Citrus Sinensis ID: 042783

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-----
METQTQTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQN
ccccccccccccccccEEEEcccccccccccccHHHHHHccccccccccEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEccccccccHHHHHHHHHHcccEEEEEccccHHHHHcccccEEEEEccccccccccccccccccccccccEEEEccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEcccHHHHHHHHccccccccccccccEEEEccccccHHHHHHHHHHccccEEEEccccccccHHHHccccccccccccccccEEccccccEEEEEcccccccccccccccEEEEcccccccccccHHHHHHcccccccEEccccEEEcccccEEEEccccHHHcccccccccHHHHHHHHHcccccEEEEEccccccccccEEEEEEccccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHHHccc
ccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccEEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHcccccccEEEEEcccccEEEEEEccccccccHHHHccEEEcHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccEEEcccHHHHHHHHHcccccccccHHHHEEEcccccccHHHHHHHHHHccccEEEccccccccccEEEEEcccccccccccccccccEcccEEEEEEccccccccccccccEEEEccccHcccccccHHHHHHHcccccccccccEEEEcccccEEEEEccccEEEEccEEEcHHHHHHHHHHcccHcEEEEEEccccccccEEEEEEEccccccccHHHHHHHHHHHcHHcccccEEEEEHcccccccccEcHHHcccHHHHcccc
metqtqtqTQTKQQEEIIFrsklpdiyipkhlplhsycfeniskvasrpclingstgdvytygEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRgaiataanpfftpaetCKQAKASGAKLIITKASYVDKVKDLEEVKImcidsppdgclhfseltqadekdlphvgvMLTHKGLVTSVAqqvdgenpnlyftkedailCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKvtvapvvpPIVLAIAkspetekydlsSIRILKsgaaplgkeLEDAVRIklpnailgqgygmteaGPVLAMCLSFAkepfeikagacgtvvrnaemkivdpetgaslptnkpgeicirgdqimtgylndpeatkstidkegwlhtgdigyiddndeLFIVDRLKELIKYKGFQVAPAELEALLLSHssitdaavvpmkddaagevPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRvffidaipkapsgkILRKELRAKLAADYQN
metqtqtqtqtkqqeeiifRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIakspetekydlssiRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIvdpetgaslptnkpgeICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVffidaipkapsgkilrKELRAKLAADYQN
MetqtqtqtqtkqqeeIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKvtvapvvppivlaiaKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPaelealllSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQN
****************IIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVD***********PGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAP***I***************
******************FRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELR*********
***************EIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRA********
*****QTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLA*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METQTQTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query525 2.2.26 [Sep-21-2011]
O24145547 4-coumarate--CoA ligase 1 N/A no 0.990 0.950 0.733 0.0
O24146542 4-coumarate--CoA ligase 2 N/A no 0.977 0.946 0.746 0.0
P31684545 4-coumarate--CoA ligase 1 N/A no 0.984 0.948 0.717 0.0
P31685545 4-coumarate--CoA ligase 2 N/A no 0.982 0.946 0.716 0.0
Q9S725556 4-coumarate--CoA ligase 2 yes no 1.0 0.944 0.692 0.0
P14913544 4-coumarate--CoA ligase 1 N/A no 0.967 0.933 0.727 0.0
P14912544 4-coumarate--CoA ligase 1 N/A no 0.967 0.933 0.725 0.0
O24540553 4-coumarate--CoA ligase O N/A no 0.958 0.909 0.740 0.0
Q42524561 4-coumarate--CoA ligase 1 no no 0.986 0.923 0.712 0.0
P41636537 4-coumarate--CoA ligase O N/A no 0.96 0.938 0.652 0.0
>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/544 (73%), Positives = 460/544 (84%), Gaps = 24/544 (4%)

Query: 6   QTQTQTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEV 65
           +T T+TKQ  ++IFRSKLPDIYIPKHLPLHSYCFENIS+ +SRPCLING+   +YTY EV
Sbjct: 4   ETTTETKQSGDLIFRSKLPDIYIPKHLPLHSYCFENISEFSSRPCLINGANDQIYTYAEV 63

Query: 66  ELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCK 125
           ELT RK+A GLNKLGI Q+D IM+LLPN PEFVF+F+GASY GAI+T ANP FTPAE  K
Sbjct: 64  ELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVK 123

Query: 126 QAKASGAKLIITKASYVDKVKDL---EEVKIMCIDSPPDGCLHFSELTQADEKDLPHV-- 180
           QAKAS AK+IIT++ +V KVKD     +VK++CIDS P+GCLHFSELTQ+DE ++P V  
Sbjct: 124 QAKASSAKIIITQSCFVGKVKDYASENDVKVICIDSAPEGCLHFSELTQSDEHEIPEVKI 183

Query: 181 -------------------GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHI 221
                              GVMLTHKGLVTSVAQQVDGEN NLY   ED ++CVLPLFHI
Sbjct: 184 QPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHI 243

Query: 222 YALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYD 281
           Y+LNSI+LCGLR GAAILIMQKF+I   L+LI++YKV++ P VPPIVLAIAKSP  + YD
Sbjct: 244 YSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYD 303

Query: 282 LSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAG 341
           LSS+R + SGAAPLGKELEDAVR K PNA LGQGYGMTEAGPVLAMCL+FAKEPF+IK+G
Sbjct: 304 LSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSG 363

Query: 342 ACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHT 401
           ACGTVVRNAEMKIVDP+TG SLP N+PGEICIRGDQIM GYLNDPEAT  TIDKEGWLHT
Sbjct: 364 ACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHT 423

Query: 402 GDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEV 461
           GDIG+ID++DELFIVDRLKELIKYKGFQVAPAE+EALLL+H +I+DAAVVPMKD+ AGEV
Sbjct: 424 GDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEV 483

Query: 462 PVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAA 521
           PVAFVV+SN S ITEDE+K FISKQV+FYKR+ RVFF++ +PK+PSGKILRK+LRA+LAA
Sbjct: 484 PVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARLAA 543

