Citrus Sinensis ID: 042775

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
Protein Sequence
PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAVADGDDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMVLAIFSL
Secondary Structure (PSIPRED)
ccccccccHHHHHHHccccHHHHHHHHHHcHHHHHHHHHccccccEEEEccccHHHHcccccccccccHHHHHHHccccEEccccccHHHHHccccccccccccccccEEEEEEEcccEEEEEEccEEEEEEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHHHccccccEEEEccccHHHHHccccccccccHHHHHHHHHHHccccEccHHHccccccccccEccccccccEEEEEEccccEEEEEccEEEEEEEEEEEccccEEEEEEccEEccHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
passgptnFTKILEKVGHFSFFIRLLKATTVRDQIERQLndtnsgvtvfaptdnafsglssgtlntlsdpQKELLIQFHVlssyipptrfqtlrnplrtnagtnsryeyplnvtssgnsvnistgitnTSVSSIVYSDGQLAVYQVDkvllpwsifgakppamapapaplkpikqnstavadgddstddddhnklNASAAVSLMGMQHVVFLFGASMVLAIFSL
Flexible Loop (DISEMBL)
passgptnfTKILEKVGHFSFFIRLLKATTVRDQIERQlndtnsgvtVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSyipptrfqtlrnplrtnagtnsryEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAVADGDDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMVLAIFSL
Low Complexity Region (SEG)
PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFsglssgtlntlsDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGakppamapapaplkpIKQNSTAVAdgddstddddHNKLNASAAVSLMGMQHVVFLFGASMVLAIFSL
Disordered region (IsUnstruct)
********FTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGL***TLNTL***QKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG******************************************AVSLMGMQHVVFLFGASMVLAIF**
Disordered Region (DISOPRED)
***SGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRF************TNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPW*************************************************LMGMQHVVFLFGASMVLAIFSL
Disordered Region (DISEMBL)
PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIK****************DHNKLNASAAVSLMGMQHVVFLFGASMVLAIFSL
Disordered Region (DISPRO)
*****PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAK**************************************SAAVSLMGMQHVVFLFGASMVLAIFSL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAVADGDDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMVLAIFSL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	224	2.2.26 [Sep-21-2011]
Q8LEJ6	246	Fasciclin-like arabinogal	yes	no	0.75	0.682	0.610	4e-52
Q8LEE9	249	Fasciclin-like arabinogal	no	no	0.669	0.602	0.613	1e-49
Q9ZWA8	247	Fasciclin-like arabinogal	no	no	0.776	0.704	0.436	1e-28
Q9FFH6	247	Fasciclin-like arabinogal	no	no	0.816	0.740	0.406	1e-28
Q9SIL7	247	Fasciclin-like arabinogal	no	no	0.919	0.834	0.361	6e-27
Q9SJ81	254	Fasciclin-like arabinogal	no	no	0.651	0.574	0.375	2e-18
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.732	0.388	0.335	1e-16
Q9SNC3	420	Fasciclin-like arabinogal	no	no	0.696	0.371	0.335	8e-14
O22126	420	Fasciclin-like arabinogal	no	no	0.651	0.347	0.317	9e-13
Q9FM65	424	Fasciclin-like arabinogal	no	no	0.651	0.344	0.291	2e-08

>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2

 Score =  204 bits (519), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 131/172 (76%), Gaps = 4/172 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNS-GVTVFAPTDNAFSGL 59
           P  SGPTN T ILEK G F+ FIRLLK+T   DQI  QLN ++S G+TVFAPTDNAF+ L
Sbjct: 29  PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL 88

Query: 60  SSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
            SGTLN+LSD QK  L+QFHVL + I   +FQT+ NPLRT AG     ++PLN+TSSGN 
Sbjct: 89  KSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQ 148

Query: 120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLK 171
           VNI+TG+ + +V++ VYSD QLAVYQVD+VLLP ++FG+   ++APAPAP K
Sbjct: 149 VNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGS---SVAPAPAPEK 197

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2

 Score =  196 bits (498), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 124/150 (82%)

Query: 7   TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNT 66
           TN TKILEK G F+ FIRLLK+T V +Q+  QLN++++G+T+FAP+D++F+GL +GTLN+
Sbjct: 38  TNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNS 97

Query: 67  LSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGI 126
           L+D Q+  LIQFHV+ SY+  + FQT+ NPLRT AG ++   +PLNVT+SGN+VNI++G+
Sbjct: 98  LTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGV 157

Query: 127 TNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
           TNT+VS  VYSDGQLAVYQVDKVLLP  +F
Sbjct: 158 TNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/181 (43%), Positives = 97/181 (53%), Gaps = 7/181 (3%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL 67
           N T ILEK G F+ FI LL  T V  Q+  Q+N ++ G+TVFAPTDNAF  L  GTLN L
Sbjct: 39  NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98

Query: 68  SDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGIT 127
           S   +  LI +HV   Y       ++ NP+RT A       Y LN T   N +N+STG  
Sbjct: 99  SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158

Query: 128 NTSVSSIVYSDGQLAVYQVDKVLLPWSIFGA-KPPAMAPAPAPLKPIKQNSTAVADGDDS 186
            T +S+ +     LAVY VD VLLP  +FG  K   +APAP      K  S  V D   S
Sbjct: 159 ETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAP------KSKSGGVTDDSGS 212

Query: 187 T 187
           T
Sbjct: 213 T 213

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 107/197 (54%), Gaps = 14/197 (7%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL 67
           N T ILEK G F   IRLL  T + +QI  Q+N ++ G+TV APTDNAF  L  GTLN L
Sbjct: 36  NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95

Query: 68  SDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNA-GTNSRYEYPLNVTSSGNSVNISTGI 126
           S   +  LI +HV   +       ++ NP+RT A G +    Y LN T  GN VN+STG+
Sbjct: 96  SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155

Query: 127 TNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPA-MAPAPAPLKPIKQNSTAVADGDD 185
             T +S+ +  +  LAVY VD VLLP  +FG +  + MAP P    P            D
Sbjct: 156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP------------D 203

Query: 186 STDDDDHNKLNASAAVS 202
            +DD + +K  A+ + S
Sbjct: 204 VSDDSESSKKAAAPSES 220

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score =  120 bits (302), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 10/216 (4%)

Query: 6   PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLN 65
           P N T ILE    F+  I+LL  T V  Q+  QLN ++ G+T+FAPTDNAF+ L  GTLN
Sbjct: 36  PINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLN 95

Query: 66  TLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVT--SSGNSVNIS 123
           +L+  Q+  L+ +H++  Y   +      NP+RT A       + LN T  +  N VN+S
Sbjct: 96  SLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVS 155

Query: 124 TGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAK-PPAMAPAPAPLKPIKQNSTAVAD 182
           TG+  T +++ +     LAVY VD VLLP  +FG K  P  APAP          +  A 
Sbjct: 156 TGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAA- 214

Query: 183 GDDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMV 218
                 DD+H    +S   + +G+     LF  S++
Sbjct: 215 ------DDEHKSAGSSVKRTSLGIVVSFALFCCSVI 244

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL 67
           N T++L   G F  F+  L +T V +  + Q N+T  G+T+F P D+AF    +  L+ L
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query: 68  SDPQKELLIQFHVLSSYIPPTRFQTLRN--PLRTNAGTNSRYEYPLNVTSSGNSVNISTG 125
           +  Q + L+ FH L  Y   + F+ L    P+ T AG     +Y L  T    +V I + 
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG----QYSLKFTDVSGTVRIDSL 161

Query: 126 ITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
            T T VSS V+S   +AVYQV++VLLP +IFG
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           P+S+G +N T +LEK G    F  LL ++ V    E  +     G+TVFAP+D AF    
Sbjct: 183 PSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTVEK---GLTVFAPSDEAFKARG 238

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
              L  L+  +   L+++H L+ Y P    +T ++ + T A TN   +Y L  ++SG+ V
Sbjct: 239 VPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLA-TNGAGKYDLTTSTSGDEV 297

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPL 170
            + TG+  + ++  V  +  + ++ VD VLLP  +FG K  + APAP P+
Sbjct: 298 ILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFG-KSSSPAPAPEPV 346

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 8/164 (4%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGT-LNT 66
           N T+IL    +F+  + LL A+ V  + E   ++  +G+TVF PTD+AFS L S   L +
Sbjct: 207 NLTQILINGHNFNVALSLLVASGVITEFEN--DERGAGITVFVPTDSAFSDLPSNVNLQS 264

