Citrus Sinensis ID: 042783

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-----
METQTQTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQN
ccccccccccccccccEEEEcccccccccccccHHHHHHccccccccccEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEccccccccHHHHHHHHHHcccEEEEEccccHHHHHcccccEEEEEccccccccccccccccccccccccCEEEccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEcccHHHHHHHHccccccccccccccEEECccccccHHHHHHHHHHccccEEECccccccccHHHHccccccccccccccccCCccccccEEEEEcccccccccccccccEEECcccccccccccHHHHHHcccccccCCccccEEEcccccEEEEccccHHHcccccccccHHHHHHHHHcccccEEEEEccccccccccEEEEEEccccccccHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHHHHHccc
****************IIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELR*********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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METQTQTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable 4-coumarate--CoA ligase 4 probableQ67W82
4-coumarate--CoA ligase probableO24540
4-coumarate--CoA ligase 2 probableO24146

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.2.-.-Forming carbon-sulfur bonds.probable
6.2.1.-Acid--thiol ligases.probable
6.2.1.124-coumarate--CoA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TSY, chain A
Confidence level:very confident
Coverage over the Query: 16-441
View the alignment between query and template
View the model in PyMOL