Query: 522 DYQN 525
              N
Sbjct: 544 GVPN 547

Nicotiana tabacum (taxid: 4097)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 2
>sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1 Back     alignment and function description
>sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1 Back     alignment and function description
>sp|P31685|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1 Back     alignment and function description
>sp|Q9S725|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2 Back     alignment and function description
>sp|P14913|4CL2_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1 Back     alignment and function description
>sp|P14912|4CL1_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1 Back     alignment and function description
>sp|O24540|4CL_VANPL 4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1 Back     alignment and function description
>sp|Q42524|4CL1_ARATH 4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1 Back     alignment and function description
>sp|P41636|4CL_PINTA 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query525
166091748557 4-coumarate:CoA ligase 2 [Ruta graveolen 0.982 0.926 0.809 0.0
164523616557 4-coumarate CoA ligase 2 [Ruta graveolen 0.982 0.926 0.804 0.0
255543437544 AMP dependent CoA ligase, putative [Rici 0.986 0.952 0.780 0.0
294514718545 4-coumarate:CoA ligase 1 [Corchorus caps 0.967 0.932 0.793 0.0
55775693542 4-coumarate:CoA ligase [Betula platyphyl 0.980 0.950 0.755 0.0
219671340543 4-coumarate coenzyme A ligase [Paulownia 0.986 0.953 0.761 0.0
12229631547 RecName: Full=4-coumarate--CoA ligase 1; 0.990 0.950 0.733 0.0
346990426544 4-coumarate:CoA ligase [Petunia x hybrid 0.986 0.952 0.730 0.0
223006833548 4-coumarate:CoA ligase [Humulus lupulus] 0.975 0.934 0.749 0.0
37930570540 4-coumarate:coenzyme A ligase 2 [Salvia 0.965 0.938 0.751 0.0
>gi|166091748|gb|ABY81911.1| 4-coumarate:CoA ligase 2 [Ruta graveolens] Back     alignment and taxonomy information
 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/542 (80%), Positives = 473/542 (87%), Gaps = 26/542 (4%)

Query: 10  QTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTA 69
           +T+  E II+RSKLPDI IP HLPLHSYCF+NIS++A RPCLINGS G + TYGEVE TA
Sbjct: 16  RTQSDETIIYRSKLPDIDIPNHLPLHSYCFQNISRIADRPCLINGSNGHILTYGEVERTA 75

Query: 70  RKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKA 129
           R I +GLNKLG+GQRDVIMLLLPN PEFV +FLGASYRGA++TAANPFFT AE  KQ KA
Sbjct: 76  RSIGAGLNKLGVGQRDVIMLLLPNTPEFVLAFLGASYRGAVSTAANPFFTAAEIQKQVKA 135

Query: 130 SGAKLIITKASYVDKVKDLEEVKIMCIDSPPDGCLHFSELT--QADEKDLPHV------- 180
           SGAKLIIT+A +VDK+KD+ EVKIMCIDSPPDGCLHFSELT     E++L  V       
Sbjct: 136 SGAKLIITQACHVDKLKDIPEVKIMCIDSPPDGCLHFSELTDQSVQEEELEFVDSVEILP 195

Query: 181 -----------------GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYA 223
                            GVMLTHKGLVTSVAQQVDGENPNLYF  ED ILCVLPLFHIYA
Sbjct: 196 DDVVSLPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSEDVILCVLPLFHIYA 255

Query: 224 LNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLS 283
           LNSIMLC LRAGAAILIMQKFEINSLL+L ERYKVTVAPVVPPIVLA+AKSPE EKY+LS
Sbjct: 256 LNSIMLCSLRAGAAILIMQKFEINSLLRLTERYKVTVAPVVPPIVLAMAKSPEIEKYNLS 315

Query: 284 SIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGAC 343
           SIRILKSGAAPLGKELED VR K PNA LGQGYGMTEAGPVLAMCLSFAK+PFEIKAGAC
Sbjct: 316 SIRILKSGAAPLGKELEDVVRAKFPNATLGQGYGMTEAGPVLAMCLSFAKKPFEIKAGAC 375

Query: 344 GTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGD 403
           GTVVRNAEMKI+DPE+GASLP NKPGEICIRGDQIM GYLNDPEAT  TIDK+GWLHTGD
Sbjct: 376 GTVVRNAEMKIIDPESGASLPRNKPGEICIRGDQIMKGYLNDPEATNRTIDKDGWLHTGD 435

Query: 404 IGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPV 463
           +GYIDD++ELFIVDRLKELIKYKGFQVAPAELEALLLSHSSI+DAAVVPMKDD AGEVPV
Sbjct: 436 VGYIDDDEELFIVDRLKELIKYKGFQVAPAELEALLLSHSSISDAAVVPMKDDGAGEVPV 495

Query: 464 AFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADY 523
           AFVVKSN SQI+EDEIKQF+SKQVVFYKRI+RVFF+DAIPKAPSGKILRK+LRAKLAA Y
Sbjct: 496 AFVVKSNGSQISEDEIKQFVSKQVVFYKRISRVFFVDAIPKAPSGKILRKDLRAKLAAGY 555