Query: 67  LSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSR--YEYPLNVTS-SGNSVNIS 123
           L   QK  +++FHVL SY      +++ NP++    T       Y LN++  +G+ V I+
Sbjct: 265 LPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTIN 324

Query: 124 TGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF--GAKPPAMAP 165
           +G+    V+   +    ++V+ V KVLLP  +F    +P A AP
Sbjct: 325 SGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAP 368

May be a cell surface adhesion protein that is required for normal cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 5/151 (3%)

Query: 7   TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNT 66
           +N T +LEK G  +F   LL ++ V    E  +     G+TVFAP+D AF       L  
Sbjct: 188 SNITGLLEKAGCKTF-ANLLVSSGVLKTYESAVEK---GLTVFAPSDEAFKAEGVPDLTK 243

Query: 67  LSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGI 126
           L+  +   L+++H L+ Y P    +T +N + T A TN   ++ L  ++SG+ V + TG+
Sbjct: 244 LTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLA-TNGAGKFDLTTSTSGDEVILHTGV 302

Query: 127 TNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             + ++  V     + ++ VD VLLP  +FG
Sbjct: 303 APSRLADTVLDATPVVIFTVDNVLLPAELFG 333

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 5/151 (3%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL 67
           N T I+   G   F   LL         +  L     G+TVF P D+A  G      N L
Sbjct: 186 NLTGIMSAHGCKVFAETLLTNPGASKTYQESLE---GGMTVFCPGDDAMKGFLPKYKN-L 241

Query: 68  SDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGIT 127
           + P+KE  + F  + +Y      ++   P+ T A T+   ++ L V + G  V + T I 
Sbjct: 242 TAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLA-TDGANKFELTVQNDGEKVTLKTRIN 300

Query: 128 NTSVSSIVYSDGQLAVYQVDKVLLPWSIFGA 158
              +   +  +  LA+Y  DKVLLP  +F A
Sbjct: 301 TVKIVDTLIDEQPLAIYATDKVLLPKELFKA 331

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
150416579	243	arabinogalactan protein 2 [Gossypium hir	0.937	0.864	0.552	7e-54
30841338	243	arabinogalactan protein [Gossypium hirsu	0.924	0.851	0.555	1e-52
47717925	238	fasciclin-like AGP 11 [Populus tremula x	0.754	0.710	0.580	5e-51
225435279	244	PREDICTED: fasciclin-like arabinogalacta	0.696	0.639	0.621	1e-50
21553523	246	arabinogalactan protein-like [Arabidopsi	0.75	0.682	0.610	2e-50
15242651	246	fasciclin-like arabinogalactan protein 1	0.75	0.682	0.610	2e-50
297810387	246	hypothetical protein ARALYDRAFT_487087 [	0.75	0.682	0.610	3e-50
150416581	264	arabinogalactan protein 3 [Gossypium hir	0.910	0.772	0.563	3e-50
147841991	214	hypothetical protein VITISV_022591 [Viti	0.696	0.728	0.615	8e-50
109150112	252	putative cell surface adhesion protein [	0.901	0.801	0.528	1e-49

>gi|150416579|gb|ABR68797.1| arabinogalactan protein 2 [Gossypium hirsutum] gi|157273636|gb|ABV27472.1| fasciclin-like arabinogalactan protein 1 [Gossypium hirsutum]

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/221 (55%), Positives = 160/221 (72%), Gaps = 11/221 (4%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           PA SGPTN TKILEK G F+ FIRLLK+T V +Q+  QLN++N+G+TVFAPTDNAFS L 
Sbjct: 32  PAPSGPTNVTKILEKAGQFTLFIRLLKSTQVANQLLGQLNNSNNGMTVFAPTDNAFSSLK 91

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
           SGTLN+L+D QK  L+QFH++ +Y+  ++FQT+ NPLRT AG +   ++PLNVT+SGNSV
Sbjct: 92  SGTLNSLTDEQKVQLVQFHIVPTYLTSSQFQTISNPLRTQAGDSGDGKFPLNVTTSGNSV 151

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAV 180
           NI+TG+TNTSVS  +Y+DGQLAVYQ+D+VL P  IF  +    APAPAP K   + +T V
Sbjct: 152 NITTGLTNTSVSGTIYTDGQLAVYQIDQVLQPLQIFAPR--PPAPAPAPAKSKNKKATTV 209

Query: 181 ADGDDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMVLAI 221
           AD  D T  D     N+ AA     +Q+V     A++V+A+
Sbjct: 210 ADSPDVTPAD-----NSKAAT----LQNVGLFGVAALVIAL 241

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30841338|gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum]

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 160/218 (73%), Gaps = 11/218 (5%)

Query: 4   SGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGT 63
           SGPTN TKILEK G F+ FIRLLK+T V +Q+  QLN++N+G+TVFAPTDNAFS L SGT
Sbjct: 35  SGPTNVTKILEKAGQFTLFIRLLKSTQVANQLLGQLNNSNNGMTVFAPTDNAFSSLKSGT 94

Query: 64  LNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNIS 123
           LN+L+D QK  L+QFH++ +Y+  ++FQT+ NPLRT AG +   ++PLN+T+SGNSVNI+
Sbjct: 95  LNSLTDEQKVELVQFHIVPTYLTSSQFQTISNPLRTQAGDSGDGKFPLNITTSGNSVNIT 154

Query: 124 TGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAVADG 183
           TG+TNTSVS  +Y+DGQLAVYQ+D+VL P  IF  +PPA APAPA  K   + +T VAD 
Sbjct: 155 TGLTNTSVSGTIYTDGQLAVYQIDQVLQPLQIFAPRPPAPAPAPA--KSKNKKATTVADS 212

Query: 184 DDSTDDDDHNKLNASAAVSLMGMQHVVFLFGASMVLAI 221
            D T  D     N+ AA     +Q+V     A++V+A+
Sbjct: 213 PDVTPAD-----NSKAAT----LQNVGLFGVAALVIAL 241

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47717925|gb|AAT37954.1| fasciclin-like AGP 11 [Populus tremula x Populus alba]

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/174 (58%), Positives = 130/174 (74%), Gaps = 5/174 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           PA SGPTN T IL K G F+  IRLLK+T   DQI  QLN++N G+TVFAPTDN+F+ L 
Sbjct: 30  PAPSGPTNITAILAKAGQFTTLIRLLKSTQEADQINTQLNNSNQGLTVFAPTDNSFANLK 89

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
           +GTLN+LSD QK  L+QFH+L +++  + FQT+ NPLRT AG ++  E+PLNVT+SGN V
Sbjct: 90  AGTLNSLSDQQKVQLVQFHILPNFLSMSNFQTVSNPLRTQAGNSADGEFPLNVTTSGNQV 149

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIK 174
           NI+TG+   +V++ +Y+DGQL VYQVD+VLLP  +FG      APAPAP KP K
Sbjct: 150 NITTGVDTATVANTIYTDGQLVVYQVDQVLLPLDLFGT-----APAPAPSKPEK 198

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435279|ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Vitis vinifera]

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 124/156 (79%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           PA SGPTN T+ILEK G ++  IRL+K T V DQI  QLN++N G+TVFAPTDNAFS L 
Sbjct: 29  PAPSGPTNITQILEKAGQYTILIRLMKGTQVADQINTQLNNSNQGLTVFAPTDNAFSTLK 88

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
           +GTLN+L+D QK  LIQFHV+ +++  ++FQT+ NPLRT AG ++  E+PLNVT+SGN V
Sbjct: 89  AGTLNSLTDQQKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQV 148

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
           N+STGI + +V++ VY+D QLAVYQVDKVLLP  IF
Sbjct: 149 NVSTGIVDATVANTVYTDNQLAVYQVDKVLLPLDIF 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553523|gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana]

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 131/172 (76%), Gaps = 4/172 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNS-GVTVFAPTDNAFSGL 59
           P  SGPTN T ILEK G F+ FIRLLK+T   DQI  QLN ++S G+TVFAPTDNAF+ L
Sbjct: 29  PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL 88

Query: 60  SSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
            SGTLN+LSD QK  L+QFHVL + I   +FQT+ NPLRT AG     ++PLN+TSSGN 
Sbjct: 89  KSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQ 148

