Citrus Sinensis ID: 042663

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MDASAYPMMQNKDFELHDFIDDPNIDQFIDLIQGENEILEPSFGCTFVSECIVDNQIGSTGEDMFGLNGDANGGVQEEDNDGDDSSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEVLTPSSA
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEccEEEEEEEccccccHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEEECcccccccHHHHHHHHHHHHHHccccccccccc
*************FELHDFIDDPNIDQFIDLIQGENEILEPSFGCTFVSECIVDNQIGS********************************************************GKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKL*************************************CKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEVL*****
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MDASAYPMMQNKDFELHDFIDDPNIDQFIDLIQGENEILEPSFGCTFVSECIVDNQIGSTGEDMFGLNGDANGGVQEEDNDGDDSSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYxxxxxxxxxxxxxxxxxxxxxxxxxxxxDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEVLTPSSA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Transcription factor. Essential protein involved in iron uptake responses. Regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation. Confers enhanced iron mobilization responses at low iron supply.probableQ0V7X4

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1AM9, chain A
Confidence level:confident
Coverage over the Query: 101-170
View the alignment between query and template
View the model in PyMOL
Template: 3LOU, chain A
Confidence level:probable
Coverage over the Query: 210-284
View the alignment between query and template
View the model in PyMOL