Query: 524 QN 525
            N
Sbjct: 556 PN 557

Source: Ruta graveolens

Species: Ruta graveolens

Genus: Ruta

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|164523616|gb|ABY60843.1| 4-coumarate CoA ligase 2 [Ruta graveolens] Back     alignment and taxonomy information
>gi|255543437|ref|XP_002512781.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223547792|gb|EEF49284.1| AMP dependent CoA ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|294514718|gb|ADE95828.1| 4-coumarate:CoA ligase 1 [Corchorus capsularis] Back     alignment and taxonomy information
>gi|55775693|gb|AAV65114.1| 4-coumarate:CoA ligase [Betula platyphylla] Back     alignment and taxonomy information
>gi|219671340|gb|ACL31667.1| 4-coumarate coenzyme A ligase [Paulownia fortunei] Back     alignment and taxonomy information
>gi|12229631|sp|O24145.1|4CL1_TOBAC RecName: Full=4-coumarate--CoA ligase 1; Short=4CL 1; AltName: Full=4-coumaroyl-CoA synthase 1 gi|1663722|gb|AAB18637.1| 4-coumarate:coenzyme A ligase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|346990426|gb|AEO52694.1| 4-coumarate:CoA ligase [Petunia x hybrida] Back     alignment and taxonomy information
>gi|223006833|gb|ACM69363.1| 4-coumarate:CoA ligase [Humulus lupulus] Back     alignment and taxonomy information
>gi|37930570|gb|AAP68991.1| 4-coumarate:coenzyme A ligase 2 [Salvia miltiorrhiza] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query525
TAIR|locus:2094716556 4CL2 "4-coumarate:CoA ligase 2 0.691 0.652 0.726 1e-191
TAIR|locus:2017602561 4CL1 "4-coumarate:CoA ligase 1 0.653 0.611 0.764 1.3e-191
TAIR|locus:2015003561 4CL3 "4-coumarate:CoA ligase 3 0.651 0.609 0.644 8.9e-169
TAIR|locus:2094771570 4CL5 "4-coumarate:CoA ligase 5 0.649 0.598 0.670 3.5e-165
TAIR|locus:2115673544 AT4G05160 [Arabidopsis thalian 0.622 0.601 0.440 2.4e-91
DICTYBASE|DDB_G0284745551 4cl2 "4-coumarate-CoA ligase" 0.624 0.595 0.418 1.7e-80
DICTYBASE|DDB_G0284831551 4cl1 "4-coumarate-CoA ligase" 0.624 0.595 0.407 5.2e-79
DICTYBASE|DDB_G0284743551 4cl3 "4-coumarate-CoA ligase" 0.624 0.595 0.407 3.2e-77
TAIR|locus:2034392546 OPCL1 "OPC-8:0 CoA ligase1" [A 0.758 0.728 0.362 1.4e-74
UNIPROTKB|Q5LVA1535 fadD "4-coumarate:CoA ligase" 0.925 0.908 0.341 4.6e-73
TAIR|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1338 (476.1 bits), Expect = 1.0e-191, Sum P(2) = 1.0e-191
 Identities = 268/369 (72%), Positives = 295/369 (79%)

Query:   158 SPPDG-CLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVL 216
             SP D   L FS  T      LP  GVMLTHKGLVTSVAQQVDGENPNLYF ++D ILCVL
Sbjct:   193 SPEDVVALPFSSGTTG----LPK-GVMLTHKGLVTSVAQQVDGENPNLYFNRDDVILCVL 247

Query:   217 PLFHIYALNSIMLCGLRAGAAILIMQKFEINSLLQLIERYKXXXXXXXXXXXXXXXKSPE 276
             P+FHIYALNSIMLC LR GA ILIM KFEI  LL+ I+R K               KSPE
Sbjct:   248 PMFHIYALNSIMLCSLRVGATILIMPKFEITLLLEQIQRCKVTVAMVVPPIVLAIAKSPE 307

Query:   277 TEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPF 336
             TEKYDLSS+R++KSGAAPLGKELEDA+  K PNA LGQGYGMTEAGPVLAM L FAKEPF
Sbjct:   308 TEKYDLSSVRMVKSGAAPLGKELEDAISAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPF 367

Query:   337 EIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKE 396
              +K+GACGTVVRNAEMKI+DP+TG SLP NKPGEICIRG+QIM GYLNDP AT STIDK+
Sbjct:   368 PVKSGACGTVVRNAEMKILDPDTGDSLPRNKPGEICIRGNQIMKGYLNDPLATASTIDKD 427

Query:   397 GWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPXXXXXXXXSHSSITDAAVVPMKDD 456
             GWLHTGD+G+IDD+DELFIVDRLKELIKYKGFQVAP         H  I D AVV MK++
Sbjct:   428 GWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEE 487

Query:   457 AAGEVPVAFVVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELR 516
              AGEVPVAFVV+S DS I+EDEIKQF+SKQVVFYKRIN+VFF D+IPKAPSGKILRK+LR
Sbjct:   488 DAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLR 547