Query: 120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLK 171
           VNI+TG+ + +V++ VYSD QLAVYQVD+VLLP ++FG+   ++APAPAP K
Sbjct: 149 VNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGS---SVAPAPAPEK 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242651|ref|NP_195937.1| fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana] gi|116247778|sp|Q8LEJ6.2|FLA11_ARATH RecName: Full=Fasciclin-like arabinogalactan protein 11; Flags: Precursor gi|13430542|gb|AAK25893.1|AF360183_1 putative arabinogalactan protein [Arabidopsis thaliana] gi|7413594|emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thaliana] gi|9757768|dbj|BAB08377.1| unnamed protein product [Arabidopsis thaliana] gi|14532750|gb|AAK64076.1| putative arabinogalactan protein [Arabidopsis thaliana] gi|332003180|gb|AED90563.1| fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana]

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 131/172 (76%), Gaps = 4/172 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNS-GVTVFAPTDNAFSGL 59
           P  SGPTN T ILEK G F+ FIRLLK+T   DQI  QLN ++S G+TVFAPTDNAF+ L
Sbjct: 29  PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL 88

Query: 60  SSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
            SGTLN+LSD QK  L+QFHVL + I   +FQT+ NPLRT AG     ++PLN+TSSGN 
Sbjct: 89  KSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQ 148

Query: 120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLK 171
           VNI+TG+ + +V++ VYSD QLAVYQVD+VLLP ++FG+   ++APAPAP K
Sbjct: 149 VNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGS---SVAPAPAPEK 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810387|ref|XP_002873077.1| hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata] gi|297318914|gb|EFH49336.1| hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 4/172 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNS-GVTVFAPTDNAFSGL 59
           P  SGPTN T ILEK G F+ FIRLLK+T   DQI  QLN ++S G+TVFAPTDNAF+ L
Sbjct: 29  PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL 88

Query: 60  SSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
            SGTLN+LSD QK  L+QFHVL + I   +FQT+ NPLRT AG     ++PLN+TSSGN 
Sbjct: 89  KSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQ 148

Query: 120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLK 171
           VNI+TG+ + +V++ VYSD QLAVYQVD+VLLP ++FG+   + APAPAP K
Sbjct: 149 VNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGS---SAAPAPAPEK 197

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|150416581|gb|ABR68798.1| arabinogalactan protein 3 [Gossypium hirsutum]

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/204 (56%), Positives = 149/204 (73%)

Query: 7   TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNT 66
           TN TKILEK G FS FIRL+KAT V +Q+  QLN+TN+G+T+FAP+D+AFS L SGTLN+
Sbjct: 55  TNVTKILEKAGQFSTFIRLMKATQVANQLLGQLNNTNNGITIFAPSDSAFSSLKSGTLNS 114

Query: 67  LSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGI 126
           LSD QK  LIQFH++ +Y+   +FQT+ NPLRT AG +   ++PLNVTSSG++VNI++G+
Sbjct: 115 LSDEQKVELIQFHIIPTYLSSAQFQTISNPLRTQAGDSGDGKFPLNVTSSGDTVNITSGL 174

Query: 127 TNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAVADGDDS 186
           TNTSVS  VY+DGQLAVYQ+D+VL P  IF  +PPA APAPA  K  K +  A +  DDS
Sbjct: 175 TNTSVSGTVYTDGQLAVYQIDRVLQPLQIFDPRPPAPAPAPAKSKKKKDDDVADSPADDS 234

Query: 187 TDDDDHNKLNASAAVSLMGMQHVV 210
           TD+    +      V L G+  +V
Sbjct: 235 TDNSKAVRFTIGNNVGLFGVTAIV 258

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841991|emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]

 Score =  202 bits (514), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 123/156 (78%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           PA SGPTN T+ILEK G ++  IRL+K T V DQI  QL ++N G+TVFAPTDNAFS L 
Sbjct: 13  PAPSGPTNITQILEKAGQYTILIRLMKGTQVADQINTQLXNSNQGLTVFAPTDNAFSTLK 72

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
           +GTLN+L+D QK  LIQFHV+ +++  ++FQT+ NPLRT AG ++  E+PLNVT+SGN V
Sbjct: 73  AGTLNSLTDQQKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQV 132

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
           N+STGI + +V++ VY+D QLAVYQVDKVLLP  IF
Sbjct: 133 NVSTGIVDATVANTVYTDNQLAVYQVDKVLLPLDIF 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109150112|emb|CAI99883.1| putative cell surface adhesion protein [Zinnia violacea]

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/208 (52%), Positives = 143/208 (68%), Gaps = 6/208 (2%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
           P  SGPTN TKILEK G F+  IRL+KAT + DQI  QLN++N G+TVFAPTDNAFS L 
Sbjct: 36  PGPSGPTNITKILEKAGQFTTLIRLMKATQLGDQINTQLNNSNQGMTVFAPTDNAFSSLK 95

Query: 61  SGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
            GTLN+LSD  K  L+QFHV+ +Y+  ++ QT+ NPLRT AG  +  ++PLNVT++GN V
Sbjct: 96  PGTLNSLSDQDKVSLLQFHVVPTYLTTSQLQTVSNPLRTQAGDTASNKFPLNVTAAGNQV 155

Query: 121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFGAKPPAMAPAPAPLKPIKQNSTAV 180
           N+STG+ +T VS+ +Y+DG LAVYQVDKVLLP S+FG   PA A      +P+K+  +  
Sbjct: 156 NVSTGVVDTPVSNSIYTDGTLAVYQVDKVLLPMSLFGTPAPAPA-----PEPLKKKKSGA 210

Query: 181 ADGDDSTDDDDHNKLNASAAVSLMGMQH 208
            DG  + DD   +  +AS AV      H
Sbjct: 211 EDGAPAKDDGSASA-DASGAVVFGSHWH 237

Source: Zinnia violacea

Species: Zinnia violacea

Genus: Zinnia

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
TAIR|locus:2175153	249	FLA12 "FASCICLIN-like arabinog	0.696	0.626	0.570	5e-44
TAIR|locus:2143443	246	FLA11 "FASCICLIN-like arabinog	0.700	0.638	0.569	2.5e-42
TAIR|locus:2024122	247	FLA9 "FASCICLIN-like arabinoog	0.700	0.635	0.407	1.8e-25
TAIR|locus:2167664	247	FLA13 "AT5G44130" [Arabidopsis	0.700	0.635	0.411	4.6e-25
TAIR|locus:2054769	247	FLA6 "FASCICLIN-like arabinoga	0.674	0.611	0.380	4.9e-21
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.678	0.598	0.358	2.8e-18
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.678	0.360	0.312	2.7e-15
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.678	0.361	0.310	1.5e-13
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.683	0.364	0.3	3.3e-13
TAIR|locus:2162197	424	FLA1 "FASCICLIN-like arabinoga	0.491	0.259	0.285	4.5e-07

TAIR|locus:2175153 FLA12 "FASCICLIN-like arabinogalactan-protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 89/156 (57%), Positives = 117/156 (75%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             PA  GPTN TKILEK G F+ FIRLLK+T V +Q+  QLN++++G+T+FAP+D++F    
Sbjct:    32 PAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLK 91

Query:    61 XXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
                     D Q+  LIQFHV+ SY+  + FQT+ NPLRT AG ++   +PLNVT+SGN+V
Sbjct:    92 AGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTV 151

Query:   121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
             NI++G+TNT+VS  VYSDGQLAVYQVDKVLLP  +F
Sbjct:   152 NITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2143443 FLA11 "FASCICLIN-like arabinogalactan-protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 90/158 (56%), Positives = 111/158 (70%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNS-GVTVFAPTDNAFXXX 59
             P  SGPTN T ILEK G F+ FIRLLK+T   DQI  QLN ++S G+TVFAPTDNAF   
Sbjct:    29 PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL 88

Query:    60 XXXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
                      D QK  L+QFHVL + I   +FQT+ NPLRT AG     ++PLN+TSSGN 
Sbjct:    89 KSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQ 148

Query:   120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             VNI+TG+ + +V++ VYSD QLAVYQVD+VLLP ++FG
Sbjct:   149 VNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 186

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2024122 FLA9 "FASCICLIN-like arabinoogalactan 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 64/157 (40%), Positives = 82/157 (52%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             P  +GP N T ILEK G F+ FI LL  T V  Q+  Q+N ++ G+TVFAPTDNAF    
Sbjct:    32 PEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLK 91

