24.2

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            56899999999985  47999 999999864

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=90.58  E-value=0.1  Score=41.90  Aligned_cols=28  Identities=32%  Similarity=0.995  Sum_probs=24.3

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            46999999999985  47999 999999964

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=89.83  E-value=0.13  Score=36.44  Aligned_cols=28  Identities=32%  Similarity=0.943  Sum_probs=24.1

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46899999999985  58999 999999864

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=89.27  E-value=0.15  Score=41.42  Aligned_cols=28  Identities=32%  Similarity=1.124  Sum_probs=24.4

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            56899999999985  58999 999999864

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=88.12  E-value=0.19  Score=37.86  Aligned_cols=41  Identities=17%  Similarity=0.408  Sum_probs=28.2

Q ss_pred             cccccccccccccc--ceeee-cCcccccCC---CCCCCCCCcccch
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH---RYPKEHACTFDFK  146 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H---Ry~e~H~C~fDyk  146 (169)
                      ...|..|+++.+++  --.|| ||.+||+..   +.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            46899999998885  47999 999998754   5555555665554

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=85.56  E-value=0.26  Score=32.75  Aligned_cols=23  Identities=26%  Similarity=0.907  Sum_probs=19.5

Q ss_pred             ccccccccccccc--cceeee-cCcc
Q 042575          106 KRRCEICNKKVGL--IEFRCR-CGHL  128 (169)
Q Consensus       106 ~~rC~~C~kkvgl--~gf~Cr-Cg~~  128 (169)
                      +..|..|++++++  ++++|| |+.+
T Consensus        19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~   44 (61)
T 4b6d_A           19 PESCVPCGKRIKFGKLSLKCRDCRVV   44 (61)
T ss_dssp             CEECTTTCCEECTTCEEEEESSSSCE
T ss_pred             CcccccccCEEEEeeEeeECCCCCCe
Confidence            6799999999977  799999 8643

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=83.92  E-value=0.41  Score=40.90  Aligned_cols=40  Identities=18%  Similarity=0.339  Sum_probs=27.1

Q ss_pred             ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCcccch
Q 042575          106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFDFK  146 (169)
Q Consensus       106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  146 (169)
                      +..|..|++.+ |+  .|++|| ||.++|..-.-.=. .|.-+..
T Consensus       357 ~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          357 TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            78999999988 66  799999 99999976432112 3876654

>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A

Probab=80.10  E-value=0.68  Score=34.07  Aligned_cols=30  Identities=33%  Similarity=0.837  Sum_probs=23.7

Q ss_pred             ccccccccccccccceeee-cCcccccCCCCCCCC
Q 042575          106 KRRCEICNKKVGLIEFRCR-CGHLYCGTHRYPKEH  139 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H  139 (169)
                      ..+|..|....++  +-|- ||+++|+  ||+..|
T Consensus        24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~H   54 (109)
T 3c5k_A           24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGH   54 (109)
T ss_dssp             TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCH
T ss_pred             CCcCccccCCCCe--eeeeecCccccC--CCcChH
Confidence            5689999988665  6688 9999998  555555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	1e-22
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	5e-19
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	9e-19
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-17
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	1e-08

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.1 bits (208), Expect = 1e-22
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 103 SSVKRRCEICNKKVGLIE-FRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIR 161
             + + C +C KK GL   F CRCG+ +C +HRY + H C +D+K   R  L + NP+  
Sbjct: 22  KKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSG 81

Query: 162 A 162
            
Sbjct: 82  P 82

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 74.1 bits (182), Expect = 5e-19
 Identities = 25/47 (53%), Positives = 30/47 (63%)

Query: 104 SVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDR 150
               RC +C K+VGL  F CRCG  +CG+HRYP+ H CTFDFK    
Sbjct: 13  QRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGS 59

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.8 bits (181), Expect = 9e-19
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 81  TSNAVDSRASNQTTSTIESGAGSSVKRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHA 140
           +S +    +S               K RC +C KKVGL  F CRCG+L+CG HRY  +H 
Sbjct: 2   SSGSSGPSSSQSEEKA--PELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHN 59

Query: 141 CTFDFKK 147
           C +D+K 
Sbjct: 60  CPYDYKA 66

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.9 bits (171), Expect = 2e-17
 Identities = 26/45 (57%), Positives = 30/45 (66%)

Query: 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDR 150
             RC  CNKKVG+  F+CRCG  +CGTHRYP+ H C FDFK    
Sbjct: 25  ATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS 69

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (111), Expect = 1e-08
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 8  MCMKGCGFYGSKENKNMCSKCYDDYLKAE 36
          +C KGCG+YG+   +  CSKC+ +     
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCWREEYHKA 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.93
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.9
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.89
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.88
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.68
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.08
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	95.52
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	93.18
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	92.67
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	91.79
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	90.08
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	90.0
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	83.26
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	82.69

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=5.4e-28  Score=174.18  Aligned_cols=58  Identities=40%  Similarity=0.993  Sum_probs=55.8

Q ss_pred             ccccccccccccc-cceeeecCcccccCCCCCCCCCCcccchhhhHHHHHHhCCccccc
Q 042575          106 KRRCEICNKKVGL-IEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRAD  163 (169)
Q Consensus       106 ~~rC~~C~kkvgl-~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~~~  163 (169)
                      ++||+.|+|||+| ++|+||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        25 ~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          25 MKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            7899999999999 589999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.4e-25  Score=153.81  Aligned_cols=48  Identities=52%  Similarity=1.193  Sum_probs=45.9