Query:   517 AKLAADYQN 525
             A+LA    N
Sbjct:   548 ARLANGLMN 556
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009411 "response to UV" evidence=IEP
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0009620 "response to fungus" evidence=IEP
GO:0009698 "phenylpropanoid metabolic process" evidence=TAS
GO:0016207 "4-coumarate-CoA ligase activity" evidence=IDA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA
TAIR|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015003 4CL3 "4-coumarate:CoA ligase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094771 4CL5 "4-coumarate:CoA ligase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284745 4cl2 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284831 4cl1 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284743 4cl3 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2034392 OPCL1 "OPC-8:0 CoA ligase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LVA1 fadD "4-coumarate:CoA ligase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54P784CL2_DICDI6, ., 2, ., 1, ., 1, 20.38710.93900.8947yesno
P316854CL2_SOLTU6, ., 2, ., 1, ., 1, 20.71660.98280.9467N/Ano
P149134CL2_PETCR6, ., 2, ., 1, ., 1, 20.72740.96760.9338N/Ano
P149124CL1_PETCR6, ., 2, ., 1, ., 1, 20.72550.96760.9338N/Ano
Q9S7254CL2_ARATH6, ., 2, ., 1, ., 1, 20.69241.00.9442yesno
Q67W824CL4_ORYSJ6, ., 2, ., 1, ., 1, 20.63650.96190.9033yesno
O241454CL1_TOBAC6, ., 2, ., 1, ., 1, 20.73340.99040.9506N/Ano
O241464CL2_TOBAC6, ., 2, ., 1, ., 1, 20.74670.97710.9464N/Ano
P416364CL_PINTA6, ., 2, ., 1, ., 1, 20.65280.960.9385N/Ano
Q425244CL1_ARATH6, ., 2, ., 1, ., 1, 20.71270.98660.9233nono
O245404CL_VANPL6, ., 2, ., 1, ., 1, 20.74060.95800.9095N/Ano
O07610LCFB_BACSU6, ., 2, ., 1, ., 30.30900.84190.8615yesno
P316844CL1_SOLTU6, ., 2, ., 1, ., 1, 20.71710.98470.9486N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.983
4th Layer6.2.1.120.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query525
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 0.0
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 0.0
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 0.0
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-136
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-134
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 1e-133
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 1e-119
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-115
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-110
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-108
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-108
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-106
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 2e-98
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 6e-96
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 2e-85
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 2e-82
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 5e-82
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 4e-81
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 3e-77
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 1e-76
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-76
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 6e-76
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 6e-75
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 3e-74
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 8e-73
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 5e-72
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 8e-71
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4e-70
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-69
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 1e-68
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 2e-68
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 8e-68
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 9e-66
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 1e-64
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 5e-64
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 3e-63
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-62
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 2e-62
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 5e-62
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 2e-60
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-60
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 6e-60
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 1e-58
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 2e-58
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 3e-58
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 7e-58
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 3e-56
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 7e-55
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 1e-54
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 1e-54
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 3e-54
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 4e-54
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 1e-52
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 8e-52
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 2e-51
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 9e-51
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 4e-50
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 3e-49
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 4e-48
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 4e-48
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 5e-48
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 9e-47
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 2e-46
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 1e-44
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 3e-44
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 4e-44
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 4e-44
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 7e-44
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 8e-44
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 5e-43
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 5e-42
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 9e-42
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 6e-41
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 1e-40
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 2e-40
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 2e-40
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 3e-40
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 3e-40
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 6e-40
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 9e-40
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 6e-39
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 2e-38
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 1e-37
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 6e-37
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 2e-36
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 4e-36
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 5e-36
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 9e-36
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 2e-35
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 2e-35
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 7e-35
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 1e-34
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 1e-34
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 7e-34
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 2e-33
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 5e-33
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 5e-33
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 1e-31
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 1e-31
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 2e-31
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 3e-31
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 1e-30
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 1e-30
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 1e-30
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 2e-30
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 3e-30
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 1e-29
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 6e-29
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 1e-28
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 2e-28
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 2e-27
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 9e-27
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 2e-26
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 3e-26
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-26
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 7e-26
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 1e-25
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 1e-25
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-25
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 5e-25
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 2e-24
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 2e-24
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 2e-23
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 6e-23
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 6e-23
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 9e-22
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 1e-21
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 9e-21
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-20
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 1e-20
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 1e-20
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 1e-20
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 3e-20
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 5e-20
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 8e-20
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 9e-20
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 3e-19
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 3e-19
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 6e-19
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 1e-18
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 2e-18
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 4e-18
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 1e-17
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 2e-17
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 2e-17
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 9e-17
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 9e-16
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 1e-15
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 1e-15
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 3e-15
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 2e-14
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 3e-14
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 5e-14
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 1e-13
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 3e-13
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 2e-12
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 3e-12
cd05905556 cd05905, Dip2, Disco-interacting protein 2 (Dip2) 1e-11
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 3e-10
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 5e-10
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 2e-09
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 2e-09
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 2e-09
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 4e-09
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 6e-09
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 9e-09
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-08
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 1e-08
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 8e-08
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 3e-07
pfam1319343 pfam13193, DUF4009, Domain of unknown function (DU 4e-07
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 1e-06
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 1e-06
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 2e-06
COG1541438 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme 3e-06
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 2e-05
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 2e-05
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 1e-04
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 3e-04
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-04
cd05913424 cd05913, PaaK, Phenylacetate-CoA ligase (also know 4e-04
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 5e-04
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 0.001
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information 
 Score = 1060 bits (2743), Expect = 0.0
 Identities = 404/536 (75%), Positives = 461/536 (86%), Gaps = 24/536 (4%)

Query: 10  QTKQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTA 69
           +    EE IFRSKLPDIYIP HLPLH YCFE +S+ + RPCLI+G+TG VYTY +VEL +
Sbjct: 1   EASASEEFIFRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLS 60

Query: 70  RKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKA 129
           R++A+GL+KLGI Q DV+MLLLPN PEFV +FLGAS RGA+ T ANPF+TPAE  KQAKA
Sbjct: 61  RRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKA 120

Query: 130 SGAKLIITKASYVDKVKDL---EEVKIMCIDSPPDGCLHFSELTQADEKDLPHV------ 180
           SGAKLIIT++ YVDK+K L   + V ++ ID PP+GCLHFSELTQADE +LP V      
Sbjct: 121 SGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQADENELPEVEISPDD 180

Query: 181 ---------------GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALN 225
                          GVMLTHKGLVTSVAQQVDGENPNLYF  +D ILCVLP+FHIY+LN
Sbjct: 181 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLN 240

Query: 226 SIMLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSI 285
           S++LCGLR GAAILIM KFEI +LL+LI+R+KVT+AP VPPIVLAIAKSP  EKYDLSSI
Sbjct: 241 SVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSI 300

Query: 286 RILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGT 345
           R++ SGAAPLGKELEDA R KLPNA+LGQGYGMTEAGPVLAMCL+FAKEPF +K+G+CGT
Sbjct: 301 RMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT 360

Query: 346 VVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIG 405
           VVRNAE+KIVDPETGASLP N+PGEICIRG QIM GYLNDPEAT +TIDK+GWLHTGDIG
Sbjct: 361 VVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIG 420

Query: 406 YIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAF 465
           YIDD+DELFIVDRLKELIKYKGFQVAPAELEALL+SH SI DAAVVPMKD+ AGEVPVAF
Sbjct: 421 YIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAF 480

Query: 466 VVKSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAA 521
           VV+SN S+ITEDEIKQF++KQVVFYKRI++VFF+D+IPKAPSGKILRK+LRAKLAA
Sbjct: 481 VVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536

Length = 537
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|224458 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213281 cd05913, PaaK, Phenylacetate-CoA ligase (also known as PaaK) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 525
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02654666 acetate-CoA ligase 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.97
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.95
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.92
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.9
PRK09188365 serine/threonine protein kinase; Provisional 99.89
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.86
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.55
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.37
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.6
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 97.96
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.49
PLN02249597 indole-3-acetic acid-amido synthetase 97.0
PLN02620612 indole-3-acetic acid-amido synthetase 96.86
PLN02247606 indole-3-acetic acid-amido synthetase 96.82
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 94.9
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 88.03
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 87.06
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 86.69
PLN02736 651 long-chain acyl-CoA synthetase 80.95
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-77  Score=587.88  Aligned_cols=470  Identities=42%  Similarity=0.683  Sum_probs=413.8