Query:    61 XXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
                        +  LI +HV   Y       ++ NP+RT A       Y LN T   N +
Sbjct:    92 PGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQI 151

Query:   121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             N+STG   T +S+ +     LAVY VD VLLP  +FG
Sbjct:   152 NVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFG 188

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2167664 FLA13 "AT5G44130" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 65/158 (41%), Positives = 86/158 (54%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             P  +GP N T ILEK G F   IRLL  T + +QI  Q+N ++ G+TV APTDNAF    
Sbjct:    29 PGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLK 88

Query:    61 XXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNA-GTNSRYEYPLNVTSSGNS 119
                        +  LI +HV   +       ++ NP+RT A G +    Y LN T  GN 
Sbjct:    89 PGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQ 148

Query:   120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             VN+STG+  T +S+ +  +  LAVY VD VLLP  +FG
Sbjct:   149 VNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFG 186

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2054769 FLA6 "FASCICLIN-like arabinogalactan 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 59/155 (38%), Positives = 82/155 (52%)

Query:     6 PTNFTKILEKVGH-FSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXXXXXX 64
             P N T ILE  GH F+  I+LL  T V  Q+  QLN ++ G+T+FAPTDNAF        
Sbjct:    36 PINLTAILE-AGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTL 94

Query:    65 XXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVT--SSGNSVNI 122
                   Q+  L+ +H++  Y   +      NP+RT A       + LN T  +  N VN+
Sbjct:    95 NSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNV 154

Query:   123 STGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             STG+  T +++ +     LAVY VD VLLP  +FG
Sbjct:   155 STGVVETRINNALRQQFPLAVYVVDSVLLPEELFG 189

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 57/159 (35%), Positives = 80/159 (50%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             PA     N T++L   G F  F+  L +T V +  + Q N+T  G+T+F P D+AF    
Sbjct:    40 PAPEN-VNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQK 98

Query:    61 XXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRN--PLRTNAGTNSRYEYPLNVTSSGN 118
                       Q + L+ FH L  Y   + F+ L    P+ T AG     +Y L  T    
Sbjct:    99 NPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG----QYSLKFTDVSG 154

Query:   119 SVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             +V I +  T T VSS V+S   +AVYQV++VLLP +IFG
Sbjct:   155 TVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 2.7e-15, P = 2.7e-15
 Identities = 49/157 (31%), Positives = 81/157 (51%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             P+S+G +N T +LEK G    F  LL ++ V    E   +    G+TVFAP+D AF    
Sbjct:   183 PSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFE---STVEKGLTVFAPSDEAFKARG 238

Query:    61 XXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSV 120
                       +   L+++H L+ Y P    +T ++ + T A TN   +Y L  ++SG+ V
Sbjct:   239 VPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLA-TNGAGKYDLTTSTSGDEV 297

Query:   121 NISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
              + TG+  + ++  V  +  + ++ VD VLLP  +FG
Sbjct:   298 ILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFG 334

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 49/158 (31%), Positives = 78/158 (49%)

Query:     1 PASSGP-TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXX 59
             PA S   +N T +LEK G    F  LL ++ V    E  +     G+TVFAP+D AF   
Sbjct:   181 PAPSASLSNITGLLEKAG-CKTFANLLVSSGVLKTYESAVE---KGLTVFAPSDEAFKAE 236

Query:    60 XXXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNS 119
                        +   L+++H L+ Y P    +T +N + T A TN   ++ L  ++SG+ 
Sbjct:   237 GVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLA-TNGAGKFDLTTSTSGDE 295

Query:   120 VNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIFG 157
             V + TG+  + ++  V     + ++ VD VLLP  +FG
Sbjct:   296 VILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFG 333

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 48/160 (30%), Positives = 81/160 (50%)

Query:     1 PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFXXXX 60
             P  +G  N T+IL    +F+  + LL A+ V  + E   ++  +G+TVF PTD+AF    
Sbjct:   201 PPPAG-INLTQILINGHNFNVALSLLVASGVITEFEN--DERGAGITVFVPTDSAFSDLP 257

Query:    61 XXXXXXXXDP-QKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRY--EYPLNVTS-S 116
                        QK  +++FHVL SY      +++ NP++    T       Y LN++  +
Sbjct:   258 SNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVN 317

Query:   117 GNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
             G+ V I++G+    V+   +    ++V+ V KVLLP  +F
Sbjct:   318 GSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2162197 FLA1 "FASCICLIN-like arabinogalactan 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 32/112 (28%), Positives = 51/112 (45%)

Query:    45 GVTVFAPTDNAFXXXXXXXXXXXXDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTN 104
             G+TVF P D+A              P+KE  + F  + +Y      ++   P+ T A T+
Sbjct:   220 GMTVFCPGDDAMKGFLPKYKNLTA-PKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLA-TD 277

Query:   105 SRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSIF 156
                ++ L V + G  V + T I    +   +  +  LA+Y  DKVLLP  +F
Sbjct:   278 GANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LEJ6	FLA11_ARATH	No assigned EC number	0.6104	0.75	0.6829	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.6__221__AT5G03170.1 annotation not avaliable (246 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	224
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	2e-21
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	2e-12
COG2335	187	COG2335, COG2335, Secreted and surface protein con	3e-06

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 85.4 bits (212), Expect = 2e-21
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 17/138 (12%)

Query: 17  GHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKEL-- 74
             FS F+ LLKA  + D     LN +    TVFAPTD AF+ L +GTLN L   +++L  
Sbjct: 1   PGFSTFVALLKAAGLVDT----LNGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKN 56

Query: 75  LIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSI 134
           L+++HV+   +  +  +     L T  G+       L V  +G +V     +    V   
Sbjct: 57  LLKYHVVPGRLTSSDLKNGGT-LATLQGS------KLRVNVTGGTVT----VNGARVVQS 105

Query: 135 VYSDGQLAVYQVDKVLLP 152
                   ++ +DKVLLP
Sbjct: 106 DIEATNGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 47  TVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSR 106
           TVFAPTD AF  L    LN+L   + + L+ +HV+   +           L T AG    
Sbjct: 1   TVFAPTDEAFQKLPPD-LNSLLADKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAG---- 54

Query: 107 YEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPW 153
               L +T SG S  ++  +    +     +     V+ +D+VLLP 
Sbjct: 55  --SKLRITRSGGSGTVT--VNGARIVEADIAATNGVVHVIDRVLLPP 97

Length = 97

>gnl|CDD|225214 COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 30/145 (20%)

Query: 17  GHFSFFIRLLKATTVRDQIERQLNDTNSG---VTVFAPTDNAFSGLSSGTLNTLSDPQ-K 72
             F+  +  LKA          L DT +     TVFAPT+ AF+ L +GTL+ L  P+ K
Sbjct: 58  PSFTTLVAALKA--------AGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENK 109

Query: 73  ELLIQ---FHVLSSYIPPTRFQTLRNPLR--TNAGTNSRYEYPLNVTSSGNSVNISTGIT 127
            LL +   +HV+         +     L+   +  T    +  + VT  G  VN +T   
Sbjct: 110 PLLTKILTYHVVEG-------KITAADLKSSGSVKTVQGADLKIKVTGGGVYVNDAT--- 159

Query: 128 NTSVSSIVYSDGQLAVYQVDKVLLP 152
             +++ I  S+G   ++ +DKVL+P
Sbjct: 160 -VTIADINASNG--VIHVIDKVLIP 181

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	224
COG2335	187	Secreted and surface protein containing fasciclin-	99.93
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.88
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.81
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.21
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.08

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=5.6e-26  Score=189.21  Aligned_cols=134  Identities=24%  Similarity=0.435  Sum_probs=115.7

Q ss_pred             cccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC----HHHHHHHhhhccc
Q 042775            6 PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS----DPQKELLIQFHVL   81 (224)
Q Consensus         6 ~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~----~~~l~~lL~yHVv   81 (224)
                      ..+|.+...++++|++|..+++.++|.++|++     .|.||||||||+||++|+.++++.|.    .+.+..+|.|||+
T Consensus        47 ~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~-----~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv  121 (187)
T COG2335          47 RADIVESAANNPSFTTLVAALKAAGLVDTLNE-----TGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVV  121 (187)
T ss_pred             hhHHHHHHccCcchHHHHHHHHhhhhHHHhcC-----CCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEE
Confidence            46788888899999999999999999999998     89999999999999999999998873    2457889999999


