Citrus Sinensis ID: 042757


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MPISRFLFFSSKHRFRQPLNLIRRFDLSKRTQSCSYTKSSRQSHRNPADYFLSPQETKASRSWSTYVIPAGGLLGLAGIATFVHYNDERRAVRKGQGENSGPNRVTGPIIGGPFTLIDTENRLVTENNFLGNWVLLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGDDYLVESSHNMYLMNPSLEVVRCFGVEYTAEELAEEISKEMKKAST
ccccHHHHHHcccccccccHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccEEEcccccccEEEEEEEccccccccHHHHHHHHHHHHHHcHcccccccEEEEEEccccccHHHHHHHHHHcccccEECcccHHHHHHHHHHccEEEEEEccccccEEEEccEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHcc
*****FLFFSSKHRFRQPLNLIRR*D************************************WSTYVIPAGGLLGLAGIATFVHYNDE****************VTGPIIGGPFTLIDTENRLVTENNFLGNWVLLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGDDYLVESSHNMYLMNPSLEVVRCFGVEYTAEELAEEISKEMKK***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPISRFLFFSSKHRFRQPLNLIRRFDLSKRTQSCSYTKSSRQSHRNPADYFLSPQETKASRSWSTYVIPAGGLLGLAGIATFVHYNDERRAVRKGQGENSGPNRVTGPIIGGPFTLIDTENRLVTENNFLGNWVLLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGDDYLVESSHNMYLMNPSLEVVRCFGVEYTAEELAEEISKEMKKAST

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein SCO1 homolog 2, mitochondrial Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX (By similarity). Participates in copper and redox homeostasis.probableQ8LAL0

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2RLI, chain A
Confidence level:very confident
Coverage over the Query: 108-270
View the alignment between query and template
View the model in PyMOL