Q ss_pred             cCCCc-cEEEeCC-CCCeEeHHHHHHHHHHHHHHHHHCC--CCCCCEEEEECCCchhHHHHHHHHHHhCCeEeecCCCCC
Q 042783           44 KVASR-PCLINGS-TGDVYTYGEVELTARKIASGLNKLG--IGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFT  119 (525)
Q Consensus        44 ~~p~~-~a~~~~~-~~~~~Ty~el~~~~~~~a~~L~~~g--i~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~  119 (525)
                      ..+++ +.+++.. +|+.+||+|+++++.++|.+|.++|  +++||+|++++||+++++.+++||+.+|+++.+++|.+.
T Consensus        28 ~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~  107 (537)
T KOG1176|consen   28 VYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLT  107 (537)
T ss_pred             ccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccC
Confidence            33444 6666653 2699999999999999999999875  899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCccEEEECccchHHHhccc---CcEEEEecCC--------------------CC--CC-------cccc
Q 042783          120 PAETCKQAKASGAKLIITKASYVDKVKDLE---EVKIMCIDSP--------------------PD--GC-------LHFS  167 (525)
Q Consensus       120 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~--------------------~~--~~-------~~~~  167 (525)
                      ..++.++++.+++++++++....+.+.+..   ...++.+...                    ..  ..       .+-.
T Consensus       108 ~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~  187 (537)
T KOG1176|consen  108 ASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPVSEDDTA  187 (537)
T ss_pred             HHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccCCCCCeE
Confidence            999999999999999999998877664432   1222222211                    00  00       2233


Q ss_pred             cccccCCCCCCCceeEcchHHHHHHHHHhhhcCCCCCccCCCcEEEEecchhhHHHHHHHHHHHHHhCCeEEEecCCCHH
Q 042783          168 ELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAILIMQKFEIN  247 (525)
Q Consensus       168 ~~~~~~~~~~~~~~v~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~  247 (525)
                      .+..++++++.||||++||+++..........    ..+...++.++.+|++|.+|+...+...+..|++++....+++.
T Consensus       188 ~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~----~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~  263 (537)
T KOG1176|consen  188 AILYSSGTTGLPKGVVLSHRNLIANTLSIKIG----WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAE  263 (537)
T ss_pred             EEecCCCCCCCCceEEEecHHHHHHHHHhhhc----ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHH
Confidence            45667888899999999999998887655552    23567899999999999999955555566667777777778999


Q ss_pred             HHHHHHHhcCceEeecchHHHHHHHcCCCCCCcCcccceeEeeecCCCcHHHHHHHHHHCCCCeeeccccccccccchhc
Q 042783          248 SLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAM  327 (525)
Q Consensus       248 ~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~  327 (525)
                      .+++.+++|++|+++++|.++..|++.+.....++++++.+.+||+++++++.+++.+.+|...+.+.||+||++..++.
T Consensus       264 ~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~  343 (537)
T KOG1176|consen  264 LFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITS  343 (537)
T ss_pred             HHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceee
Confidence            99999999999999999999999999987777899999999999999999999999999977999999999999977766


Q ss_pred             ccccCCCCcccCCCccccccCCceEEEEcCCCCCCCCCCCCeEEEEecccccccccCChhhhhcccCCCCceecCceEEE
Q 042783          328 CLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYI  407 (525)
Q Consensus       328 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~  407 (525)
                      +...   +. ..++++|++++++...+.+ ++|+.++.++.||||++|+.++.||+++|+.|+..|+++|||+|||+|++
T Consensus       344 ~~~~---~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~  418 (537)
T KOG1176|consen  344 NDWG---PE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYF  418 (537)
T ss_pred             cCCC---cc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEE
Confidence            5211   11 4799999999988888888 89999999999999999999999999999999999977799999999999


Q ss_pred             cCCCcEEEEccccceeeeCCeeeChHHHHHHHhcCCCcceEEEecccCCCCCCeEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 042783          408 DDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQITEDEIKQFISKQV  487 (525)
Q Consensus       408 ~~dg~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l  487 (525)
                      |+||+|++.+|++|+||.+|.+|+|.|||++|.+||.|.|++|++.+|+..|+.++|+|+..++..++++++.++++++|
T Consensus       419 D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l  498 (537)
T KOG1176|consen  419 DEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKL  498 (537)
T ss_pred             cCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccEEEEeccCCCCCCCcccHHHHHHHHHhh
Q 042783          488 VFYKRINRVFFIDAIPKAPSGKILRKELRAKLAAD  522 (525)
Q Consensus       488 ~~~~~p~~i~~~~~~P~t~~GKv~r~~l~~~~~~~  522 (525)
                      ++|++|..++|+++||+|++|||+|+.|++.|.+.
T Consensus       499 ~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~  533 (537)
T KOG1176|consen  499 PAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL  533 (537)
T ss_pred             ChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999764