Q ss_pred             CCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeE-EeeeeeecCCeEEEEECccccCCCCC
Q 042775           82 SSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTS-VSSIVYSDGQLAVYQVDKVLLPWSIF  156 (224)
Q Consensus        82 p~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~-I~~~v~~~ng~vIh~ID~VLlP~~l~  156 (224)
                      ++.+..+++.. .+.++|+.|.      .++|...++.++|+    +++ +..++..+|| +||+||+||+|+...
T Consensus       122 ~Gk~~~~~l~~-~~~v~t~~G~------~~~i~~~~~~~~Vn----~a~v~~~di~a~Ng-vIhvID~Vl~Pp~~~  185 (187)
T COG2335         122 EGKITAADLKS-SGSVKTVQGA------DLKIKVTGGGVYVN----DATVTIADINASNG-VIHVIDKVLIPPMDL  185 (187)
T ss_pred             cCcccHHHhhc-cccceeecCc------eEEEEEcCCcEEEe----eeEEEeccEeccCc-EEEEEeeeccCCCcc
Confidence            99999999986 3679999987      56666666669986    345 4579999998 999999999998753

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.88  E-value=4.7e-23  Score=160.47  Aligned_cols=124  Identities=27%  Similarity=0.448  Sum_probs=93.3

Q ss_pred             CChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCC--CHHHHHHHhhhcccCCccCccccccCC
Q 042775           17 GHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL--SDPQKELLIQFHVLSSYIPPTRFQTLR   94 (224)
Q Consensus        17 ~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~yHVvp~~~s~~~l~~~s   94 (224)
                      |+||+|.++|+.+|+.+.|++    +.+.+|||||+|+||++++.+..+.+  ..+.+.++|+|||+++.++.++|....
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~----~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLND----SDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGC----SSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred             CCHHHHHHHHHHcCCHHHHhc----CCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence            579999999999999999942    26899999999999999865444444  457789999999999999999998642


Q ss_pred             Cceec-CCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECccccC
Q 042775           95 NPLRT-NAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVLLP  152 (224)
Q Consensus        95 ~~v~T-lag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VLlP  152 (224)
                      ..++| +.|.    .+.++....++.++|++   .++|. .++...|| +||+||+||+|
T Consensus        77 ~~~~t~~~g~----~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG-~ih~id~vL~P  128 (128)
T PF02469_consen   77 QTLETLLNGQ----PLRVSSSPSNGTIYVNG---KARIVKSDIEASNG-VIHIIDDVLIP  128 (128)
T ss_dssp             EEEEBSSTTC----EEEEEEEGGTTEEEECC---EEEESEEEEEESSE-EEEEESS-TSS
T ss_pred             ccceeccCCC----EEEEEEEecCCceEecC---ceEEEeCCEEeCCE-EEEEECceECc
Confidence            36888 5554    44444443378899875   46765 68888887 99999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.81  E-value=2.3e-20  Score=139.82  Aligned_cols=95  Identities=36%  Similarity=0.536  Sum_probs=77.6

Q ss_pred             EEEecCcHHHhcCCccccCCCCHH-HHHHHhhhcccCCccCccccccCCCceecCCCCCCCceeeEEEEecC--CEEEEe
Q 042775           47 TVFAPTDNAFSGLSSGTLNTLSDP-QKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSG--NSVNIS  123 (224)
Q Consensus        47 TvFAPtD~AF~~l~~~~l~~L~~~-~l~~lL~yHVvp~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g--~~V~v~  123 (224)
                      |||||+|+||+++....++.|..+ .++++|+|||++++++.++|.. ...++|+.|.      .+.++..+  +.+.++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~-~~~~~Tl~g~------~l~v~~~~~~~~i~in   73 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAGS------KLRVTRSGDSGTVTVN   73 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc-CCccccCCCC------EEEEEEeCCCCeEEEc
Confidence            899999999999987656666533 8899999999999999999986 3578999875      56666655  678886


Q ss_pred             eCceeeEE-eeeeeecCCeEEEEECccccCC
Q 042775          124 TGITNTSV-SSIVYSDGQLAVYQVDKVLLPW  153 (224)
Q Consensus       124 tg~~~a~I-~~~v~~~ng~vIh~ID~VLlP~  153 (224)
                      +    ++| ..++..+|| +||+||+||+|+
T Consensus        74 ~----~~v~~~di~~~nG-vih~Id~vL~P~   99 (99)
T smart00554       74 G----ARIVEADIAATNG-VVHVIDRVLLPP   99 (99)
T ss_pred             c----eEEEECCEecCCe-EEEEECceeCCC
Confidence            3    455 468999887 999999999995

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.21  E-value=1.2e-11  Score=120.58  Aligned_cols=131  Identities=18%  Similarity=0.242  Sum_probs=100.1

Q ss_pred             CcccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCCHHHHHHHhhhcccCCc
Q 042775            5 GPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSY   84 (224)
Q Consensus         5 ~~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yHVvp~~   84 (224)
                      ...+++++..++. .+++.|++.+-++.+.|..     ++.+|+|+|+|++|+.+.+...+    ...++||+|||++.+
T Consensus       372 ~~~~l~~La~e~~-~st~~rlv~elgll~~L~~-----n~e~t~~lp~n~~fd~~~~~~~r----~l~~qIL~~HII~~~  441 (682)
T KOG1437|consen  372 SLKNLMSLAREDE-ISTSMRLVAELGLLTALAP-----NDEATLLLPTNNLFDDLTPLESR----RLAEQILYNHIIPEY  441 (682)
T ss_pred             hHHHHHHHHhccc-ccHHHHHHHhccceEEEcC-----CCceEEeeehhhhccCCChhhhH----HHHHHHHHHhCcchh
Confidence            3578888888766 5999999999999887776     56699999999999997553222    237899999999999


Q ss_pred             cCccccccCCCceecCCCCCCCceeeEEEEecC-----CEEEEeeCceeeEEeeeeeecCCeEEEEECccccC
Q 042775           85 IPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSG-----NSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLP  152 (224)
Q Consensus        85 ~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g-----~~V~v~tg~~~a~I~~~v~~~ng~vIh~ID~VLlP  152 (224)
                      .+.++...++..++|+.+.    ++..-+.+.-     ..+.+++  ..+.+.+|+...|| +||.||+||.|
T Consensus       442 ~~~~~~y~~~~~v~t~g~~----~l~~fv~r~~~s~~~t~i~~~~--~~~Ii~aDi~~~nG-vvH~id~vl~p  507 (682)
T KOG1437|consen  442 LTSSSMYNGQTTVRTLGKN----KLLYFVYRHSVSANVTDILIGN--EACIIEADISVKNG-VVHIIDRVLDP  507 (682)
T ss_pred             hhhhhhhcccceeeccCCe----EEEEEEecccccccceeeeccc--eeeEEecccceecC-ceEEeeEEcCc
Confidence            9999998776688888775    4444444322     1233332  33345689999998 99999999999

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.08  E-value=4.8e-10  Score=109.62  Aligned_cols=131  Identities=17%  Similarity=0.236  Sum_probs=91.7

Q ss_pred             ccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC-HHHHHHHhhhcccCCcc
Q 042775            7 TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS-DPQKELLIQFHVLSSYI   85 (224)
Q Consensus         7 ~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~-~~~l~~lL~yHVvp~~~   85 (224)
                      .++.+.|++++++|.|.++++..++.++|..     .+.||+|+|||+||.+...+... +. ...+..+++||++++..
T Consensus       508 ~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~-----~~~~t~fvPt~ka~~~~~~~~~~-~~~~~~l~~~l~yH~v~~~~  581 (682)
T KOG1437|consen  508 VSLMEDLKTDGRISGTVQGLEGVLLPEELTP-----EGNYTLFVPTNKAWQKSTKDEKS-LFHKKALQDFLKYHLVPGQS  581 (682)
T ss_pred             ccHHHHHhhccchhhhHHhhhhcCChhhhcc-----CCceEEEeecccccccCCcchhh-cchHHHHHHHHHhcccccee
Confidence            7899999999999999999999999999966     89999999999999998664332 44 46689999999999866