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML  153 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l  153 (169)
                      ++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..|
T Consensus        15 ~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~~   62 (64)
T d1wfha_          15 PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS   62 (64)
T ss_dssp             CCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCC
T ss_pred             CCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCCC
Confidence            899999999999999999999999999999999999999999998543

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.1e-24  Score=151.74  Aligned_cols=45  Identities=53%  Similarity=1.246  Sum_probs=43.4

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDR  150 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr  150 (169)
                      ++||..|+|||+|++|+||||++||+.|||||.|+|+||||+.|.
T Consensus        25 ~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          25 KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             TTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             CCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            799999999999999999999999999999999999999998874

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=9.7e-24  Score=148.31  Aligned_cols=45  Identities=58%  Similarity=1.307  Sum_probs=44.2

Q ss_pred             ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhH
Q 042575          106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDR  150 (169)
Q Consensus       106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr  150 (169)
                      ++||..|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        25 k~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          25 ATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             CCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            899999999999999999999999999999999999999999987

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.9e-18  Score=112.27  Aligned_cols=33  Identities=33%  Similarity=0.907  Sum_probs=30.2

Q ss_pred             ccccCCCCCCcccCCCchhhhhhHHHHHHHHhh
Q 042575            8 MCMKGCGFYGSKENKNMCSKCYDDYLKAELIAK   40 (169)
Q Consensus         8 lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~~   40 (169)
                      ||.|||||||||+|+|||||||||+..++++..
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~~   33 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ   33 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHHH
Confidence            799999999999999999999999998777643

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=6.1e-07  Score=63.25  Aligned_cols=37  Identities=30%  Similarity=0.779  Sum_probs=33.2

Q ss_pred             cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcc
Q 042575          106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTF  143 (169)
Q Consensus       106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  143 (169)
                      ..+|..  |++ +.++.|.|. |+..||..||+++.|.|.-
T Consensus        25 ~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          25 SYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             CEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             cCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            678987  985 688999997 9999999999999999974

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.0037  Score=43.05  Aligned_cols=29  Identities=34%  Similarity=0.902  Sum_probs=25.5

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      .++|..|+++.+++  -..|| ||.+||..+-
T Consensus         9 ~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs   40 (88)
T d1wfka_           9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCL   40 (88)
T ss_dssp             CSBCTTTCCBCCSSSCEEECSSSCCEEETTTS
T ss_pred             cCcCcccCchhccccccccccccChhhChHHh
Confidence            68999999999985  57999 9999998763

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.18  E-value=0.017  Score=37.46  Aligned_cols=27  Identities=44%  Similarity=1.191  Sum_probs=23.6

Q ss_pred             ccccccccccccc--ceeee-cCcccccCC
Q 042575          107 RRCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       107 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      ..|..|+++.+|+  --.|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            4699999999995  47999 999999877

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.67  E-value=0.024  Score=37.25  Aligned_cols=29  Identities=31%  Similarity=0.959  Sum_probs=25.1

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      .+.|..|+++.+++  --.|| ||.+||+.+-
T Consensus        13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CCccccCCCcccCccccccccccCCeeChhhh
Confidence            45799999999995  57999 9999998874

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.032  Score=35.71  Aligned_cols=29  Identities=28%  Similarity=0.910  Sum_probs=24.5

Q ss_pred             cccccccccccccc--ceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  134 (169)
                      ...|..|+++.+++  --.|| ||.+||+..-
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs   39 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECS   39 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGGS
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeeccccc
Confidence            45799999999995  47899 9999998753

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.054  Score=33.47  Aligned_cols=26  Identities=23%  Similarity=0.639  Sum_probs=22.5

Q ss_pred             cccccccccccc--ceeee-cCcccccCC
Q 042575          108 RCEICNKKVGLI--EFRCR-CGHLYCGTH  133 (169)
Q Consensus       108 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  133 (169)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            488999999985  47999 999999876

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.00  E-value=0.06  Score=38.29  Aligned_cols=29  Identities=24%  Similarity=0.749  Sum_probs=24.4

Q ss_pred             ccccccccccccc---cceeee-cCcccccCCC
Q 042575          106 KRRCEICNKKVGL---IEFRCR-CGHLYCGTHR  134 (169)
Q Consensus       106 ~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR  134 (169)
                      .+.|..|++.+++   .+..|| ||.+||..=+
T Consensus        48 ~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          48 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             CCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            6789999999986   356899 9999998743

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=83.26  E-value=0.5  Score=29.68  Aligned_cols=41  Identities=17%  Similarity=0.345  Sum_probs=29.3

Q ss_pred             cccccccccccc-c--cceeee-cCcccccCCCCCCCCCCcccch
Q 042575          106 KRRCEICNKKVG-L--IEFRCR-CGHLYCGTHRYPKEHACTFDFK  146 (169)
Q Consensus       106 ~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  146 (169)
                      +..|..|++.|- +  .||+|+ |+.++=....-.=...|..++.
T Consensus        19 ~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          19 PTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             CCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            678999999874 4  589999 9887755554444456766554

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.69  E-value=0.28  Score=32.62  Aligned_cols=23  Identities=35%  Similarity=1.087  Sum_probs=19.3

Q ss_pred             cccccccccccc----ccceeee-cCcc
Q 042575          106 KRRCEICNKKVG----LIEFRCR-CGHL  128 (169)
Q Consensus       106 ~~rC~~C~kkvg----l~gf~Cr-Cg~~  128 (169)
                      +.+|..|++.+.    ++||+|+ |+.+
T Consensus        38 ~~~C~~C~~~i~~~~~~qg~~C~~C~~~   65 (84)
T d1r79a_          38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM   65 (84)
T ss_dssp             TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred             CCCCcccCcccCCccccCcEecCcCCch
Confidence            679999999983    5799999 8765