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query525
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 0.0
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 0.0
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 1e-62
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 1e-62
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 1e-62
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 8e-61
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-60
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 4e-60
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 5e-60
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 3e-59
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 2e-41
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 4e-37
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 2e-30
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 5e-30
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 3e-27
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 7e-27
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 2e-26
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 3e-26
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 4e-26
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 9e-26
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 1e-24
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 1e-23
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 1e-23
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 6e-23
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 5e-22
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 1e-21
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 1e-17
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 1e-17
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 1e-17
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 4e-17
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 2e-16
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 2e-16
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 5e-16
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 5e-16
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 8e-15
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 3e-14
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 6e-13
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 7e-13
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 8e-13
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 5e-11
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 7e-11
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 2e-10
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 2e-09
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 4e-09
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 8e-09
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 1e-08
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 2e-08
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 2e-08
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 3e-08
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 3e-08
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 3e-08
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 1e-07
3t5a_A480 Crystal Structure Of N-Terminal Domain Of Faal28 G3 3e-07
3e53_A480 Crystal Structure Of N-Terminal Domain Of A Fatty A 3e-07
4dg8_A 620 Structure Of Pa1221, An Nrps Protein Containing Ade 5e-05
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/528 (72%), Positives = 425/528 (80%), Gaps = 24/528 (4%)
Query: 18  IFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLN 77
           IFRSKLPDIYIPK+LPLHSY  EN+S  +S+PCLING+ GDVYTY +VELTAR++ASGLN
Sbjct: 8   IFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLN 67
Query: 78  KLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIIT 137
           K+GI Q DVIML LP+ PEFV +FLGAS+RGAI TAANPF TPAE  K AKAS AKL+IT
Sbjct: 68  KIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLIT 127
Query: 138 KASYVDKVKDL---EEVKIMCIDSPPDGCLHFSELTQADEKDLPHV-------------- 180
           +A Y +KVKD     +VK+MC+DS PDGCLHFSELTQADE + P V              
Sbjct: 128 QACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELTQADENEAPQVDISPDDVVALPYSS 187
Query: 181 -------GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLR 233
                  GVMLTHKGL+TSVAQQVDG+NPNLYF  ED ILCVLP+FHIYALNSIMLCGLR
Sbjct: 188 GTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLR 247
Query: 234 AGAAILIMQKFEINSLLQLIERYKXXXXXXXXXXXXXXXKSPETEKYDLSSIRILKSGAA 293
            GA ILIM KFEI SLL LIE+YK               KSP+ +K+DLSS+R++KSG A
Sbjct: 248 VGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGA 307
Query: 294 PLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMK 353
           PLGKELED VR K P A LGQGYGMTEAGPVLAMCL+FAKEPF+IK GACGTVVRNAEMK
Sbjct: 308 PLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMK 367
Query: 354 IVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYIDDNDEL 413
           IVDPETGASLP N+PGEICIRGDQIM GYLNDPEAT  TIDKEGWLHTGDIGYIDD+DEL
Sbjct: 368 IVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDEL 427
Query: 414 FIVDRLKELIKYKGFQVAPXXXXXXXXSHSSITDAAVVPMKDDAAGEVPVAFVVKSNDSQ 473
           FIVDRLKELIKYKGFQVAP        +H  I+DAAVV +KD+ AGEVPVAFVVKS  SQ
Sbjct: 428 FIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQ 487
Query: 474 ITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAA 521
            TEDEIKQ+ISKQV+FYKRI RVFFI+AIPKAPSGKILRK L+ KLA 
Sbjct: 488 ATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG 535
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|3T5A|A Chain A, Crystal Structure Of N-Terminal Domain Of Faal28 G330w Mutant From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure
>pdb|3E53|A Chain A, Crystal Structure Of N-Terminal Domain Of A Fatty Acyl Amp Ligase Faal28 From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query525
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 0.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 0.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 0.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 0.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 0.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-151
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-141
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-139
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-133
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-132
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-130
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-130
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-130
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-129
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-126
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 7e-90
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 2e-86
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 8e-74
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 4e-70
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-67
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 2e-55
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 5e-26
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 9e-26
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 2e-25
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 5e-25
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 3e-24
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 6e-22
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 2e-19
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 7e-17
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 1e-16
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 7e-15
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 4e-08
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 2e-07
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
 Score =  788 bits (2038), Expect = 0.0
 Identities = 403/534 (75%), Positives = 450/534 (84%), Gaps = 24/534 (4%)

Query: 12  KQQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARK 71
             QEE IFRSKLPDIYIPK+LPLHSY  EN+S  +S+PCLING+ GDVYTY +VELTAR+
Sbjct: 2   NPQEEFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARR 61

Query: 72  IASGLNKLGIGQRDVIMLLLPNVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASG 131
           +ASGLNK+GI Q DVIML LP+ PEFV +FLGAS+RGAI TAANPF TPAE  K AKAS 
Sbjct: 62  VASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASR 121

Query: 132 AKLIITKASYVDKVKDLEE---VKIMCIDSPPDGCLHFSELTQADEKDLPHV-------- 180
           AKL+IT+A Y +KVKD      VK+MC+DS PDGCLHFSELTQADE + P V        
Sbjct: 122 AKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELTQADENEAPQVDISPDDVV 181

Query: 181 -------------GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSI 227
                        GVMLTHKGL+TSVAQQVDG+NPNLYF  ED ILCVLP+FHIYALNSI
Sbjct: 182 ALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSI 241

Query: 228 MLCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRI 287
           MLCGLR GA ILIM KFEI SLL LIE+YKV++APVVPP++++IAKSP+ +K+DLSS+R+
Sbjct: 242 MLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRM 301

Query: 288 LKSGAAPLGKELEDAVRIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVV 347
           +KSG APLGKELED VR K P A LGQGYGMTEAGPVLAMCL+FAKEPF+IK GACGTVV
Sbjct: 302 IKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVV 361

Query: 348 RNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEATKSTIDKEGWLHTGDIGYI 407
           RNAEMKIVDPETGASLP N+PGEICIRGDQIM GYLNDPEAT  TIDKEGWLHTGDIGYI
Sbjct: 362 RNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYI 421

Query: 408 DDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVV 467
           DD+DELFIVDRLKELIKYKGFQVAPAELEALL++H  I+DAAVV +KD+ AGEVPVAFVV
Sbjct: 422 DDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVV 481

Query: 468 KSNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAA 521
           KS  SQ TEDEIKQ+ISKQV+FYKRI RVFFI+AIPKAPSGKILRK L+ KLA 
Sbjct: 482 KSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG 535
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query525
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.94
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.58
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.57
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.31
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.2
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.18
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.53
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.53
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 91.95
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 84.62
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 81.68
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 80.17
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
Probab=100.00  E-value=3.3e-83  Score=659.27  Aligned_cols=509  Identities=76%  Similarity=1.196  Sum_probs=458.0

Q ss_pred             cccceeeccCCCCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCCeEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
Q 042783           13 QQEEIIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLP   92 (525)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~   92 (525)
                      ++++.++.++.++..+|.++|+.++|.++++++|+++|+++.++++++||+||.++++++|++|.++|+++||+|+++++
T Consensus         3 ~~~~~i~~~~~~~~~~p~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~   82 (536)
T 3ni2_A            3 PQEEFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLP   82 (536)
T ss_dssp             --CCCCBCCSSCCCCCCSSCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             cccceEEecCCCCCCCCCCCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Confidence            45678999999999999999999999999999999999999766799999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHHcCccEEEECccchHHHhcc---cCcEEEEecCCCC--------
Q 042783           93 NVPEFVFSFLGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDL---EEVKIMCIDSPPD--------  161 (525)
Q Consensus        93 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~~--------  161 (525)
                      |+++++++++||+++|++++|+++.++.+++.+++++++++++|++......+...   ....++.++....        
T Consensus        83 ~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (536)
T 3ni2_A           83 SSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSEL  162 (536)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTCEETHHH
T ss_pred             CcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCccCHHHH
Confidence            99999999999999999999999999999999999999999999998766554432   1334444432110        