Q ss_pred             CccccccCCCceecCCCCCCCceeeEEEEecCCEEEEe----eCcee-eEE-eeeeeecCCeEEEEECccccCCCCC
Q 042775           86 PPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNIS----TGITN-TSV-SSIVYSDGQLAVYQVDKVLLPWSIF  156 (224)
Q Consensus        86 s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~----tg~~~-a~I-~~~v~~~ng~vIh~ID~VLlP~~l~  156 (224)
                      .   |.-.+.+..+..       +.++.  .++.+.+.    +|..+ .++ ..++...|| ++|+||.||.|++++
T Consensus       582 ~---ls~~~~~~v~~~-------~k~s~--~~~~~~~~~~~~~~~vn~e~~~~~~i~~~n~-~~h~i~~vl~p~~l~  645 (682)
T KOG1437|consen  582 R---LSLGSSPYVMIQ-------VKLSL--RGDHLFFSLVNPRGDVNKERLVGIDIMGTNG-VVHVIDLVLKPPDLP  645 (682)
T ss_pred             e---eecccccceeee-------eeEEE--ecccEEeeeeccccceeeeeeeccceeeecc-eeEEEEEEcccCcch
Confidence            4   211111111110       12222  22222221    12222 233 368888897 999999999998654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	224
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	2e-10
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	3e-08
2vxp_A	132	Transforming growth factor-beta-induced protein IG	4e-08
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	2e-07
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	2e-06

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 17/132 (12%)

Query: 25  LLKATTVRDQIERQLNDTNSG--VTVFAPTDNAFSGLSSGTLNTLSDPQKEL--LIQFHV 80
           L  A + +   +  L DT +    TVFAPT+ AFS L + T++ L      L  ++ +HV
Sbjct: 43  LTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHV 102

Query: 81  LSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQ 140
           ++    P     +    +T  G        + VT  GNS+ +     +     +  ++  
Sbjct: 103 VAGQTSPA---NVVGTRQTLQGA------SVTVTGQGNSLKVGN--ADVVCGGVSTANA- 150

Query: 141 LAVYQVDKVLLP 152
             VY +D VL+P
Sbjct: 151 -TVYMIDSVLMP 161

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 23/150 (15%)

Query: 8   NFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL 67
           +  +     G F+  +   +A  + D +       +   TVFAPTD AF+ L  GT+  L
Sbjct: 4   DIVETATGAGSFTTLLTAAEAAGLVDTL-----KGDGPFTVFAPTDAAFAALPEGTVEDL 58

Query: 68  SDPQ-KELL---IQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGN-SVNI 122
             P+ KE L   + +HV+   +  +          T  G        L VT  G   VN 
Sbjct: 59  LKPENKEKLTEILTYHVVPGEVMSSDLTEGMT-AETVEGG------ALTVTLEGGPKVNG 111

Query: 123 STGITNTSVSSIVYSDGQLAVYQVDKVLLP 152
            +         +  S+G   ++ +D VL+P
Sbjct: 112 VSISQ----PDVDASNG--VIHVIDGVLMP 135

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 24/144 (16%)

Query: 12  ILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSG---VTVFAPTDNAFSGLSSGTLNTLS 68
           +L+    FS  +  +++          L +T +     TVFAPT+ AF  L     + L 
Sbjct: 7   VLKGDNRFSMLVAAIQSA--------GLTETLNREGVYTVFAPTNEAFRALPPRERSRLL 58

Query: 69  DPQKEL--LIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGI 126
              KEL  ++++H+    +       L   L++  G        L V+   N V++    
Sbjct: 59  GDAKELANILKYHIGDEILVSGGIGALVR-LKSLQGD------KLEVSLKNNVVSV--NK 109

Query: 127 TNTSVSSIVYSDGQLAVYQVDKVL 150
              +   I+ ++G   V+ +  VL
Sbjct: 110 EPVAEPDIMATNG--VVHVITNVL 131

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 26/158 (16%), Positives = 46/158 (29%), Gaps = 17/158 (10%)

Query: 6   PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAF----SGLSS 61
            T     LE     S   ++ K +   DQ    LN+T    T F P D  +        S
Sbjct: 158 YTTVLGKLESDPMMSDTYKMGKFSHFNDQ----LNNTQRRFTYFVPRDKGWQKTELDYPS 213

Query: 62  GTLNTLSDPQKELL---IQFHVLSSYIPPTRFQTLRNPLRTNAG--TNSRYEYPLNVTSS 116
                            ++ H+  S    T    ++    + +      R    + V   
Sbjct: 214 AHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEE 273

Query: 117 GNSVNISTGITNTSVSS--IVYSDGQLAVYQVDKVLLP 152
                I       +V    +  ++G   ++ +D  LL 
Sbjct: 274 AGRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLE 309

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 12/159 (7%)

Query: 1   PASSGPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS 60
            A +  T F +  ++        +  +             ++ + VT+ AP++ A+   +
Sbjct: 3   AADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAW---N 59

Query: 61  SGTLNTLSDPQKEL--LIQFHVLSSYIPPTRFQTLRNPLRTNAGT-NSRYEYPLNVTSSG 117
           S  +N +   + ++  ++  H++   +   + +     L     T N+      NV   G
Sbjct: 60  SSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEG 119

Query: 118 N--SVNISTGITNTSVSS--IVYSDGQLAVYQVDKVLLP 152
           +   + +  G  N +V    +  ++G   V+ +D VL  
Sbjct: 120 SDTVITVEGGGVNATVIQADVAQTNG--YVHIIDHVLGV 156

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	224
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.96
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.96
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.95
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.9

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.96  E-value=2.3e-30  Score=205.57  Aligned_cols=131  Identities=24%  Similarity=0.383  Sum_probs=114.3

Q ss_pred             cccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC----HHHHHHHhhhccc
Q 042775            6 PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS----DPQKELLIQFHVL   81 (224)
Q Consensus         6 ~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~----~~~l~~lL~yHVv   81 (224)
                      +.||.++|+++++||+|.++|+++|+.+.|++     .+++|||||+|+||++++.+.++.|.    .+.++++|+|||+
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv   76 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKG-----DGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVV   76 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTS-----SSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEE
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcC-----CCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEe
Confidence            46899999999999999999999999999987     78999999999999999887777773    4668999999999


Q ss_pred             CCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECccccCCC
Q 042775           82 SSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVLLPWS  154 (224)
Q Consensus        82 p~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VLlP~~  154 (224)
                      +++++.++|..+ ..++|+.|.      .|+|+..++ ++|++    ++|. .++.+.|| +||+||+||+|+.
T Consensus        77 ~~~~~~~~l~~~-~~~~tl~G~------~l~v~~~~g-v~vn~----a~v~~~di~~~NG-vIHvID~VL~P~s  137 (137)
T 1w7d_A           77 PGEVMSSDLTEG-MTAETVEGG------ALTVTLEGG-PKVNG----VSISQPDVDASNG-VIHVIDGVLMPGA  137 (137)
T ss_dssp             ESCCCTTTSCSS-EEEECTTSC------EEEEECTTS-CEETT----EECSBCCCBCSSS-EEEBCSSCCSSCC
T ss_pred             CcEEcHHHhcCC-CeeeccCCc------eEEEEecCC-EEEeC----cEEEECCeecCCe-EEEEECeeeCCCC
Confidence            999999999864 468999876      688888888 88863    5654 68999998 9999999999973

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.96  E-value=6.7e-29  Score=195.95  Aligned_cols=128  Identities=20%  Similarity=0.354  Sum_probs=111.0

Q ss_pred             ccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCC--CHHHHHHHhhhcccCCc
Q 042775            7 TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL--SDPQKELLIQFHVLSSY   84 (224)
Q Consensus         7 ~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~yHVvp~~   84 (224)
                      .+|.++|+++++||+|.++|+++|+.+.|++     .++||||||+|+||++++.+.++.|  ..+.++++|+|||+++.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~   76 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNR-----EGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEI   76 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHS-----SCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSC
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcC-----CCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCce
Confidence            4899999999999999999999999999997     7899999999999999988766665  46789999999999999


Q ss_pred             cCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEE-eeeeeecCCeEEEEECcccc
Q 042775           85 IPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSV-SSIVYSDGQLAVYQVDKVLL  151 (224)
Q Consensus        85 ~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I-~~~v~~~ng~vIh~ID~VLl  151 (224)
                      ++.++|... ..++|+.|.      .|.|+..++.++|++    ++| ..++.+.|| +||+||+||+
T Consensus        77 ~~~~~l~~~-~~~~tl~G~------~l~v~~~~~~v~vn~----a~v~~~di~a~NG-vIHvID~VLl  132 (132)
T 2vxp_A           77 LVSGGIGAL-VRLKSLQGD------KLEVSLKNNVVSVNK----EPVAEPDIMATNG-VVHVITNVLQ  132 (132)
T ss_dssp             CCSTTCSSC-EEEEBTTSS------EEEEEEETTEEEESS----CBEEEEEEEETTE-EEEEESSCC-
T ss_pred             eehhhccCC-ceEecCCCC------EEEEEEeCCEEEEec----cEEEEcceecCCE-EEEEECcEeC
Confidence            988888753 578999876      678888888899963    554 468999997 9999999986

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.95  E-value=8.6e-29  Score=202.43  Aligned_cols=129  Identities=25%  Similarity=0.401  Sum_probs=112.5

Q ss_pred             cccHHHHHHhCCChHHHHHHHH-----HCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC--HHHHHHHhhh
Q 042775            6 PTNFTKILEKVGHFSFFIRLLK-----ATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS--DPQKELLIQF   78 (224)
Q Consensus         6 ~~ni~~iL~~~~~fStf~~lL~-----~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~--~~~l~~lL~y   78 (224)
                      ..+|.++|+++++||+|.++|+     .+|+.+.|++     .+ ||||||+|+||++++.+.++.|.  .+.++++|+|
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~-----~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~y  100 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-----GQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTY  100 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-----SS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHH
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCC-----CC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHh
Confidence            3699999999999999999999     9999999987     66 99999999999999887777663  4778999999


Q ss_pred             cccCCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECccccCCC
Q 042775           79 HVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVLLPWS  154 (224)
Q Consensus        79 HVvp~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VLlP~~  154 (224)
                      ||++++++.++|.   +.++|+.|.      .|+|+..++.|+|++    ++|. .++...|| +||+||+||+|+.
T Consensus       101 Hvv~g~~~~~~l~---g~~~Tl~G~------~l~v~~~~~~v~vn~----a~V~~~di~a~NG-vIHvID~VL~P~~  163 (163)
T 1nyo_A          101 HVVAGQTSPANVV---GTRQTLQGA------SVTVTGQGNSLKVGN----ADVVCGGVSTANA-TVYMIDSVLMPPA  163 (163)
T ss_dssp             TEEESCCCTTTSC---EEEECTTSS------EEEEEECSSCEEETT----EECSSBCCCCSSE-EEBCBSSCCCCCC
T ss_pred             ceECCEEcHHHhC---CccccCCCC------EEEEEEECCEEEEec----cEEEECceEcCCE-EEEEECcEeCCCC
Confidence            9999999999997   479999875      688888888899863    6654 68889887 9999999999973

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.91  E-value=3.2e-25  Score=197.90  Aligned_cols=144  Identities=17%  Similarity=0.096  Sum_probs=114.7

Q ss_pred             cccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCC----ccccCCCCH---HHHHHHhhh
Q 042775            6 PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLS----SGTLNTLSD---PQKELLIQF   78 (224)
Q Consensus         6 ~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~----~~~l~~L~~---~~l~~lL~y   78 (224)
                      ..++.++|+++++|++|.++++.+|+.++|++    ..++||||||+|+||+++.    .+.++.|.+   +.++++|+|
T Consensus       158 ~~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~----~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~y  233 (324)
T 1o70_A          158 YTTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILER  233 (324)
T ss_dssp             CSCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHT
T ss_pred             hhhHHHHhhcCchHHHHHHHHHhhCHHHHhCC----CCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHh
Confidence            35899999999999999999999999877762    3689999999999999984    333445543   478999999


Q ss_pred             cccCC--ccCccccccCCC-----ceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECccc
Q 042775           79 HVLSS--YIPPTRFQTLRN-----PLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVL  150 (224)
Q Consensus        79 HVvp~--~~s~~~l~~~s~-----~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VL  150 (224)
                      ||+++  +|+.++|...++     .++|+. +    ++.+++++.|+.++|+.+..+++|. .++.+.|| +||+||+||
T Consensus       234 Hvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~----~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NG-vIHvID~VL  307 (324)
T 1o70_A          234 HLAISDKEYTMKDLVKFSQESGSVILPTFR-D----SLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG-IIHVIDYPL  307 (324)
T ss_dssp             TEEEESSCCCHHHHHHHHHHSSSEEEECSS-S----EEEEEEEEETTEEEEEETTEEEEEEEEEEEETTE-EEEEESSCS
T ss_pred             cEeCCcceEcHHHHhhhccCCCeeeeeccC-C----cEEEEEEecCCEEEEEecCceeEEEEcccccCCC-eEEEeceee
Confidence            99998  888888875432     388987 4    5667766678899997654567764 68999997 999999999


Q ss_pred             cCCCCCCCC
Q 042775          151 LPWSIFGAK  159 (224)
Q Consensus       151 lP~~l~~~~  159 (224)
                      +|++.....
T Consensus       308 ~P~~~~~~~  316 (324)
T 1o70_A          308 LEEKDVVVA  316 (324)
T ss_dssp             CCTTTTC--
T ss_pred             cCCcccccC
Confidence            999776443

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.90  E-value=5.3e-24  Score=189.98  Aligned_cols=137  Identities=19%  Similarity=0.276  Sum_probs=104.6

Q ss_pred             cccHHHHHH------hCCChHHHHHHHHHCC--CHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCC--CHHHHHHH
Q 042775            6 PTNFTKILE------KVGHFSFFIRLLKATT--VRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL--SDPQKELL   75 (224)
Q Consensus         6 ~~ni~~iL~------~~~~fStf~~lL~~t~--l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L--~~~~l~~l   75 (224)
                      ..||+++|+      ++++||+|.++|+++|  |.+.|++     .++||||||+|+||.++.   ++.|  ..+.++++
T Consensus         5 ~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~-----~~~~TvFAPtn~Af~~~~---~~~l~~~~~~l~~i   76 (324)
T 1o70_A            5 DTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSN---INNVLRDRNKMRQI   76 (324)
T ss_dssp             --------------CCHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTC---THHHHTCHHHHHHH
T ss_pred             hhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcC-----CCCeEEEEEChHhhhccc---HhhhhCCHHHHHHH
Confidence            578999998      6889999999999999  9999987     799999999999998763   3333  46788999


Q ss_pred             hhhcccCCccCccccccCCC----ceecCCCCCCCceeeEEEEec--CCEEEEeeCceeeEEe-eeeeecCCeEEEEECc
Q 042775           76 IQFHVLSSYIPPTRFQTLRN----PLRTNAGTNSRYEYPLNVTSS--GNSVNISTGITNTSVS-SIVYSDGQLAVYQVDK  148 (224)
Q Consensus        76 L~yHVvp~~~s~~~l~~~s~----~v~Tlag~~~~g~~~l~V~~~--g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~  148 (224)
                      |+|||++++++.++|....+    .++|+.|..   .+.++++.+  +..|++++|..+++|. .++..+|| +||+||+
T Consensus        77 L~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~---~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NG-vIhvID~  152 (324)
T 1o70_A           77 LNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNT---FLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG-YVHIIDH  152 (324)
T ss_dssp             HHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTC---EEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE-EEEEESS
T ss_pred             HHhcEeCCeecHHHHhhccCCCceEEEcCCCCc---eEEEEEeecCCceEEEEcCCceeEEEEeccccccCc-EEEEEch
Confidence            99999999999999876532    689999862   255677643  3568888776667764 68999997 9999999


Q ss_pred             cccCCC
Q 042775          149 VLLPWS  154 (224)
Q Consensus       149 VLlP~~  154 (224)
                      ||+|+.
T Consensus       153 VL~pp~  158 (324)
T 1o70_A          153 VLGVPY  158 (324)
T ss_dssp             CTTSCC
T ss_pred             hhhhch
Confidence            999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	224
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	9e-11
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	4e-10
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	4e-05

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 56.4 bits (135), Expect = 9e-11
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 20/157 (12%)

Query: 10  TKILEKV---GHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNT 66
           T +L K+      S   ++ K +   DQ    LN+T    T F P D  +        + 
Sbjct: 1   TTVLGKLESDPMMSDTYKMGKFSHFNDQ----LNNTQRRFTYFVPRDKGWQKTELDYPSA 56

Query: 67  LSDPQKEL-------LIQFHVLSSYIPPT--RFQTLRNPLRTNAGTNSRYEYPLNVTSSG 117
                          +++ H+  S    T            +      R    + V    
Sbjct: 57  HKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEA 116

Query: 118 NSVNISTGITNTSVSS--IVYSDGQLAVYQVDKVLLP 152
               I       +V    +  ++G   ++ +D  LL 
Sbjct: 117 GRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLE 151

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 54.0 bits (129), Expect = 4e-10
 Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 9/140 (6%)

Query: 17  GHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLI 76
           G    F  ++        +   +N   + VT+ AP++ A++  +   +    +  +++L 
Sbjct: 4   GALRKFYEVIMDNG--GAVLDDINSL-TEVTILAPSNEAWNSSNINNVLRDRNKMRQIL- 59

Query: 77  QFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVY 136
             H++   +   + +     L     T +     L     G   +    +    V++ V 
Sbjct: 60  NMHIIKDRLNVDKIRQKNANLIAQVPTVN-NNTFLYFNVRGEGSDTVITVEGGGVNATVI 118

Query: 137 SDGQLA----VYQVDKVLLP 152
                     V+ +D VL  
Sbjct: 119 QADVAQTNGYVHIIDHVLGV 138

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 25  LLKATTVRDQIERQLNDT-NSG-VTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLS 82
           L  A + +   +  L DT NSG  TVFAPT+ AFS L + T++ L      L        
Sbjct: 43  LTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHV 102

Query: 83  SYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLA 142
                +    +         +       + VT  GNS+ +     +     +  ++    
Sbjct: 103 VAGQTSPANVVGTRQTLQGAS-------VTVTGQGNSLKVGNA--DVVCGGVSTANA--T 151

Query: 143 VYQVDKVLLP 152
           VY +D VL+P
Sbjct: 152 VYMIDSVLMP 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	224
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.93
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.89
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.88

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=7e-27  Score=189.64  Aligned_cols=128  Identities=25%  Similarity=0.409  Sum_probs=109.4

Q ss_pred             ccHHHHHHhCCChHHHHHHHHH-----CCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC--HHHHHHHhhhc
Q 042775            7 TNFTKILEKVGHFSFFIRLLKA-----TTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS--DPQKELLIQFH   79 (224)
Q Consensus         7 ~ni~~iL~~~~~fStf~~lL~~-----t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~--~~~l~~lL~yH   79 (224)
                      .+|.+.++.+++||+|..+|+.     ++|.+.|+      .++||||||+|+||++++.+.++.|.  .+.++++|+||
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~------~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yH  101 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN------SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYH  101 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT------SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHT
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhc------CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhh
Confidence            4688999999999999999984     79999886      37899999999999999887776663  46789999999


Q ss_pred             ccCCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEE-eeeeeecCCeEEEEECccccCCC
Q 042775           80 VLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSV-SSIVYSDGQLAVYQVDKVLLPWS  154 (224)
Q Consensus        80 Vvp~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I-~~~v~~~ng~vIh~ID~VLlP~~  154 (224)
                      |++++++.+++.   +.++|+.|.      .+.|+..++.++|++    ++| ..+|...|| +||+||+||+|+.
T Consensus       102 Vv~g~~~~~~l~---~~~~Tl~G~------~l~v~~~~~~i~v~~----a~Vv~~di~a~NG-vIHvID~VLlPPa  163 (163)
T d1nyoa_         102 VVAGQTSPANVV---GTRQTLQGA------SVTVTGQGNSLKVGN----ADVVCGGVSTANA-TVYMIDSVLMPPA  163 (163)
T ss_dssp             EEESCCCTTTSC---EEEECTTSS------EEEEEECSSCEEETT----EECSSBCCCCSSE-EEBCBSSCCCCCC
T ss_pred             hhhhhhhhhhhh---hhhhhccCc------ceeEEecCCEEEEec----eEEEECCeecCCc-EEEEECccccCCC
Confidence            999999999885   357899876      678888888899853    565 468999997 9999999999973

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=1.2e-23  Score=163.72  Aligned_cols=130  Identities=18%  Similarity=0.239  Sum_probs=97.7

Q ss_pred             hCCChHHHHHHHHHCC--CHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCCHHHHHHHhhhcccCCccCcccccc
Q 042775           15 KVGHFSFFIRLLKATT--VRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSYIPPTRFQT   92 (224)
Q Consensus        15 ~~~~fStf~~lL~~t~--l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yHVvp~~~s~~~l~~   92 (224)
                      ++++|++|+++|+.+|  +.++|++     .+++|||||+|+||.++....+. ...+.++++|+|||+++.++.++|..
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~-----~~~~TvFAPtn~Af~~~~~~~~~-~~~~~l~~~l~yHiv~~~~~~~~l~~   75 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHIIKDRLNVDKIRQ   75 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEESSCCCHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHhcCChhhhc-CCHHHHHHHHHhhccCCeEEHHHHhc
Confidence            4567999999999997  5566776     68999999999999997653221 14577899999999999999988864


Q ss_pred             CC----CceecCCCCCCCceeeEEEEecC--CEEEEeeCceeeEE-eeeeeecCCeEEEEECccccCCC
Q 042775           93 LR----NPLRTNAGTNSRYEYPLNVTSSG--NSVNISTGITNTSV-SSIVYSDGQLAVYQVDKVLLPWS  154 (224)
Q Consensus        93 ~s----~~v~Tlag~~~~g~~~l~V~~~g--~~V~v~tg~~~a~I-~~~v~~~ng~vIh~ID~VLlP~~  154 (224)
                      ..    ..+.|+.|+   ..+..++...+  ..+.+..+...++| ..++.+.|| +||+||+||.||.
T Consensus        76 ~~~~~~~~~~t~~g~---~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NG-vIH~ID~VL~~P~  140 (140)
T d1o70a1          76 KNANLIAQVPTVNNN---TFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG-YVHIIDHVLGVPY  140 (140)
T ss_dssp             HTSSSCCCEEBSSTT---CEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE-EEEEESSCTTSCC
T ss_pred             CcccCceEeeecCCC---ceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCe-EEEEECCccCCcC
Confidence            32    246788776   23445555433  34555555566776 478999997 9999999999973

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.88  E-value=2.6e-23  Score=165.17  Aligned_cols=137  Identities=18%  Similarity=0.071  Sum_probs=101.7

Q ss_pred             ccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCcccc----CCCC---HHHHHHHhhhc
Q 042775            7 TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTL----NTLS---DPQKELLIQFH   79 (224)
Q Consensus         7 ~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l----~~L~---~~~l~~lL~yH   79 (224)
                      .+|.++|+.+++|+.|.++++.+|+.++|++    +.+.+|||||+|+||+++.....    +.+.   .+.++++|+||
T Consensus         1 ~Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~----~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~H   76 (157)
T d1o70a2           1 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERH   76 (157)
T ss_dssp             SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTT
T ss_pred             CcHHHHHHhCccHHHHHHHHHhCCHHHHHhC----CCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeE
Confidence            3789999999999999999999999988875    35789999999999999743211    2222   45678999999


Q ss_pred             ccCCccCccccc--c-----CCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECcccc
Q 042775           80 VLSSYIPPTRFQ--T-----LRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVLL  151 (224)
Q Consensus        80 Vvp~~~s~~~l~--~-----~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VLl  151 (224)
                      |+++........  .     ......|+.     +.+.+.+...++.+.+......++|. .++.+.|| +||+||+||+
T Consensus        77 iv~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NG-viHvID~VLl  150 (157)
T d1o70a2          77 LAISDKEYTMKDLVKFSQESGSVILPTFR-----DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG-IIHVIDYPLL  150 (157)
T ss_dssp             EEEESSCCCHHHHHHHHHHSSSEEEECSS-----SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTE-EEEEESSCSC
T ss_pred             EecccccchhhhhhhhhccCCceeEEecC-----CcEEEEEEcCCcEEEEecCCccceEEECCEecCCe-EEEEECceec
Confidence            999765433221  1     111233433     25677777778877766544567764 69999998 9999999999


Q ss_pred             CC
Q 042775          152 PW  153 (224)
Q Consensus       152 P~  153 (224)
                      |+
T Consensus       151 p~  152 (157)
T d1o70a2         151 EE  152 (157)
T ss_dssp             CT
T ss_pred             CC
Confidence            95