Q ss_pred             -------------CCcccccccccCCCCCCCceeEcchHHHHHHHHHhhhcCCCCCccCCCcEEEEecchhhHHHHHHHH
Q 042783          162 -------------GCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIM  228 (525)
Q Consensus       162 -------------~~~~~~~~~~~~~~~~~~~~v~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~  228 (525)
                                   ...+...+..++++++.||||++||+++.+.+..........+++.++|++++.+|++|.+++...+
T Consensus       163 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~  242 (536)
T 3ni2_A          163 TQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIM  242 (536)
T ss_dssp             HTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTH
T ss_pred             hhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHH
Confidence                         1123345667788889999999999999998877665444456788999999999999999997778


Q ss_pred             HHHHHhCCeEEEecCCCHHHHHHHHHhcCceEeecchHHHHHHHcCCCCCCcCcccceeEeeecCCCcHHHHHHHHHHCC
Q 042783          229 LCGLRAGAAILIMQKFEINSLLQLIERYKVTVAPVVPPIVLAIAKSPETEKYDLSSIRILKSGAAPLGKELEDAVRIKLP  308 (525)
Q Consensus       229 ~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~  308 (525)
                      +.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.......++++||.+++||+++++++.+++++.+|
T Consensus       243 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~  322 (536)
T 3ni2_A          243 LCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFP  322 (536)
T ss_dssp             HHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCT
T ss_pred             HHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCC
Confidence            99999999999999999999999999999999999999999999988777778999999999999999999999999999


Q ss_pred             CCeeeccccccccccchhcccccCCCCcccCCCccccccCCceEEEEcCCCCCCCCCCCCeEEEEecccccccccCChhh
Q 042783          309 NAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPGEICIRGDQIMTGYLNDPEA  388 (525)
Q Consensus       309 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~  388 (525)
                      ++++++.||+||++.+++.+............+++|+|+++++++|+|++++++++.|+.|||+|+|+.++.||+++++.
T Consensus       323 ~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~  402 (536)
T 3ni2_A          323 QARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEA  402 (536)
T ss_dssp             TSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHH
T ss_pred             CCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhH
Confidence            99999999999999877655433344455678899999999999999988999999999999999999999999999999


Q ss_pred             hhcccCCCCceecCceEEEcCCCcEEEEccccceeeeCCeeeChHHHHHHHhcCCCcceEEEecccCCCCCCeEEEEEEe
Q 042783          389 TKSTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVVK  468 (525)
Q Consensus       389 ~~~~~~~~~~~~TgDl~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~  468 (525)
                      |...|+.+|||+|||+|++++||++++.||+||+||++|++|+|.+||++|.+||+|.+++|++++++..++.++++|+.
T Consensus       403 t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~  482 (536)
T 3ni2_A          403 TSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVK  482 (536)
T ss_dssp             HHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             HHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCCCCceeEEEEEe
Confidence            99999889999999999999999999999999999999999999999999999999999999999999889999999999


Q ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCccEEEEeccCCCCCCCcccHHHHHHHHHh
Q 042783          469 SNDSQITEDEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAA  521 (525)
Q Consensus       469 ~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKv~r~~l~~~~~~  521 (525)
                      .++...+.++++++++++|+.|++|..++++++||+|++||++|++|+++|++
T Consensus       483 ~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~~L~~~~~~  535 (536)
T 3ni2_A          483 SEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG  535 (536)
T ss_dssp             CTTCCCCHHHHHHHHHTTSCGGGCCSEEEECSCCCBCTTSCBCHHHHHTC---
T ss_pred             cCCCCCCHHHHHHHHHHhccCCccccEEEEEecCCCCCCCCeeHHHHHHHhcc
Confidence            88888899999999999999999999999999999999999999999998864
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 525
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-112
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-104
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-102
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 6e-94
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 1e-87
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 8e-77
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 5e-76
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  345 bits (887), Expect = e-112
 Identities = 108/541 (19%), Positives = 204/541 (37%), Gaps = 70/541 (12%)

Query: 48  RPCLI----NGSTGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSFLG 103
           R  +I    + S     +Y E+     + A+ L  LGI + DV+ + +P VPE   + L 
Sbjct: 88  RTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLA 147

Query: 104 ASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKVKDLEEVKIMC-------- 155
            +  GA+ +     F+P         S ++L+IT    V   + +   K +         
Sbjct: 148 CARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNV 207

Query: 156 ---------------IDSPPDGCLHFSELTQADEKDLPHV-------------------- 180
                          ID      L + +L +    +                        
Sbjct: 208 TSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKP 267

Query: 181 -GVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLPLFHIYALNSIMLCGLRAGAAIL 239
            GV+ T  G +   A           +   D   C   +  +   + ++   L  GA  L
Sbjct: 268 KGVLHTTGGYLVYAATTFK---YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTL 324

Query: 240 IMQKFE----INSLLQLIERYKVTVAPVVPPIVLAIAKSPET--EKYDLSSIRILKSGAA 293
           + +          + Q++++++V +    P  + A+    +   E  D SS+RIL S   
Sbjct: 325 MFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGE 384

Query: 294 PLGKELEDAV--RIKLPNAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAE 351
           P+  E  +    +I      +   +  TE G  +   L       E+KAG+        +
Sbjct: 385 PINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLP---GAIELKAGSATRPFFGVQ 441

Query: 352 MKIVDPETGASLPTNKPGEICIRGDQ--IMTGYLNDPEATKSTIDK--EGWLHTGDIGYI 407
             +VD E G        G + I             D E  + T     +    +GD    
Sbjct: 442 PALVDNE-GHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARR 500

Query: 408 DDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSITDAAVVPMKDDAAGEVPVAFVV 467
           D++   +I  R+ +++   G ++  AE+E+ L++H  I +AAVV +     G+   A+V 
Sbjct: 501 DEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVT 560

Query: 468 KSNDSQITED---EIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAADYQ 524
            ++  + + +   E++ ++ K++      + + + D++PK  SGKI+R+ LR   A D  
Sbjct: 561 LNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS 620

Query: 525 N 525
           N
Sbjct: 621 N 621
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query525
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 84.59
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 80.42
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=1.9e-74  Score=601.82  Aligned_cols=489  Identities=21%  Similarity=0.296  Sum_probs=413.8

Q ss_pred             CCCCCCCHHH-HHHhhhccCCCccEEEeCC----CCCeEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCchhHHHHH
Q 042783           27 YIPKHLPLHS-YCFENISKVASRPCLINGS----TGDVYTYGEVELTARKIASGLNKLGIGQRDVIMLLLPNVPEFVFSF  101 (525)
Q Consensus        27 ~~~~~~~l~~-~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~  101 (525)
                      .....+|+.+ .|+++++.+||++|+++..    +.+++||+||+++++++|++|+++|+++||+|+++++|++++++++
T Consensus        66 f~~~~~N~~~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~  145 (643)
T d1pg4a_          66 YEDGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAM  145 (643)
T ss_dssp             STTCEECHHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHH
T ss_pred             CCCChhhHHHHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHH
Confidence            3455678875 5558888999999998532    2278999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCeEeecCCCCCHHHHHHHHHHcCccEEEECccchHHH-------------hc--ccC-cEEEEecCCCC----
Q 042783          102 LGASYRGAIATAANPFFTPAETCKQAKASGAKLIITKASYVDKV-------------KD--LEE-VKIMCIDSPPD----  161 (525)
Q Consensus       102 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~-------------~~--~~~-~~~~~~~~~~~----  161 (525)
                      |||+++|++++|+++.++.+++.+++++++++++|+++......             ..  ... ..++.......    
T Consensus       146 lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~  225 (643)
T d1pg4a_         146 LACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW  225 (643)
T ss_dssp             HHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC
T ss_pred             HHHHHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc
Confidence            99999999999999999999999999999999999976532111             10  111 12222221100    


Q ss_pred             ------------------------CCcccccccccCCCCCCCceeEcchHHHHHHHHHhhhcCCCCCccCCCcEEEEecc
Q 042783          162 ------------------------GCLHFSELTQADEKDLPHVGVMLTHKGLVTSVAQQVDGENPNLYFTKEDAILCVLP  217 (525)
Q Consensus       162 ------------------------~~~~~~~~~~~~~~~~~~~~v~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p  217 (525)
                                              ...+...+..++++++.||||+++|++++.........   .++++++|++++.+|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~---~~~~~~~d~~~~~~p  302 (643)
T d1pg4a_         226 QEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKY---VFDYHPGDIYWCTAD  302 (643)
T ss_dssp             CBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHH---HTTCCTTCEEEECSC
T ss_pred             ccccchhhhhhhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHH---hhCCCCCCEEEEeCC
Confidence                                    01122346667888999999999999977655443321   245789999999999


Q ss_pred             hhhHHHHHHHHHHHHHhCCeEEEecC----CCHHHHHHHHHhcCceEeecchHHHHHHHcCCCC--CCcCcccceeEeee
Q 042783          218 LFHIYALNSIMLCGLRAGAAILIMQK----FEINSLLQLIERYKVTVAPVVPPIVLAIAKSPET--EKYDLSSIRILKSG  291 (525)
Q Consensus       218 l~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~g  291 (525)
                      ++|++|+...++.+|+.|+++++.+.    +++..+++.++++++|++.++|++++.|++....  ...++++||.+++|
T Consensus       303 ~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~  382 (643)
T d1pg4a_         303 VGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSV  382 (643)
T ss_dssp             TTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEE
Confidence            99999987778899999999999764    4889999999999999999999999999887542  35578999999999


Q ss_pred             cCCCcHHHHHHHHHHCC--CCeeeccccccccccchhcccccCCCCcccCCCccccccCCceEEEEcCCCCCCCCCCCCe
Q 042783          292 AAPLGKELEDAVRIKLP--NAILGQGYGMTEAGPVLAMCLSFAKEPFEIKAGACGTVVRNAEMKIVDPETGASLPTNKPG  369 (525)
Q Consensus       292 G~~l~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~~~~~~~~~~~g~~G  369 (525)
                      |+++++++++++.+.++  ++.+++.||+||++..++..   .......+.+++|+|++|++++++| +++++++.|+.|
T Consensus       383 G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~---~~~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~~~g~~G  458 (643)
T d1pg4a_         383 GEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITP---LPGAIELKAGSATRPFFGVQPALVD-NEGHPQEGATEG  458 (643)
T ss_dssp             SSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCC---CTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSEEE
T ss_pred             eCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEec---CCCccCCCCCccccccCCCEEEEEC-CCCCCCCCCceE
Confidence            99999999999999883  57899999999998766542   1223345678999999999999999 679999999999


Q ss_pred             EEEEec--ccccccccCChhhhhccc--CCCCceecCceEEEcCCCcEEEEccccceeeeCCeeeChHHHHHHHhcCCCc
Q 042783          370 EICIRG--DQIMTGYLNDPEATKSTI--DKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEALLLSHSSI  445 (525)
Q Consensus       370 el~v~g--~~~~~gy~~~~~~~~~~~--~~~~~~~TgDl~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v  445 (525)
                      ||+|+|  |.++.|||++++.+...+  ..+|||+|||+|++|+||+|++.||+||+||++|++|+|.+||++|.+||+|
T Consensus       459 el~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V  538 (643)
T d1pg4a_         459 NLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKI  538 (643)
T ss_dssp             EEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTE
T ss_pred             EEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCc
Confidence            999999  568899999988776543  3589999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecccCCCCCCeEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCCccEEEEeccCCCCCCCcccHHHHHHHHHhh
Q 042783          446 TDAAVVPMKDDAAGEVPVAFVVKSNDSQITE---DEIKQFISKQVVFYKRINRVFFIDAIPKAPSGKILRKELRAKLAAD  522 (525)
Q Consensus       446 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKv~r~~l~~~~~~~  522 (525)
                      .+|+|++++++..|+.+++||++.++...+.   ++|+++|+++|+++++|..|+++++||+|++||++|++|+++++.+
T Consensus       539 ~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~  618 (643)
T d1pg4a_         539 AEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD  618 (643)
T ss_dssp             EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred             ceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcCC
Confidence            9999999999988999999999998877765   4899999999999999999999999999999999999999999764
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure